Cucsa.053440 (gene) Cucumber (Gy14) v1

NameCucsa.053440
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLOB domain-containing protein, putative
Locationscaffold00581 : 226588 .. 228161 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGTCAATCATTTTGTTTTtCTTTAGTTATCATCACTTATTAGCTCGATCAGATTCATTGTCGTTTAATTTTCTGGTGATGAATGATTAAGAATATGAATAAAAGATCTGTTTTTTtAGGCTAGCTCTGTTTGAGTTTTTAATATTAAAAACCTAACAATATAACTATTTAATTCATTTGTGAATTTCCTGGTTTCGTTATTTGATTTAATTTATTTAGGCCATTTTTCAAAAGTAAAATTAAAGTTTCATAATTTCAAAGTGAAAAAAATGAGAATTAATTGTGCTGTTCTTTAAATTTAGCTAAGAATTTGAAATGTTTTTCCCCTTCGAATAAGACTAATTAAAACCTTGTAGAACAAGGGTGAAAAAACAAATAGAAACAGAAAATTTAAAAACAAATGATAGTTAATTGGAGCCTAAAAGTTAGATTAATTTTTtATAACCCATACAAATTTTTtAGCTTAGTGGCGATCGTCTATTGAAAAaCTACACAACAaTAATTTTTtGTTTtGCTGTTTGTTTTCATTGTGAAAGCCAAAGAAAAAAaGAAAAAAAAaTCATATTGGAGATGCAAAATTTCACCTGATTAATCCATTAATCTAAGTGAGAACTTTAAAAGCATCAACTTTTTAAtCTATAAAACAAGTCCTCTCTTTTCTTTTCTCACGCGATTCAAGGTTAGTTTGAATTGTCTTTTAATCAAACTTCGAGACAAACAGACGTTCTGAATTACAAGTTTGAACTGAAGGAATTTATTTATTTTtGGTTTTtGAAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCaCAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTtCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAaTTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAATTAATTGATGAAGAAAAAAGTCATGTGTAATTTTGTGAAGTACAGTGGATTTTGATGATATATCTATAGTC

mRNA sequence

ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAATTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAATTAATTGATGAAGAAAAAAGTCATGTGTAATTTTGTGAAGTACAGTGGATTTTGATGATATATCTATAGTC

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCaCAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTtCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAaTTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAA

Protein sequence

MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN*
BLAST of Cucsa.053440 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.7e-59
Identity = 133/241 (55.19%), Postives = 161/241 (66.80%), Query Frame = 1

Query: 19  GSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHV 78
           G+G+  G GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 79  PVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDS- 138
           P+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+M  KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 139 --------GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQI----TNNP-SPQSSLESAANN 198
                    +N  + W     +   S  S P N++Q        NNP SPQSSLE + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 199 --DEALLFINQNQLFHESQLSRSSQEP-QFLQPFPRKKLP-SSSHADLGELHALALRMMR 242
              +     N  +  H++       +   F + +P KK   S   +DLGEL ALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

BLAST of Cucsa.053440 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 6.6e-48
Identity = 95/138 (68.84%), Postives = 107/138 (77.54%), Query Frame = 1

Query: 4   SSSTSTNTSMSGGGGGSG----------SGGGGGSPCGACKFLRRKCVADCIFAPYFCSE 63
           S   +T T++ GGGGG G          SGGGGG PCGACKFLRRKCV  CIFAPYF SE
Sbjct: 2   SGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSE 61

Query: 64  QGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQ 123
           QG+A FAA+HKVFGASNVSKLLLH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQ
Sbjct: 62  QGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQ 121

Query: 124 QQVAYLQTQLMHAKAQLA 132
           QQV  LQ ++ + +A LA
Sbjct: 122 QQVVNLQAEVSYLQAHLA 139

BLAST of Cucsa.053440 vs. Swiss-Prot
Match: LBD30_ARATH (LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.4e-44
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 1

Query: 13  MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           MS  G  S S GGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVS
Sbjct: 1   MSSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA 132
           KLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L + +A LA
Sbjct: 61  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

