Cp4.1LG14g03640 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g03640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Sequence-specific DNA-binding transcription factor
Location	Cp4.1LG14 : 2107933 .. 2112154 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATTCATTTATATCCGCTCAAAGATTTCCGAAAATAACGAATTTCATTTCTGTAGACGGGATCTTCAATTCTGCTCTCTTTTTCCCGGCACTTTTTTTTTCTTCTTCTCAGTTTCTCTCTCTGCTTCTGCGATAGCGACGCCGAAATCAGAGAAACCACAGCGGAAGGTTTAGCTTATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACGGCTCCCGAGGTTTTTCTCCGCTTCTTCCTCTTCCTGTTCTGTATTTTTCTTATTTTGTCTCTTTTTTTTTTTTTTTTTTTGCTGTGAATGATGCGTCTGTGATGCATTTTCGTTGCTGGAGTTGAAATTTTTTGTGGATTACTTCAATTTCTATGTCTATTGGCTTGATTGATTGATTATTCTTTTTGAAATTGTGCTTACTGATTATTGTGCTTGCTTTCTTTTGAACTAATAACTGTTCCTTTGTTTTGCAACTTCTATTGTTCTTTCTAACATTTTTTCCTGTTTCTTATTCCACTGGTAATTGTGTTCTATCCCTTCGAATTACGATTTCTCGTCCCCAAATTCCTAATCTGTAATTCGTTTGCTCTAATTGCACAGAATCGATGCTGTGGTTAGTGTAGGTGTAGGTAGCTACATTTAGGTAAGAACTGCAGCGAGAGGGGACTGTGGGGCTTACTGGATAACGATAATTTGGAATTAGAGTGCCATTTTTAATGAAGTGGCTGGGAGTTAAACTTTTGGAGCATAGTTGTTGATAAAATTTGTTCCAGACCCTAACGAAATAGATCTATCCATCTAAATTTTTGTGGAAATTGTGTTGACCTTCTGCAGTTCAATCTGCAACAAGTTAATTTAGTACATTCTTGATAAGGAATTGAATTCTTTTCAATAAAATAAAATTTTCTTTTCTTGCTTTAAGGCTCCTATTATAGTTGTTTCTAGGCATTAAAGTCTTACAGGGTACACTTCCTCGAAACTTCCGGTGCAGTAATGTTAAATTCTTATTTTGATCAAGGTTGCGGAGATGGACGCTATATTGCAAGCACACAATAATACCATGCCAGCTCGGGAAGTTCTCGTTGCCCTTGCTGAGAAGTTCAGGTGGGCATTGAGCAATAGGCTTACTGTTGTTTTTGTTAAATTTGAATTGATCTTCTTTTGTTTTTTCTATAAGACAAGATTGAATAGTGAAAAGAATAATTTATTTATGTTCTTATAGTGAATCGGTAGAACGGAAAGGGAAGATTGCTGTGCAAATGAAACAAGTATAGTGACTTCTGTTCTGTACTCGACCTTGATATGATGATAGGTAGTGGTGTTCTGCTGATTATTATTGTTATTTCTTAGGTTTGGAATTGGTTCCAGAATAGACGATATGCTATAAGAGCGAAGACAACCAAGGCTCCTGGAAAGTTAGCTGTCTCTCCAATTGTCCAAATCGAGTCAACTCCTGTGAGAAATGTGCCTCAAACCACAGTTGTTCCTGCTCCTGCACCAGTAGGTATTAAAAAAATTTGTTATGTTTTTGAAGTTTTTAAATATTTTCGTTTGCTTATCCTGTTCTTTCTTTTTTATTTCATCTTTATTATGAGCTTATCACTAAAAGATCTATTCTAGTAAGGTATATGTGAGGCTTGGGGTTTGTGGCCCTTAGTCTTCATTTTAATTTCTACGTCCTTAATGAAATTACCATGTAAAAACAAATTTCAAATTGAGCTATGGTAGCTCTTTTGGTCCCTTTGCCCTTCTCAAGGCTTTTCGTCTAGCTCTCTTTTGCACCCGCTGAACATTCCCTCATTCCCCCAATACCCCCGCTTTTTCCTTGATTTGGAAGGTTAAGATTTTGAGGGTTATATTCTTTGTGTAGCATGTCTTACACGAGAGAGTTAAGGCTATAGTCCATGTGTAGAGGGACTCTACCTTCTTTCGAATCTCAAGCATTAGAAATCCATGAGGTATTGTTTTTTCTTTTAAATCATGGGTTGACCGTGTTTATGTTCTGTGAAGAACTATAATTTTTAGAATGGCATGGTGTGGGTAGCTATCAAGCACGGATGCTTCAGTTTGGATAGCATGTGAACGAATTGTATGTGTCCGAACACTTATTGAACATTTCAACACACGTTGGATGCTTGAGAGTACATGTCACTGTCGAAAAATTGTTGGACACGTGAACTAAATTGCTCATTTATCTATAAGAGAACAATAATAAACTTGAGAGGAAACACTAAACTTGTTTTTTTATGCATATAAGTGGATAAGCATCATTGATTCTAGATTTGCTATTTTAAGATGATTCATATTAAAACATGCTAAGTTTGGTTTTGTATGTTTATTTTTTCATTCAATTTCTGTACCAAATTCCAGGATCTGCAAAGAGTGCTTCAGAAAATCCATCGTTGGAGTTCGAAGCTAAATCTGGGAGAGATGGTGCATGGTCAGTATAGCCTGTCTACAAATATGGGGATTTTGGTGTGAATTAGCTTAGCCGGTCTCCATGTTTTATTATGATAAACTTCTTCATGATACACGTTTTCATAATACAAGAAATTAATAATTGATCTTTTAACTGCTCGTATTTTCAGGTATGACGTTGCTACCTTTCTATCCCATAGATCTGTGGAAAGCGGTGACCTGGTAATTTTGCGCTCGTTCCTTCATTATGTTGCCCTTCTTTCCTCTTCAGTCTATTTTCTGTGCGTTTTTATTAAAAACGAACATGTAAGTATTAAGCCAATTAATTCTTGAACGACACCATTCTTCGTTTATAGGAGAACATTACAATATGTGGTCATGTGATCACACTCCAAAGGATAACGAAGGCCTAATGTCAAGGGCTATTCGTTAGTGTGGTCGTGGATTCAAAACCTTTTGAATCACATTCTCAATCCTATGAGTTCTCTTAGTATTTTATGATGTATGGTTCGGCGTGGTCGCAAACTCAAACAAAAGTTCGAATTATGGGAATTGTAACATTGTCTATAAAGAAACCTGATGTTGTGATTTCTTTGCTTTAATCAGACTGCCTGTATCACCTAATAAACGTTGTTTGTCAGGAAGTACTAGTCAGATTTTCTGGTTTTGGATCGGAGGAGGACGAGTGGGTTAATATCCGAAGGAACATTAGACCTCGTTCTTTTCCTTGTGAATCATCGGAATGCGTGGCAGTTCTTCCGGGTGATCTCATCTTATGCTTTCAGGTAAAAGTGAGGCCTTTCCATCACCTTCTTGCAACCAATTCAGGATAATCTCTTTTACTAGGCCTGTCTATATTGCGCATATAATTTACGACTACCTTGTAAAACGACGCCCTTAAGTGGTGCACACAACGATCTTTTAACGTTCTCACAGCACACCCTATCAGTTATAGAGAAACCTTTTTTATGAGTAATTTTGTGATCTTCAAAATATTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGACGTTCGAGGCTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAGTCTGAGGTGTGTATCTTCTTTAGTTTCTTTTGATCATCAGCATTGTGAGCTGTTTGGGATTATTGATTTGTCTTGCTCTAAATTATTGTTAGGAAATCGTCCAGTTGAGAAAGATTTGTCGTCGGCCCGAGACTGATTACAGGTTGCAACAGCTTCATGCTGTAAATGAAGCAGCATCCACTGAGCCCTCAAAGTCTGGCTTGGATTCTGTACTGCTCAGCGGCCAGAGGATAAATTTTGAGGCAACACAAAAGCCAAATGCCAATATAAACGTCCATGCCCAAACTAATACTCAGGAAGGAAGGAGTACTGAAACTAACAGTGCTCCAACCACACTCAACTCTGGTAATTCTGCAGCTAGCTCTGCATTCTCGAGTGGTATCGTGACGTCGAACTCTGTTTCTGGATTGTCGGCTGACAATGTGTCTGATGGGAAGTTACTTAGCTGACTATGAAAACGAATTTCTCACTCAGTCTAATTTTAACTGAACGTATCAATTTAAAATTTTGCCTGACTCGTTTATTTAGGATGAGTAAATACGTAGCGAAGTCTGTTTTTTGCCACATGTTTCGAAGTTTTAGGTTCGAATCCACTTGTTGTGAATGCTGAATGTTCTCGACGGATAAAAAATGCAGGAGAACGCCTCGAGGCTAACAGGTCAGAGGCATCATCTCTCTTGTTTTAC

