Cp4.1LG01g01690 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g01690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Sequence-specific DNA-binding transcription factor
Location	Cp4.1LG01 : 2887891 .. 2893113 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGTTTTAGTTCTTTTTTGAGGTACACAATTTTGATATTTGGTACGGAATCACCTGGGCATTTTGTTTTGCCCCCCAAAACCATGAATTTTGGGCTTAAAGCTTCAATTTCTCTCTCTATCATCATCATCATATATGTGTATATATATATGTATCGATGCACATTTATTTATATAGTCGCTCAAAGTTTTCCCGAAATAACGAATTTCTGAAGACGGGATCTTCAATTCTGAATTTTTTCTTGGTACTTTTTTCTCAGTTTCTCTCTTTGATTCTTTGATAGTGACGGCGAAATCAGTGAAACCACACAGGGAAGCTTAGCTTATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTTTTCTCCGCTTCTTCTTCTTCTACTTCCTCCGCTTTTGTTCGTTTTCTTTATCTGAATGATGCGTTTGTGATGCATGTTGATTTTGGTGCTGGAAATTTTTCTTAGCTCAATTTCTGTGTTTATTGGCTTGATTGTTTGTTGATTCTTGTGGTTGTTTTGTTCGTTTCATGGAGGGTTCTAATCGTGTTCTTCTGAACTGATTGACTGTTCTTCTGCTTTCTTTTTTGATTATTTTCCATTCCATTTCTTGTTCTACTGGTAATTGTGCTTTTCCCCTTTTGAATTTTGATGTCTGTTTCCTAATTACTGCATAGAGTTGATGCTGTGGTTAGTTTAGGTAGCTGCATGTAAATAAGAACTGTTGAAAGGGGGCTTGTGGGGCTTGTTGGATAGCGATAATTTGGAAGAAGAGTGTCCTTTTCGAGCTTGAGTTTTGACAAAATTTGTATAGATCTAATTCAATCTGCTAGAAGTTCATTAGTTTTGCTGCTGGATGCTGTTTATTCTACAAGGAATTGATAATGACTTTAATCAAATGAAGTTTTTATTGCTTGCTCTAAGGCTATTACTATAGTTCTTTCTTGACTTAGTACTCAGATAGGGTACGCTTCCTCGAAGCTGCTGGTGCTGTAACGTTCGGTTCTTATTTTGATTAAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGGTGGACATTCTACATTGCTTACTGTGACTTTTATATGATTTGAATTGCTCTTTTGGTGTAGAGAATAATTTGTTTATGTTGTTTGTAGTGAATCGGTCGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTATGGTGGCCGTACTTGACGTTTATATGATAGGTAATGGTGATTTACTAATTATTGTTGTTATTTTGTAGGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGTATTAAAAAAATCGCTATGTTTTATCAATGTTTAAATATTTTCATTTTCTTATCCTTTTTTTTTCTCTTATCATATGTTTGTTATTAGCTTATTGTTACGAAATCTATCGTAGTAGTAGAATGGCATCTGCTAAACGCCTCTGTCTGGGCTAACATCATCATTTCAAAACTTTTCCTCTTTTCGTCGCTAGTCAGGTGAGGAGGTATATCTGGAAGCATGGGAGCTTTTATGGCCTTTAATCTTCATTTTAAGTACTGTTCTTATGAGATTTCTATGAAAAAACCAATTGCAAAGTGGCTGCTTGCAAGTTTCCTACGTTCAAAAGATCCTACTCTGTACAAAAAGAAGTTAGATGTTTTTTATAATGCCAGGGTTTATCGCACAAGTATTGTTTTTTCAATTGGAACGTATTGTTTATGGTATTCGAGCAAAAAGTTTGTATGGTGTAACAACCCAAGCCCATTGCTAGTAGATATTATCTGTTTTGGCCTGTTATGTATTGTTGTCAGCCTCACGGTTTTAAAGCGCGTCTACTAGGGAGGTTTCCATACCCTTATAAGGAATGTTTCATTTCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCTACCCCTAGGGGCTCAGCATCCTCACTAGCACACCGTCCGGTGTCTAGCTCTGATACCATTTGTAACATCTCAAATCTACCGCTAGTAGGTAGTGTCCGCTTTGACCCATTATGTATCATCGTTAGCCTCATGGTTTTAAATACATCTACTAGGGAGAGATTTCAACCCTCTTATAAGGAATGGTTTGTTCCCCTCTCCAACCAAGGTGAGATCTCACAATCTACTCCCCTTGGTGGCTCGGCGTCTTTGTTGGCACACCGCCTGGTGTCTGTGTCTAATATCATTTGTTGCCCAAGCCCACCACTAGTAGATATTGTTCTTGGCTCGTTACGTATCGCCGTTAACTTCACGGTTTTAAAATGTATCTACTAGGATGATGTTTCTATACCCTTATAAGGAATGCTTCGTTCCCATTTCCAACCAATGTGAGATCTTAGTCTTGATATACCTTATTCCATTATATTGTTGTAGTTAACTTAAATCTCCAAATATGTTATAAAAAGTATGAGAAATCGATGATAAATTGTTTTTCTGTAAATCATGGGCTGACCATGTTTATGGCCTGTGAAGAACCATAATCTTTAAAATGACATGGTGTGGAAAGATGTGAACCACAGATACATTAGTTTGGATAGCATGTGATTCTAGATTTGCTTTTTAAAGATGATTCATATTTAAACATGTTGGTATCAACTTCTTTTAATTTTTCATTCAATTTCTGTACCAAATTCCAGGACCCCTAAAGCGTGCTTCAGAAAATCCACTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTTAGTATAGCTTGTCTTCTGCTTTAGGATGATAAACTTCTTCACGACAGGCGTAGATGATTGATTCTTTTAACTGTTCATGATATGTTTCAGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGTAATTCTGCACTCATTCCCTTGCACGCACGTTATTCTTCAACCTATTTTCTGATCAGTTATTCATGCTCGAATTATTTTGCTTTATGAAAACCGAACACGGAAGTATTAAGCCAAATAGTTCTTGTACGGCCGCTCTCTCCATTTATAGAAAAACATTACAGTTTGTGGTCTCTACTGTCTTGTACTGTGTTTGTGGGTTCAAGATCTTTTGGATCACATTCTCAATCCTATGAGTTTCTAAGTATTTTATGAGTTCTCGAAATATTTTGACTTGTGAGAGTTAATATTGCCCTGGATTTTTCTCCACCCAATCCTTTTCTCCTCACTACCTCTGAGTTTGCAACATCATATTGAATGTTAACCAACAACACCTTGTGTAACCGCCCAAGCCCACCGCTAGCGGATATGGTCCTTTTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGATGACTTCGTTCTCTTCCCCAACAAATGTGGAATCTCACACATTATTTGGCCAATATTTTTGTGTTTCTCTAAAATGCTCCAAGATATGTAGTTGATTGTAACTCAAAAGTTCATCTCCGATTCGTTTTTTCCGGTAGAACAAATGTTGGGGTAGTAGGGGTTTGATCCTTGAACTTCAAAGGAACGAGTAGATGCCTTAACCATTGGGCTATGCTTATGATTTGTAAAGATATCACATGCTTCGTTTTGTTTGCGTTCATCTGAGTCCCTGCATTGCCTAAAAATTGTTGTTTGCCAGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCGCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGTAAAAACTTTTATTTTCCCTTGAAGCGAGGCCTTTCCATCACCTTCTTGCTATCGATTCAGGATAATCTCGTTTACTAGATCTTTCGATATTGGACATAATTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGACGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGTGCGTATCTTGTTCATGAACGCAATACTGCATGAATTGTGATATGTTCATAAACGTCTAACTTAATCATGCACTCAACAAATGCTGTTTAGGATTCTATAATTGACTTGGCTTGCTCTAAATGAATGTTAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAGACCGACCACAGGTTGCTACAGCTTCATGCTGTAAACGAAGCAGCATCGATGGAGCCCTCACGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAAGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAATAACTAACAGCGCCCCAGGCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGACCAGCTCTGTGTCTGGTATGTCAGCAGACAATGTGTCTGAATGGGGAAGTTAGTTGATTATGGAAAAACTTCCTTCCATCAGTCTAATCTTAACCGAACCTATCAATTTAAAATTTTGCCCGACTCGTTTTTTTAGGATGAGTAAATACACAGTGAAGTCTGTTTTTGCCCCATGTTTCAAAGTGATAGCTACCCATCCACTTGCTGTGAATGCTGAACGTTCTCGACCGATGAAACATGCAGGAGCCACACCTCGATCGTAGTATCGAACAGGTCAGAGGCATCATCTCTCTTGTTTTACTTTTTTCTTCTCTGCTTAGCCAAGCCAAACCAAACCAAACCAAACCATGGCTCTACACTGATCATATATCTTACTGCTTAGTTTTCCCATAGAGCTTTGCTGATTACCAAATGTTACTAACGATATCGATGCACTCGACAAAGGGTTCTCTTCGAATCGTTAAATGCCATGTGAAAAACTGGACTTGTTTGTGTACCTTTGGCTGAAGGGCAGTCAACTTAATGCATTACAGGAACCTTTAGATATACGTTCTTTCTGTTCT

