CSPI03G22860 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G22860
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionLOB domain-containing protein, putative
LocationChr3 : 19591944 .. 19593449 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGGTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGTCAATCATTTTGTTTTTCTTTAGTTATCATCACTTATTAGCTCGATCAGATTCATTGTCGTTTAATTTTCTGGTGATGAATGATTAAGAATATGAATAAAAGATCTGTTTTTTTAGGCTAGCTCTGTTTGAGTTTTTAATATTAAAAACCTAACAATATAACTATTTAATTCATTTGTGAATTTCCTGGTTTCGTTATTTGATTTAATTTATTTAGGCCATTTTTCAAAAGTAAAATTAAAGTTTCATAATTTCAAAGTGAAAAAAATGAGAATTAATTGTGCTGTTCTTTAAATTTAGCTAAGAATTTGAAATGTTTTTCCCCTTCGAATAAGACTAATTAAAACCTTGTAGAACAAGGGTGAAAAAACAAATAGAAACAGAAAATTTAAAAACAAATGATAGTTAATTGGAGCCTAAAAGTTAGATTAATTTTTTTATAACCCATACAAATTTTTTTAGCTTAGTGGCGATCGTCTATTGAAAAACTACACAACAATAATTTTTTGTTTTGCTGTTTGTTTTCATTGTGAAAGCCAAAGAAAAAAAGAAAAAAAAAATCATATTGGAGATGCAAAATTTCACCTGATTAATCCATTAATCTAAGTGAGAACTTTAAAAGCATCAACTTTTTAATCTATAAAACAAGTCCTCTCTTTTCTTTTCTCACGCGATTCAAGGTTAGTTTGAATTGTCTTTTAATCAAACTTCGAGACAAACAGACGTTCTGAATTACAAGTTTGAACTGAAGGAATTTATTTATTTTTGGTTTTTGAAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAATTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAA

mRNA sequence

ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGGTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAATTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAA

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGGTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAATTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAA
Homology
[Close]
BLAST of CSPI03G22860 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 8.9e-53
Identity = 132/241 (54.77%), Postives = 160/241 (66.39%), Query Frame = 1 

Query: 19  GSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHV 78
           G+G+  G GSPCGACK LRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 79  PVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDS- 138
           P+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+M  KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 139 --------GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQI----TNNP-SPQSSLESAANN 198
                    +N  + W     +   S  S P N++Q        NNP SPQSSLE + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 199 --DEALLFINQNQLFHESQLSRSSQEP-QFLQPFPRKKLP-SSSHADLGELHALALRMMR 242
              +     N  +  H++       +   F + +P KK   S   +DLGEL ALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

[Close]
BLAST of CSPI03G22860 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.2e-42
Identity = 90/118 (76.27%), Postives = 99/118 (83.90%), Query Frame = 1 

Query: 14  SGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSK 73
           SGGGG   SGGGGG PCGACK LRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSK
Sbjct: 24  SGGGG--SSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSK 83

Query: 74  LLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA 132
           LLLH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQQQV  LQ ++ + +A LA
Sbjct: 84  LLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

[Close]
BLAST of CSPI03G22860 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-39
Identity = 85/119 (71.43%), Postives = 96/119 (80.67%), Query Frame = 1 

Query: 13  MSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           MS  G  S S GGGG PCGACK LRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVS
Sbjct: 1   MSSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA 132
           KLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L + +A LA
Sbjct: 61  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

[Close]
BLAST of CSPI03G22860 vs. Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.3e-39
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 1 

Query: 20  SGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + S    GSPCGACK LRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           + DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q A++++ + S
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

[Close]
BLAST of CSPI03G22860 vs. Swiss-Prot
Match: LBD17_ARATH (LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37
Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 1 

Query: 25  GGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 84
           G GSPCGACK LRR+CV  C+FAPYFC EQGA+ FAAIH+VFGASN SKLL H+P+ DR 
Sbjct: 3   GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRR 62