mRNA sequence

TACATTCATTTATATCCGCTCAAAGATTTCCGAAAATAACGAATTTCATTTCTGTAGACGGGATCTTCAATTCTGCTCTCTTTTTCCCGGCACTTTTTTTTTCTTCTTCTCAGTTTCTCTCTCTGCTTCTGCGATAGCGACGCCGAAATCAGAGAAACCACAGCGGAAGGTTTAGCTTATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACGGCTCCCGAGGTTGCGGAGATGGACGCTATATTGCAAGCACACAATAATACCATGCCAGCTCGGGAAGTTCTCGTTGCCCTTGCTGAGAAGTTCAGTGAATCGGTAGAACGGAAAGGGAAGATTGCTGTGCAAATGAAACAAGTTTGGAATTGGTTCCAGAATAGACGATATGCTATAAGAGCGAAGACAACCAAGGCTCCTGGAAAGTTAGCTGTCTCTCCAATTGTCCAAATCGAGTCAACTCCTGTGAGAAATGTGCCTCAAACCACAGTTGTTCCTGCTCCTGCACCAGTAGGATCTGCAAAGAGTGCTTCAGAAAATCCATCGTTGGAGTTCGAAGCTAAATCTGGGAGAGATGGTGCATGGTATGACGTTGCTACCTTTCTATCCCATAGATCTGTGGAAAGCGGTGACCTGGAAGTACTAGTCAGATTTTCTGGTTTTGGATCGGAGGAGGACGAGTGGGTTAATATCCGAAGGAACATTAGACCTCGTTCTTTTCCTTGTGAATCATCGGAATGCGTGGCAGTTCTTCCGGGTGATCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGACGTTCGAGGCTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAGTCTGAGGAAATCGTCCAGTTGAGAAAGATTTGTCGTCGGCCCGAGACTGATTACAGGTTGCAACAGCTTCATGCTGTAAATGAAGCAGCATCCACTGAGCCCTCAAAGTCTGGCTTGGATTCTGTACTGCTCAGCGGCCAGAGGATAAATTTTGAGGCAACACAAAAGCCAAATGCCAATATAAACGTCCATGCCCAAACTAATACTCAGGAAGGAAGGAGTACTGAAACTAACAGTGCTCCAACCACACTCAACTCTGGTAATTCTGCAGCTAGCTCTGCATTCTCGAGTGGTATCGTGACGTCGAACTCTGTTTCTGGATTGTCGGCTGACAATGTGTCTGATGGGAAGTTACTTAGCTGACTATGAAAACGAATTTCTCACTCAGTCTAATTTTAACTGAACGTATCAATTTAAAATTTTGCCTGACTCGTTTATTTAGGATGAGTAAATACGTAGCGAAGTCTGTTTTTTGCCACATGTTTCGAAGTTTTAGGTTCGAATCCACTTGTTGTGAATGCTGAATGTTCTCGACGGATAAAAAATGCAGGAGAACGCCTCGAGGCTAACAGGTCAGAGGCATCATCTCTCTTGTTTTAC

Coding sequence (CDS)

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACGGCTCCCGAGGTTGCGGAGATGGACGCTATATTGCAAGCACACAATAATACCATGCCAGCTCGGGAAGTTCTCGTTGCCCTTGCTGAGAAGTTCAGTGAATCGGTAGAACGGAAAGGGAAGATTGCTGTGCAAATGAAACAAGTTTGGAATTGGTTCCAGAATAGACGATATGCTATAAGAGCGAAGACAACCAAGGCTCCTGGAAAGTTAGCTGTCTCTCCAATTGTCCAAATCGAGTCAACTCCTGTGAGAAATGTGCCTCAAACCACAGTTGTTCCTGCTCCTGCACCAGTAGGATCTGCAAAGAGTGCTTCAGAAAATCCATCGTTGGAGTTCGAAGCTAAATCTGGGAGAGATGGTGCATGGTATGACGTTGCTACCTTTCTATCCCATAGATCTGTGGAAAGCGGTGACCTGGAAGTACTAGTCAGATTTTCTGGTTTTGGATCGGAGGAGGACGAGTGGGTTAATATCCGAAGGAACATTAGACCTCGTTCTTTTCCTTGTGAATCATCGGAATGCGTGGCAGTTCTTCCGGGTGATCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGACGTTCGAGGCTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAGTCTGAGGAAATCGTCCAGTTGAGAAAGATTTGTCGTCGGCCCGAGACTGATTACAGGTTGCAACAGCTTCATGCTGTAAATGAAGCAGCATCCACTGAGCCCTCAAAGTCTGGCTTGGATTCTGTACTGCTCAGCGGCCAGAGGATAAATTTTGAGGCAACACAAAAGCCAAATGCCAATATAAACGTCCATGCCCAAACTAATACTCAGGAAGGAAGGAGTACTGAAACTAACAGTGCTCCAACCACACTCAACTCTGGTAATTCTGCAGCTAGCTCTGCATTCTCGAGTGGTATCGTGACGTCGAACTCTGTTTCTGGATTGTCGGCTGACAATGTGTCTGATGGGAAGTTACTTAGCTGA

Protein sequence

MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGSAKSASENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPRSFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSKSGLDSVLLSGQRINFEATQKPNANINVHAQTNTQEGRSTETNSAPTTLNSGNSAASSAFSSGIVTSNSVSGLSADNVSDGKLLS