BLAST of Cucsa.053440 vs. Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-42
Identity = 79/120 (65.83%), Postives = 95/120 (79.17%), Query Frame = 1

Query: 20  SGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + S    GSPCGACKFLRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           + DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q A++++ + S
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

BLAST of Cucsa.053440 vs. Swiss-Prot
Match: LBD20_ARATH (LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-41
Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 1

Query: 4   SSSTSTNTSMSGGG---GGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 63
           +S  +  +S+S GG     + +G G  SPCGACKFLRRKCV+ CIFAP+F S+QGAARFA
Sbjct: 23  TSQQTPTSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFA 82

Query: 64  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 123
           A+HKVFGASNVSKLL H+PV+ R +AVVTI+YEAQAR+ DPVYGCV+ I ALQQQVA LQ
Sbjct: 83  AVHKVFGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQ 142

Query: 124 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 183
            +L   ++QL  + +   + M+ Q         L          Q + +NN S  ++L  
Sbjct: 143 AELSVVQSQLINSRVAMANVMQQQTHHQQQQQQL------VVMQQPEYSNNSSASTTLAG 200

Query: 184 AANN 185
           AA N
Sbjct: 203 AAMN 200

BLAST of Cucsa.053440 vs. TrEMBL
Match: A0A0A0LAE8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G398920 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 2.9e-135
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1

Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240

Query: 241 N 242
           N
Sbjct: 241 N 241

BLAST of Cucsa.053440 vs. TrEMBL
Match: B9S4L6_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0993260 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 8.4e-66
Identity = 141/222 (63.51%), Postives = 159/222 (71.62%), Query Frame = 1

Query: 20  SGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + SG G GSPCGACKFLRRKC +DCIFAPYFCSEQG ARFAAIHKVFGASNVSKLLLHVP
Sbjct: 2   ASSGSGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           V DRCEAVVTIAYEAQARI DPVYGCVAHIF+LQQQVA LQ QLM  KAQLA++++DS  
Sbjct: 62  VADRCEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVACLQAQLMQVKAQLAQSMVDSSR 121

Query: 140 NMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHE 199
           NME QW G+      S+    SNNY    TN  SPQSSLES  +N + ++ +   Q   E
Sbjct: 122 NMENQWQGNNICGMPSSSIAISNNYAAIYTNPISPQSSLESVEHNFDGVISMQDIQSSRE 181

Query: 200 SQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
               +SS           KK P +S ++ GEL  LALRMMRN
Sbjct: 182 DFAYQSS----------AKKRPYNS-SEWGELQELALRMMRN 212

BLAST of Cucsa.053440 vs. TrEMBL
Match: A0A022PQA0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020441mg PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.2e-65
Identity = 145/246 (58.94%), Postives = 162/246 (65.85%), Query Frame = 1

Query: 20  SGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           +G+GGG GSPCGACKFLRRKC ADC+FAPYFCSEQG ARFAAIHKVFGASNVSKLLLHVP
Sbjct: 5   TGAGGGTGSPCGACKFLRRKCAADCVFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP 64

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMD--- 139
           VHDRCEAVVTIAYEAQARI DPVYGCV+HIFALQQQVAYLQ Q+M  KAQLA  L++   
Sbjct: 65  VHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVAYLQAQVMQVKAQLAHNLINNMD 124

Query: 140 ----------SGSNMEIQWTGDFNNNNLSN-----GSIPSNNYQTQITN-----NPSPQS 199
                     +  N  IQW G  +NNN  N     G I     Q  + N     N SPQS
Sbjct: 125 YQSSSSRNHHNADNNNIQWPGSCHNNNNINMGPAGGLIGGLQSQFAVQNYMNLSNISPQS 184

Query: 200 SLESA-ANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALA 242
           SL+S   NN++ +   N N      ++  SS E     P PR      S  DL EL ALA
Sbjct: 185 SLDSININNNDGINNNNNNNSNGMQEIQSSSDEYVMTCP-PRHSRKRHSQTDLSELQALA 244

BLAST of Cucsa.053440 vs. TrEMBL
Match: A0A067JP72_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21800 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.7e-63
Identity = 143/232 (61.64%), Postives = 157/232 (67.67%), Query Frame = 1

