CmoCh04G005930 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G005930
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSequence-specific DNA-binding transcription factor
LocationCmo_Chr04 : 2955833 .. 2960854 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTTTCTCCGCTTCTTCTTCTTCTACCTCCTCCGCTTTTGTTCGTTTTCTTTATCTGAATGATGCGTTTGTGATGCATGTTGATGTTGGTGCTGGAAATTTTTCTTAGCTCAATTTCTGTGTTTATTGGCTTGATTGTTTGTTGATTCTTGTGGTTGTTTTGTTCGTTTCATGGAGGGTTCTAATCGTGTTCTTCTGAACTGATTGGCTGTTCTTCTGCTTTCTTTCTGTCTATTTTCCATTCCATTTCTTGTTCTACTGGTAATTGTGCTTTTCCCCTTTTGAACTTTGATGTCTGTTTCCCAATTATTGCTTAGAGTTGATGCTATGGTTAGTTTAGGTAGCTGCATGTAAATAAGAACTGTTGAAAGGGGGCTTGTGGGGCTTGTTGGATAGCGATAATTTGGAAGAAGAGTGTCCTTTTCCAGCTTGAGTTTTGACAAAATTTGTATAGATCTAATTCAATCTGCTAGAAGTTCATTAGTTTTGCTGCTGGATGCTGTTTATTCTACAAGGAATTGATAATGACTTTAATCAAATGAAGTTTTTATTGCTTGCTCTAAGGCTATTACTATAGTTCTTTCTTGACTTAGTACTCAGATACTCAGATAGGGTATGCTTCCTCGAAGCTGCCGGTGCTGTAACGTTTGGTTCTTATTTTGATTAAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGGTGGACATTCTACATTGCTTACTATGACTTCTATATGATTTGAATTGCTCTTTTTGGGTAGAGAATAATTTGTTTGTGTTCTTTGTAGTGAATCGGTTGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTATGGTGGCCGTACTTGACGTTTATATGATAGGTAATGGCGTTTTACTGATTATTATTGTTATTTTGTAGGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGTATTAAAAAAATCGCTATGTTTTATCAATGTTTAAGTATTTTCATTTTCTTATCCGTTTTTTTCTCTTATCATATGTTTGTTATTAGCTTATTGTTACGAAATCTATCGTAGTAGTAGAACGGCATCTGTTAAAAGCCTCTGTCTGGGCTAACATCATCATTTCAAAACTTTTCCTCTTTTGGTCGCTAGTCAGGGAGCTTTTATGGCCTTTAATCTTCATTTTAAGTACTGTTCTTATGAGATTTCTATGAAAAAACCAATTGCAAAGTGGCTGCTTGCAAGTTTCCTGCGTTCAAAAGATCCTACTCTGTACAAAAAGAAGTTAGATGTTTTTTTTATAATGCCAGGGTTTATCGCACAAGTATTGTTTTTTCAATTGGAACGTACTGTTTATGGTATTCGAGCAAAAAGTTTGTATGGTGTAACAATCCAAGCCTATCGCTAGTAGATATTATTCTCTTTAGCTTGTTACGTATTGTCGTCAGCCTCAGGGTTTTAAAGTGCGTCTACTAGGGAGGTTTCCATACCCTTATAAGGAATGTTTCGTTTCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCTACTCCTAGGGGGCCCAGCGTCCTCACTAGCACACCGTCCGGTGTCTAGCTCTGATACCATTTGTAACATCTCAAATCTACCACTAGTAGATAGTGTCTGCTTTGACCCATTATGTATCGTTGTTAGCCTCACGGTTTTAAATACATTTACTAGGGAGAGATTTCAACTCCCTTATAAGGAATGCTTCGTTCCTCTCTCCAACCAAGTTGAGATCTCACAATCCACTCCCCTTGGTGGCCCAGCGTCTTTGCTGGCACACCGCCTGGTGTCTATCTCTAATACCATTTGTTGCCCAAGCCCACCACTAGCAGATATTGTCCTTGGCCCGTTACATATCGCCGTCAACTTCACAGTTTTAAGACGCATCTACTAGGATGATGTTTCTATACCCTTATAAGGAATGCTTCGTTTCCATTTCCAACCAATGTGAGATCTTAGTCTTGATATACCTTATTCCATAATATTGTTCCCATTTCCTATCCCACGATGGTTATCAATACAAACTTTCTCAATCCTAGAGTTTCAAGTATTAGAAATCGATGATAAATTGTTTTTCTGTAAATCATGGGCTGACCATGTTTATGGCCTGTGAAGAACCATAATTTTTAAAATGACATGGTGTGGAGAGCTATGAACCACAGATACATTATTTGGATAGCATGTGATTCTAGATTTGCTTTTTAAAGATGATTCATATTTAAACGTGTTGGTATCAACATCTTTTAATTTTTCATTCAATTTCTGTACCAAATTCCAGGACCCCTAAAGCGTGCTCCAGAAAATCCATTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTTAGTATAGCTTGTCTTCTGCTTTAGGATGATAAACTTCTTCATGACAGGCGTAGATGAACAATTGTACACATGTTTTCGTCACATTAAAAGTCGATAATTGATTCTTTTAACCGTTCATGATATGTTTCAGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGTAATTTTGCACTCATTCCCTTGCACGCATGTTATTCTTCAACCTATTTTCTGATCAGTTATTCATGCTTGAATTATTTATGCTTTATGAAAACCGAACACGGAAGTATTAAGCCAAATAGTTCTTGTACGGCCGCTCTCTCCATTTATAGAAAAACATTACAGTTTGTGGTCTCTACTGTCTTCTATCTCAACGATCGGGCCTGATGTCAAGGGCCTCTGGATTCATTACTGTGTTTGTGGGTTCAAAATCTTTTGGATCACATTCTCAATCCTATGAGTTTCCAAGTATTTTACGAGTTCTTGAAATATTTTGACTTGTGACTGTTAATATTGCCCTGGATTTTTCTCCACCTAATCCTTTTCTCCTTCACTACCTCTGAGTTTGCAACATCATATTGAATGTTAACCAACAACACCTTATGTAACCGCCCAAGCCCACCGCTAGCGGATATTGTCCTCTTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGTTGAGGTTTCCACACCTTTATAAAGATGGCTTCGTTCTCTCCTCCCCAATAAATGTGGAATCTCACACATTATTTGGCCAATATTTTGGCGTTTCTCTAAAATGCTCCAAGATATGTAGTTGATTGTAACTCAAAAGTTTGTCTCCGATTTGTTTTTTCCGGTAGAACAAATGTTGGGGTAGTAGGGGTTTGATCCTTGAACTTCAAAGGAACGAGTAGATGCCTTAACCATTGGGCTATGCTTATGATTTGTAAAGATATCAAATGCTTCGTTTTGTTTGCGTTCATCTGAGTCCCTGCACTGCCTATAAATTGTTGTTTGCCAGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCTCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGTAAAAACTTTTATTTTCCCTTGAAGCGAGGCCTTTCGATCACCTTCTTGCTATTGATTCAGGATAATCTCGTTTACTAGATCTTTCGATATTGGACATATAATTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGTGCGTATCTTCTTCATGAACGCAAAACTGCATGAATTGTGATATGTTCATAAACGTCTAACTTAATCATGCACTCAAATGCTGTTTAGGATTCTATAATTGACTTGGCTTGCTCTAAATGAATGTTAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAAACCGACCACAGGTTGCTACAGCTTCATGCTGCAAACGAAGCAGCATCGATGGAGCCCTCAAGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAGGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAGTAACTAACAGCGCCCCAGCTGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGACCAGCTCTGTGTCTGGTATGTCAGCAGACAATGTGTCTGAATGGGAAGTTAGTTGATTATGGAAAAACTTCCTTCCATCAGTCTAATCTTAACCGAACCTATCAATTTAAAATTTTGCCCGACTCGTTTTTTTAGGATGAGTAAATACACAGTGAAGTCTGTTTTTGCCCCATGTTTCAAAGTGATAGCTTCCCATCCACTTGCTGTGAATGCTGAACGTTCTCGACCGATGAAACATGCAGGAGCCACACCTCGATCGTAGTATCGAACAGGTCAGAGGCATCATCTCTCTTGTTTTACTTTTTTCTTCTCTGCTTAGCCAAGCCAAACCAAACCAAACCAAACCATGGCTCTACACTGATCATATATCTTACTGCTTAGTTTTCCCATAGAGCTTTGCTGATTACCAAATTTTACTAACGATATCGATGCACTCGACAAAGGGTTCTCTTCGAATCGTTAAATGCCATGTGAAAAACTGGACTTGTTTGTGTACCTTTGGCTGAAGGGCAGTCAACTTAATGCATTACAGGAACCTTTAGATATACATTCTTTCTGTTCTGTTCAAGAAAAGTCCTTTCGGACTCGACTCGAC