Homology

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BLAST of Cp4.1LG14g03640 vs. Swiss-Prot
Match: SHH2_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.1e-102
Identity = 206/353 (58.36%), Postives = 247/353 (69.97%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF  PEV EM+AIL  HN  MP R +L ALA+KFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIE-STPVRNVPQTTVVP----------- 120
           KQ+WNWFQNRRYA+RA+  KAPGKL VS + +++    +R+V Q   VP           
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 -APAPVGSA-----KSASENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSG 180
             PAP GS      +S S+N  LEFEAKS RDGAWYDV  FL+HR++E GD EV VRF+G
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSEEDEWVNIRRNIRPRSFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  EEDEW+N+++++R RS PCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQQLH-AVNEAA-STEPSKSGLD 300
           HDVRGCRCRFLVRY HDQSEEIV LRKICRRPETDYRLQQLH AVN+ A S +     LD
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPALD 300

Query: 301 SVLLSGQRINFEATQKPNANINVHAQTNTQEGRSTETNSAPTTLNSGNSAASS 334
           +   +   +       P A + + A     E +    ++ P TL   +S A++
Sbjct: 301 AAAKTPLSL-------PGATVPIVA----PESKDPSLSATPATLVQPSSNAAT 342

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BLAST of Cp4.1LG14g03640 vs. Swiss-Prot
Match: SHH1_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.6e-45
Identity = 108/249 (43.37%), Postives = 149/249 (59.84%), Query Frame = 1


Query: 14  FTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQMKQVWNWFQNR-RY 73
           FT  E+ +M+ + +   +    ++    +A  FS SV R GK ++  KQV  WFQ + ++
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73

Query: 74  AIRAKTTKAPGKLAVSPIVQIE-----STPVRNVPQTTVVPAPAPVGSAKS-ASENPSLE 133
             + K+   P     SP +QI      S+   N    T V     V + K  AS+   L 
Sbjct: 74  QSQPKSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLA 133

Query: 134 FEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPRSFPCES 193
           FEAKS RD AWYDV++FL++R + +G+LEV VRFSGF +  DEWVN++ ++R RS P E 
Sbjct: 134 FEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEP 193

Query: 194 SECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQ 253
           SEC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C FLVRY+ D +EE + 
Sbjct: 194 SECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLG 253

Query: 254 LRKICRRPE 256
           L +ICRRPE
Sbjct: 254 LERICRRPE 257

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BLAST of Cp4.1LG14g03640 vs. TrEMBL
Match: A0A0A0LC67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236580 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 6.0e-169
Identity = 321/372 (86.29%), Postives = 332/372 (89.25%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEM+AILQ HNNTMPAREVLVALA+KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGSAKSAS 120
           K      QNRRYAIRAKT+KAPGKLAVSP+VQIESTPVRNVPQT VVPAPAPVGSAK A 
Sbjct: 61  K------QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENP  EFEAKSGRDGAWYDVATFLSHRSVESGD EVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           S PCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSKSGLDSVLLSGQRINFEATQKP--- 300
           SEEIVQLRKICRRPETDYRLQQLHAVNEAAS EPSKSG+DSVLLSGQRINFE +Q P   
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 ---------NANINVHAQTNTQEGRSTETNSAPTTLNSGNSAASSAFSSGIVTSNSVSGL 360
                    N +IN HAQT+TQE R+TETN+APTT NS N A SSAFSSGIVT N+VS  
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSAFSSGIVT-NTVSAG 360

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BLAST of Cp4.1LG14g03640 vs. TrEMBL
Match: M5WG16_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007389mg PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 4.5e-124
Identity = 245/369 (66.40%), Postives = 282/369 (76.42%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT  EV+EM+AILQ HNNTMPAREVLVALA+KFSES ERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTQSEVSEMEAILQQHNNTMPAREVLVALADKFSESAERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQ-----TTVVPAPAPVGS 120
           KQVWNWFQNRRYAIRAK++K  GKL VSP+ + +S PVRNVPQ        + AP+  GS
Sbjct: 61  KQVWNWFQNRRYAIRAKSSKVLGKLNVSPMSRDDSNPVRNVPQGPQPIAAPIHAPSAQGS 120

Query: 121 AKSASENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRR 180
            K ASEN   EFEAKSGRDGAWYDVA FLSHR +E+GD EVLVRF+GFG EEDEWVN+R+
Sbjct: 121 GKGASENSIFEFEAKSGRDGAWYDVANFLSHRYLETGDPEVLVRFAGFGPEEDEWVNVRK 180

Query: 181 NIRPRSFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVR 240
           ++R RS PCESSECVAVLPGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVR
Sbjct: 181 HVRQRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVR 240

Query: 241 YDHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSK-----SGLDSVLLSGQRIN 300
           Y HDQSEEIV LRK+CRRPETDYRLQQLHAVNEAAS E          + S  +  ++ N
Sbjct: 241 YVHDQSEEIVPLRKVCRRPETDYRLQQLHAVNEAASAEQKSMDHFMGSVTSAEMMQKQQN 300