mRNA sequence

TGGGTTTTAGTTCTTTTTTGAGGTACACAATTTTGATATTTGTGACGGCGAAATCAGTGAAACCACACAGGGAAGCTTAGCTTATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGTGAATCGGTCGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGACCCCTAAAGCGTGCTTCAGAAAATCCACTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCGCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGACGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAGACCGACCACAGGTTGCTACAGCTTCATGCTGTAAACGAAGCAGCATCGATGGAGCCCTCACGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAAGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAATAACTAACAGCGCCCCAGGCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGACCAGCTCTGTGTCTGGTATGTCAGCAGACAATGTGTCTGAATGGGGAAGTTAGTTGATTATGGAAAAACTTCCTTCCATCAGTCTAATCTTAACCGAACCTATCAATTTAAAATTTTGCCCGACTCGTTTTTTTAGGATGAGTAAATACACAGTGAAGTCTGTTTTTGCCCCATGTTTCAAAGTGATAGCTACCCATCCACTTGCTGTGAATGCTGAACGTTCTCGACCGATGAAACATGCAGGAGCCACACCTCGATCGTAGTATCGAACAGGTCAGAGGCATCATCTCTCTTGTTTTACTTTTTTCTTCTCTGCTTAGCCAAGCCAAACCAAACCAAACCAAACCATGGCTCTACACTGATCATATATCTTACTGCTTAGTTTTCCCATAGAGCTTTGCTGATTACCAAATGTTACTAACGATATCGATGCACTCGACAAAGGGTTCTCTTCGAATCGTTAAATGCCATGTGAAAAACTGGACTTGTTTGTGTACCTTTGGCTGAAGGGCAGTCAACTTAATGCATTACAGGAACCTTTAGATATACGTTCTTTCTGTTCT

Coding sequence (CDS)

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGTGAATCGGTCGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGACCCCTAAAGCGTGCTTCAGAAAATCCACTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCGCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGACGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAGACCGACCACAGGTTGCTACAGCTTCATGCTGTAAACGAAGCAGCATCGATGGAGCCCTCACGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAAGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAATAACTAACAGCGCCCCAGGCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGA

Protein sequence

MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNKDATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNHAGSSASRAVS

Homology

[Close]

