Carg13179 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg13179
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1
Location	Cucurbita_argyrosperma_scaffold_101 : 801511 .. 807314 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGTATCGATGCACATTTATTTATATAGTCGCTCAAAGTTTTCCCGAAATAACGAATTTCTGAAGACGGGATCTTCAATTCTGATTTTTTTCTTGGTACTTTTTTTCTCAGTTTCTCTCTTTGATTCTTTGATAGTGACGGCGAAATCAGTGAAACCACACAGGGAAGCTTAGCTTATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTTTTCTCCGCTTCTTCTTCTTCTATCTCCTCCGCTTTTGTTCGTTTTCTTTATCTGAATGATGCGTTTGTGATGCATGTTGATGTTGGTGCTGGAAATTTTTCTTAGCTCAATTTCTGTGTTTATTGGCTTGATTGTTTGTTGATTCTTGTGGTTGTTTTGTTCGTTTCATGGAGGGTTCTAATCGTGTTCTTCTGAACTGATTGGCTGTTCTTCTGCTTTCTTTCTGTCTATTTTCCATTCCATTTCTTGTTCTACTGCTAATTGTGCTTTTCCCCTTTTGAATTTTGATGTTTGTTTCCCAATTATTGCATAGAGTTGATGCTATGGTTAGTTTAGGTAGCTGCATGTAAATAAGAACTGTTGAAAGGGGGCTTGTGGGGCTTGTTGGATAGCGATAATTTGGAAGAAGAGTGTCCTTTTCCAGCTTGAGTTTTGACAAAATTTGTATAGATCTAATTCAATCTGCTAGAAGTTCATTAGTTTTGCTGCTGGATGCTGTTTATTCTACAAGGAATTGATAATGACTTCAATCAAATGAAGTTTTTATTGCTTGCTCTAAGGCTATTACTATAGTTCTTTCTTGACTTAGTACTCAGATAGGGTACGCTTCCTCGAAGCTGCCGGTGCTGTAACGTTCGGTTCTTATTTTGATTAAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGGTGGACATTCTGCATTGCTTACTATGACTTTTATATGATTTGAATTGCTCTTTTTGTGTAGAGAATAATTTGTTTGTGTGCTTTGTAGTGAATCGGTTGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTATGGTGGCCGTACATGACGTTTATATGATAGGTAATGGCGTTTTACTGATTATTATTGTTATTTTGTAGGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGTATTAAAAAAATCGCTATGTTTTATCAATGTTTAAGTATTTTCATTTTCTTATCCGTTTTTTTTCTCTTATCATATGTTTGTTATTAGCTTATTGTTACGAAATCTATCGTAGTAGTAGAACGGCATCTGTTAAAAGCCTCTGTCTGGGCTAACATCATCATTTCAAAACTTTTCCTCTTTTGGTCGCTAGTCAGGGAGCTTTTATGGCCTTTAATCTTCATTTTAAGTACTGTTCTTATGAGATTTCTATGAAAAAACCAATTGCAAAGTGGCTGCTTGCAAGTTTCCTGCGTTCAAAAGATCCTATTCTGTACAAAAAGAAGTTAGATGTTCTTTTCTATAATGCCAGGGTTTATCGCACAAGTATTGTTTTTTCAATTGGAACGTACTGTTTATGATATTCGAGCAAAAAGTTTGTATGGTGTAACAACCCAAGTCTATCGCTAGTAGATATTATTCTCTTTAGCTTGTTACATATTGTTGTCGTTCAGCCTCAGGTTTTACAAGTGCGTCTAACTAGGGGAAGTTACCCAATACCACTTAATATTAGACATGATACGTGAATTCCCTCTTTCCATTACAATGTTTGGGATCTCAACAAATCCACCTACTACTTCCTAGGATACTTATTGGGATCCAGTAGATTCGACAAATATCCAGAGGCATTTCTTTTCCCTAACCGGTTGGCACCGCATAATCCTGCGAACTTTGGTAAAGGTATTCTATTTTTCCTTTTTTTTTTTTTTAAATAAATGAGGCGTCTCAAATTGCAAGAGACGCCCCTTTGCTTTGATCATGGCGTTCTGAGTGAAGGTCCACAACACTATCTCTGGCTAATAAATTCATGGAGTAAGGTTGTTTTGGCAATCCCAGCAAATCTCCACTTCAGTTGGCATACCTCCGGTGGTCTAGCTGTTAACTTAAATGATAGCGCATGTTGTTGAGGAAGATGTAACATACTCGAAATATACTACACATTGTGGGAAGCTAGTAGGGGAAGTGAGAATAGAGTGATAGTTGTGCGTTGCTTTGACCCATTGAGATGTGGAATCATTGTTAGTCGTGGGACGCGGAAAGGTGTGGTGTGATTGTTTTTATTTTTTAAAAATAACATTACTAGGCGAGAGGATTTCAAATCCCTTCGAACTTTTTATAAGGATAATGTCTAATTTATTATTCTCTCATCCAACCAATAAATTAAACTATTTTTATAAATCTAAGGTTTGAGATCTCATTCAATATCTCACTCCCTCTTGTGTTTGTTTCATTTGTTATTTTATTTTGGCCCTAGCGTGCTTCATGCTAGGCCAACCACCGACCACTTGTACTAAACCGATGTGTCCTAAATGCTGTCATCATAAAAATACCCATATTTATATAGCAATCCAAGCCCACACCATCTTGTCACCTTATCTGGTCCTTTTTAGCTGTGCGACGTATTGCGTCATAGGTCCGTCAAGCTTTCATGGCCTATTTAAAATGCCCTATCTAGCTCCCAGAGAATAGATATTGTTTCTATACCCTTATAAGGAATGCTTCGTTCCCATTTCCAACCAAGGTGAGATCTTAGTCTTGATATACCTTATTCCATAATATTGTTCCCATTTCCTATCCCACGATGGCTATCAATACAAACTTTCTCAATCCTAGAGTCTCATGTATTAGAAATCGATGATAAATTTTTTTTCTGTAAATCATGGGCTGACCATGTTTATGGCCTGTGAAGAACCATAATTTTTAAAATGACATGGTGTGGAAAGCTATGAACCACAGATACATTAGTTTGGATAGCATGTGATTCTAGATTTGCTTTTTAAAGATGATTCATATTTAAACGTGTTGGTATCAACATCTTTTAATTTTTCATTCAATTTCTGTGCCAAATTCCAGGACCCTTAAAGCGTGCTCCAGAAAATCCACTGTCTGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTTAGTATAGCTTGTCTTCTGCTTTAGGATGATAAACTTCTTCATGACTGGCGTAGATGAACAATTGTACACATGTTTTCATCACATTAAAAGTCGATAATTGATTCTTTTAACCGTTCATGATATGTTTCAGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGTAATTTTGCACTCATTCCCTTGCACGCATGTTATTCTTCAACCTATTTTCTGATCAGTTATTCATGCTTGAATTATTTATGCTTTATGAAAACCGAACACGGAAGTATTAAGCCAAATAGTTCTTGTACGGCCGCTCTCTCCATTTATAGAAAAACATTACAGTTTGTGGTCTCTACTGTCTTCTATCTCAACGATCGGGCCTGATGTCAAGGGCCTCTGGATTCATTACTGTGTTTGTGGGTTTAAAATCTTTTGGATCACATTCTCAATCCTATGAGTTTCCAAGTATTTTATGAGTTTTTGAAATATTTTGACTTGTGACTGTTAATATTGCCCTGGATTTTTCTCCACCTAATCCTTTTCTCCTTCACTACCTCTGAGTTTGCAACATCATATTGAATGTTAACCAACAACACCTTATGTAACCGCCCAAGCTCACCGCTAGCGGATATTGTCCTCTTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGTTGAGGTTTCCACACCTTTATAAAGATGGCTTCGTTCTCTCCTCCCCAATAAATGTGTAATCTCACACATTATTTGGCCAATATTTTGGCGTTTCTCTAAAATGCTCCTCCAATTCGTTTTTTTCCGGTAGAACAAATGTTGGGGTAGTAGGGGTTTGATCCTTGAACTTCAAAGGAACGAGTAGATGCCTTAACCATTGGGCTATGCTTATGGTTTGTAAAGATATCACATGCTTCGTTTTGTTTGCGTTCATCTGAGTCCCTGCACTGCCTAAAAATTGTTGTTTGCCAGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGACGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCCCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGTAAAAACTTTTATTTTCCCTTGAAGCGAGGCCTTTCGATCACCTTCTTGCTATCGATTCAGGATAATCTAGTTTACTAGATCTTTCGATATTGGACATATAATTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGTGCGTATCTTCTTCATGAACGCAATACTGCATGAATTGTGATATGTTCATAAACGTCTAACTTAATCATGCACTCAAATGCTGTTTAGGATTCTATAATTGACTTGGCTTGCTCTAAATGAATGTTAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAAACCGACCACAGGTTGCTACAGCTTCATGCTGCAAACGAAGCAGCATCGATGGAGCCCTCAAGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTGGAGGCAACCCAAAGGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAGTAACTAACAGCGCCCCAGCCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGACCAGCTCTGTGTCTGGTATGTCAGCAGACAATGTGTCTGAATGGGAAGTTAGTTGATTATGGAAAAACTTCCTTCCATCAGTCTAATCTTAACCGAACCTATCAATTTAAAATTTTGCCCGACTCGTTTTTTTAGGATGAGTAAATACACAGTGAAGTCTGTTTTTGCCCCATGTTTCAAAGTGATAGCTTGCCATCCACTTGCTGTGAATGCTGAACGTTCTCGACCGATGAAACATGCAGGAGCCACACCTCGATCGTAGTATCGAACAGGTCAGAGGCATCATCTCTCTTGTTTTACTTTTTTCTTCTCTGCTTAGCCAAGCCAAGCCAAACCAAACCAAACCATGGCTCTACACTGATCATATATCTTACTGCTTAGTTTTCCCATAGAGCTTTGCTGATTACCAAATTTTACTAACGATATCGATGCACTCGACAAAGGGTTCTCTTCGAATCGTTAAATGCCATGTGAAAAACTGGACTTGTTTGTGTACCTTTGGCTGAAGGGCAGTCAACTTAATGCATTACAGGAACCTTTAGATATACATTCTTTCTGTTCTGTTCAAGAAAAGTCCTTTCGGACTCGACTCGACCCCTCTTATGGATGATACTTATATCGTATGGGTCGGTAATATCTTATTAGCCATATCATCGTTGATGCTTAATCAGTTAAGCAAAATATCTCTGAACTTT