Query: 301 FEATQKP---NANINVHAQTNTQEGRSTETNSAPTTLNSGNSAASSAFSSGIVTSNSVSG 357
            +A   P   +AN ++  Q+ T E + +E ++  ++ NS     S+  +SG  T   V G
Sbjct: 301 TDAASAPPVLHANASLATQSTTPEFKGSEVSTVISSGNSNFPPGSAVITSGTATV-VVPG 360

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BLAST of Cp4.1LG14g03640 vs. TrEMBL
Match: G7LDQ2_MEDTR (Sequence-specific DNA-binding transcription factor OS=Medicago truncatula GN=MTR_8g061040 PE=4 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.2e-123
Identity = 244/375 (65.07%), Postives = 284/375 (75.73%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT PEV EM+AIL  HNN MPAR+VL ALA+KFSES +RKGKI VQM
Sbjct: 1   MGRPPSNGGPAFRFTQPEVTEMEAILSEHNNAMPARDVLQALADKFSESPDRKGKITVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGS----A 120
           KQVWNWFQN+RYAIRAK++K P KL ++P+ + + TP R + Q T  P PAP  S    A
Sbjct: 61  KQVWNWFQNKRYAIRAKSSKTPAKLNITPMPRTDLTPGRIMTQPTASPIPAPSASVQTTA 120

Query: 121 KSASENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRN 180
           K+A EN  +EFEAKSGRDGAWYDVATFLS+R +ES D EVLVRF+GFGSEEDEW+N+R+N
Sbjct: 121 KAAPENSVMEFEAKSGRDGAWYDVATFLSYRHLESSDPEVLVRFAGFGSEEDEWINVRKN 180

Query: 181 IRPRSFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRY 240
           +RPRS PCESSECVAVLPGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVRY
Sbjct: 181 VRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRY 240

Query: 241 DHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSKSGLD-SVLLSGQRIN--FEA 300
           DHDQSEEIV LRKICRRPETDYRL QLHAVN+AA T+  K  LD    + G R+    E 
Sbjct: 241 DHDQSEEIVPLRKICRRPETDYRLHQLHAVNDAAPTDQQKIALDHPANVHGARVTNPSEM 300

Query: 301 TQKPNANINVH-----AQTNTQ---EGRSTETNSAPT--TLNSGNSAA-SSAFSSGIVTS 358
            QK     N+H      QTN     +  + +   A T   + +GNS   SSA  +GI+ +
Sbjct: 301 VQKQQQIANIHIVTPVLQTNVSIPPQSMNVDPMKAETKADVQAGNSVTPSSAAFTGIIAT 360

[Close]

BLAST of Cp4.1LG14g03640 vs. TrEMBL
Match: W9RI10_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012170 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-122
Identity = 241/372 (64.78%), Postives = 276/372 (74.19%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPP NGGPAFRFTA EVAEM+AILQ HNNTMPARE+LV LA+KFSESVERKGKI VQM
Sbjct: 1   MGRPPGNGGPAFRFTASEVAEMEAILQEHNNTMPAREILVDLADKFSESVERKGKIMVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGSAKSAS 120
           KQVWNWFQNRRYAIRAK ++  G L+VS + + + TPVRNVPQ    P PAP G+ + AS
Sbjct: 61  KQVWNWFQNRRYAIRAKLSRNLGMLSVSSMPRDDPTPVRNVPQAITAPIPAPSGTGRGAS 120

Query: 121 ENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           EN  +EFEAKSGRDGAWYDVA F SHR +ESGD EVLVRF GFG E+DEWVNIR+++R R
Sbjct: 121 ENSIMEFEAKSGRDGAWYDVANFFSHRYLESGDPEVLVRFVGFGPEDDEWVNIRKHVRQR 180

Query: 181 SFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           S PCESSECVAVLPGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSKSGLDSVLLSG--QRINFEATQK-- 300
           SEEIV LRK+CRRPETDYRLQQL+AVNEAAS E  KS  D+    G   RI+ E T K  
Sbjct: 241 SEEIVPLRKVCRRPETDYRLQQLYAVNEAASAEQQKSSTDNFGGGGFRARISAETTPKLQ 300

Query: 301 --------PNANINVHAQTNTQEGRSTETNSAPTTLNSGNSAASSAFSSGIVTSNSVSG- 358
                   P  +      T        +       +++GNS   +A  +GI++ +  S  
Sbjct: 301 HADAALVAPALHATAALATKASILEPKKVEIVNVVVDAGNSNNVTASGNGIMSGSPASNK 360

[Close]

BLAST of Cp4.1LG14g03640 vs. TrEMBL
Match: A0A0R0H5Q7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G158000 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.6e-121
Identity = 231/342 (67.54%), Postives = 263/342 (76.90%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT PEVAEM+AILQ HNN MP+R+VL  LAEKFSES +RKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTQPEVAEMEAILQEHNNAMPSRDVLTTLAEKFSESQDRKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIE--STPVRNVPQTTVVPAPAPVGSA-- 120
           KQVWNWFQN+RYAIRAK++K PGKL ++P+ + +  STP+R++PQ     AP P  SA  
Sbjct: 61  KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDYNSTPIRSMPQQPTA-APIPAASATV 120