Query: 13  MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           M+  G GSG   G GSPCGACKFLRRKC ++CIFAPYFCS+QG ARFAAIHKVFGASNVS
Sbjct: 1   MASAGNGSG---GAGSPCGACKFLRRKCASNCIFAPYFCSDQGPARFAAIHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE 132
           KLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ QLM  KAQLA+
Sbjct: 61  KLLLHVPVADRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVKAQLAQ 120

Query: 133 TLMDSGSN--MEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLF 192
            + D+  N  ME QW G+         S P+ +      N  SPQSSLES   N      
Sbjct: 121 NMADTSRNNSMENQWQGNVYG---IPSSCPNYSNHNNYMNPISPQSSLESIDQN------ 180

Query: 193 INQNQ-LFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
           IN N  +         S+E QF      KK P ++  DLGEL ALALRMMRN
Sbjct: 181 INNNDGIMSMQDFQSMSREDQFAFQSFAKKRPHNA-TDLGELQALALRMMRN 219

BLAST of Cucsa.053440 vs. TrEMBL
Match: A0A061DWW2_THECC (Lateral organ boundaries-domain 16 OS=Theobroma cacao GN=TCM_004106 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.6e-62
Identity = 139/222 (62.61%), Postives = 155/222 (69.82%), Query Frame = 1

Query: 20  SGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           SGS    GSPCGACKFLRRKC +DCIFAPYFCSEQG ARFAAIHKVFGASNVSKLLLH+P
Sbjct: 4   SGSATATGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIP 63

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
            HDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ QLM  KAQLA+  M+S  
Sbjct: 64  AHDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVACLQAQLMQVKAQLAQNAMNS-H 123

Query: 140 NMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHE 199
           N+E QW G     NLS   +PS        N  SPQSSLES   N    + + + Q    
Sbjct: 124 NIESQWQG-----NLS--GLPSIPTYPSYMNPISPQSSLESVELNSADSMNMQEIQ---- 183

Query: 200 SQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
                 S++    Q +P+K+     ++DLGEL ALALRMMRN
Sbjct: 184 ------SRDEFSFQGYPKKR---PCNSDLGELQALALRMMRN 204

BLAST of Cucsa.053440 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16)

HSP 1 Score: 229.6 bits (584), Expect = 2.1e-60
Identity = 133/241 (55.19%), Postives = 161/241 (66.80%), Query Frame = 1

Query: 19  GSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHV 78
           G+G+  G GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 79  PVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDS- 138
           P+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+M  KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 139 --------GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQI----TNNP-SPQSSLESAANN 198
                    +N  + W     +   S  S P N++Q        NNP SPQSSLE + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 199 --DEALLFINQNQLFHESQLSRSSQEP-QFLQPFPRKKLP-SSSHADLGELHALALRMMR 242
              +     N  +  H++       +   F + +P KK   S   +DLGEL ALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

BLAST of Cucsa.053440 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-49
Identity = 95/138 (68.84%), Postives = 107/138 (77.54%), Query Frame = 1

Query: 4   SSSTSTNTSMSGGGGGSG----------SGGGGGSPCGACKFLRRKCVADCIFAPYFCSE 63
           S   +T T++ GGGGG G          SGGGGG PCGACKFLRRKCV  CIFAPYF SE
Sbjct: 2   SGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSE 61

Query: 64  QGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQ 123
           QG+A FAA+HKVFGASNVSKLLLH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQ
Sbjct: 62  QGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQ 121

Query: 124 QQVAYLQTQLMHAKAQLA 132
           QQV  LQ ++ + +A LA
Sbjct: 122 QQVVNLQAEVSYLQAHLA 139

BLAST of Cucsa.053440 vs. TAIR10
Match: AT4G00220.1 (AT4G00220.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 179.5 bits (454), Expect = 2.5e-45
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 1

Query: 13  MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           MS  G  S S GGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVS
Sbjct: 1   MSSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA 132
           KLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L + +A LA
Sbjct: 61  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

BLAST of Cucsa.053440 vs. TAIR10
Match: AT3G58190.1 (AT3G58190.1 lateral organ boundaries-domain 29)