Query: 85  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLM 136
           EA  TI YEAQAR  DP+YGCV+HIF+LQQQV  LQTQL   K Q  +++M
Sbjct: 63  EAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

[Close]
BLAST of CSPI03G22860 vs. TrEMBL
Match: A0A0A0LAE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G398920 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 2.5e-126
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 1 

Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]
BLAST of CSPI03G22860 vs. TrEMBL
Match: B9S4L6_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0993260 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 6.9e-60
Identity = 140/222 (63.06%), Postives = 158/222 (71.17%), Query Frame = 1 

Query: 20  SGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + SG G GSPCGACK LRRKC +DCIFAPYFCSEQG ARFAAIHKVFGASNVSKLLLHVP
Sbjct: 2   ASSGSGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           V DRCEAVVTIAYEAQARI DPVYGCVAHIF+LQQQVA LQ QLM  KAQLA++++DS  
Sbjct: 62  VADRCEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVACLQAQLMQVKAQLAQSMVDSSR 121

Query: 140 NMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHE 199
           NME QW G+      S+    SNNY    TN  SPQSSLES  +N + ++ +   Q   E
Sbjct: 122 NMENQWQGNNICGMPSSSIAISNNYAAIYTNPISPQSSLESVEHNFDGVISMQDIQSSRE 181

Query: 200 SQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
               +SS           KK P +S ++ GEL  LALRMMRN
Sbjct: 182 DFAYQSS----------AKKRPYNS-SEWGELQELALRMMRN 212

[Close]
BLAST of CSPI03G22860 vs. TrEMBL
Match: A0A022PQA0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020441mg PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.8e-59
Identity = 144/246 (58.54%), Postives = 161/246 (65.45%), Query Frame = 1 

Query: 20  SGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           +G+GGG GSPCGACK LRRKC ADC+FAPYFCSEQG ARFAAIHKVFGASNVSKLLLHVP
Sbjct: 5   TGAGGGTGSPCGACKFLRRKCAADCVFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP 64

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMD--- 139
           VHDRCEAVVTIAYEAQARI DPVYGCV+HIFALQQQVAYLQ Q+M  KAQLA  L++   
Sbjct: 65  VHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVAYLQAQVMQVKAQLAHNLINNMD 124

Query: 140 ----------SGSNMEIQWTGDFNNNNLSN-----GSIPSNNYQTQITN-----NPSPQS 199
                     +  N  IQW G  +NNN  N     G I     Q  + N     N SPQS
Sbjct: 125 YQSSSSRNHHNADNNNIQWPGSCHNNNNINMGPAGGLIGGLQSQFAVQNYMNLSNISPQS 184

Query: 200 SLESA-ANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALA 242
           SL+S   NN++ +   N N      ++  SS E     P PR      S  DL EL ALA
Sbjct: 185 SLDSININNNDGINNNNNNNSNGMQEIQSSSDEYVMTCP-PRHSRKRHSQTDLSELQALA 244

[Close]
BLAST of CSPI03G22860 vs. TrEMBL
Match: A0A0D2P8Y0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G144400 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.4e-57
Identity = 142/222 (63.96%), Postives = 155/222 (69.82%), Query Frame = 1 

Query: 22  SGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVH 81
           +  G GSPCGACK LRRKC +DCIFAPYFCSEQG ARFAAIHKVFGASN SKLLLH+P H
Sbjct: 2   ASSGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNASKLLLHIPAH 61

Query: 82  DRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGSNM 141
           DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ QLM  KAQLA+  M+S  NM
Sbjct: 62  DRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQGQLMQMKAQLAQNAMNS-HNM 121

Query: 142 EIQWTGDFNNNNLSNG-SIPSNNYQTQITNNP-SPQSSLESAANNDEALLFINQNQLFHE 201
           E QW G     NLS G SIP+      I  NP SPQSSLES   N    L + + Q    
Sbjct: 122 ESQWQG-----NLSGGPSIPT----YPIYMNPISPQSSLESVELNSADNLNMQEIQ---- 181