mRNA sequence

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTTTCTCCGCTTCTTCTTCTTCTACCTCCTCCGCTTTTGTTCGTTTTCTTTATCTGAATGATGCGTTTGTGATGCATGTTGATGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGTGAATCGGTTGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGACCCCTAAAGCGTGCTCCAGAAAATCCATTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCTCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAAACCGACCACAGGTTGCTACAGCTTCATGCTGCAAACGAAGCAGCATCGATGGAGCCCTCAAGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAGGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAGTAACTAACAGCGCCCCAGCTGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGACCAGCTCTGTGTCTGGATGAGTAAATACACAGTGAAGTCTGTTTTTGCCCCATGTTTCAAAGTGATAGCTTCCCATCCACTTGCTGTGAATGCTGAACGTTCTCGACCGATGAAACATGCAGGAGCCACACCTCGATCGTAGTATCGAACAGGTCAGAGGCATCATCTCTCTTGTTTTACTTTTTTCTTCTCTGCTTAGCCAAGCCAAACCAAACCAAACCAAACCATGGCTCTACACTGATCATATATCTTACTGCTTAGTTTTCCCATAGAGCTTTGCTGATTACCAAATTTTACTAACGATATCGATGCACTCGACAAAGGGTTCTCTTCGAATCGTTAAATGCCATGTGAAAAACTGGACTTGTTTGTGTACCTTTGGCTGAAGGGCAGTCAACTTAATGCATTACAGGAACCTTTAGATATACATTCTTTCTGTTCTGTTCAAGAAAAGTCCTTTCGGACTCGACTCGAC

Coding sequence (CDS)

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTTTCTCCGCTTCTTCTTCTTCTACCTCCTCCGCTTTTGTTCGTTTTCTTTATCTGAATGATGCGTTTGTGATGCATGTTGATGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGTGAATCGGTTGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGACCCCTAAAGCGTGCTCCAGAAAATCCATTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCTCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAAACCGACCACAGGTTGCTACAGCTTCATGCTGCAAACGAAGCAGCATCGATGGAGCCCTCAAGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAGGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAGTAACTAACAGCGCCCCAGCTGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGA
Homology
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BLAST of CmoCh04G005930 vs. Swiss-Prot
Match: SHH2_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.9e-97
Identity = 198/368 (53.80%), Postives = 239/368 (64.95%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRF  PEV                             EMEAIL  HN  
Sbjct: 1   MGRPPSNGGPAFRFILPEV----------------------------TEMEAILLQHNTA 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MP R +L +LA KFSES ERKGK+ VQ KQ+WNWFQNRRYA+RA+  K PGKL  S + +
Sbjct: 61  MPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRARGNKAPGKLNVSSMPR 120

Query: 121 VEST-------PPRNVPQTI--------VVPAPT---LVGPLKRAPENPLSEFEAKSGRD 180
           ++          P +VP+T         + PAP+   + G ++   +N   EFEAKS RD
Sbjct: 121 MDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGSLVPGVMRSGSDNSYLEFEAKSARD 180

Query: 181 GAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLP 240
           GAWYDV  FL+HR++E GDPEV VRFAGF  +EDEW+NV++++R RSLPCE+SECVAVL 
Sbjct: 181 GAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVLA 240

Query: 241 GDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRP 300
           GDL+LCFQEGK+QALYFDA VLD QRRRHDVRGCRCRFLVRY HDQSEEIV LRKICRRP
Sbjct: 241 GDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEEIVPLRKICRRP 300

Query: 301 ETDHRLLQLH-AANEAASMEPSR------SGMDSVLLSGQTISFEATQ----RLLNKDAT 340
           ETD+RL QLH A N+ A+    +      +    + L G T+   A +     L    AT
Sbjct: 301 ETDYRLQQLHNAVNDLANSNQHQIPALDAAAKTPLSLPGATVPIVAPESKDPSLSATPAT 340

[Close]
BLAST of CmoCh04G005930 vs. Swiss-Prot
Match: SHH1_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.9e-43
Identity = 102/245 (41.63%), Postives = 147/245 (60.00%), Query Frame = 1 

Query: 46  DVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNR-RYAIRA 105
           ++ +ME + +   +    ++   ++A  FS SV R GK ++  KQV  WFQ + ++  + 
Sbjct: 18  EIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQP 77

Query: 106 KTTKVPGKLAGSPIVQVE-----STPPRNVPQTIVVPAPTLVGPLK-RAPENPLSEFEAK 165
           K+  +P     SP +Q+      S+   N      V   T V   K +A +     FEAK
Sbjct: 78  KSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFEAK 137

Query: 166 SGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECV 225
           S RD AWYDV++FL++R + +G+ EV VRF+GF +  DEWVNV+ ++R RS+P E SEC 
Sbjct: 138 SARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECG 197