Query: 121 ----KSASENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVN 180
               K+  EN  LEFEAKSGRDGAWYDVATFLSHR +E+ D EVLVRF+GFG EEDEW+N
Sbjct: 121 PTAVKATPENSVLEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWIN 180

Query: 181 IRRNIRPRSFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRF 240
           IR+++RPRS PCESSECV V+PGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRF
Sbjct: 181 IRKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRF 240

Query: 241 LVRYDHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSKSGLDSVLLSGQRINFE 300
           LVRYDHDQSEEIV LRKICRRPETDYRLQQLHAVNEAA  +  K+G+D            
Sbjct: 241 LVRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPMDQQKTGMD------------ 300

Query: 301 ATQKPNANINVHAQTNTQEG------RSTETNSAPTTLNSGN 329
               P AN+N    T T+        R+T T + P  L + N
Sbjct: 301 ----PAANVNAVRATTTETAANVNAVRATTTETVPKQLIAAN 325

[Close]

BLAST of Cp4.1LG14g03640 vs. TAIR10
Match: AT3G18380.2 (AT3G18380.2 sequence-specific DNA binding transcription factors;sequence-specific DNA binding)

HSP 1 Score: 368.6 bits (945), Expect = 4.3e-102
Identity = 206/354 (58.19%), Postives = 247/354 (69.77%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF  PEV EM+AIL  HN  MP R +L ALA+KFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIE-STPVRNVPQTTVVP----------- 120
           KQ+WNWFQNRRYA+RA+  KAPGKL VS + +++    +R+V Q   VP           
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 -APAPVGSA-----KSASENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSG 180
             PAP GS      +S S+N  LEFEAKS RDGAWYDV  FL+HR++E GD EV VRF+G
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSEEDEWVNIRRNIRPRSFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  EEDEW+N+++++R RS PCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFLVRYDHDQSE-EIVQLRKICRRPETDYRLQQLH-AVNEAA-STEPSKSGL 300
           HDVRGCRCRFLVRY HDQSE EIV LRKICRRPETDYRLQQLH AVN+ A S +     L
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEQEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPAL 300

Query: 301 DSVLLSGQRINFEATQKPNANINVHAQTNTQEGRSTETNSAPTTLNSGNSAASS 334
           D+   +   +       P A + + A     E +    ++ P TL   +S A++
Sbjct: 301 DAAAKTPLSL-------PGATVPIVA----PESKDPSLSATPATLVQPSSNAAT 343

[Close]

BLAST of Cp4.1LG14g03640 vs. TAIR10
Match: AT1G15215.2 (AT1G15215.2 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1))

HSP 1 Score: 184.9 bits (468), Expect = 8.9e-47
Identity = 108/249 (43.37%), Postives = 149/249 (59.84%), Query Frame = 1


Query: 14  FTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQMKQVWNWFQNR-RY 73
           FT  E+ +M+ + +   +    ++    +A  FS SV R GK ++  KQV  WFQ + ++
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73

Query: 74  AIRAKTTKAPGKLAVSPIVQIE-----STPVRNVPQTTVVPAPAPVGSAKS-ASENPSLE 133
             + K+   P     SP +QI      S+   N    T V     V + K  AS+   L 
Sbjct: 74  QSQPKSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLA 133

Query: 134 FEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPRSFPCES 193
           FEAKS RD AWYDV++FL++R + +G+LEV VRFSGF +  DEWVN++ ++R RS P E 
Sbjct: 134 FEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEP 193

Query: 194 SECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQ 253
           SEC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C FLVRY+ D +EE + 
Sbjct: 194 SECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLG 253

Query: 254 LRKICRRPE 256
           L +ICRRPE
Sbjct: 254 LERICRRPE 257

[Close]

BLAST of Cp4.1LG14g03640 vs. NCBI nr
Match: gi|778680368|ref|XP_011651298.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 624.8 bits (1610), Expect = 9.5e-176
Identity = 327/372 (87.90%), Postives = 338/372 (90.86%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEM+AILQ HNNTMPAREVLVALA+KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGSAKSAS 120
           KQVWNWFQNRRYAIRAKT+KAPGKLAVSP+VQIESTPVRNVPQT VVPAPAPVGSAK A 
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENP  EFEAKSGRDGAWYDVATFLSHRSVESGD EVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           S PCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSKSGLDSVLLSGQRINFEATQKP--- 300
           SEEIVQLRKICRRPETDYRLQQLHAVNEAAS EPSKSG+DSVLLSGQRINFE +Q P   
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 ---------NANINVHAQTNTQEGRSTETNSAPTTLNSGNSAASSAFSSGIVTSNSVSGL 360
                    N +IN HAQT+TQE R+TETN+APTT NS N A SSAFSSGIVT N+VS  
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSAFSSGIVT-NTVSAG 360

