Cp4.1LG14g05170 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g05170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG14 : 1132483 .. 1135737 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCCGACGCCGGCCAGGGCGCCGAAATCATCTGCTGCTCCAGTGAGTAGTCCTCCGGCGCCGAATGGGGAGATGGAACCACCGACGCCCTCCGTAGCTCCGACAGCGCCGAAGGCGGATAACGGCGGCGCTGCAAACAGATTCGCCATTGGTGGGTCAGTTGCATTTGGATTAATGGCGGCGGCTTTAATCGTTTAAATGAATTGATTGCAGATTCTGAATTTGACAATTTTAATGTGTTTGAAGCGGATTTTTGAATATTTTATTACTGATTATAATTGTGTTCATTGTCATTTGAGAAAGTTTTAATTTGTTAATTTTTTTAGTTATTAAATATTGTGGAAATTTATTGTTTCGTTTCATGAAAACACAAATGGATAAAAGAAAATTTTAAAATATCAACCCGTTTTAACCTATAATACAAATTTAAAAAATATTTAAAAAATTTGTCTAGGTAAAAATAAAAATTTAAAAACAATGAAATTGACAATCATACGTAGCAGTAGCAGACCAAAACTGTATATATGAATTAGAGATAAAATTAAACATTAAAAAGTTTGGATGAGGATAGATGAGAAAAAAAAAAGCCCAATAAAAAGCCATTATTACGGTACTGGCCCAAATTTGAGCCCAATCTAAAGAGCCCAAATTTGAGCCCAATAAAAACTGAGCCCAATAAGAAGCCATTATTATACGACATCGGCCCAAATTTGAGCCCAATAAAAAGTGAGCCCAATAAGAAGCCATTATTGTACGGCACTGGCCCAAATTTGAGCAAGTGAGCTCAATGAAAAGCCATTATTGTACGGTACTTGCCCAAATTTGAGCCCAATAAAAAATGAGCCCTAAAAAGCCATTATTNGGCTCACCTGCTCAAATTTGAGCAAGTGAGCCCAATAAAGTCATTATTGTACGGTACTGGCCCAAAGTTGAGCCCAATAAAAAGGCATTATTGTACGGCACTGGCCCAAATATTAGCCCAATAAATTAGGGCCCAATAAAGCCATTATTGTACGGTACTTGCCCAAATTTGAGCCCAATAAAAAATGAGCCCTAAAAAGCCATTATTGTACGGCACTGGCCCAAATTTTAGCCCAATAAATTAGAGCCCAATAAAAGCCATTATTGTACGGTCTGGCCCAAATTGAGCCCAATAAAAGCTTTAGTCTATTAATCTATGATTCTTCAATTTTTGAAGTGTAACTCTTGTTGTTATTTTCAAATTTTTAGGATTTAAATTTTTAAAAATTGGAATTTCAAATCTGTTCGAAAATATATATATTAACCACTTAAATTATGATTAAGTTGACTTTAGTTTTAAACGATTATGGAGAAATGTCAACTCTTTAATATATATATATATTTAATAATTATGTATCATTAAAAGAGACTCATCATCATAATCCTCAAATGTAATTCATGAAAAATGACACATGATGGCTGGTAGAAAAAAAAGTCAACTCTTATATCCCTAAATTAGGGATGAGTATCTATTATTGGATGAAACAATGAGTATTGTAGTGATCTCATCGAATAACTTCTCCTTGTCACAGAGATATTTGCTTGAGTAATAACATTTATTTATTTATTTACTTTAGTTACACAGACAAATAACTCGAGACATATATCGTAAATAAAAAAAGTATAAAGTTCGAAATCTTACTTCAAACGTGAAAAATGGGACAACCCGCATCACAAATTCTTAGATTTTAAGGAACAAAGTTGTGGAATTTAAAATGGTCCATACATAAACATAAAGCAAAAATTGAAAGGGTTTTGGAATGCATGCTTTGTTGAACTTAGTACCAATCATGTGGTTTGGACAAAAGAGAGAATTTAAGTTACAAAGAAAAAGGGAAAGTTCTGACAAAATAATGCCTTATCATACTTTTTTTTAACTTTAGTAAAATATTTATTGAGAGTAGTTTAATCAAATATTAATGCTTATAAAGGCATTTAAAAATAAAATAATTATTTTCCGATAATTTAACCAATTCGAACTACCCAAACTAAATTATAAGGGTTAGGTTCGGTTAAATTCCGTTCCGTTTATGGGTTTCCATTTTTTTTTTTAATATTTAACGTTTGTAACTAATATTGTGATGCGTTATGACTTGTAAATGTTTTATATTCGGTTAGAGCAGTGGGTAGTAAACTCTATTCGAGTATCTCGAGTTACTAACTCAATTGACTCGAAATTTCGGACTAATAAAAAAAATTTCAAAATTATAATTATTAAATGCCAAATAAAAATATAGAAACTAATAAATAACTTTTTTTCAAGATTATAATAAATATACTTTATTTATATATTTATACTTAGTGGGACCTACCCTACAATCTACTGGCCAGTCCACCTCCAGGCTGTGCCACCCTTTAACGGTCATGTTTCTGTCCAAAGCTTTTTTCTGACCGTTTATAATTTCTCGTATCTCAGTATTTAATTAAATGATTTATTATTAAAAAATGAAACTGTTCGAAATTCCAATAATCGAAATCGTCCACGTGTACGTTTGAGATCAGTTGACAGCTCTGCTTTTATGGTGGACCCGCACCGCGGTAAGCCTAAGGCAACCCAGCTTGGATTCTTCACGAAAAAAAGACTATCTCTTTTGAGCTATGATTGGCTATTTTCAGCTTTACGGCAAACTTAAATTTGGGAGTTACATCTGCCGTTGATCACGCTGAGATCTTTGATTAGAATTTGTACTCCGATCTAACGGCTGGCGTGGCTTTTACCTTTGACTCTAAGGGTTTCACTGTTTTTTTCTTCCTATATATACCTCCTCCCTGCTAGTGGCTTCTTCTCAAACTCAGAACTCGCTTTCTATCTCTCTCTCTTGATTCCTTCATCTTTCTCTCTTTCTCTCTCTAGATTTTTGGTTTTCTTCTGAGTTTTAATCGTTTATCGAAATGGCGATTAGGAGTTTTGTGGTGATGATTTTGGTGGCATTGTTGATCGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTGTCTCCGAGGAAATCACCGTCCAAGGCTCCGTCGACGTCTCCGTCAGTGAAGTCGCCGAAATCCTCTCCGGCCGCGCCTACTCCGGCTTCTTCGCCATCTACTTCTCCGTCTCCGGCGGCTTCTCCTTCCTCGATCTCCTCGCCGCCGGCTGACGCTCCCGCTCCGTCAGGTAGCGGCGCCGCTTCGATCTCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTTCTATACGCCGTCGTTTTGATGATCTGA

