Cp4.1LG15g00690 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g00690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain protein
LocationCp4.1LG15 : 496207 .. 497773 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGCTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTGTGTTGCCCATATTTTTGCTCTCCAACAACAGGTAATTTTGAATATGAATGCAAGATTATGTTTTTGAGGGTTCGGGAAACCTGATCAACCCAATTCAAGCTAAGCTATATGGTTTGGGTTGAGTTACGAACTTGTTTGAATTATTTGAATTGGGTTCAGTTTCAAATAGATGAATATTTTACTGATTGAATTGAATTGATTCATGAGTTTCTTTAAAACTAGATAGGATTGTGAGATCACACGTGGGTTAGAGAGAGGAACGAAACATTCCTTGTAAGTGTAACATCTCGAACCAATCACTAGTAGATATTGTCCGTTTTAGCATGTTACGTATTGTCATCAGTCTCATTGGTCTTCGTAACCCTTTCCAACCAATGTGAGATCTCACTATCCACCCCCTTGGGGGTCTAGCGTCCTGGCTAGCACACCGCCCAATATCTGACTCTGATACCATTTGTAACATCTCAAGCCCACCGCTAACAGATATTGTCCATTTCATTTTGTTACGTATGGTCGTCAACCTCACAGTTTTTAAACGCATCTACTAGGGAAAGATTTTCACAACCTTATAAGAAATGTTTCGTTTCTCTTTCCAACTGATGTGAGATCTCACAACAAGGATATGAAAACCTCTTCTTAGCAGACACGTTTTTTCGTGAGATCGAGAACCAAATCGGACAATATCCGCTAGCTGTGGTCTTTGGACAAAGAAAATTTCAAATGAATAACCTTAATAACTCAAACTAACCTAACAAATTGAGTTGAGTTCATTATTTAAGAAGAGTAATCTAGATTGAAAAAATTATCAAATCTAACAATTGAATTAGGTCAAAAAGTCTCAATCTGACTCAACCGAACCCACGAACACCCTTTTTAAAATCCTTAAAATGGGGTTTTGTTTGTTGTTGTTGATTTTGAAGGTGGCATACTTACAAGCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGAATCAGGAGGCAACATGGAGCTTCAATGGACAGGGAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAACCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCATGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA

mRNA sequence

ATGGCGTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGCTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGAATCAGGAGGCAACATGGAGCTTCAATGGACAGGGAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAACCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCATGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA

Coding sequence (CDS)

ATGGCGTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGCTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGAATCAGGAGGCAACATGGAGCTTCAATGGACAGGGAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAACCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCATGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA

Protein sequence

MASSSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYGSQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN
Homology
[Close]
BLAST of Cp4.1LG15g00690 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-41
Identity = 116/241 (48.13%), Postives = 137/241 (56.85%), Query Frame = 1 

Query: 21  GGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHV 80
           G G   G GSPCGACKFLRRKC ++CIFAPYFSSEQGAARFAA+HKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 81  PAHDRCEAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQTLMESG 140
           P HDRCEAVVTIAYEAQAR+ DPVYG                SQ+MQ KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 141 GNME---------LQWT-------GSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANN 200
           G++          + W        GS  +   N     Y     N  VSPQSS+E + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 201 DA------ALMFMNHYQ--------------ESQTLARRRSASCHGDLGELQALALRMMR 210
            +      A +   H+Q              E     +R  + C  DLGELQALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

[Close]
BLAST of Cp4.1LG15g00690 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 9.8e-32
Identity = 77/111 (69.37%), Postives = 83/111 (74.77%), Query Frame = 1 

Query: 6   SSSSTANSSVSGGGGGGGGGG----------GGGSPCGACKFLRRKCVAECIFAPYFSSE 65
           S      ++V GGGGG GGGG          GGG PCGACKFLRRKCV  CIFAPYF SE
Sbjct: 2   SGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSE 61

Query: 66  QGAARFAAVHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYG 107
           QG+A FAAVHKVFGASNVSKLLLH+P H R +AVVTI YEAQARI DP+YG
Sbjct: 62  QGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYG 112