BLAST of Cp4.1LG01g01690 vs. Swiss-Prot
Match: SHH2_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 9.4e-104
Identity = 200/340 (58.82%), Postives = 241/340 (70.88%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF  PEV EMEAIL  HN  MP R +L +LA KFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVEST-------PPRNVPQTI-------- 120
           KQ+WNWFQNRRYA+RA+  K PGKL  S + +++          P +VP+T         
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 VVPAPT---LVGPLKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAG 180
           + PAP+   + G ++  S+N   EFEAKS RDGAWYDV  FL+HR++E GDPEV VRFAG
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  +EDEW+NV++++R RSLPCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLH-AVNEAASMEPSR----- 300
           HDVRGCRCRFLVRY HDQSEEIV LRKICRRPETD+RL QLH AVN+ A+    +     
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPALD 300

Query: 301 -SGMDSVLLSGQTISFEATQ----KLLNKDATIVIPNANA 312
            +    + L G T+   A +     L    AT+V P++NA
Sbjct: 301 AAAKTPLSLPGATVPIVAPESKDPSLSATPATLVQPSSNA 340

[Close]

BLAST of Cp4.1LG01g01690 vs. Swiss-Prot
Match: SHH1_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-45
Identity = 106/249 (42.57%), Postives = 150/249 (60.24%), Query Frame = 1


Query: 14  FTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNR-RY 73
           FT  E+ +ME + +   +    ++   ++A  FS SV R GK ++  KQV  WFQ + ++
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73

Query: 74  AIRAKTTKVPGKLAGSPIVQVE-----STPPRNVPQTIVVPAPTLVGPLK-RASENPLSE 133
             + K+  +P     SP +Q+      S+   N      V   T V   K +AS+     
Sbjct: 74  QSQPKSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLA 133

Query: 134 FEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCES 193
           FEAKS RD AWYDV++FL++R + +G+ EV VRF+GF +  DEWVNV+ ++R RS+P E 
Sbjct: 134 FEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEP 193

Query: 194 SECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQ 253
           SEC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C FLVRY+ D +EE + 
Sbjct: 194 SECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLG 253

Query: 254 LRKICRRPE 256
           L +ICRRPE
Sbjct: 254 LERICRRPE 257

[Close]

BLAST of Cp4.1LG01g01690 vs. TrEMBL
Match: A0A0A0LC67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236580 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 4.3e-164
Identity = 297/346 (85.84%), Postives = 316/346 (91.33%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEMEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           K      QNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K A 
Sbjct: 61  K------QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNK 300
           SEEIVQLRKICRRPETD+RL QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 DATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNHAGSSA 347
           DA +VIPNAN +IN HAQTSTQEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSA 340

[Close]

BLAST of Cp4.1LG01g01690 vs. TrEMBL
Match: M5WG16_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007389mg PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-125
Identity = 246/359 (68.52%), Postives = 278/359 (77.44%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT  EV+EMEAILQ HNNTMP+REVLV+LA KFSES ERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTQSEVSEMEAILQQHNNTMPAREVLVALADKFSESAERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQ---TIVVP--APTLVGP 120
           KQVWNWFQNRRYAIRAK++KV GKL  SP+ + +S P RNVPQ    I  P  AP+  G 
Sbjct: 61  KQVWNWFQNRRYAIRAKSSKVLGKLNVSPMSRDDSNPVRNVPQGPQPIAAPIHAPSAQGS 120

Query: 121 LKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRR 180
            K ASEN + EFEAKSGRDGAWYDVA FLSHR +E+GDPEVLVRFAGFG +EDEWVNVR+
Sbjct: 121 GKGASENSIFEFEAKSGRDGAWYDVANFLSHRYLETGDPEVLVRFAGFGPEEDEWVNVRK 180

Query: 181 NIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVR 240
           ++R RSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVR
Sbjct: 181 HVRQRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVR 240