Query: 202 SQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
                S +E      + RK+     ++DLGEL ALALRMMRN
Sbjct: 182 -----SREEFSNFHGYSRKR---PYNSDLGELQALALRMMRN 201

[Close]
BLAST of CSPI03G22860 vs. TrEMBL
Match: A0A061DWW2_THECC (Lateral organ boundaries-domain 16 OS=Theobroma cacao GN=TCM_004106 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 7.1e-57
Identity = 138/222 (62.16%), Postives = 154/222 (69.37%), Query Frame = 1 

Query: 20  SGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           SGS    GSPCGACK LRRKC +DCIFAPYFCSEQG ARFAAIHKVFGASNVSKLLLH+P
Sbjct: 4   SGSATATGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIP 63

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
            HDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ QLM  KAQLA+  M+S  
Sbjct: 64  AHDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVKAQLAQNAMNS-H 123

Query: 140 NMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHE 199
           N+E QW G     NLS   +PS        N  SPQSSLES   N    + + + Q    
Sbjct: 124 NIESQWQG-----NLS--GLPSIPTYPSYMNPISPQSSLESVELNSADSMNMQEIQ---- 183

Query: 200 SQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
                 S++    Q +P+K+     ++DLGEL ALALRMMRN
Sbjct: 184 ------SRDEFSFQGYPKKR---PCNSDLGELQALALRMMRN 204

[Close]
BLAST of CSPI03G22860 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16)

HSP 1 Score: 208.4 bits (529), Expect = 5.0e-54
Identity = 132/241 (54.77%), Postives = 160/241 (66.39%), Query Frame = 1 

Query: 19  GSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHV 78
           G+G+  G GSPCGACK LRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 79  PVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDS- 138
           P+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+M  KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 139 --------GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQI----TNNP-SPQSSLESAANN 198
                    +N  + W     +   S  S P N++Q        NNP SPQSSLE + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 199 --DEALLFINQNQLFHESQLSRSSQEP-QFLQPFPRKKLP-SSSHADLGELHALALRMMR 242
              +     N  +  H++       +   F + +P KK   S   +DLGEL ALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

[Close]
BLAST of CSPI03G22860 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 173.3 bits (438), Expect = 1.8e-43
Identity = 90/118 (76.27%), Postives = 99/118 (83.90%), Query Frame = 1 

Query: 14  SGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSK 73
           SGGGG   SGGGGG PCGACK LRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSK
Sbjct: 24  SGGGG--SSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSK 83

Query: 74  LLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA 132
           LLLH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQQQV  LQ ++ + +A LA
Sbjct: 84  LLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

[Close]
BLAST of CSPI03G22860 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 163.7 bits (413), Expect = 1.4e-40
Identity = 85/119 (71.43%), Postives = 96/119 (80.67%), Query Frame = 1 

Query: 13  MSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           MS  G  S S GGGG PCGACK LRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVS
Sbjct: 1   MSSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA 132
           KLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L + +A LA
Sbjct: 61  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

[Close]
BLAST of CSPI03G22860 vs. TAIR10
Match: AT3G58190.1 (AT3G58190.1 lateral organ boundaries-domain 29)

HSP 1 Score: 162.9 bits (411), Expect = 2.4e-40
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 1 

Query: 20  SGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + S    GSPCGACK LRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           + DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q A++++ + S
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

[Close]
BLAST of CSPI03G22860 vs. TAIR10
Match: AT2G42440.1 (AT2G42440.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 157.9 bits (398), Expect = 7.8e-39
Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 1 

Query: 25  GGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 84
           G GSPCGACK LRR+CV  C+FAPYFC EQGA+ FAAIH+VFGASN SKLL H+P+ DR 
Sbjct: 3   GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRR 62

Query: 85  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLM 136
           EA  TI YEAQAR  DP+YGCV+HIF+LQQQV  LQTQL   K Q  +++M
Sbjct: 63  EAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

[Close]
BLAST of CSPI03G22860 vs. NCBI nr
Match: gi|700202801|gb|KGN57934.1| (hypothetical protein Csa_3G398920 [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 3.5e-126
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 1 

Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]
BLAST of CSPI03G22860 vs. NCBI nr
Match: gi|449468656|ref|XP_004152037.1| (PREDICTED: LOB domain-containing protein 16 [Cucumis sativus])

HSP 1 Score: 443.0 bits (1138), Expect = 3.4e-121
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 1 

Query: 13  MSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           MSGGGGGSGSGGGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS
Sbjct: 1   MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE 132
           KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE
Sbjct: 61  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE 120

Query: 133 TLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFIN 192
           TLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFIN
Sbjct: 121 TLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFIN 180

Query: 193 QNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
           QNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN
Sbjct: 181 QNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 229

[Close]
BLAST of CSPI03G22860 vs. NCBI nr
Match: gi|659123856|ref|XP_008461877.1| (PREDICTED: LOB domain-containing protein 16 [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 1.8e-114
Identity = 225/241 (93.36%), Postives = 230/241 (95.44%), Query Frame = 1 

Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTS+SG GG     GGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSVSGCGGS----GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLM AKAQLA+TLMDSGSNMEIQWTGDFNN+NLSNGSIP+NNYQTQI NNP+PQSSLES
Sbjct: 121 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQ LQPFPRKKL SSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKL-SSSHADLGELHALALRMMR 236

Query: 241 N 242
           N
Sbjct: 241 N 236

[Close]
BLAST of CSPI03G22860 vs. NCBI nr
Match: gi|255560007|ref|XP_002521022.1| (PREDICTED: LOB domain-containing protein 16 [Ricinus communis])

HSP 1 Score: 238.8 bits (608), Expect = 9.8e-60
Identity = 140/222 (63.06%), Postives = 158/222 (71.17%), Query Frame = 1 

Query: 20  SGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + SG G GSPCGACK LRRKC +DCIFAPYFCSEQG ARFAAIHKVFGASNVSKLLLHVP
Sbjct: 2   ASSGSGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           V DRCEAVVTIAYEAQARI DPVYGCVAHIF+LQQQVA LQ QLM  KAQLA++++DS  
Sbjct: 62  VADRCEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVACLQAQLMQVKAQLAQSMVDSSR 121

Query: 140 NMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHE 199
           NME QW G+      S+    SNNY    TN  SPQSSLES  +N + ++ +   Q   E
Sbjct: 122 NMENQWQGNNICGMPSSSIAISNNYAAIYTNPISPQSSLESVEHNFDGVISMQDIQSSRE 181

Query: 200 SQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
               +SS           KK P +S ++ GEL  LALRMMRN
Sbjct: 182 DFAYQSS----------AKKRPYNS-SEWGELQELALRMMRN 212

[Close]
BLAST of CSPI03G22860 vs. NCBI nr
Match: gi|1009147532|ref|XP_015891463.1| (PREDICTED: LOB domain-containing protein 16 [Ziziphus jujuba])

HSP 1 Score: 238.0 bits (606), Expect = 1.7e-59
Identity = 139/217 (64.06%), Postives = 156/217 (71.89%), Query Frame = 1 

Query: 25  GGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 84
           G GSPCGACK LRRKC +DCIFAPYFCSEQG ARFAAIHKVFGASNVSKLLLHVPV DRC
Sbjct: 7   GTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVPDRC 66

Query: 85  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGSNMEIQ 144
           EAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ QLM AKAQLA+ L++S  NME Q
Sbjct: 67  EAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQAKAQLAQNLIES-RNMENQ 126

Query: 145 WTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHESQLSR 204
           W G       +NG     NY     N  SPQSSLES  +N++ +            +L  
Sbjct: 127 WPG------FANGGANFPNY-GNYRNPISPQSSLESVEHNNDGM---------STQELQG 186

Query: 205 SSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
             ++   LQP  +K+ P+++  DLGEL ALALRMMRN
Sbjct: 187 CREDFSLLQPCSKKR-PNNATTDLGELQALALRMMRN 205

