Cp4.1LG14g09780 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTTCGTGTCAATAGCTATTTTTCTTTCATCAGAGGCGACGAGGACTTGGACACACTGAGGGGAAATCCTTAATTCAGAATCAAGCTTTTCGTTCTAATTTCGTGTAGATTTCAGTTTTCCGGCGATCGTCGGTTGATTCGATATCTGTTCCGGCGATTTATGTTCGTCATTTCTAGCAATGTCGGTTAGTACTTCGTGAATTTCCCTCTCTTTTCATCGCGTTTGAAGATTCTGATTGCGAAGTGGAAAATCGTTGGGGAAGGATTGCATTGGGTTAGATTTGGACCCTTACGCTGTAGTTTTTCTTTGGAGTTATTACAAATTAGTGCAATGTGCGGCCAAGGGATTAGATCTCTTGTGGTTTATTTTCCCGTTTGATTTTCCCATTTGAGGGTTTTGTATCATGTCGAGATTTTCCCATTCAGTTTATCAAGAATTAGGATTTATGTTTAAGCAAATTGGTCCATTTCTATGTTTTGATCGATGAAATGTATTTTGAATCCGTTCCACGTTCGTTCCTCCTACTGAACCTGAACCTGCATAGAAGCATACATTCGAAATTAAAACCAGGAACGTCATGCCTGTAATTAATACTTCGAAGTGTGTAATTATTATTGCTGCTTGGCTTGTTGATGTCCATCGTTTTCTTGGCTGCATCCATGAGATTTTCTTTTTAGCTTTTCATTTCTTTTCTGGCCATAGCTGATTTTTTTTTTTTTTTTTACGCTCTTTCTGACTTATGTTGATCACTGTTCAGCTGTAGCAATGAATTTATGCACCTTCTTGGAGATAGTGGGAGATTTCTTGATCTTTGTCTGAACTGCTTTGTTCTGTATGTGCAGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATCTCAAGGAGTTTTTTTCCTTCTCGGGCGACATTGCATATGTTGAAATGCAGAGGTTGTGCAGGTTTTCATTTCAGTTTATGATATATATTCTTTTCGTTCAATGTTTTTATTCTTTTGCAGTGAAAGTGAACGGTCTCAAATCGCTTACGTAACCTTTAAGGATACACAAGGAGCAGAGACTGCCATTCTTTTGTCTGTAAGTTCACTTTGTAGACAAAGTCTCTAGGTCGCGGTAATTATAAGTTTCATACCTATTGGCATTTAAGATATAACTCTCAAAGATTCCATTATTAGTGGAGCTGTGAGTCAAAGTTGAAATATTGTTGGCAATATGGTTGTTCAAGCTTAAAATGGTGTTCATGGCTGTTATTAGTGGTCACGTCACATAGCCTTCATCTAGGGAGAGGATGTTGCTTTAACAACCTCACCTGGGAGATCCCACATCGGTTGGAGAGGAGAACGAACATTTTTTATAAGGGTATGGAAACCTCTCCTAGCATATGCGTTTTAAAAACCTTGAGGAGAAGTCCGAAAGGAAAAGCCCAAAGAGGACGATATCTGCTAGCGGTGGGCTTGGGCCGTTACATCACCACTAGAAGAGATCAGCGAGCACCTTAACATTTCTTCTTCTGTTCTCTTTTACTTGTACCTTACATCATTTCCACCTCCATCCTCGGTGCGAGCCCCAATATATGTATTAGGTGGATCTTGTTGCCATTTTACAATCACATGATGTATGATATGAGTGAGCATTTTGCCACTTAACGAGTTAAATGGTCTAAGGGACACGACCTTCGGTGCAAACATCAGGAGGTCAAATTTTGGCTTGATTGCTCTTCTATTATGTGAGAGTATAAGATAGACCTTAGCTGGAAGTTTGTTCTGCATCAATAAAATTGCCCCATTTTTCCTTGAGATGCATATTGTTTGAGTTTTTTTTCTTACATTCATCACTCGTTATACTTAACGTATTAACTAATGAGAAACAGCAATACGAATCGCCCGAGCTAGTTAATTAATGGAGCTCAACTTCTTGTCAGGGAGCGACAATAGTGGATCTTTCTGTCAACATCACTCCATGTCCTGATTATGTGCTCCCTCCTGAAGCTACCGCACCACCCCCTGTAAGATTCTTGGGACTGTTTGTTTTTTGGGCTGCTATGTGTGTCACTTTATATGATTTCTCTTAGTAGTTTACCAGCTTATTGTCTTGATTGTTGCAGGCCCCTGGAACTAATGAACCTGGAACGGCTGAATCCGCCTATCAGAAAGCAGAGGATGTGGTCAGCAGTATGCTTGCTAAGGGCTTTATCTTGGGCAAAGACGCACTCAACTCTGCAAAGGCATTTGATGAGAAGCACCAATTATCTTCCACAGCTTCAGCCAAAGTAGCTACATTGGATAAAAAAATCGGGTTCACTGAGAAACTTAGCGCTGGAACGGTTTTGGTGGGCGAAAAAGTTCGAGAAGTAGACCAGAAGTTTCAGGTTTCAGAGAAGACTAAATCAGCATTTGCAGTTGCAGAAGAGAAAGTTAGCAATGCTGGAGCTGCCATTATGAGTAACCGATATGTAAAGAGTGGGACTAGCTGGGTTGCTGATACTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAATCGCGGTGTCGGAAGAAGATGAGAAAAAGAAGACGACGGTCGAAACTTTGCATCTCCCCGAATCCCCTAAAGCAGCAGCACCTGTGCCCCCTGAGCCTCAACAACGTCCCAAACCCGAACCCGCTCAAGGTCTGATCCTCTAAATTGTTGTCACGTTTGTTGATATCTATGCCTGAAAGTTCTTGTAGCTGTAATGTGTATTTCCCCTTCAAATCTGGCATGGCTATATATATATATATATTAGGATGAAAATATAGAGTAGATTTCTTCCTGAATTAGTGGTCGGACTCTTCATTGCATAAGATATCTCCATCTGCAAGAATTTTAAAACAGCAGATTTTTCATTATTGTCAACAAAGTCTCTCTGCTCTTTCTACAATGCTTATGTATCAGTGCAGTTATGGCTTGTCTTTGGATTTCAGTGATTATTT