Query: 241 YDHDQSEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQ 300
           Y HDQSEEIV LRK+CRRPETD+RL QLHAVNEAAS E  +  MD  +  G   S E  Q
Sbjct: 241 YVHDQSEEIVPLRKVCRRPETDYRLQQLHAVNEAASAE--QKSMDHFM--GSVTSAEMMQ 300

Query: 301 KLLNKDATIVIPNANANINVHAQTSTQEAR----NTITNSAPGVFNAGNHAGSSASRAV 351
           K  N DA    P  +AN ++  Q++T E +    +T+ +S    F  G+   +S +  V
Sbjct: 301 KQQNTDAASAPPVLHANASLATQSTTPEFKGSEVSTVISSGNSNFPPGSAVITSGTATV 355

[Close]

BLAST of Cp4.1LG01g01690 vs. TrEMBL
Match: W9RI10_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012170 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.2e-124
Identity = 239/350 (68.29%), Postives = 269/350 (76.86%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPP NGGPAFRFTA EVAEMEAILQ HNNTMP+RE+LV LA KFSESVERKGKI VQM
Sbjct: 1   MGRPPGNGGPAFRFTASEVAEMEAILQEHNNTMPAREILVDLADKFSESVERKGKIMVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           KQVWNWFQNRRYAIRAK ++  G L+ S + + + TP RNVPQ I  P P   G  + AS
Sbjct: 61  KQVWNWFQNRRYAIRAKLSRNLGMLSVSSMPRDDPTPVRNVPQAITAPIPAPSGTGRGAS 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           EN + EFEAKSGRDGAWYDVA F SHR +ESGDPEVLVRF GFG ++DEWVN+R+++R R
Sbjct: 121 ENSIMEFEAKSGRDGAWYDVANFFSHRYLESGDPEVLVRFVGFGPEDDEWVNIRKHVRQR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSG--QTISFEATQKLL 300
           SEEIV LRK+CRRPETD+RL QL+AVNEAAS E  +S  D+    G    IS E T KL 
Sbjct: 241 SEEIVPLRKVCRRPETDYRLQQLYAVNEAASAEQQKSSTDNFGGGGFRARISAETTPKLQ 300

Query: 301 NKDATIVIPNANANINVHAQTSTQEARNT-ITNSAPGVFNAGNHAGSSAS 348
           + DA +V P  +A   +  + S  E +   I N    V +AGN    +AS
Sbjct: 301 HADAALVAPALHATAALATKASILEPKKVEIVNV---VVDAGNSNNVTAS 347

[Close]

BLAST of Cp4.1LG01g01690 vs. TrEMBL
Match: A0A0B2PMB5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_048524 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.7e-121
Identity = 224/330 (67.88%), Postives = 258/330 (78.18%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT PEVAEMEAILQ HNN MPSR+VL +LA KFSES +RKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTQPEVAEMEAILQEHNNAMPSRDVLTTLAEKFSESQDRKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVE--STPPRNVPQ---TIVVPAPTLVGP 120
           KQVWNWFQN+RYAIRAK++K PGKL  +P+ + +  STP R++PQ      +PA +   P
Sbjct: 61  KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDYNSTPIRSMPQQPTAAPIPAASATVP 120

Query: 121 --LKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNV 180
             +K   EN + EFEAKSGRDGAWYDVATFLSHR +E+ DPEVLVRFAGFG +EDEW+N+
Sbjct: 121 TAVKATPENSVLEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINI 180

Query: 181 RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFL 240
           R+++RPRSLPCESSECV V+PGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFL
Sbjct: 181 RKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFL 240

Query: 241 VRYDHDQSEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSV----LLSGQTI 300
           VRYDHDQSEEIV LRKICRRPETD+RL QLHAVNEAA M+  ++GMD       +   T 
Sbjct: 241 VRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPMDQQKTGMDPAANVNAVRATTT 300

Query: 301 SFEATQKLLNKDATIVIPNANANINVHAQT 320
              A    +    T  +P      N+H +T
Sbjct: 301 ETAANVNAVRATTTETVPKQLIAANIHMET 330