[Close]

BLAST of Cp4.1LG14g03640 vs. NCBI nr
Match: gi|659111991|ref|XP_008456010.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo])

HSP 1 Score: 615.1 bits (1585), Expect = 7.5e-173
Identity = 326/383 (85.12%), Postives = 337/383 (87.99%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEM+ ILQ HNNTMPAREVLVALA+KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGSAKSAS 120
           KQVWNWFQNRRYAIRAKT+KAPGKLAVSP+VQIESTPVRNVPQT VVPAP PVG+AKSA 
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENP  EFEAKSGRDGAWYDVATFLSHRSVESGD EVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           S PCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSKSGLDSVLLSGQRINFEATQKP--- 300
           SEEIVQLRKICRRPETDYRLQQLHAVNEAAS EPSKSG+DSVLLSGQRINFE  Q P   
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSK 300

Query: 301 ---------NANINVHAQTNTQEGRSTETN-----------SAPTTLNSGNSAASSAFSS 360
                    N +IN HAQT+TQE R+TETN           +APTT NS N A SSAFSS
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSS 360

[Close]

BLAST of Cp4.1LG14g03640 vs. NCBI nr
Match: gi|700202508|gb|KGN57641.1| (hypothetical protein Csa_3G236580 [Cucumis sativus])

HSP 1 Score: 601.7 bits (1550), Expect = 8.6e-169
Identity = 321/372 (86.29%), Postives = 332/372 (89.25%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEM+AILQ HNNTMPAREVLVALA+KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKAPGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGSAKSAS 120
           K      QNRRYAIRAKT+KAPGKLAVSP+VQIESTPVRNVPQT VVPAPAPVGSAK A 
Sbjct: 61  K------QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPSLEFEAKSGRDGAWYDVATFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPR 180
           ENP  EFEAKSGRDGAWYDVATFLSHRSVESGD EVLVRFSGFGSEEDEWVNIRRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SFPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           S PCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASTEPSKSGLDSVLLSGQRINFEATQKP--- 300
           SEEIVQLRKICRRPETDYRLQQLHAVNEAAS EPSKSG+DSVLLSGQRINFE +Q P   
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 ---------NANINVHAQTNTQEGRSTETNSAPTTLNSGNSAASSAFSSGIVTSNSVSGL 360
                    N +IN HAQT+TQE R+TETN+APTT NS N A SSAFSSGIVT N+VS  
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSAFSSGIVT-NTVSAG 360

[Close]

BLAST of Cp4.1LG14g03640 vs. NCBI nr
Match: gi|778680371|ref|XP_011651299.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 584.3 bits (1505), Expect = 1.4e-163
Identity = 307/351 (87.46%), Postives = 318/351 (90.60%), Query Frame = 1


Query: 22  MDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKA 81
           M+AILQ HNNTMPAREVLVALA+KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+KA
Sbjct: 1   MEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGSAKSASENPSLEFEAKSGRDGAWYDVA 141
           PGKLAVSP+VQIESTPVRNVPQT VVPAPAPVGSAK A ENP  EFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPRSFPCESSECVAVLPGDLILCF 201
           TFLSHRSVESGD EVLVRFSGFGSEEDEWVNIRRNIRPRS PCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 202 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 261
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 262 QLHAVNEAASTEPSKSGLDSVLLSGQRINFEATQKP------------NANINVHAQTNT 321
           QLHAVNEAAS EPSKSG+DSVLLSGQRINFE +Q P            N +IN HAQT+T
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 322 QEGRSTETNSAPTTLNSGNSAASSAFSSGIVTSNSVSGLSADNVSDGKLLS 361
           QE R+TETN+APTT NS N A SSAFSSGIVT N+VS  SADNVSDGKLLS
Sbjct: 301 QEARNTETNTAPTTFNSANLAGSSAFSSGIVT-NTVSAGSADNVSDGKLLS 350

[Close]

BLAST of Cp4.1LG14g03640 vs. NCBI nr
Match: gi|659111993|ref|XP_008456011.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo])

HSP 1 Score: 574.7 bits (1480), Expect = 1.1e-160
Identity = 306/362 (84.53%), Postives = 317/362 (87.57%), Query Frame = 1


Query: 22  MDAILQAHNNTMPAREVLVALAEKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKA 81
           M+ ILQ HNNTMPAREVLVALA+KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+KA
Sbjct: 1   METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAVSPIVQIESTPVRNVPQTTVVPAPAPVGSAKSASENPSLEFEAKSGRDGAWYDVA 141
           PGKLAVSP+VQIESTPVRNVPQT VVPAP PVG+AKSA ENP  EFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDLEVLVRFSGFGSEEDEWVNIRRNIRPRSFPCESSECVAVLPGDLILCF 201
           TFLSHRSVESGD EVLVRFSGFGSEEDEWVNIRRNIRPRS PCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 202 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 261
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 262 QLHAVNEAASTEPSKSGLDSVLLSGQRINFEATQKP------------NANINVHAQTNT 321
           QLHAVNEAAS EPSKSG+DSVLLSGQRINFE  Q P            N +IN HAQT+T
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 322 QEGRSTETN-----------SAPTTLNSGNSAASSAFSSGIVTSNSVSGLSADNVSDGKL 361
           QE R+TETN           +APTT NS N A SSAFSSGIVT N+VSG SADNVSDGKL
Sbjct: 301 QEARNTETNTAPITFSSGNHNAPTTFNSANLAGSSAFSSGIVT-NTVSGGSADNVSDGKL 360