mRNA sequence

TATGTATCGATGCACATTTATTTATATAGTCGCTCAAAGTTTTCCCGAAATAACGAATTTCTGAAGACGGGATCTTCAATTCTGATTTTTTTCTTGGTACTTTTTTTCTCAGTTTCTCTCTTTGATTCTTTGATAGTGACGGCGAAATCAGTGAAACCACACAGGGAAGCTTAGCTTATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGTGAATCGGTTGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGACCCTTAAAGCGTGCTCCAGAAAATCCACTGTCTGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGAACGAGTAGATGCCTTAACCATTGGGCTATGCTTATGGTTTGTAAAGATATCACATGCTTCGTTTTGTTTGCGTTCATCTGAGTCCCTGCACTGCCTAAAAATTGTTGTTTGCCAGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGACGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCCCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAAACCGACCACAGGTTGCTACAGCTTCATGCTGCAAACGAAGCAGCATCGATGGAGCCCTCAAGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTGGAGGCAACCCAAAGGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAGTAACTAACAGCGCCCCAGCCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGACCAGCTCTGTGTCTGGTATGTCAGCAGACAATGTGTCTGAATGGGAAGTTAGTTGATTATGGAAAAACTTCCTTCCATCAGTCTAATCTTAACCGAACCTATCAATTTAAAATTTTGCCCGACTCGTTTTTTTAGGATGAGTAAATACACAGTGAAGTCTGTTTTTGCCCCATGTTTCAAAGTGATAGCTTGCCATCCACTTGCTGTGAATGCTGAACGTTCTCGACCGATGAAACATGCAGGAGCCACACCTCGATCGTAGTATCGAACAGGTCAGAGGCATCATCTCTCTTGTTTTACTTTTTTCTTCTCTGCTTAGCCAAGCCAAGCCAAACCAAACCAAACCATGGCTCTACACTGATCATATATCTTACTGCTTAGTTTTCCCATAGAGCTTTGCTGATTACCAAATTTTACTAACGATATCGATGCACTCGACAAAGGGTTCTCTTCGAATCGTTAAATGCCATGTGAAAAACTGGACTTGTTTGTGTACCTTTGGCTGAAGGGCAGTCAACTTAATGCATTACAGGAACCTTTAGATATACATTCTTTCTGTTCTGTTCAAGAAAAGTCCTTTCGGACTCGACTCGACCCCTCTTATGGATGATACTTATATCGTATGGGTCGGTAATATCTTATTAGCCATATCATCGTTGATGCTTAATCAGTTAAGCAAAATATCTCTGAACTTT