The following BLAST results are available for this feature:
BLAST of CSPI03G22860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD16_ARATH8.9e-5354.77LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1[more]
LBD18_ARATH3.2e-4276.27LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD30_ARATH2.5e-3971.43LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1[more]
LBD29_ARATH4.3e-3965.00LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1[more]
LBD17_ARATH1.4e-3768.47LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17 PE=2 SV=1[more]
BLAST of CSPI03G22860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAE8_CUCSA2.5e-12699.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G398920 PE=4 SV=1[more]
B9S4L6_RICCO6.9e-6063.06LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0993260 PE=4... [more]
A0A022PQA0_ERYGU5.8e-5958.54Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020441mg PE=4 SV=1[more]
A0A0D2P8Y0_GOSRA5.4e-5763.96Uncharacterized protein OS=Gossypium raimondii GN=B456_007G144400 PE=4 SV=1[more]
A0A061DWW2_THECC7.1e-5762.16Lateral organ boundaries-domain 16 OS=Theobroma cacao GN=TCM_004106 PE=4 SV=1[more]
BLAST of CSPI03G22860 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G42430.15.0e-5454.77 lateral organ boundaries-domain 16[more]
AT2G45420.11.8e-4376.27 LOB domain-containing protein 18[more]
AT4G00220.11.4e-4071.43 Lateral organ boundaries (LOB) domain family protein[more]
AT3G58190.12.4e-4065.00 lateral organ boundaries-domain 29[more]
AT2G42440.17.8e-3968.47 Lateral organ boundaries (LOB) domain family protein[more]
BLAST of CSPI03G22860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202801|gb|KGN57934.1|3.5e-12699.59hypothetical protein Csa_3G398920 [Cucumis sativus][more]
gi|449468656|ref|XP_004152037.1|3.4e-12199.56PREDICTED: LOB domain-containing protein 16 [Cucumis sativus][more]
gi|659123856|ref|XP_008461877.1|1.8e-11493.36PREDICTED: LOB domain-containing protein 16 [Cucumis melo][more]
gi|255560007|ref|XP_002521022.1|9.8e-6063.06PREDICTED: LOB domain-containing protein 16 [Ricinus communis][more]
gi|1009147532|ref|XP_015891463.1|1.7e-5964.06PREDICTED: LOB domain-containing protein 16 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G22860.1CSPI03G22860.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 29..127
score: 2.0
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 28..130
score: 22
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 2..241
score: 3.8E
NoneNo IPR availablePANTHERPTHR31529:SF10LOB DOMAIN-CONTAINING PROTEIN 16coord: 2..241
score: 3.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G22860CmaCh02G017560Cucurbita maxima (Rimu)cmacpiB599
CSPI03G22860CmoCh02G018010Cucurbita moschata (Rifu)cmocpiB587
CSPI03G22860Cp4.1LG15g00690Cucurbita pepo (Zucchini)cpecpiB247
CSPI03G22860Carg08973Silver-seed gourdcarcpiB0813
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G22860Cucumber (Chinese Long) v3cpicucB144
CSPI03G22860Watermelon (97103) v2cpiwmbB242
CSPI03G22860Watermelon (97103) v2cpiwmbB252
CSPI03G22860Wax gourdcpiwgoB307
CSPI03G22860Cucumber (Gy14) v1cgycpiB038
CSPI03G22860Cucurbita maxima (Rimu)cmacpiB522
CSPI03G22860Cucurbita maxima (Rimu)cmacpiB908
CSPI03G22860Cucurbita moschata (Rifu)cmocpiB512
CSPI03G22860Cucumber (Chinese Long) v2cpicuB120
CSPI03G22860Watermelon (Charleston Gray)cpiwcgB266
CSPI03G22860Watermelon (97103) v1cpiwmB218
CSPI03G22860Cucurbita pepo (Zucchini)cpecpiB724
CSPI03G22860Bottle gourd (USVL1VR-Ls)cpilsiB214
CSPI03G22860Cucumber (Gy14) v2cgybcpiB110
CSPI03G22860Silver-seed gourdcarcpiB0786