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g03640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHH2_ARATH	3.1e-102	58.36	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1	[more]
SHH1_ARATH	1.6e-45	43.37	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1	[more]

BLAST of Cp4.1LG14g03640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC67_CUCSA	6.0e-169	86.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236580 PE=4 SV=1	[more]
M5WG16_PRUPE	4.5e-124	66.40	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007389mg PE=4 SV=1	[more]
G7LDQ2_MEDTR	2.2e-123	65.07	Sequence-specific DNA-binding transcription factor OS=Medicago truncatula GN=MTR...	[more]
W9RI10_9ROSA	1.1e-122	64.78	Uncharacterized protein OS=Morus notabilis GN=L484_012170 PE=4 SV=1	[more]
A0A0R0H5Q7_SOYBN	1.6e-121	67.54	Uncharacterized protein OS=Glycine max GN=GLYMA_12G158000 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g03640 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18380.2	4.3e-102	58.19	sequence-specific DNA binding transcription factors;sequence-specifi...	[more]
AT1G15215.2	8.9e-47	43.37	BEST Arabidopsis thaliana protein match is: sequence-specific DNA bi...	[more]

BLAST of Cp4.1LG14g03640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680368\|ref\|XP_011651298.1\|	9.5e-176	87.90	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis sativus]	[more]
gi\|659111991\|ref\|XP_008456010.1\|	7.5e-173	85.12	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo]	[more]
gi\|700202508\|gb\|KGN57641.1\|	8.6e-169	86.29	hypothetical protein Csa_3G236580 [Cucumis sativus]	[more]
gi\|778680371\|ref\|XP_011651299.1\|	1.4e-163	87.46	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis sativus]	[more]
gi\|659111993\|ref\|XP_008456011.1\|	1.1e-160	84.53	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003682	chromatin binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g03640.1	Cp4.1LG14g03640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 7..81 score: 0.
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 13..77 score: 9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 13..80 score: 8.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 4..76 score: 9.84
None	No IPR available	PANTHER	PTHR33827	FAMILY NOT NAMED	coord: 2..311 score: 2.3E
None	No IPR available	PANTHER	PTHR33827:SF3	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 2..311 score: 2.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g03640	Cucsa.032420	Cucumber (Gy14) v1	cgycpeB0005
Cp4.1LG14g03640	CmaCh16G004110	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g03640	CmaCh04G005580	Cucurbita maxima (Rimu)	cmacpeB715
Cp4.1LG14g03640	CmoCh04G005930	Cucurbita moschata (Rifu)	cmocpeB668
Cp4.1LG14g03640	CmoCh16G004430	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g03640	Cla004283	Watermelon (97103) v1	cpewmB228
Cp4.1LG14g03640	Csa3G236580	Cucumber (Chinese Long) v2	cpecuB205
Cp4.1LG14g03640	MELO3C019390	Melon (DHL92) v3.5.1	cpemeB192
Cp4.1LG14g03640	ClCG05G009190	Watermelon (Charleston Gray)	cpewcgB208
Cp4.1LG14g03640	CSPI03G19540	Wild cucumber (PI 183967)	cpecpiB208
Cp4.1LG14g03640	Lsi05G001280	Bottle gourd (USVL1VR-Ls)	cpelsiB177
Cp4.1LG14g03640	MELO3C019390.2	Melon (DHL92) v3.6.1	cpemedB234
Cp4.1LG14g03640	CsaV3_3G019600	Cucumber (Chinese Long) v3	cpecucB0247
Cp4.1LG14g03640	Bhi01G001145	Wax gourd	cpewgoB0295
Cp4.1LG14g03640	CsGy3G019470	Cucumber (Gy14) v2	cgybcpeB317
Cp4.1LG14g03640	Carg11342	Silver-seed gourd	carcpeB0926
Cp4.1LG14g03640	Carg13179	Silver-seed gourd	carcpeB0059

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g03640	Cp4.1LG01g01690	Cucurbita pepo (Zucchini)	cpecpeB234

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g03640	Bottle gourd (USVL1VR-Ls)	cpelsiB188
Cp4.1LG14g03640	Cucumber (Gy14) v2	cgybcpeB490
Cp4.1LG14g03640	Cucumber (Chinese Long) v3	cpecucB0270
Cp4.1LG14g03640	Wax gourd	cpewgoB0309