Coding sequence (CDS)

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGTGAATCGGTTGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGACCCTTAAAGCGTGCTCCAGAAAATCCACTGTCTGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGAACGAGTAGATGCCTTAACCATTGGGCTATGCTTATGGTTTGTAAAGATATCACATGCTTCGTTTTGTTTGCGTTCATCTGAGTCCCTGCACTGCCTAAAAATTGTTGTTTGCCAGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGACGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCCCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGAAGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAAACCGACCACAGGTTGCTACAGCTTCATGCTGCAAACGAAGCAGCATCGATGGAGCCCTCAAGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTGGAGGCAACCCAAAGGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAGTAACTAACAGCGCCCCAGCCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGA

Protein sequence

MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRSSESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAANEAASMEPSRSGMDSVLLSGQTISLEATQRLLNKDATIVIPNANANINVHAQTSTQEARNTVTNSAPAVFNAGNHAGSSASRAVS

Homology

[Close]

BLAST of Carg13179 vs. NCBI nr
Match: XP_022941619.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita moschata] >XP_022941620.1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita moschata] >XP_022941621.1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita moschata] >XP_022941622.1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita moschata])

HSP 1 Score: 656.8 bits (1693), Expect = 4.7e-185
Identity = 350/390 (89.74%), Postives = 350/390 (89.74%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120
           KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP
Sbjct: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRS 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP                          
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP-------------------------- 180

Query: 181 SESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240
                        EVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 181 -------------EVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240

Query: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL
Sbjct: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300

Query: 301 QLHAANEAASMEPSRSGMDSVLLSGQTISLEATQRLLNKDATIVIPNAXXXXXXXXXTST 360
           QLHAANEAASMEPSRSGMDSVLLSGQTIS EATQRLLNKDATIVIPNAXXXXXXXXXTST
Sbjct: 301 QLHAANEAASMEPSRSGMDSVLLSGQTISFEATQRLLNKDATIVIPNAXXXXXXXXXTST 351

Query: 361 QEARNTVTNSAPAVFNAGNHAGSSASRAVS 391
           QEARNTVTNSAPAVFNAGNHAGSSASRAVS
Sbjct: 361 QEARNTVTNSAPAVFNAGNHAGSSASRAVS 351

[Close]

BLAST of Carg13179 vs. NCBI nr
Match: XP_023518527.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita pepo subsp. pepo] >XP_023518533.1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita pepo subsp. pepo] >XP_023518541.1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita pepo subsp. pepo] >XP_023518549.1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 649.0 bits (1673), Expect = 9.9e-183
Identity = 344/390 (88.21%), Postives = 346/390 (88.72%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120
           KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRA 
Sbjct: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRS 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP                          
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP-------------------------- 180

Query: 181 SESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240
                        EVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 181 -------------EVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240

Query: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL
Sbjct: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300

Query: 301 QLHAANEAASMEPSRSGMDSVLLSGQTISLEATQRLLNKDATIVIPNAXXXXXXXXXTST 360
           QLHA NEAASMEPSRSGMDSVLLSGQTIS EATQ+LLNKDATIVIPNAXXXXXXXX TST
Sbjct: 301 QLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNKDATIVIPNAXXXXXXXXQTST 351