Query: 226 AVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKI 284
            V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C FLVRY+ D +EE + L +I
Sbjct: 198 RVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERI 257

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BLAST of CmoCh04G005930 vs. TrEMBL
Match: A0A0A0LC67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236580 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.6e-159
Identity = 297/374 (79.41%), Postives = 316/374 (84.49%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRFTA EV                            AEMEAILQGHNNT
Sbjct: 1   MGRPPSNGGPAFRFTASEV----------------------------AEMEAILQGHNNT 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MP+REVLV+LA KFSESVERKGKIAVQMK      QNRRYAIRAKT+K PGKLA SP+VQ
Sbjct: 61  MPAREVLVALADKFSESVERKGKIAVQMK------QNRRYAIRAKTSKAPGKLAVSPVVQ 120

Query: 121 VESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180
           +ESTP RNVPQT+VVPAP  VG  K APENPLSEFEAKSGRDGAWYDVATFLSHRSVESG
Sbjct: 121 IESTPVRNVPQTVVVPAPAPVGSAKGAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180

Query: 181 DPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240
           DPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD
Sbjct: 181 DPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240

Query: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAANEAASM 300
           AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL QLHA NEAAS+
Sbjct: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASI 300

Query: 301 EPSRSGMDSVLLSGQTISFEATQRLLNKDATIVIPNANANINVHAQTSTQEARNTVTNSA 360
           EPS+SGMDSVLLSGQ I+FE +Q  L+KDA +VIPNAN +IN HAQTSTQEARNT TN+A
Sbjct: 301 EPSKSGMDSVLLSGQRINFETSQNPLSKDAALVIPNANPHINAHAQTSTQEARNTETNTA 340

Query: 361 PAVFNAGNHAGSSA 375
           P  FN+ N AGSSA
Sbjct: 361 PTTFNSANLAGSSA 340

[Close]
BLAST of CmoCh04G005930 vs. TrEMBL
Match: M5WG16_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007389mg PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 6.0e-119
Identity = 244/387 (63.05%), Postives = 277/387 (71.58%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRFT  EV                            +EMEAILQ HNNT
Sbjct: 1   MGRPPSNGGPAFRFTQSEV----------------------------SEMEAILQQHNNT 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MP+REVLV+LA KFSES ERKGKIAVQMKQVWNWFQNRRYAIRAK++KV GKL  SP+ +
Sbjct: 61  MPAREVLVALADKFSESAERKGKIAVQMKQVWNWFQNRRYAIRAKSSKVLGKLNVSPMSR 120

Query: 121 VESTPPRNVPQ---TIVVP--APTLVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHR 180
            +S P RNVPQ    I  P  AP+  G  K A EN + EFEAKSGRDGAWYDVA FLSHR
Sbjct: 121 DDSNPVRNVPQGPQPIAAPIHAPSAQGSGKGASENSIFEFEAKSGRDGAWYDVANFLSHR 180

Query: 181 SVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQ 240
            +E+GDPEVLVRFAGFG +EDEWVNVR+++R RSLPCESSECVAVLPGDLILCFQEGKEQ
Sbjct: 181 YLETGDPEVLVRFAGFGPEEDEWVNVRKHVRQRSLPCESSECVAVLPGDLILCFQEGKEQ 240

Query: 241 ALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAAN 300
           ALYFDAHVLD QRRRHDVRGCRCRFLVRY HDQSEEIV LRK+CRRPETD+RL QLHA N
Sbjct: 241 ALYFDAHVLDAQRRRHDVRGCRCRFLVRYVHDQSEEIVPLRKVCRRPETDYRLQQLHAVN 300

Query: 301 EAASMEPSRSGMDSVLLSGQTISFEATQRLLNKDATIVIPNANANINVHAQTSTQEAR-- 360
           EAAS E  +  MD  +  G   S E  Q+  N DA    P  +AN ++  Q++T E +  
Sbjct: 301 EAASAE--QKSMDHFM--GSVTSAEMMQKQQNTDAASAPPVLHANASLATQSTTPEFKGS 355

Query: 361 --NTVTNSAPAVFNAGNHAGSSASRAV 379
             +TV +S  + F  G+   +S +  V
Sbjct: 361 EVSTVISSGNSNFPPGSAVITSGTATV 355