TTGTTCGTGTCAATAGCTATTTTTCTTTCATCAGAGGCGACGAGGACTTGGACACACTGAGGGGAAATCCTTAATTCAGAATCAAGCTTTTCGTTCTAATTTCGTGTAGATTTCAGTTTTCCGGCGATCGTCGGTTGATTCGATATCTGTTCCGGCGATTTATGTTCGTCATTTCTAGCAATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATCTCAAGGAGTTTTTTTCCTTCTCGGGCGACATTGCATATGTTGAAATGCAGAGTGAAAGTGAACGGTCTCAAATCGCTTACGTAACCTTTAAGGATACACAAGGAGCAGAGACTGCCATTCTTTTGTCTGGAGCGACAATAGTGGATCTTTCTGTCAACATCACTCCATGTCCTGATTATGTGCTCCCTCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAATGAACCTGGAACGGCTGAATCCGCCTATCAGAAAGCAGAGGATGTGGTCAGCAGTATGCTTGCTAAGGGCTTTATCTTGGGCAAAGACGCACTCAACTCTGCAAAGGCATTTGATGAGAAGCACCAATTATCTTCCACAGCTTCAGCCAAAGTAGCTACATTGGATAAAAAAATCGGGTTCACTGAGAAACTTAGCGCTGGAACGGTTTTGGTGGGCGAAAAAGTTCGAGAAGTAGACCAGAAGTTTCAGGTTTCAGAGAAGACTAAATCAGCATTTGCAGTTGCAGAAGAGAAAGTTAGCAATGCTGGAGCTGCCATTATGAGTAACCGATATGTAAAGAGTGGGACTAGCTGGGTTGCTGATACTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAATCGCGGTGTCGGAAGAAGATGAGAAAAAGAAGACGACGGTCGAAACTTTGCATCTCCCCGAATCCCCTAAAGCAGCAGCACCTGTGCCCCCTGAGCCTCAACAACGTCCCAAACCCGAACCCGCTCAAGGTCTGATCCTCTAAATTGTTGTCACGTTTGTTGATATCTATGCCTGAAAGTTCTTGTAGCTGTAATGTGTATTTCCCCTTCAAATCTGGCATGGCTATATATATATATATATTAGGATGAAAATATAGAGTAGATTTCTTCCTGAATTAGTGGTCGGACTCTTCATTGCATAAGATATCTCCATCTGCAAGAATTTTAAAACAGCAGATTTTTCATTATTGTCAACAAAGTCTCTCTGCTCTTTCTACAATGCTTATGTATCAGTGCAGTTATGGCTTGTCTTTGGATTTCAGTGATTATTT ATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATCTCAAGGAGTTTTTTTCCTTCTCGGGCGACATTGCATATGTTGAAATGCAGAGTGAAAGTGAACGGTCTCAAATCGCTTACGTAACCTTTAAGGATACACAAGGAGCAGAGACTGCCATTCTTTTGTCTGGAGCGACAATAGTGGATCTTTCTGTCAACATCACTCCATGTCCTGATTATGTGCTCCCTCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAATGAACCTGGAACGGCTGAATCCGCCTATCAGAAAGCAGAGGATGTGGTCAGCAGTATGCTTGCTAAGGGCTTTATCTTGGGCAAAGACGCACTCAACTCTGCAAAGGCATTTGATGAGAAGCACCAATTATCTTCCACAGCTTCAGCCAAAGTAGCTACATTGGATAAAAAAATCGGGTTCACTGAGAAACTTAGCGCTGGAACGGTTTTGGTGGGCGAAAAAGTTCGAGAAGTAGACCAGAAGTTTCAGGTTTCAGAGAAGACTAAATCAGCATTTGCAGTTGCAGAAGAGAAAGTTAGCAATGCTGGAGCTGCCATTATGAGTAACCGATATGTAAAGAGTGGGACTAGCTGGGTTGCTGATACTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAATCGCGGTGTCGGAAGAAGATGAGAAAAAGAAGACGACGGTCGAAACTTTGCATCTCCCCGAATCCCCTAAAGCAGCAGCACCTGTGCCCCCTGAGCCTCAACAACGTCCCAAACCCGAACCCGCTCAAGGTCTGATCCTCTAA MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQSESERSQIAYVTFKDTQGAETAILLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNEPGTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKLSAGTVLVGEKVREVDQKFQVSEKTKSAFAVAEEKVSNAGAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDEKKKTTVETLHLPESPKAAAPVPPEPQQRPKPEPAQGLIL
BLAST of Cp4.1LG14g09780 vs. Swiss-Prot
Match: BPA1_ARATH (Binding partner of ACD11 1 OS=Arabidopsis thaliana GN=BPA1 PE=1 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 2.0e-67 Identity = 148/255 (58.04%), Postives = 188/255 (73.73%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TrEMBL
Match: A0A0A0L545_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008890 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 1.3e-121 Identity = 240/284 (84.51%), Postives = 260/284 (91.55%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TrEMBL
Match: A9PE83_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 2.4e-96 Identity = 205/284 (72.18%), Postives = 235/284 (82.75%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TrEMBL
Match: B9GLU8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s02090g PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 3.1e-96 Identity = 205/284 (72.18%), Postives = 234/284 (82.39%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TrEMBL