Query: 361 QEARNTVTNSAPAVFNAGNHAGSSASRAVS 391
           QEARNT+TNSAP VFNAGNHAGSSASRAVS
Sbjct: 361 QEARNTITNSAPGVFNAGNHAGSSASRAVS 351

[Close]

BLAST of Carg13179 vs. NCBI nr
Match: XP_022981667.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita maxima] >XP_022981668.1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita maxima] >XP_022981669.1 protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita maxima])

HSP 1 Score: 644.8 bits (1662), Expect = 1.9e-181
Identity = 343/390 (87.95%), Postives = 346/390 (88.72%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120
           KQVWNWFQNRRYAIRAKTTKVPGKLA SPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP
Sbjct: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAVSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRS 180
           +NPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP                          
Sbjct: 121 DNPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP-------------------------- 180

Query: 181 SESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240
                        EVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 181 -------------EVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240

Query: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ EEIVQLRKICRRPETDHRLL
Sbjct: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQCEEIVQLRKICRRPETDHRLL 300

Query: 301 QLHAANEAASMEPSRSGMDSVLLSGQTISLEATQRLLNKDATIVIPNAXXXXXXXXXTST 360
           QLHA NEAASMEPSR+GMDSVLLSGQTIS EATQ+LLNKDATIVIPNAXXXXXXXXXTST
Sbjct: 301 QLHAVNEAASMEPSRTGMDSVLLSGQTISFEATQKLLNKDATIVIPNAXXXXXXXXXTST 351

Query: 361 QEARNTVTNSAPAVFNAGNHAGSSASRAVS 391
           QEARNTVTNSAPAVFN GNHAGSSASRAVS
Sbjct: 361 QEARNTVTNSAPAVFNVGNHAGSSASRAVS 351

[Close]

BLAST of Carg13179 vs. NCBI nr
Match: XP_008456010.1 (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo])

HSP 1 Score: 568.2 bits (1463), Expect = 2.2e-158
Identity = 290/378 (76.72%), Postives = 308/378 (81.48%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEME ILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120
           KQVWNWFQNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAPT VG  K AP
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRS 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP                          
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP-------------------------- 180

Query: 181 SESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240
                        EVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 181 -------------EVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 240

Query: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 300

Query: 301 QLHAANEAASMEPSRSGMDSVLLSGQTISLEATQRLLNKDATIVIPNAXXXXXXXXXTST 360
           QLHA NEAAS+EPS+SGMDSVLLSGQ I+ E  Q  L+KDA +VIPNA         TST
Sbjct: 301 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTST 339

Query: 361 QEARNTVTNSAPAVFNAG 379
           QEARNT TN+AP  F++G
Sbjct: 361 QEARNTETNTAPITFSSG 339

[Close]

BLAST of Carg13179 vs. NCBI nr
Match: XP_022142790.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Momordica charantia])

HSP 1 Score: 562.8 bits (1449), Expect = 9.3e-157
Identity = 290/385 (75.32%), Postives = 309/385 (80.26%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEMEAILQGHNNTMP+REVLV+LA KFSES+ERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTAAEVAEMEAILQGHNNTMPAREVLVALAEKFSESIERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120
           KQVWNWFQNRRYAIRAK+TK PGKLA SPIVQ+ESTP RNVPQ+IVVPAP  VG +K AP
Sbjct: 61  KQVWNWFQNRRYAIRAKSTKAPGKLAVSPIVQIESTPVRNVPQSIVVPAPAPVGSVKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRS 180
           +NPLSEFEAKS RDGAWYDVATFLSH+SVESGDP                          
Sbjct: 121 DNPLSEFEAKSARDGAWYDVATFLSHKSVESGDP-------------------------- 180

Query: 181 SESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240
                        EVLVRFAGFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 181 -------------EVLVRFAGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 240

Query: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 300

Query: 301 QLHAANEAASMEPSRSGMDSVLLSGQTISLEATQRLLNKDATIVIPNAXXXXXXXXXTST 360
           QLHA NEAASMEP +SGMDSVLLSG  ++ E TQ+ L KDAT+V PNA         T T
Sbjct: 301 QLHAVNEAASMEPPKSGMDSVLLSGPRLNFEGTQKPLGKDATMVAPNANLNVNVQAQTIT 346