[Close]

BLAST of Cp4.1LG01g01690 vs. TrEMBL
Match: A0A0R0H5Q7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G158000 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.7e-121
Identity = 224/330 (67.88%), Postives = 258/330 (78.18%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT PEVAEMEAILQ HNN MPSR+VL +LA KFSES +RKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTQPEVAEMEAILQEHNNAMPSRDVLTTLAEKFSESQDRKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVE--STPPRNVPQ---TIVVPAPTLVGP 120
           KQVWNWFQN+RYAIRAK++K PGKL  +P+ + +  STP R++PQ      +PA +   P
Sbjct: 61  KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDYNSTPIRSMPQQPTAAPIPAASATVP 120

Query: 121 --LKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNV 180
             +K   EN + EFEAKSGRDGAWYDVATFLSHR +E+ DPEVLVRFAGFG +EDEW+N+
Sbjct: 121 TAVKATPENSVLEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINI 180

Query: 181 RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFL 240
           R+++RPRSLPCESSECV V+PGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFL
Sbjct: 181 RKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFL 240

Query: 241 VRYDHDQSEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSV----LLSGQTI 300
           VRYDHDQSEEIV LRKICRRPETD+RL QLHAVNEAA M+  ++GMD       +   T 
Sbjct: 241 VRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPMDQQKTGMDPAANVNAVRATTT 300

Query: 301 SFEATQKLLNKDATIVIPNANANINVHAQT 320
              A    +    T  +P      N+H +T
Sbjct: 301 ETAANVNAVRATTTETVPKQLIAANIHMET 330

[Close]

BLAST of Cp4.1LG01g01690 vs. TAIR10
Match: AT3G18380.2 (AT3G18380.2 sequence-specific DNA binding transcription factors;sequence-specific DNA binding)

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-103
Identity = 200/341 (58.65%), Postives = 241/341 (70.67%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF  PEV EMEAIL  HN  MP R +L +LA KFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVEST-------PPRNVPQTI-------- 120
           KQ+WNWFQNRRYA+RA+  K PGKL  S + +++          P +VP+T         
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 VVPAPT---LVGPLKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAG 180
           + PAP+   + G ++  S+N   EFEAKS RDGAWYDV  FL+HR++E GDPEV VRFAG
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  +EDEW+NV++++R RSLPCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFLVRYDHDQSE-EIVQLRKICRRPETDHRLLQLH-AVNEAASMEPSR---- 300
           HDVRGCRCRFLVRY HDQSE EIV LRKICRRPETD+RL QLH AVN+ A+    +    
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEQEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPAL 300

Query: 301 --SGMDSVLLSGQTISFEATQ----KLLNKDATIVIPNANA 312
             +    + L G T+   A +     L    AT+V P++NA
Sbjct: 301 DAAAKTPLSLPGATVPIVAPESKDPSLSATPATLVQPSSNA 341

[Close]

BLAST of Cp4.1LG01g01690 vs. TAIR10
Match: AT1G15215.2 (AT1G15215.2 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1))

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-46
Identity = 106/249 (42.57%), Postives = 150/249 (60.24%), Query Frame = 1


Query: 14  FTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNR-RY 73
           FT  E+ +ME + +   +    ++   ++A  FS SV R GK ++  KQV  WFQ + ++
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73

Query: 74  AIRAKTTKVPGKLAGSPIVQVE-----STPPRNVPQTIVVPAPTLVGPLK-RASENPLSE 133
             + K+  +P     SP +Q+      S+   N      V   T V   K +AS+     
Sbjct: 74  QSQPKSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLA 133

Query: 134 FEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCES 193
           FEAKS RD AWYDV++FL++R + +G+ EV VRF+GF +  DEWVNV+ ++R RS+P E 
Sbjct: 134 FEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEP 193