mRNA sequence

ATGAGTCCGACGCCGGCCAGGGCGCCGAAATCATCTGCTGCTCCAGTGAGTAGTCCTCCGGCGCCGAATGGGGAGATGGAACCACCGACGCCCTCCGTAGCTCCGACAGCGCCGAAGGCGGATAACGGCGGCGCTGCAAACAGATTCGCCATTGGTGGGAGTTTTGTGGTGATGATTTTGGTGGCATTGTTGATCGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTGTCTCCGAGGAAATCACCGTCCAAGGCTCCGTCGACGTCTCCGTCAGTGAAGTCGCCGAAATCCTCTCCGGCCGCGCCTACTCCGGCTTCTTCGCCATCTACTTCTCCGTCTCCGGCGGCTTCTCCTTCCTCGATCTCCTCGCCGCCGGCTGACGCTCCCGCTCCGTCAGGTAGCGGCGCCGCTTCGATCTCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTTCTATACGCCGTCGTTTTGATGATCTGA

Coding sequence (CDS)

ATGAGTCCGACGCCGGCCAGGGCGCCGAAATCATCTGCTGCTCCAGTGAGTAGTCCTCCGGCGCCGAATGGGGAGATGGAACCACCGACGCCCTCCGTAGCTCCGACAGCGCCGAAGGCGGATAACGGCGGCGCTGCAAACAGATTCGCCATTGGTGGGAGTTTTGTGGTGATGATTTTGGTGGCATTGTTGATCGGCTCTGCAATCGCGCAATCGCCGGCGGCATCTCCGTCATTGTCTCCGAGGAAATCACCGTCCAAGGCTCCGTCGACGTCTCCGTCAGTGAAGTCGCCGAAATCCTCTCCGGCCGCGCCTACTCCGGCTTCTTCGCCATCTACTTCTCCGTCTCCGGCGGCTTCTCCTTCCTCGATCTCCTCGCCGCCGGCTGACGCTCCCGCTCCGTCAGGTAGCGGCGCCGCTTCGATCTCTTTCTCGGTGTTCGGATCTGTGGCCGTTGTTCTATACGCCGTCGTTTTGATGATCTGA

Protein sequence

MSPTPARAPKSSAAPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSFVVMILVALLIGSAIAQSPAASPSLSPRKSPSKAPSTSPSVKSPKSSPAAPTPASSPSTSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVAVVLYAVVLMI
Homology
[Close]
BLAST of Cp4.1LG14g05170 vs. Swiss-Prot
Match: AGP1_ARATH (Classical arabinogalactan protein 1 OS=Arabidopsis thaliana GN=AGP1 PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07
Identity = 62/130 (47.69%), Postives = 76/130 (58.46%), Query Frame = 1 

Query: 50  AIGGSFVVMILVALLIGSAIAQSPAASPS------LSPRKSPSK--APSTSPSVKSPKSS 109
           A   S V ++L ALLI SA+AQSPA +PS      +SP  SP K  AP+ +P V    S 
Sbjct: 2   AFSKSLVFVLLAALLISSAVAQSPAPAPSNVGGRRISPAPSPKKMTAPAPAPEVSPSPSP 61

Query: 110 PAAPTPASSPS----------TSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVA 162
            AA TP SS S          T+ SPA SPS+IS  P +AP P+  GA S  F+ FGSVA
Sbjct: 62  AAALTPESSASPPSPPLADSPTADSPALSPSAISDSPTEAPGPAQGGAVSNKFASFGSVA 121

[Close]
BLAST of Cp4.1LG14g05170 vs. TrEMBL
Match: A0A0A0KZB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G111620 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-22
Identity = 86/119 (72.27%), Postives = 94/119 (78.99%), Query Frame = 1 

Query: 54  SFVVMILVALLIGSAIAQSPAASPSLSPRKSPSKAPSTSPSVKSPKSSPA-APTPAS--- 113
           S V +I V+  I SA AQSPAASPSLSP KSPSKAPS +    SPKSSPA APTP+S   
Sbjct: 5   SLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSHN----SPKSSPAVAPTPSSLKS 64

Query: 114 -------SPSTSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVAVVLYAVVLMI 162
                  SPSTSPSPA+SP+SISSPPADAPAPSG+GAASI+FSVFGSVAV LYAVVLMI
Sbjct: 65  PPSPPSSSPSTSPSPASSPASISSPPADAPAPSGNGAASITFSVFGSVAVALYAVVLMI 119

[Close]
BLAST of Cp4.1LG14g05170 vs. TrEMBL
Match: A0A0A0L0Q7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G111610 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 1 

Query: 2   SPTPARAPKSSAAPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSFVVMILV 61
           SP PA+APKSS APVSSPP+PNG+MEPPTPSVAP   K  NG  ANRFAIGGS   +++ 
Sbjct: 127 SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIA 186

Query: 62  ALL 65
           A +
Sbjct: 187 AFI 189

[Close]
BLAST of Cp4.1LG14g05170 vs. TrEMBL
Match: I3S0H2_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-09
Identity = 63/124 (50.81%), Postives = 85/124 (68.55%), Query Frame = 1 

Query: 56  VVMILVALLIGSAIAQSPAASPSLSPRKSP---------SKAPSTSPSVKSPKSSP---- 115
           V M+L ALL+GSA+AQSPA+SP+LSP K+P         S +P+ SPS ++P +SP    
Sbjct: 7   VFMLLAALLVGSAVAQSPASSPALSPTKTPVAASPRKSLSPSPAVSPSAQTPAASPPTPV 66