Query: 361 QEARNTVTNSAPAVFNAGNHAGSSA 386
           QE RN  T+S P  FN+GN AGSSA
Sbjct: 361 QEVRNIETSSTPISFNSGNPAGSSA 346

[Close]

BLAST of Carg13179 vs. TAIR10
Match: AT3G18380.2 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding)

HSP 1 Score: 348.6 bits (893), Expect = 5.0e-96
Identity = 196/378 (51.85%), Postives = 238/378 (62.96%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF  PEV EMEAIL  HN  MP R +L +LA KFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVE-------STPPRNVPQTI-------- 120
           KQ+WNWFQNRRYA+RA+  K PGKL  S + +++          P +VP+T         
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 VVPAPT---LVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTI 180
           + PAP+   + G ++   +N   EFEAKS RDGAWYDV  FL+HR++E GDP        
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDP-------- 180

Query: 181 GLCLWFVKISHASFCLRSSESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLP 240
                                          EV VRFAGF  +EDEW+NV++++R RSLP
Sbjct: 181 -------------------------------EVQVRFAGFEVEEDEWINVKKHVRQRSLP 240

Query: 241 CESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSE- 300
           CE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRRHDVRGCRCRFLVRY HDQSE 
Sbjct: 241 CEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEQ 300

Query: 301 EIVQLRKICRRPETDHRLLQLH-AANEAASMEPSR------SGMDSVLLSGQTISLEATQ 349
           EIV LRKICRRPETD+RL QLH A N+ A+    +      +    + L G T+ + A +
Sbjct: 301 EIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPALDAAAKTPLSLPGATVPIVAPE 339

[Close]

BLAST of Carg13179 vs. TAIR10
Match: AT1G15215.2 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1))

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-40
Identity = 105/288 (36.46%), Postives = 149/288 (51.74%), Query Frame = 0


Query: 14  FTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNR-RY 73
           FT  E+ +ME + +   +    ++   ++A  FS SV R GK ++  KQV  WFQ + ++
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73

Query: 74  AIRAKTTKVPGKLAGSPIVQVE-----STPPRNVPQTIVVPAPTLVGPLK-RAPENPLSE 133
             + K+  +P     SP +Q+      S+   N      V   T V   K +A +     
Sbjct: 74  QSQPKSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLA 133

Query: 134 FEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRSSESLHC 193
           FEAKS RD AWYDV++FL++R + +G+                                 
Sbjct: 134 FEAKSARDYAWYDVSSFLTYRVLRTGE--------------------------------- 193

Query: 194 LKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQ 253
                  EV VRF+GF +  DEWVNV+ ++R RS+P E SEC  V  GDL+LCFQE ++Q
Sbjct: 194 ------LEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQ 253

Query: 254 ALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPE 295
           ALY D HVL+ +R  HD   C C FLVRY+ D +EE + L +ICRRPE
Sbjct: 254 ALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERICRRPE 257

[Close]

BLAST of Carg13179 vs. Swiss-Prot
Match: sp|Q8RWJ7|SHH2_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE=2 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 3.7e-96
Identity = 196/377 (51.99%), Postives = 238/377 (63.13%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF  PEV EMEAIL  HN  MP R +L +LA KFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVE-------STPPRNVPQTI-------- 120
           KQ+WNWFQNRRYA+RA+  K PGKL  S + +++          P +VP+T         
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 VVPAPT---LVGPLKRAPENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTI 180
           + PAP+   + G ++   +N   EFEAKS RDGAWYDV  FL+HR++E GDP        
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDP-------- 180

Query: 181 GLCLWFVKISHASFCLRSSESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLP 240
                                          EV VRFAGF  +EDEW+NV++++R RSLP
Sbjct: 181 -------------------------------EVQVRFAGFEVEEDEWINVKKHVRQRSLP 240

Query: 241 CESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEE 300
           CE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRRHDVRGCRCRFLVRY HDQSEE
Sbjct: 241 CEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVRYSHDQSEE 300