[Close]
BLAST of Cp4.1LG15g00690 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 68/92 (73.91%), Postives = 74/92 (80.43%), Query Frame = 1 

Query: 15  VSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVS 74
           +S  G      GGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAAVHKVFGASNVS
Sbjct: 1   MSSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 60

Query: 75  KLLLHVPAHDRCEAVVTIAYEAQARILDPVYG 107
           KLL HVP H R +AVV+I +EAQAR+ DP+YG
Sbjct: 61  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYG 92

[Close]
BLAST of Cp4.1LG15g00690 vs. Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 1 

Query: 29  GSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPAHDRCEA 88
           GSPCGACKFLRRKC   C+FAPYF  EQGA+ FAA+HKVFGASN SKLL H+P  DRCEA
Sbjct: 9   GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEA 68

Query: 89  VVTIAYEAQARILDPVYG 107
            +TI+YEAQAR+ DP+YG
Sbjct: 69  AITISYEAQARLQDPIYG 86

[Close]
BLAST of Cp4.1LG15g00690 vs. Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-29
Identity = 70/108 (64.81%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 19  GGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLL 78
           G   GGG GG  PCGACKFLRRKCV  C+FAPYF +EQG ARFAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 79  HVPAHDRCEAVVTIAYEAQARILDPVYGS---------QLMQAKAQLA 118
            +P H R +AVVT+ YEA ARI DPVYGS         Q+M  +A+LA
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELA 111

[Close]
BLAST of Cp4.1LG15g00690 vs. TrEMBL
Match: A0A0A0LAE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G398920 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 7.0e-69
Identity = 164/241 (68.05%), Postives = 182/241 (75.52%), Query Frame = 1 

Query: 4   SSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAA 63
           +SSSS++ N+S+SGGGGG G GGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA
Sbjct: 2   ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 61

Query: 64  VHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYG----------------S 123
           +HKVFGASNVSKLLLHVP HDRCEAVVTIAYEAQARI DPVYG                +
Sbjct: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121

Query: 124 QLMQAKAQLAQTLMESGGNMELQWTGSF-NNNLSNG-IPS-NYETQIMNPAVSPQSSVES 183
           QLM AKAQLA+TLM+SG NME+QWTG F NNNLSNG IPS NY+TQI N   SPQSS+ES
Sbjct: 122 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP-SPQSSLES 181

Query: 184 AANNDAALMFMNH------------YQESQTL----ARRRSASCHGDLGELQALALRMMR 210
           AANND AL+F+N              QE Q L     ++  +S H DLGEL ALALRMMR
Sbjct: 182 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 241

[Close]
BLAST of Cp4.1LG15g00690 vs. TrEMBL
Match: I1N9P5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G162900 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.7e-49
Identity = 128/213 (60.09%), Postives = 148/213 (69.48%), Query Frame = 1 

Query: 21  GGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHV 80
           G GG  G GSPCGACKFLRRKC A+CIFAPYF SEQG ARFAA+HKVFGASNVSKLLLH+
Sbjct: 6   GNGGSNGTGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHI 65

Query: 81  PAHDRCEAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQTLMESG 140
           PAHDRCEAVVTIAYEAQARI DPVYG                +QLMQ KAQLAQ L+ES 
Sbjct: 66  PAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNLVES- 125

Query: 141 GNMEL--QWTGSFNNNLSNGIPSNYE--TQIMNPAVSPQSSVE----SAANNDAALMFMN 200
            N+E   QWTG  NNN  +G P N+      MNP +SPQSS+E    S+ N+  ++  + 
Sbjct: 126 RNIESNHQWTG--NNNSVSGQPMNHPFCPTYMNP-ISPQSSLESIDHSSINDGMSMQDIQ 185

Query: 201 HYQESQTLARRRSASCHGDLGELQALALRMMRN 210
             ++ Q  A+ R  + + DLGELQ LALRMMRN
Sbjct: 186 SREDFQIQAKERPYN-NNDLGELQELALRMMRN 213