Query: 116 ---AAPTPA---SSPSTSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVAVVLYA 161
               +P+PA   S P++S +PA +PSSISSPP++A +PS +GAA   FSV GS AVV  A
Sbjct: 67  ESGPSPSPATVNSPPASSDAPAVTPSSISSPPSEAQSPSQNGAALNRFSVAGSAAVVFAA 126

[Close]
BLAST of Cp4.1LG14g05170 vs. TrEMBL
Match: V4KJQ5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10005132mg PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-07
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 1 

Query: 50  AIGGSFVVMILVALLIGSAIAQSPAASPS------LSPRKSPSK---APSTSPSVKS--- 109
           A   S   ++L ALLI SA+AQSPA +PS      LSP  SP K   AP+ SPS ++   
Sbjct: 2   AFSKSLGFLLLAALLISSAVAQSPAPAPSSGGGRRLSPAPSPKKMTPAPAISPSPETALT 61

Query: 110 PKSSPAAPTPASSPSTSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVAVVLYAV 162
           P+SS + P+P  + S S SPA +PSSIS+ P++AP P+ SGA S S+SVFGSVAVVL A 
Sbjct: 62  PESSSSPPSPPLADSPSDSPAVTPSSISNSPSEAPGPALSGAVSNSYSVFGSVAVVLTAA 121

[Close]
BLAST of Cp4.1LG14g05170 vs. TrEMBL
Match: I1KR06_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G070300 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-07
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 1 

Query: 56  VVMILVALLIGSAIAQSPAASPSLSPRKSP------SKAPSTSPSVKSPKSSPAAP---- 115
           V+ ++ ALL+ S +AQSPA+SP+LSP+++P      S +P+ SPS  SP SSP AP    
Sbjct: 7   VLTLVAALLVTSVVAQSPASSPALSPKRTPVATPQKSPSPAISPSAVSPSSSPPAPVVNT 66

Query: 116 ------------TPASSPSTSPS--PAASPSSISSPPADAPAPSGSGAASISFSVFGSVA 162
                       +P  SPS SP+  P+ +PS+IS+PP  APAPS +GAA   F+V GS A
Sbjct: 67  PSPSPNSVDSPPSPPQSPSVSPAGVPSVTPSAISAPPTGAPAPSQNGAALNRFTVAGSAA 126

[Close]
BLAST of Cp4.1LG14g05170 vs. TAIR10
Match: AT5G64310.1 (AT5G64310.1 arabinogalactan protein 1)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 62/130 (47.69%), Postives = 76/130 (58.46%), Query Frame = 1 

Query: 50  AIGGSFVVMILVALLIGSAIAQSPAASPS------LSPRKSPSK--APSTSPSVKSPKSS 109
           A   S V ++L ALLI SA+AQSPA +PS      +SP  SP K  AP+ +P V    S 
Sbjct: 2   AFSKSLVFVLLAALLISSAVAQSPAPAPSNVGGRRISPAPSPKKMTAPAPAPEVSPSPSP 61

Query: 110 PAAPTPASSPS----------TSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVA 162
            AA TP SS S          T+ SPA SPS+IS  P +AP P+  GA S  F+ FGSVA
Sbjct: 62  AAALTPESSASPPSPPLADSPTADSPALSPSAISDSPTEAPGPAQGGAVSNKFASFGSVA 121

[Close]
BLAST of Cp4.1LG14g05170 vs. NCBI nr
Match: gi|449438995|ref|XP_004137273.1| (PREDICTED: classical arabinogalactan protein 1-like [Cucumis sativus])

HSP 1 Score: 112.5 bits (280), Expect = 7.1e-22
Identity = 86/119 (72.27%), Postives = 94/119 (78.99%), Query Frame = 1 

Query: 54  SFVVMILVALLIGSAIAQSPAASPSLSPRKSPSKAPSTSPSVKSPKSSPA-APTPAS--- 113
           S V +I V+  I SA AQSPAASPSLSP KSPSKAPS +    SPKSSPA APTP+S   
Sbjct: 5   SLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSHN----SPKSSPAVAPTPSSLKS 64

Query: 114 -------SPSTSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVAVVLYAVVLMI 162
                  SPSTSPSPA+SP+SISSPPADAPAPSG+GAASI+FSVFGSVAV LYAVVLMI
Sbjct: 65  PPSPPSSSPSTSPSPASSPASISSPPADAPAPSGNGAASITFSVFGSVAVALYAVVLMI 119