Query: 301 IVQLRKICRRPETDHRLLQLH-AANEAASMEPSR------SGMDSVLLSGQTISLEATQ- 349
           IV LRKICRRPETD+RL QLH A N+ A+    +      +    + L G T+ + A + 
Sbjct: 301 IVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPALDAAAKTPLSLPGATVPIVAPES 338

[Close]

BLAST of Carg13179 vs. Swiss-Prot
Match: sp|Q9XI47|SHH1_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 4.1e-39
Identity = 105/288 (36.46%), Postives = 149/288 (51.74%), Query Frame = 0


Query: 14  FTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNR-RY 73
           FT  E+ +ME + +   +    ++   ++A  FS SV R GK ++  KQV  WFQ + ++
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73

Query: 74  AIRAKTTKVPGKLAGSPIVQVE-----STPPRNVPQTIVVPAPTLVGPLK-RAPENPLSE 133
             + K+  +P     SP +Q+      S+   N      V   T V   K +A +     
Sbjct: 74  QSQPKSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLA 133

Query: 134 FEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRSSESLHC 193
           FEAKS RD AWYDV++FL++R + +G+                                 
Sbjct: 134 FEAKSARDYAWYDVSSFLTYRVLRTGE--------------------------------- 193

Query: 194 LKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQ 253
                  EV VRF+GF +  DEWVNV+ ++R RS+P E SEC  V  GDL+LCFQE ++Q
Sbjct: 194 ------LEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQ 253

Query: 254 ALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPE 295
           ALY D HVL+ +R  HD   C C FLVRY+ D +EE + L +ICRRPE
Sbjct: 254 ALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLGLERICRRPE 257

[Close]

BLAST of Carg13179 vs. TrEMBL
Match: tr|A0A1S3C274|A0A1S3C274_CUCME (protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496064 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 1.5e-158
Identity = 290/378 (76.72%), Postives = 308/378 (81.48%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEME ILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120
           KQVWNWFQNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAPT VG  K AP
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRS 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP                          
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP-------------------------- 180

Query: 181 SESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240
                        EVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 181 -------------EVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 240

Query: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 300

Query: 301 QLHAANEAASMEPSRSGMDSVLLSGQTISLEATQRLLNKDATIVIPNAXXXXXXXXXTST 360
           QLHA NEAAS+EPS+SGMDSVLLSGQ I+ E  Q  L+KDA +VIPNA         TST
Sbjct: 301 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTST 339

Query: 361 QEARNTVTNSAPAVFNAG 379
           QEARNT TN+AP  F++G
Sbjct: 361 QEARNTETNTAPITFSSG 339

[Close]

BLAST of Carg13179 vs. TrEMBL
Match: tr|A0A1S3C2X6|A0A1S3C2X6_CUCME (protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496064 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 2.2e-146
Identity = 270/357 (75.63%), Postives = 288/357 (80.67%), Query Frame = 0


Query: 22  MEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKV 81
           ME ILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K 
Sbjct: 1   METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAPENPLSEFEAKSGRDGAWYDVA 141
           PGKLA SP+VQ+ESTP RNVPQT+VVPAPT VG  K APENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRSSESLHCLKIVVCQEVLVRFAG 201
           TFLSHRSVESGDP                                       EVLVRF+G
Sbjct: 121 TFLSHRSVESGDP---------------------------------------EVLVRFSG 180

Query: 202 FGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 261
           FGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR
Sbjct: 181 FGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240

Query: 262 HDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAANEAASMEPSRSGMDSV 321
           HDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL QLHA NEAAS+EPS+SGMDSV
Sbjct: 241 HDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSV 300

Query: 322 LLSGQTISLEATQRLLNKDATIVIPNAXXXXXXXXXTSTQEARNTVTNSAPAVFNAG 379
           LLSGQ I+ E  Q  L+KDA +VIPNA         TSTQEARNT TN+AP  F++G
Sbjct: 301 LLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTSTQEARNTETNTAPITFSSG 318

[Close]

BLAST of Carg13179 vs. TrEMBL
Match: tr|A0A0A0LC67|A0A0A0LC67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G236580 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.2e-144
Identity = 282/385 (73.25%), Postives = 299/385 (77.66%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEMEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAP 120
           K      QNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K AP
Sbjct: 61  K------QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCLRS 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP                          
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDP-------------------------- 180