[Close]
BLAST of Cp4.1LG15g00690 vs. TrEMBL
Match: A0A0B2P4D3_GLYSO (LOB domain-containing protein 16 OS=Glycine soja GN=glysoja_002546 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.7e-49
Identity = 128/213 (60.09%), Postives = 148/213 (69.48%), Query Frame = 1 

Query: 21  GGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHV 80
           G GG  G GSPCGACKFLRRKC A+CIFAPYF SEQG ARFAA+HKVFGASNVSKLLLH+
Sbjct: 6   GNGGSNGTGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHI 65

Query: 81  PAHDRCEAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQTLMESG 140
           PAHDRCEAVVTIAYEAQARI DPVYG                +QLMQ KAQLAQ L+ES 
Sbjct: 66  PAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNLVES- 125

Query: 141 GNMEL--QWTGSFNNNLSNGIPSNYE--TQIMNPAVSPQSSVE----SAANNDAALMFMN 200
            N+E   QWTG  NNN  +G P N+      MNP +SPQSS+E    S+ N+  ++  + 
Sbjct: 126 RNIESNHQWTG--NNNSVSGQPMNHPFCPTYMNP-ISPQSSLESIDHSSINDGMSMQDIQ 185

Query: 201 HYQESQTLARRRSASCHGDLGELQALALRMMRN 210
             ++ Q  A+ R  + + DLGELQ LALRMMRN
Sbjct: 186 SREDFQIQAKERPYN-NNDLGELQELALRMMRN 213

[Close]
BLAST of Cp4.1LG15g00690 vs. TrEMBL
Match: A0A061DWW2_THECC (Lateral organ boundaries-domain 16 OS=Theobroma cacao GN=TCM_004106 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-48
Identity = 126/208 (60.58%), Postives = 140/208 (67.31%), Query Frame = 1 

Query: 23  GGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPA 82
           G     GSPCGACKFLRRKC ++CIFAPYF SEQG ARFAA+HKVFGASNVSKLLLH+PA
Sbjct: 5   GSATATGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPA 64

Query: 83  HDRCEAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQTLMESGGN 142
           HDRCEAVVTIAYEAQARI DPVYG                +QLMQ KAQLAQ  M S  N
Sbjct: 65  HDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVKAQLAQNAMNS-HN 124

Query: 143 MELQWTGSFNNNLSNGIPS--NYETQIMNPAVSPQSSVESAANNDAALMFMNHYQESQTL 202
           +E QW G    NLS G+PS   Y +  MNP +SPQSS+ES   N A  M M   Q     
Sbjct: 125 IESQWQG----NLS-GLPSIPTYPS-YMNP-ISPQSSLESVELNSADSMNMQEIQSRDEF 184

Query: 203 ARR---RSASCHGDLGELQALALRMMRN 210
           + +   +   C+ DLGELQALALRMMRN
Sbjct: 185 SFQGYPKKRPCNSDLGELQALALRMMRN 204

[Close]
BLAST of Cp4.1LG15g00690 vs. TrEMBL
Match: A0A0D2P8Y0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G144400 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.0e-48
Identity = 122/203 (60.10%), Postives = 132/203 (65.02%), Query Frame = 1 

Query: 27  GGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPAHDRC 86
           G GSPCGACKFLRRKC ++CIFAPYF SEQG ARFAA+HKVFGASN SKLLLH+PAHDRC
Sbjct: 5   GTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNASKLLLHIPAHDRC 64

Query: 87  EAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQTLMESGGNMELQ 146
           EAVVTIAYEAQARI DPVYG                 QLMQ KAQLAQ  M S  NME Q
Sbjct: 65  EAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQGQLMQMKAQLAQNAMNS-HNMESQ 124

Query: 147 WTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANNDAALMFMNHYQESQTLAR---- 206
           W G    NLS G         MNP +SPQSS+ES   N A  + M   Q  +  +     
Sbjct: 125 WQG----NLSGGPSIPTYPIYMNP-ISPQSSLESVELNSADNLNMQEIQSREEFSNFHGY 184