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-43
Identity = 79/120 (65.83%), Postives = 95/120 (79.17%), Query Frame = 1

Query: 20  SGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + S    GSPCGACKFLRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           + DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q A++++ + S
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

BLAST of Cucsa.053440 vs. TAIR10
Match: AT3G03760.1 (AT3G03760.1 LOB domain-containing protein 20)

HSP 1 Score: 170.6 bits (431), Expect = 1.2e-42
Identity = 95/184 (51.63%), Postives = 122/184 (66.30%), Query Frame = 1

Query: 4   SSSTSTNTSMSGGG---GGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 63
           +S  +  +S+S GG     + +G G  SPCGACKFLRRKCV+ CIFAP+F S+QGAARFA
Sbjct: 23  TSQQTPTSSLSSGGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFA 82

Query: 64  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 123
           A+HKVFGASNVSKLL H+PV+ R +AVVTI+YEAQAR+ DPVYGCV+ I ALQQQVA LQ
Sbjct: 83  AVHKVFGASNVSKLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQ 142

Query: 124 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 183
            +L   ++QL  + +   + M+ Q         L          Q + +NN S  ++L  
Sbjct: 143 AELSVVQSQLINSRVAMANVMQQQTHHQQQQQQL------VVMQQPEYSNNSSASTTLAG 200

Query: 184 AANN 185
           AA N
Sbjct: 203 AAMN 200

BLAST of Cucsa.053440 vs. NCBI nr
Match: gi|700202801|gb|KGN57934.1| (hypothetical protein Csa_3G398920 [Cucumis sativus])

HSP 1 Score: 489.2 bits (1258), Expect = 4.2e-135
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1

Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240

Query: 241 N 242
           N
Sbjct: 241 N 241

BLAST of Cucsa.053440 vs. NCBI nr
Match: gi|449468656|ref|XP_004152037.1| (PREDICTED: LOB domain-containing protein 16 [Cucumis sativus])

HSP 1 Score: 468.4 bits (1204), Expect = 7.6e-129
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 1

Query: 13  MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS
Sbjct: 1   MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE 132
           KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE
Sbjct: 61  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE 120

Query: 133 TLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFIN 192
           TLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFIN
Sbjct: 121 TLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFIN 180

Query: 193 QNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
           QNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN
Sbjct: 181 QNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 229

BLAST of Cucsa.053440 vs. NCBI nr
Match: gi|659123856|ref|XP_008461877.1| (PREDICTED: LOB domain-containing protein 16 [Cucumis melo])

HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-122
Identity = 226/241 (93.78%), Postives = 231/241 (95.85%), Query Frame = 1

Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTS+SG GG     GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSVSGCGGS----GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLM AKAQLA+TLMDSGSNMEIQWTGDFNN+NLSNGSIP+NNYQTQI NNP+PQSSLES
Sbjct: 121 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQ LQPFPRKKL SSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKL-SSSHADLGELHALALRMMR 236

Query: 241 N 242
           N
Sbjct: 241 N 236

BLAST of Cucsa.053440 vs. NCBI nr
Match: gi|255560007|ref|XP_002521022.1| (PREDICTED: LOB domain-containing protein 16 [Ricinus communis])

HSP 1 Score: 258.5 bits (659), Expect = 1.2e-65
Identity = 141/222 (63.51%), Postives = 159/222 (71.62%), Query Frame = 1

Query: 20  SGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + SG G GSPCGACKFLRRKC +DCIFAPYFCSEQG ARFAAIHKVFGASNVSKLLLHVP
Sbjct: 2   ASSGSGTGSPCGACKFLRRKCASDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           V DRCEAVVTIAYEAQARI DPVYGCVAHIF+LQQQVA LQ QLM  KAQLA++++DS  
Sbjct: 62  VADRCEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVACLQAQLMQVKAQLAQSMVDSSR 121

Query: 140 NMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHE 199
           NME QW G+      S+    SNNY    TN  SPQSSLES  +N + ++ +   Q   E
Sbjct: 122 NMENQWQGNNICGMPSSSIAISNNYAAIYTNPISPQSSLESVEHNFDGVISMQDIQSSRE 181