Query: 194 SECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQ 253
           SEC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C FLVRY+ D +EE + 
Sbjct: 194 SECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLG 253

Query: 254 LRKICRRPE 256
           L +ICRRPE
Sbjct: 254 LERICRRPE 257

[Close]

BLAST of Cp4.1LG01g01690 vs. NCBI nr
Match: gi|778680368|ref|XP_011651298.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 608.6 bits (1568), Expect = 6.9e-171
Identity = 303/346 (87.57%), Postives = 322/346 (93.06%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEMEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           KQVWNWFQNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K A 
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNK 300
           SEEIVQLRKICRRPETD+RL QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 DATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNHAGSSA 347
           DA +VIPNAN +IN HAQTSTQEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSA 346

[Close]

BLAST of Cp4.1LG01g01690 vs. NCBI nr
Match: gi|659111991|ref|XP_008456010.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo])

HSP 1 Score: 605.5 bits (1560), Expect = 5.8e-170
Identity = 299/341 (87.68%), Postives = 318/341 (93.26%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEME ILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           KQVWNWFQNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAPT VG  K A 
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNK 300
           SEEIVQLRKICRRPETD+RL QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE  Q  L+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSK 300

Query: 301 DATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNH 342
           DA +VIPNAN +IN HAQTSTQEARNT TN+AP  F++GNH
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPITFSSGNH 341

[Close]

BLAST of Cp4.1LG01g01690 vs. NCBI nr
Match: gi|700202508|gb|KGN57641.1| (hypothetical protein Csa_3G236580 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 6.2e-164
Identity = 297/346 (85.84%), Postives = 316/346 (91.33%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEMEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           K      QNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K A 
Sbjct: 61  K------QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNK 300
           SEEIVQLRKICRRPETD+RL QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 DATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNHAGSSA 347
           DA +VIPNAN +IN HAQTSTQEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSA 340

[Close]

BLAST of Cp4.1LG01g01690 vs. NCBI nr
Match: gi|778680371|ref|XP_011651299.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 568.2 bits (1463), Expect = 1.0e-158
Identity = 283/325 (87.08%), Postives = 302/325 (92.92%), Query Frame = 1


Query: 22  MEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKV 81
           MEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K 
Sbjct: 1   MEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRASENPLSEFEAKSGRDGAWYDVA 141
           PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K A ENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 201
           TFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 202 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 261
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 262 QLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNKDATIVIPNANANINVHAQTST 321
           QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+KDA +VIPNAN +IN HAQTST
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 322 QEARNTITNSAPGVFNAGNHAGSSA 347
           QEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 QEARNTETNTAPTTFNSANLAGSSA 325

[Close]

BLAST of Cp4.1LG01g01690 vs. NCBI nr
Match: gi|659111993|ref|XP_008456011.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo])

HSP 1 Score: 565.1 bits (1455), Expect = 8.7e-158
Identity = 279/320 (87.19%), Postives = 298/320 (93.12%), Query Frame = 1


Query: 22  MEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKV 81
           ME ILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K 
Sbjct: 1   METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRASENPLSEFEAKSGRDGAWYDVA 141
           PGKLA SP+VQ+ESTP RNVPQT+VVPAPT VG  K A ENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 201
           TFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 202 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 261
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 262 QLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNKDATIVIPNANANINVHAQTST 321
           QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE  Q  L+KDA +VIPNAN +IN HAQTST
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 322 QEARNTITNSAPGVFNAGNH 342
           QEARNT TN+AP  F++GNH
Sbjct: 301 QEARNTETNTAPITFSSGNH 320