Query: 207 RRSASCHGDLGELQALALRMMRN 210
            R    + DLGELQALALRMMRN
Sbjct: 185 SRKRPYNSDLGELQALALRMMRN 201

[Close]
BLAST of Cp4.1LG15g00690 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16)

HSP 1 Score: 168.7 bits (426), Expect = 3.8e-42
Identity = 116/241 (48.13%), Postives = 137/241 (56.85%), Query Frame = 1 

Query: 21  GGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHV 80
           G G   G GSPCGACKFLRRKC ++CIFAPYFSSEQGAARFAA+HKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 81  PAHDRCEAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQTLMESG 140
           P HDRCEAVVTIAYEAQAR+ DPVYG                SQ+MQ KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 141 GNME---------LQWT-------GSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANN 200
           G++          + W        GS  +   N     Y     N  VSPQSS+E + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 201 DA------ALMFMNHYQ--------------ESQTLARRRSASCHGDLGELQALALRMMR 210
            +      A +   H+Q              E     +R  + C  DLGELQALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

[Close]
BLAST of Cp4.1LG15g00690 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 138.3 bits (347), Expect = 5.5e-33
Identity = 77/111 (69.37%), Postives = 83/111 (74.77%), Query Frame = 1 

Query: 6   SSSSTANSSVSGGGGGGGGGG----------GGGSPCGACKFLRRKCVAECIFAPYFSSE 65
           S      ++V GGGGG GGGG          GGG PCGACKFLRRKCV  CIFAPYF SE
Sbjct: 2   SGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSE 61

Query: 66  QGAARFAAVHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYG 107
           QG+A FAAVHKVFGASNVSKLLLH+P H R +AVVTI YEAQARI DP+YG
Sbjct: 62  QGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYG 112

[Close]
BLAST of Cp4.1LG15g00690 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 131.3 bits (329), Expect = 6.7e-31
Identity = 68/92 (73.91%), Postives = 74/92 (80.43%), Query Frame = 1 

Query: 15  VSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVS 74
           +S  G      GGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAAVHKVFGASNVS
Sbjct: 1   MSSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 60

Query: 75  KLLLHVPAHDRCEAVVTIAYEAQARILDPVYG 107
           KLL HVP H R +AVV+I +EAQAR+ DP+YG
Sbjct: 61  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYG 92

[Close]
BLAST of Cp4.1LG15g00690 vs. TAIR10
Match: AT3G58190.1 (AT3G58190.1 lateral organ boundaries-domain 29)

HSP 1 Score: 131.0 bits (328), Expect = 8.8e-31
Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 1 

Query: 29  GSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPAHDRCEA 88
           GSPCGACKFLRRKC   C+FAPYF  EQGA+ FAA+HKVFGASN SKLL H+P  DRCEA
Sbjct: 9   GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDRCEA 68

Query: 89  VVTIAYEAQARILDPVYG 107
            +TI+YEAQAR+ DP+YG
Sbjct: 69  AITISYEAQARLQDPIYG 86

[Close]
BLAST of Cp4.1LG15g00690 vs. TAIR10
Match: AT2G45410.1 (AT2G45410.1 LOB domain-containing protein 19)

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-30
Identity = 70/108 (64.81%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 19  GGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLL 78
           G   GGG GG  PCGACKFLRRKCV  C+FAPYF +EQG ARFAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 79  HVPAHDRCEAVVTIAYEAQARILDPVYGS---------QLMQAKAQLA 118
            +P H R +AVVT+ YEA ARI DPVYGS         Q+M  +A+LA
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELA 111

[Close]
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: gi|700202801|gb|KGN57934.1| (hypothetical protein Csa_3G398920 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 1.0e-68
Identity = 164/241 (68.05%), Postives = 182/241 (75.52%), Query Frame = 1 

Query: 4   SSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAA 63
           +SSSS++ N+S+SGGGGG G GGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA
Sbjct: 2   ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 61

Query: 64  VHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYG----------------S 123
           +HKVFGASNVSKLLLHVP HDRCEAVVTIAYEAQARI DPVYG                +
Sbjct: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121