Match: A0A061G7T0_THECC (RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2 OS=Theobroma cacao GN=TCM_016568 PE=4 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 5.3e-96 Identity = 200/282 (70.92%), Postives = 232/282 (82.27%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TrEMBL
Match: A0A059BZT5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00244 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 6.9e-96 Identity = 201/285 (70.53%), Postives = 234/285 (82.11%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TAIR10
Match: AT4G17720.1 (AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 327.0 bits (837), Expect = 1.1e-89 Identity = 181/265 (68.30%), Postives = 216/265 (81.51%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TAIR10
Match: AT5G46870.1 (AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 302.4 bits (773), Expect = 3.0e-82 Identity = 167/269 (62.08%), Postives = 212/269 (78.81%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TAIR10
Match: AT5G16840.2 (AT5G16840.2 binding partner of acd11 1) HSP 1 Score: 261.5 bits (667), Expect = 5.8e-70 Identity = 150/255 (58.82%), Postives = 191/255 (74.90%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TAIR10
Match: AT1G67950.3 (AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 237.7 bits (605), Expect = 9.0e-63 Identity = 140/263 (53.23%), Postives = 183/263 (69.58%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. TAIR10
Match: AT5G32450.1 (AT5G32450.1 RNA binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 207.2 bits (526), Expect = 1.3e-53 Identity = 122/261 (46.74%), Postives = 170/261 (65.13%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. NCBI nr
Match: gi|659095580|ref|XP_008448657.1| (PREDICTED: uncharacterized protein LOC103490760 isoform X1 [Cucumis melo]) HSP 1 Score: 448.4 bits (1152), Expect = 9.5e-123 Identity = 243/284 (85.56%), Postives = 261/284 (91.90%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. NCBI nr
Match: gi|659095582|ref|XP_008448658.1| (PREDICTED: uncharacterized protein LOC103490760 isoform X2 [Cucumis melo]) HSP 1 Score: 446.8 bits (1148), Expect = 2.8e-122 Identity = 242/284 (85.21%), Postives = 260/284 (91.55%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. NCBI nr
Match: gi|449462041|ref|XP_004148750.1| (PREDICTED: uncharacterized protein LOC101207930 isoform X1 [Cucumis sativus]) HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-121 Identity = 240/284 (84.51%), Postives = 260/284 (91.55%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. NCBI nr
Match: gi|778675001|ref|XP_011650336.1| (PREDICTED: uncharacterized protein LOC101207930 isoform X2 [Cucumis sativus]) HSP 1 Score: 442.6 bits (1137), Expect = 5.2e-121 Identity = 239/284 (84.15%), Postives = 259/284 (91.20%), Query Frame = 1
BLAST of Cp4.1LG14g09780 vs. NCBI nr
Match: gi|743809448|ref|XP_011018509.1| (PREDICTED: uncharacterized protein LOC105121532 isoform X1 [Populus euphratica]) HSP 1 Score: 360.1 bits (923), Expect = 3.4e-96 Identity = 204/284 (71.83%), Postives = 234/284 (82.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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