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHH2_ARATH	9.4e-104	58.82	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1	[more]
SHH1_ARATH	3.4e-45	42.57	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g01690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC67_CUCSA	4.3e-164	85.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236580 PE=4 SV=1	[more]
M5WG16_PRUPE	1.8e-125	68.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007389mg PE=4 SV=1	[more]
W9RI10_9ROSA	1.2e-124	68.29	Uncharacterized protein OS=Morus notabilis GN=L484_012170 PE=4 SV=1	[more]
A0A0B2PMB5_GLYSO	2.7e-121	67.88	Uncharacterized protein OS=Glycine soja GN=glysoja_048524 PE=4 SV=1	[more]
A0A0R0H5Q7_SOYBN	2.7e-121	67.88	Uncharacterized protein OS=Glycine max GN=GLYMA_12G158000 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g01690 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18380.2	1.3e-103	58.65	sequence-specific DNA binding transcription factors;sequence-specifi...	[more]
AT1G15215.2	1.9e-46	42.57	BEST Arabidopsis thaliana protein match is: sequence-specific DNA bi...	[more]

BLAST of Cp4.1LG01g01690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680368\|ref\|XP_011651298.1\|	6.9e-171	87.57	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis sativus]	[more]
gi\|659111991\|ref\|XP_008456010.1\|	5.8e-170	87.68	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo]	[more]
gi\|700202508\|gb\|KGN57641.1\|	6.2e-164	85.84	hypothetical protein Csa_3G236580 [Cucumis sativus]	[more]
gi\|778680371\|ref\|XP_011651299.1\|	1.0e-158	87.08	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis sativus]	[more]
gi\|659111993\|ref\|XP_008456011.1\|	8.7e-158	87.19	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003682	chromatin binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g01690.1	Cp4.1LG01g01690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 13..74 score: 1.
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 7..81 score: 0.
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 13..77 score: 9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 13..78 score: 3.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 4..75 score: 3.68
None	No IPR available	PANTHER	PTHR33827	FAMILY NOT NAMED	coord: 2..332 score: 4.4E
None	No IPR available	PANTHER	PTHR33827:SF3	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 2..332 score: 4.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g01690	Cucsa.032420	Cucumber (Gy14) v1	cgycpeB0007
Cp4.1LG01g01690	CmaCh16G004110	Cucurbita maxima (Rimu)	cmacpeB351
Cp4.1LG01g01690	CmaCh04G005580	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g01690	CmoCh04G005930	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g01690	CmoCh16G004430	Cucurbita moschata (Rifu)	cmocpeB311
Cp4.1LG01g01690	Cla004283	Watermelon (97103) v1	cpewmB433
Cp4.1LG01g01690	Csa3G236580	Cucumber (Chinese Long) v2	cpecuB389
Cp4.1LG01g01690	MELO3C019390	Melon (DHL92) v3.5.1	cpemeB412
Cp4.1LG01g01690	ClCG05G009190	Watermelon (Charleston Gray)	cpewcgB394
Cp4.1LG01g01690	CSPI03G19540	Wild cucumber (PI 183967)	cpecpiB388
Cp4.1LG01g01690	Lsi05G001280	Bottle gourd (USVL1VR-Ls)	cpelsiB369
Cp4.1LG01g01690	MELO3C019390.2	Melon (DHL92) v3.6.1	cpemedB481
Cp4.1LG01g01690	CsaV3_3G019600	Cucumber (Chinese Long) v3	cpecucB0484
Cp4.1LG01g01690	Bhi01G001145	Wax gourd	cpewgoB0517
Cp4.1LG01g01690	CsGy3G019470	Cucumber (Gy14) v2	cgybcpeB362
Cp4.1LG01g01690	Carg11342	Silver-seed gourd	carcpeB0927
Cp4.1LG01g01690	Carg13179	Silver-seed gourd	carcpeB0061

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g01690	Cp4.1LG14g03640	Cucurbita pepo (Zucchini)	cpecpeB234

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g01690	Bottle gourd (USVL1VR-Ls)	cpelsiB380
Cp4.1LG01g01690	Watermelon (Charleston Gray)	cpewcgB406
Cp4.1LG01g01690	Watermelon (97103) v1	cpewmB410