[Close]
BLAST of CmoCh04G005930 vs. TrEMBL
Match: W9RI10_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012170 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 6.6e-118
Identity = 234/377 (62.07%), Postives = 265/377 (70.29%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPP NGGPAFRFTA EV                            AEMEAILQ HNNT
Sbjct: 1   MGRPPGNGGPAFRFTASEV----------------------------AEMEAILQEHNNT 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MP+RE+LV LA KFSESVERKGKI VQMKQVWNWFQNRRYAIRAK ++  G L+ S + +
Sbjct: 61  MPAREILVDLADKFSESVERKGKIMVQMKQVWNWFQNRRYAIRAKLSRNLGMLSVSSMPR 120

Query: 121 VESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180
            + TP RNVPQ I  P P   G  + A EN + EFEAKSGRDGAWYDVA F SHR +ESG
Sbjct: 121 DDPTPVRNVPQAITAPIPAPSGTGRGASENSIMEFEAKSGRDGAWYDVANFFSHRYLESG 180

Query: 181 DPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240
           DPEVLVRF GFG ++DEWVN+R+++R RSLPCESSECVAVLPGDLILCFQEGKEQALYFD
Sbjct: 181 DPEVLVRFVGFGPEDDEWVNIRKHVRQRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240

Query: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAANEAASM 300
           AHVLD QRRRHDVRGCRCRFLVRYDHDQSEEIV LRK+CRRPETD+RL QL+A NEAAS 
Sbjct: 241 AHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLYAVNEAASA 300

Query: 301 EPSRSGMDSVLLSG--QTISFEATQRLLNKDATIVIPNANANINVHAQTSTQEARNTVTN 360
           E  +S  D+    G    IS E T +L + DA +V P  +A   +  + S  E +     
Sbjct: 301 EQQKSSTDNFGGGGFRARISAETTPKLQHADAALVAPALHATAALATKASILEPKK--VE 347

Query: 361 SAPAVFNAGNHAGSSAS 376
               V +AGN    +AS
Sbjct: 361 IVNVVVDAGNSNNVTAS 347

[Close]
BLAST of CmoCh04G005930 vs. TrEMBL
Match: A0A0B2PMB5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_048524 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.2e-116
Identity = 224/358 (62.57%), Postives = 258/358 (72.07%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRFT PEV                            AEMEAILQ HNN 
Sbjct: 1   MGRPPSNGGPAFRFTQPEV----------------------------AEMEAILQEHNNA 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MPSR+VL +LA KFSES +RKGKIAVQMKQVWNWFQN+RYAIRAK++K PGKL  +P+ +
Sbjct: 61  MPSRDVLTTLAEKFSESQDRKGKIAVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPR 120

Query: 121 VE--STPPRNVPQ---TIVVPAPTLVGP--LKRAPENPLSEFEAKSGRDGAWYDVATFLS 180
            +  STP R++PQ      +PA +   P  +K  PEN + EFEAKSGRDGAWYDVATFLS
Sbjct: 121 DDYNSTPIRSMPQQPTAAPIPAASATVPTAVKATPENSVLEFEAKSGRDGAWYDVATFLS 180

Query: 181 HRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGK 240
           HR +E+ DPEVLVRFAGFG +EDEW+N+R+++RPRSLPCESSECV V+PGDLILCFQEGK
Sbjct: 181 HRYLETSDPEVLVRFAGFGPEEDEWINIRKHVRPRSLPCESSECVVVIPGDLILCFQEGK 240

Query: 241 EQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHA 300
           EQALYFDAHVLD QRRRHDVRGCRCRFLVRYDHDQSEEIV LRKICRRPETD+RL QLHA
Sbjct: 241 EQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKICRRPETDYRLQQLHA 300

Query: 301 ANEAASMEPSRSGMDSV----LLSGQTISFEATQRLLNKDATIVIPNANANINVHAQT 348
            NEAA M+  ++GMD       +   T    A    +    T  +P      N+H +T
Sbjct: 301 VNEAAPMDQQKTGMDPAANVNAVRATTTETAANVNAVRATTTETVPKQLIAANIHMET 330

[Close]
BLAST of CmoCh04G005930 vs. TrEMBL
Match: A0A0R0H5Q7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G158000 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.2e-116
Identity = 224/358 (62.57%), Postives = 258/358 (72.07%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRFT PEV                            AEMEAILQ HNN 
Sbjct: 1   MGRPPSNGGPAFRFTQPEV----------------------------AEMEAILQEHNNA 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MPSR+VL +LA KFSES +RKGKIAVQMKQVWNWFQN+RYAIRAK++K PGKL  +P+ +
Sbjct: 61  MPSRDVLTTLAEKFSESQDRKGKIAVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPR 120