Query: 124 QLMQAKAQLAQTLMESGGNMELQWTGSF-NNNLSNG-IPS-NYETQIMNPAVSPQSSVES 183
           QLM AKAQLA+TLM+SG NME+QWTG F NNNLSNG IPS NY+TQI N   SPQSS+ES
Sbjct: 122 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP-SPQSSLES 181

Query: 184 AANNDAALMFMNH------------YQESQTL----ARRRSASCHGDLGELQALALRMMR 210
           AANND AL+F+N              QE Q L     ++  +S H DLGEL ALALRMMR
Sbjct: 182 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 241

[Close]
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: gi|659123856|ref|XP_008461877.1| (PREDICTED: LOB domain-containing protein 16 [Cucumis melo])

HSP 1 Score: 264.2 bits (674), Expect = 1.9e-67
Identity = 162/240 (67.50%), Postives = 181/240 (75.42%), Query Frame = 1 

Query: 4   SSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAA 63
           +SSSS++ N+SVS    G GG GGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA
Sbjct: 2   ASSSSTSTNTSVS----GCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 61

Query: 64  VHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYG----------------S 123
           +HKVFGASNVSKLLLHVP HDRCEAVVTIAYEAQARI DPVYG                +
Sbjct: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121

Query: 124 QLMQAKAQLAQTLMESGGNMELQWTGSFNN-NLSNG-IP-SNYETQIMNPAVSPQSSVES 183
           QLMQAKAQLAQTLM+SG NME+QWTG FNN NLSNG IP +NY+TQIMN   +PQSS+ES
Sbjct: 122 QLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP-TPQSSLES 181

Query: 184 AANNDAALMFMNH---YQES------------QTLARRRSASCHGDLGELQALALRMMRN 210
           AANND AL+F+N    + ES            Q   R++ +S H DLGEL ALALRMMRN
Sbjct: 182 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

[Close]
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: gi|449468656|ref|XP_004152037.1| (PREDICTED: LOB domain-containing protein 16 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 5.5e-67
Identity = 158/230 (68.70%), Postives = 172/230 (74.78%), Query Frame = 1 

Query: 15  VSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVS 74
           +SGGGGG G GGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA+HKVFGASNVS
Sbjct: 1   MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 60

Query: 75  KLLLHVPAHDRCEAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQ 134
           KLLLHVP HDRCEAVVTIAYEAQARI DPVYG                +QLM AKAQLA+
Sbjct: 61  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE 120

Query: 135 TLMESGGNMELQWTGSF-NNNLSNG-IPS-NYETQIMNPAVSPQSSVESAANNDAALMFM 194
           TLM+SG NME+QWTG F NNNLSNG IPS NY+TQI N   SPQSS+ESAANND AL+F+
Sbjct: 121 TLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP-SPQSSLESAANNDEALLFI 180

Query: 195 NH------------YQESQTL----ARRRSASCHGDLGELQALALRMMRN 210
           N              QE Q L     ++  +S H DLGEL ALALRMMRN
Sbjct: 181 NQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 229

[Close]
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: gi|1021522675|ref|XP_016204734.1| (PREDICTED: LOB domain-containing protein 16-like [Arachis ipaensis])

HSP 1 Score: 206.1 bits (523), Expect = 6.1e-50
Identity = 130/226 (57.52%), Postives = 147/226 (65.04%), Query Frame = 1 

Query: 20  GGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLH 79
           G G   GG GSPCGACKFLRRKC A+CIFAPYF SEQG ARFAA+HKVFGASNVSKLLLH
Sbjct: 6   GNGTSSGGSGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLH 65

Query: 80  VPAHDRCEAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQTLMES 139
           +PAHDRCEAVVTIAYEAQARI DPVYG                +QLMQ KAQLAQ  MES
Sbjct: 66  IPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNQMES 125

Query: 140 GGNMELQWTGSFNNNLSNGIPSNY-ETQIMNPAVSPQSSVES-----------AANN--- 199
             N+E QW G+    ++N   + +  T  MNP +SPQSS+ES            ANN   
Sbjct: 126 CRNIENQWPGNVGGAINNNNNNPFGHTNYMNPPISPQSSLESIDHHSSSIIDGVANNNMH 185