Query: 200 SQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
               +SS           KK P +S ++ GEL  LALRMMRN
Sbjct: 182 DFAYQSS----------AKKRPYNS-SEWGELQELALRMMRN 212

BLAST of Cucsa.053440 vs. NCBI nr
Match: gi|694383495|ref|XP_009367705.1| (PREDICTED: LOB domain-containing protein 16 [Pyrus x bretschneideri])

HSP 1 Score: 257.3 bits (656), Expect = 2.7e-65
Identity = 148/230 (64.35%), Postives = 165/230 (71.74%), Query Frame = 1

Query: 13  MSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           M+ GG GS +G G GSPCGACKFLRRKC  DCIFAPYFCSEQG ARFAAIHKVFGASNVS
Sbjct: 1   MASGGAGS-AGIGTGSPCGACKFLRRKCAPDCIFAPYFCSEQGPARFAAIHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA- 132
           KLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCV HIFALQQQVA LQ QLM AKAQLA 
Sbjct: 61  KLLLHVPVHDRCEAVVTIAYEAQARIRDPVYGCVGHIFALQQQVACLQAQLMQAKAQLAH 120

Query: 133 ETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFI 192
           ++L+DS +    QW G    N + NGS+ S    +   N  SPQSSL+S AN+D A+   
Sbjct: 121 QSLVDSRNMESTQWQG----NGIGNGSVTSFPSYSSYMNPISPQSSLDSIANSDIAM--- 180

Query: 193 NQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN 242
                    Q  +SS+E +F      KK P   + +LGEL ALALRMMRN
Sbjct: 181 -------NMQEIQSSRE-EFSYQVCSKKRP--YNGNLGELQALALRMMRN 212

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LBD16_ARATH3.7e-5955.19LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1[more]
LBD18_ARATH6.6e-4868.84LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD30_ARATH4.4e-4472.27LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1[more]
LBD29_ARATH1.9e-4265.83LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1[more]
LBD20_ARATH2.1e-4151.63LOB domain-containing protein 20 OS=Arabidopsis thaliana GN=LBD20 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LAE8_CUCSA2.9e-135100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G398920 PE=4 SV=1[more]
B9S4L6_RICCO8.4e-6663.51LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0993260 PE=4... [more]
A0A022PQA0_ERYGU4.2e-6558.94Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020441mg PE=4 SV=1[more]
A0A067JP72_JATCU8.7e-6361.64Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21800 PE=4 SV=1[more]
A0A061DWW2_THECC5.6e-6262.61Lateral organ boundaries-domain 16 OS=Theobroma cacao GN=TCM_004106 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G42430.12.1e-6055.19 lateral organ boundaries-domain 16[more]
AT2G45420.13.7e-4968.84 LOB domain-containing protein 18[more]
AT4G00220.12.5e-4572.27 Lateral organ boundaries (LOB) domain family protein[more]
AT3G58190.11.1e-4365.83 lateral organ boundaries-domain 29[more]
AT3G03760.11.2e-4251.63 LOB domain-containing protein 20[more]
Match NameE-valueIdentityDescription
gi|700202801|gb|KGN57934.1|4.2e-135100.00hypothetical protein Csa_3G398920 [Cucumis sativus][more]
gi|449468656|ref|XP_004152037.1|7.6e-129100.00PREDICTED: LOB domain-containing protein 16 [Cucumis sativus][more]
gi|659123856|ref|XP_008461877.1|1.1e-12293.78PREDICTED: LOB domain-containing protein 16 [Cucumis melo][more]
gi|255560007|ref|XP_002521022.1|1.2e-6563.51PREDICTED: LOB domain-containing protein 16 [Ricinus communis][more]
gi|694383495|ref|XP_009367705.1|2.7e-6564.35PREDICTED: LOB domain-containing protein 16 [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.053440.1Cucsa.053440.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 29..127
score: 1.2
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 28..130
score: 22
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 2..241
score: 5.0E
NoneNo IPR availablePANTHERPTHR31529:SF10LOB DOMAIN-CONTAINING PROTEIN 16coord: 2..241
score: 5.0E