Query: 121 VE--STPPRNVPQ---TIVVPAPTLVGP--LKRAPENPLSEFEAKSGRDGAWYDVATFLS 180
            +  STP R++PQ      +PA +   P  +K  PEN + EFEAKSGRDGAWYDVATFLS
Sbjct: 121 DDYNSTPIRSMPQQPTAAPIPAASATVPTAVKATPENSVLEFEAKSGRDGAWYDVATFLS 180

Query: 181 HRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGK 240
           HR +E+ DPEVLVRFAGFG +EDEW+N+R+++RPRSLPCESSECV V+PGDLILCFQEGK
Sbjct: 181 HRYLETSDPEVLVRFAGFGPEEDEWINIRKHVRPRSLPCESSECVVVIPGDLILCFQEGK 240

Query: 241 EQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHA 300
           EQALYFDAHVLD QRRRHDVRGCRCRFLVRYDHDQSEEIV LRKICRRPETD+RL QLHA
Sbjct: 241 EQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKICRRPETDYRLQQLHA 300

Query: 301 ANEAASMEPSRSGMDSV----LLSGQTISFEATQRLLNKDATIVIPNANANINVHAQT 348
            NEAA M+  ++GMD       +   T    A    +    T  +P      N+H +T
Sbjct: 301 VNEAAPMDQQKTGMDPAANVNAVRATTTETAANVNAVRATTTETVPKQLIAANIHMET 330

[Close]
BLAST of CmoCh04G005930 vs. TAIR10
Match: AT3G18380.2 (AT3G18380.2 sequence-specific DNA binding transcription factors;sequence-specific DNA binding)

HSP 1 Score: 352.8 bits (904), Expect = 2.6e-97
Identity = 198/369 (53.66%), Postives = 239/369 (64.77%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRF  PEV                             EMEAIL  HN  
Sbjct: 1   MGRPPSNGGPAFRFILPEV----------------------------TEMEAILLQHNTA 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MP R +L +LA KFSES ERKGK+ VQ KQ+WNWFQNRRYA+RA+  K PGKL  S + +
Sbjct: 61  MPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRARGNKAPGKLNVSSMPR 120

Query: 121 VEST-------PPRNVPQTI--------VVPAPT---LVGPLKRAPENPLSEFEAKSGRD 180
           ++          P +VP+T         + PAP+   + G ++   +N   EFEAKS RD
Sbjct: 121 MDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGSLVPGVMRSGSDNSYLEFEAKSARD 180

Query: 181 GAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLP 240
           GAWYDV  FL+HR++E GDPEV VRFAGF  +EDEW+NV++++R RSLPCE+SECVAVL 
Sbjct: 181 GAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKKHVRQRSLPCEASECVAVLA 240

Query: 241 GDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSE-EIVQLRKICRR 300
           GDL+LCFQEGK+QALYFDA VLD QRRRHDVRGCRCRFLVRY HDQSE EIV LRKICRR
Sbjct: 241 GDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEQEIVPLRKICRR 300

Query: 301 PETDHRLLQLH-AANEAASMEPSR------SGMDSVLLSGQTISFEATQ----RLLNKDA 340
           PETD+RL QLH A N+ A+    +      +    + L G T+   A +     L    A
Sbjct: 301 PETDYRLQQLHNAVNDLANSNQHQIPALDAAAKTPLSLPGATVPIVAPESKDPSLSATPA 341

[Close]
BLAST of CmoCh04G005930 vs. TAIR10
Match: AT1G15215.2 (AT1G15215.2 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1))

HSP 1 Score: 176.4 bits (446), Expect = 3.3e-44
Identity = 102/245 (41.63%), Postives = 147/245 (60.00%), Query Frame = 1 

Query: 46  DVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNR-RYAIRA 105
           ++ +ME + +   +    ++   ++A  FS SV R GK ++  KQV  WFQ + ++  + 
Sbjct: 18  EIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQP 77

Query: 106 KTTKVPGKLAGSPIVQVE-----STPPRNVPQTIVVPAPTLVGPLK-RAPENPLSEFEAK 165
           K+  +P     SP +Q+      S+   N      V   T V   K +A +     FEAK
Sbjct: 78  KSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFEAK 137

Query: 166 SGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECV 225
           S RD AWYDV++FL++R + +G+ EV VRF+GF +  DEWVNV+ ++R RS+P E SEC 
Sbjct: 138 SARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECG 197

Query: 226 AVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKI 284
            V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C FLVRY+ D +EE + L +I
Sbjct: 198 RVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERI 257