Query: 200 DAALMFMNHYQESQTLA--RRRS---ASCHGDLGELQALALRMMRN 210
           D      N +Q+ Q  A  +RRS    + + DLGELQ LALRMMRN
Sbjct: 186 DTRPEDFNSFQQQQQQASSKRRSYNNNNNNNDLGELQELALRMMRN 231

[Close]
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: gi|356572251|ref|XP_003554283.1| (PREDICTED: LOB domain-containing protein 16-like [Glycine max])

HSP 1 Score: 202.6 bits (514), Expect = 6.8e-49
Identity = 128/213 (60.09%), Postives = 148/213 (69.48%), Query Frame = 1 

Query: 21  GGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHV 80
           G GG  G GSPCGACKFLRRKC A+CIFAPYF SEQG ARFAA+HKVFGASNVSKLLLH+
Sbjct: 6   GNGGSNGTGSPCGACKFLRRKCAADCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHI 65

Query: 81  PAHDRCEAVVTIAYEAQARILDPVYG----------------SQLMQAKAQLAQTLMESG 140
           PAHDRCEAVVTIAYEAQARI DPVYG                +QLMQ KAQLAQ L+ES 
Sbjct: 66  PAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQVKAQLAQNLVES- 125

Query: 141 GNMEL--QWTGSFNNNLSNGIPSNYE--TQIMNPAVSPQSSVE----SAANNDAALMFMN 200
            N+E   QWTG  NNN  +G P N+      MNP +SPQSS+E    S+ N+  ++  + 
Sbjct: 126 RNIESNHQWTG--NNNSVSGQPMNHPFCPTYMNP-ISPQSSLESIDHSSINDGMSMQDIQ 185

Query: 201 HYQESQTLARRRSASCHGDLGELQALALRMMRN 210
             ++ Q  A+ R  + + DLGELQ LALRMMRN
Sbjct: 186 SREDFQIQAKERPYN-NNDLGELQELALRMMRN 213