[Close]
BLAST of Cp4.1LG14g05170 vs. NCBI nr
Match: gi|778697569|ref|XP_011654351.1| (PREDICTED: classical arabinogalactan protein 4-like [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-11
Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 1 

Query: 2   SPTPARAPKSSAAPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSFVVMILV 61
           SP PA+APKSS APVSSPP+PNG+MEPPTPSVAP   K  NG  ANRFAIGGS   +++ 
Sbjct: 127 SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIA 186

Query: 62  ALL 65
           A +
Sbjct: 187 AFI 189

[Close]
BLAST of Cp4.1LG14g05170 vs. NCBI nr
Match: gi|659125839|ref|XP_008462882.1| (PREDICTED: classical arabinogalactan protein 4-like [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 5.6e-11
Identity = 42/65 (64.62%), Postives = 48/65 (73.85%), Query Frame = 1 

Query: 1   MSPTPARAPKSSAAPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSFVVMIL 60
           +SP PA+APKSS APVSSPP+PNG+MEPPTPS AP   K  NG  ANRFAIGGS     +
Sbjct: 126 ISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSIAAGFM 185

Query: 61  VALLI 66
           +A  I
Sbjct: 186 IAAFI 190

[Close]
BLAST of Cp4.1LG14g05170 vs. NCBI nr
Match: gi|388491396|gb|AFK33764.1| (unknown [Lotus japonicus])

HSP 1 Score: 70.1 bits (170), Expect = 4.0e-09
Identity = 63/124 (50.81%), Postives = 85/124 (68.55%), Query Frame = 1 

Query: 56  VVMILVALLIGSAIAQSPAASPSLSPRKSP---------SKAPSTSPSVKSPKSSP---- 115
           V M+L ALL+GSA+AQSPA+SP+LSP K+P         S +P+ SPS ++P +SP    
Sbjct: 7   VFMLLAALLVGSAVAQSPASSPALSPTKTPVAASPRKSLSPSPAVSPSAQTPAASPPTPV 66

Query: 116 ---AAPTPA---SSPSTSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVAVVLYA 161
               +P+PA   S P++S +PA +PSSISSPP++A +PS +GAA   FSV GS AVV  A
Sbjct: 67  ESGPSPSPATVNSPPASSDAPAVTPSSISSPPSEAQSPSQNGAALNRFSVAGSAAVVFAA 126

[Close]
BLAST of Cp4.1LG14g05170 vs. NCBI nr
Match: gi|567137237|ref|XP_006394168.1| (hypothetical protein EUTSA_v10005132mg [Eutrema salsugineum])

HSP 1 Score: 62.8 bits (151), Expect = 6.4e-07
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 1 

Query: 50  AIGGSFVVMILVALLIGSAIAQSPAASPS------LSPRKSPSK---APSTSPSVKS--- 109
           A   S   ++L ALLI SA+AQSPA +PS      LSP  SP K   AP+ SPS ++   
Sbjct: 2   AFSKSLGFLLLAALLISSAVAQSPAPAPSSGGGRRLSPAPSPKKMTPAPAISPSPETALT 61

Query: 110 PKSSPAAPTPASSPSTSPSPAASPSSISSPPADAPAPSGSGAASISFSVFGSVAVVLYAV 162
           P+SS + P+P  + S S SPA +PSSIS+ P++AP P+ SGA S S+SVFGSVAVVL A 
Sbjct: 62  PESSSSPPSPPLADSPSDSPAVTPSSISNSPSEAPGPALSGAVSNSYSVFGSVAVVLTAA 121