[Close]
BLAST of CmoCh04G005930 vs. NCBI nr
Match: gi|778680368|ref|XP_011651298.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 594.0 bits (1530), Expect = 1.9e-166
Identity = 303/374 (81.02%), Postives = 322/374 (86.10%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRFTA EV                            AEMEAILQGHNNT
Sbjct: 1   MGRPPSNGGPAFRFTASEV----------------------------AEMEAILQGHNNT 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K PGKLA SP+VQ
Sbjct: 61  MPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQ 120

Query: 121 VESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180
           +ESTP RNVPQT+VVPAP  VG  K APENPLSEFEAKSGRDGAWYDVATFLSHRSVESG
Sbjct: 121 IESTPVRNVPQTVVVPAPAPVGSAKGAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180

Query: 181 DPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240
           DPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD
Sbjct: 181 DPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240

Query: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAANEAASM 300
           AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL QLHA NEAAS+
Sbjct: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASI 300

Query: 301 EPSRSGMDSVLLSGQTISFEATQRLLNKDATIVIPNANANINVHAQTSTQEARNTVTNSA 360
           EPS+SGMDSVLLSGQ I+FE +Q  L+KDA +VIPNAN +IN HAQTSTQEARNT TN+A
Sbjct: 301 EPSKSGMDSVLLSGQRINFETSQNPLSKDAALVIPNANPHINAHAQTSTQEARNTETNTA 346

Query: 361 PAVFNAGNHAGSSA 375
           P  FN+ N AGSSA
Sbjct: 361 PTTFNSANLAGSSA 346

[Close]
BLAST of CmoCh04G005930 vs. NCBI nr
Match: gi|659111991|ref|XP_008456010.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo])

HSP 1 Score: 591.3 bits (1523), Expect = 1.2e-165
Identity = 299/369 (81.03%), Postives = 318/369 (86.18%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRFTA EV                            AEME ILQGHNNT
Sbjct: 1   MGRPPSNGGPAFRFTASEV----------------------------AEMETILQGHNNT 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K PGKLA SP+VQ
Sbjct: 61  MPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQ 120

Query: 121 VESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180
           +ESTP RNVPQT+VVPAPT VG  K APENPLSEFEAKSGRDGAWYDVATFLSHRSVESG
Sbjct: 121 IESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180

Query: 181 DPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240
           DPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD
Sbjct: 181 DPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240

Query: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAANEAASM 300
           AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL QLHA NEAAS+
Sbjct: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASI 300

Query: 301 EPSRSGMDSVLLSGQTISFEATQRLLNKDATIVIPNANANINVHAQTSTQEARNTVTNSA 360
           EPS+SGMDSVLLSGQ I+FE  Q  L+KDA +VIPNAN +IN HAQTSTQEARNT TN+A
Sbjct: 301 EPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTSTQEARNTETNTA 341

Query: 361 PAVFNAGNH 370
           P  F++GNH
Sbjct: 361 PITFSSGNH 341

[Close]
BLAST of CmoCh04G005930 vs. NCBI nr
Match: gi|700202508|gb|KGN57641.1| (hypothetical protein Csa_3G236580 [Cucumis sativus])

HSP 1 Score: 570.5 bits (1469), Expect = 2.2e-159
Identity = 297/374 (79.41%), Postives = 316/374 (84.49%), Query Frame = 1 

Query: 1   MGRPPSNGGPAFRFTAPEVFSASSSSTSSAFVRFLYLNDAFVMHVDVAEMEAILQGHNNT 60
           MGRPPSNGGPAFRFTA EV                            AEMEAILQGHNNT
Sbjct: 1   MGRPPSNGGPAFRFTASEV----------------------------AEMEAILQGHNNT 60

Query: 61  MPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQ 120
           MP+REVLV+LA KFSESVERKGKIAVQMK      QNRRYAIRAKT+K PGKLA SP+VQ
Sbjct: 61  MPAREVLVALADKFSESVERKGKIAVQMK------QNRRYAIRAKTSKAPGKLAVSPVVQ 120

Query: 121 VESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180
           +ESTP RNVPQT+VVPAP  VG  K APENPLSEFEAKSGRDGAWYDVATFLSHRSVESG
Sbjct: 121 IESTPVRNVPQTVVVPAPAPVGSAKGAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESG 180

Query: 181 DPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240
           DPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD
Sbjct: 181 DPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFD 240

Query: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAANEAASM 300
           AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL QLHA NEAAS+
Sbjct: 241 AHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASI 300