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g00690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD16_ARATH6.8e-4148.13LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1[more]
LBD18_ARATH9.8e-3269.37LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD30_ARATH1.2e-2973.91LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1[more]
LBD29_ARATH1.6e-2974.36LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1[more]
LBD19_ARATH3.5e-2964.81LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1[more]
BLAST of Cp4.1LG15g00690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAE8_CUCSA7.0e-6968.05Uncharacterized protein OS=Cucumis sativus GN=Csa_3G398920 PE=4 SV=1[more]
I1N9P5_SOYBN4.7e-4960.09Uncharacterized protein OS=Glycine max GN=GLYMA_19G162900 PE=4 SV=1[more]
A0A0B2P4D3_GLYSO4.7e-4960.09LOB domain-containing protein 16 OS=Glycine soja GN=glysoja_002546 PE=4 SV=1[more]
A0A061DWW2_THECC4.0e-4860.58Lateral organ boundaries-domain 16 OS=Theobroma cacao GN=TCM_004106 PE=4 SV=1[more]
A0A0D2P8Y0_GOSRA4.0e-4860.10Uncharacterized protein OS=Gossypium raimondii GN=B456_007G144400 PE=4 SV=1[more]
BLAST of Cp4.1LG15g00690 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42430.13.8e-4248.13 lateral organ boundaries-domain 16[more]
AT2G45420.15.5e-3369.37 LOB domain-containing protein 18[more]
AT4G00220.16.7e-3173.91 Lateral organ boundaries (LOB) domain family protein[more]
AT3G58190.18.8e-3174.36 lateral organ boundaries-domain 29[more]
AT2G45410.12.0e-3064.81 LOB domain-containing protein 19[more]
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202801|gb|KGN57934.1|1.0e-6868.05hypothetical protein Csa_3G398920 [Cucumis sativus][more]
gi|659123856|ref|XP_008461877.1|1.9e-6767.50PREDICTED: LOB domain-containing protein 16 [Cucumis melo][more]
gi|449468656|ref|XP_004152037.1|5.5e-6768.70PREDICTED: LOB domain-containing protein 16 [Cucumis sativus][more]
gi|1021522675|ref|XP_016204734.1|6.1e-5057.52PREDICTED: LOB domain-containing protein 16-like [Arachis ipaensis][more]
gi|356572251|ref|XP_003554283.1|6.8e-4960.09PREDICTED: LOB domain-containing protein 16-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g00690.1Cp4.1LG15g00690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 31..114
score: 2.0
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 30..132
score: 19
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 4..209
score: 2.0
NoneNo IPR availablePANTHERPTHR31529:SF10LOB DOMAIN-CONTAINING PROTEIN 16coord: 4..209
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g00690Cucsa.053440Cucumber (Gy14) v1cgycpeB0058
Cp4.1LG15g00690CmaCh19G000790Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g00690CmaCh02G017560Cucurbita maxima (Rimu)cmacpeB615
Cp4.1LG15g00690CmoCh02G018010Cucurbita moschata (Rifu)cmocpeB564
Cp4.1LG15g00690CmoCh19G000890Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g00690Cla005993Watermelon (97103) v1cpewmB257
Cp4.1LG15g00690Csa3G398920Cucumber (Chinese Long) v2cpecuB244
Cp4.1LG15g00690ClCG07G000920Watermelon (Charleston Gray)cpewcgB240
Cp4.1LG15g00690CSPI03G22860Wild cucumber (PI 183967)cpecpiB247
Cp4.1LG15g00690Lsi05G010030Bottle gourd (USVL1VR-Ls)cpelsiB209
Cp4.1LG15g00690MELO3C012908.2Melon (DHL92) v3.6.1cpemedB270
Cp4.1LG15g00690CsaV3_3G022570Cucumber (Chinese Long) v3cpecucB0304
Cp4.1LG15g00690Bhi05G000165Wax gourdcpewgoB0327
Cp4.1LG15g00690CsGy3G021850Cucumber (Gy14) v2cgybcpeB338
Cp4.1LG15g00690Carg08972Silver-seed gourdcarcpeB1094
Cp4.1LG15g00690Carg16869Silver-seed gourdcarcpeB1057
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g00690Cp4.1LG05g01380Cucurbita pepo (Zucchini)cpecpeB273
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g00690Cucumber (Chinese Long) v2cpecuB237
Cp4.1LG15g00690Bottle gourd (USVL1VR-Ls)cpelsiB193
Cp4.1LG15g00690Watermelon (Charleston Gray)cpewcgB238
Cp4.1LG15g00690Watermelon (97103) v1cpewmB262
Cp4.1LG15g00690Watermelon (97103) v1cpewmB271
Cp4.1LG15g00690Cucumber (Gy14) v2cgybcpeB191
Cp4.1LG15g00690Melon (DHL92) v3.6.1cpemedB275
Cp4.1LG15g00690Melon (DHL92) v3.6.1cpemedB283
Cp4.1LG15g00690Silver-seed gourdcarcpeB0332
Cp4.1LG15g00690Silver-seed gourdcarcpeB1329
Cp4.1LG15g00690Silver-seed gourdcarcpeB1502
Cp4.1LG15g00690Cucumber (Chinese Long) v3cpecucB0295
Cp4.1LG15g00690Cucumber (Chinese Long) v3cpecucB0305
Cp4.1LG15g00690Cucurbita pepo (Zucchini)cpecpeB257
Cp4.1LG15g00690Cucurbita pepo (Zucchini)cpecpeB265
Cp4.1LG15g00690Cucurbita pepo (Zucchini)cpecpeB284
Cp4.1LG15g00690Cucumber (Gy14) v1cgycpeB1008
Cp4.1LG15g00690Cucurbita maxima (Rimu)cmacpeB912
Cp4.1LG15g00690Cucurbita moschata (Rifu)cmocpeB849
Cp4.1LG15g00690Wild cucumber (PI 183967)cpecpiB241