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g05170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGP1_ARATH3.8e-0747.69Classical arabinogalactan protein 1 OS=Arabidopsis thaliana GN=AGP1 PE=2 SV=2[more]
BLAST of Cp4.1LG14g05170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZB8_CUCSA4.9e-2272.27Uncharacterized protein OS=Cucumis sativus GN=Csa_4G111620 PE=4 SV=1[more]
A0A0A0L0Q7_CUCSA1.3e-1166.67Uncharacterized protein OS=Cucumis sativus GN=Csa_4G111610 PE=4 SV=1[more]
I3S0H2_LOTJA2.8e-0950.81Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
V4KJQ5_EUTSA4.5e-0750.81Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10005132mg PE=4 SV=1[more]
I1KR06_SOYBN4.5e-0744.62Uncharacterized protein OS=Glycine max GN=GLYMA_08G070300 PE=4 SV=1[more]
BLAST of Cp4.1LG14g05170 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64310.12.1e-0847.69 arabinogalactan protein 1[more]
BLAST of Cp4.1LG14g05170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438995|ref|XP_004137273.1|7.1e-2272.27PREDICTED: classical arabinogalactan protein 1-like [Cucumis sativus][more]
gi|778697569|ref|XP_011654351.1|1.9e-1166.67PREDICTED: classical arabinogalactan protein 4-like [Cucumis sativus][more]
gi|659125839|ref|XP_008462882.1|5.6e-1164.62PREDICTED: classical arabinogalactan protein 4-like [Cucumis melo][more]
gi|388491396|gb|AFK33764.1|4.0e-0950.81unknown [Lotus japonicus][more]
gi|567137237|ref|XP_006394168.1|6.4e-0750.81hypothetical protein EUTSA_v10005132mg [Eutrema salsugineum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g05170.1Cp4.1LG14g05170.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g05170CmaCh16G002660Cucurbita maxima (Rimu)cmacpeB346
Cp4.1LG14g05170CmoCh16G002620Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g05170CsaV3_4G009600Cucumber (Chinese Long) v3cpecucB0267
Cp4.1LG14g05170Carg08076Silver-seed gourdcarcpeB0524
Cp4.1LG14g05170Carg16783Silver-seed gourdcarcpeB1215
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g05170Wax gourdcpewgoB0266
Cp4.1LG14g05170Wax gourdcpewgoB0282
Cp4.1LG14g05170Wax gourdcpewgoB0299
Cp4.1LG14g05170Cucurbita pepo (Zucchini)cpecpeB234
Cp4.1LG14g05170Cucurbita pepo (Zucchini)cpecpeB238
Cp4.1LG14g05170Cucumber (Gy14) v1cgycpeB0187
Cp4.1LG14g05170Cucumber (Gy14) v1cgycpeB1052
Cp4.1LG14g05170Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g05170Cucurbita maxima (Rimu)cmacpeB715
Cp4.1LG14g05170Cucurbita maxima (Rimu)cmacpeB718
Cp4.1LG14g05170Cucurbita moschata (Rifu)cmocpeB668
Cp4.1LG14g05170Cucurbita moschata (Rifu)cmocpeB671
Cp4.1LG14g05170Wild cucumber (PI 183967)cpecpiB220
Cp4.1LG14g05170Wild cucumber (PI 183967)cpecpiB224
Cp4.1LG14g05170Cucumber (Chinese Long) v2cpecuB218
Cp4.1LG14g05170Cucumber (Chinese Long) v2cpecuB222
Cp4.1LG14g05170Bottle gourd (USVL1VR-Ls)cpelsiB168
Cp4.1LG14g05170Bottle gourd (USVL1VR-Ls)cpelsiB169
Cp4.1LG14g05170Watermelon (Charleston Gray)cpewcgB190
Cp4.1LG14g05170Watermelon (Charleston Gray)cpewcgB196
Cp4.1LG14g05170Watermelon (Charleston Gray)cpewcgB211
Cp4.1LG14g05170Watermelon (97103) v1cpewmB204
Cp4.1LG14g05170Watermelon (97103) v1cpewmB215
Cp4.1LG14g05170Watermelon (97103) v1cpewmB224
Cp4.1LG14g05170Melon (DHL92) v3.5.1cpemeB202
Cp4.1LG14g05170Melon (DHL92) v3.5.1cpemeB198
Cp4.1LG14g05170Cucumber (Gy14) v2cgybcpeB484
Cp4.1LG14g05170Cucumber (Gy14) v2cgybcpeB488
Cp4.1LG14g05170Melon (DHL92) v3.6.1cpemedB244
Cp4.1LG14g05170Melon (DHL92) v3.6.1cpemedB240
Cp4.1LG14g05170Silver-seed gourdcarcpeB0523
Cp4.1LG14g05170Silver-seed gourdcarcpeB0525
Cp4.1LG14g05170Cucumber (Chinese Long) v3cpecucB0262