Query: 301 EPSRSGMDSVLLSGQTISFEATQRLLNKDATIVIPNANANINVHAQTSTQEARNTVTNSA 360
           EPS+SGMDSVLLSGQ I+FE +Q  L+KDA +VIPNAN +IN HAQTSTQEARNT TN+A
Sbjct: 301 EPSKSGMDSVLLSGQRINFETSQNPLSKDAALVIPNANPHINAHAQTSTQEARNTETNTA 340

Query: 361 PAVFNAGNHAGSSA 375
           P  FN+ N AGSSA
Sbjct: 361 PTTFNSANLAGSSA 340

[Close]
BLAST of CmoCh04G005930 vs. NCBI nr
Match: gi|778680371|ref|XP_011651299.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 569.3 bits (1466), Expect = 5.0e-159
Identity = 283/325 (87.08%), Postives = 302/325 (92.92%), Query Frame = 1 

Query: 50  MEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKV 109
           MEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K 
Sbjct: 1   MEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 110 PGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVA 169
           PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K APENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAPENPLSEFEAKSGRDGAWYDVA 120

Query: 170 TFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 229
           TFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 230 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 289
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 290 QLHAANEAASMEPSRSGMDSVLLSGQTISFEATQRLLNKDATIVIPNANANINVHAQTST 349
           QLHA NEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+KDA +VIPNAN +IN HAQTST
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 350 QEARNTVTNSAPAVFNAGNHAGSSA 375
           QEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 QEARNTETNTAPTTFNSANLAGSSA 325

[Close]
BLAST of CmoCh04G005930 vs. NCBI nr
Match: gi|659111993|ref|XP_008456011.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo])

HSP 1 Score: 566.6 bits (1459), Expect = 3.2e-158
Identity = 279/320 (87.19%), Postives = 298/320 (93.12%), Query Frame = 1 

Query: 50  MEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKV 109
           ME ILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K 
Sbjct: 1   METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 110 PGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVA 169
           PGKLA SP+VQ+ESTP RNVPQT+VVPAPT VG  K APENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 120

Query: 170 TFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 229
           TFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 230 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 289
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 290 QLHAANEAASMEPSRSGMDSVLLSGQTISFEATQRLLNKDATIVIPNANANINVHAQTST 349
           QLHA NEAAS+EPS+SGMDSVLLSGQ I+FE  Q  L+KDA +VIPNAN +IN HAQTST
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 350 QEARNTVTNSAPAVFNAGNH 370
           QEARNT TN+AP  F++GNH
Sbjct: 301 QEARNTETNTAPITFSSGNH 320

The following BLAST results are available for this feature:
BLAST of CmoCh04G005930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SHH2_ARATH1.9e-9753.80Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1[more]
SHH1_ARATH5.9e-4341.63Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1[more]
BLAST of CmoCh04G005930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC67_CUCSA1.6e-15979.41Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236580 PE=4 SV=1[more]
M5WG16_PRUPE6.0e-11963.05Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007389mg PE=4 SV=1[more]
W9RI10_9ROSA6.6e-11862.07Uncharacterized protein OS=Morus notabilis GN=L484_012170 PE=4 SV=1[more]
A0A0B2PMB5_GLYSO1.2e-11662.57Uncharacterized protein OS=Glycine soja GN=glysoja_048524 PE=4 SV=1[more]
A0A0R0H5Q7_SOYBN1.2e-11662.57Uncharacterized protein OS=Glycine max GN=GLYMA_12G158000 PE=4 SV=1[more]
BLAST of CmoCh04G005930 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18380.22.6e-9753.66 sequence-specific DNA binding transcription factors;sequence-specifi... [more]
AT1G15215.23.3e-4441.63 BEST Arabidopsis thaliana protein match is: sequence-specific DNA bi... [more]
BLAST of CmoCh04G005930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680368|ref|XP_011651298.1|1.9e-16681.02PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis sativus][more]
gi|659111991|ref|XP_008456010.1|1.2e-16581.03PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo][more]
gi|700202508|gb|KGN57641.1|2.2e-15979.41hypothetical protein Csa_3G236580 [Cucumis sativus][more]
gi|778680371|ref|XP_011651299.1|5.0e-15987.08PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis sativus][more]
gi|659111993|ref|XP_008456011.1|3.2e-15887.19PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003682chromatin binding
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G005930.1CmoCh04G005930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 47..105
score: 8
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 47..106
score: 9.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 49..105
score: 2.3
NoneNo IPR availablePANTHERPTHR33827FAMILY NOT NAMEDcoord: 2..18
score: 2.3E-182coord: 47..364
score: 2.3E
NoneNo IPR availablePANTHERPTHR33827:SF3PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2coord: 2..18
score: 2.3E-182coord: 47..364
score: 2.3E