Query: 181 SESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 240
                        EVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 181 -------------EVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 240

Query: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 300
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 241 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 300

Query: 301 QLHAANEAASMEPSRSGMDSVLLSGQTISLEATQRLLNKDATIVIPNAXXXXXXXXXTST 360
           QLHA NEAAS+EPS+SGMDSVLLSGQ I+ E +Q  L+KDA +VIPNA    XXXXX   
Sbjct: 301 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSKDAALVIPNANPHIXXXXXXXX 340

Query: 361 QEARNTVTNSAPAVFNAGNHAGSSA 386
                         FN+ N AGSSA
Sbjct: 361 XXXXXXXXXXXXTTFNSANLAGSSA 340

[Close]

BLAST of Carg13179 vs. TrEMBL
Match: tr|A0A2P4HR62|A0A2P4HR62_QUESU (Isoform 3 of protein sawadee homeodomain like 2 OS=Quercus suber OX=58331 GN=CFP56_58683 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.0e-120
Identity = 235/390 (60.26%), Postives = 273/390 (70.00%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT  EVAEMEAILQ HNNTMPSR+VLVSLA KFSES +RKGKI VQM
Sbjct: 1   MGRPPSNGGPAFRFTQNEVAEMEAILQQHNNTMPSRDVLVSLADKFSESPDRKGKITVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIV--VPAPTLVGPLKR 120
           KQVWNWFQNRRYAIRAK +K PGKL  SP+ + +STP RNVPQ+I   +PAP++    + 
Sbjct: 61  KQVWNWFQNRRYAIRAKLSKAPGKLNVSPMHRDDSTPVRNVPQSIAAPIPAPSVPSAGRG 120

Query: 121 APENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCL 180
           APEN + EFEAKSGRDGAWYDV TFLSHR +E+GDP                        
Sbjct: 121 APENSVMEFEAKSGRDGAWYDVTTFLSHRYLETGDP------------------------ 180

Query: 181 RSSESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLIL 240
                          EVLVRFAGFG +EDEW+N+R+++RPRSLPCESSECVAVLPGDLIL
Sbjct: 181 ---------------EVLVRFAGFGPEEDEWINIRKHVRPRSLPCESSECVAVLPGDLIL 240

Query: 241 CFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHR 300
           CFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVRY HDQSEEIV LRK+CRRPE+DHR
Sbjct: 241 CFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYAHDQSEEIVPLRKVCRRPESDHR 300

Query: 301 LLQLHAANEAASMEPSRSGMDSVLLSGQTIS--LEATQRLLNKDATIVIPNAXXXXXXXX 360
           L QLHA NEAAS++  ++ +D   +SG  ++   E  Q+    DA +V            
Sbjct: 301 LQQLHAVNEAASIDQQKTSLDPSGVSGLRVATPAETLQQQRYADAMLVSTGPALHANVSV 351

Query: 361 XTST--QEARNTVTNSAPAVFNAGNHAGSS 385
            T T   E++   T++     NA    G++
Sbjct: 361 ATHTVIPESKQAETSNTNIAGNANAPPGAA 351

[Close]

BLAST of Carg13179 vs. TrEMBL
Match: tr|A0A2I4H1W3|A0A2I4H1W3_9ROSI (protein SAWADEE HOMEODOMAIN HOMOLOG 2-like OS=Juglans regia OX=51240 GN=LOC109012784 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.3e-118
Identity = 229/351 (65.24%), Postives = 258/351 (73.50%), Query Frame = 0


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT  EVAEM+ ILQ HNNTMPSR+VLVSLA KFSES ERKGKI VQM
Sbjct: 1   MGRPPSNGGPAFRFTQNEVAEMDVILQQHNNTMPSRDVLVSLAEKFSESAERKGKITVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVP--APTLVGPLKR 120
           KQVWNWFQNRRYAIRAK +K PGKL  SP+ + +STP RNV Q+I  P  AP++    K 
Sbjct: 61  KQVWNWFQNRRYAIRAKLSKAPGKLNVSPMPRDDSTPVRNVSQSIPAPIRAPSVPSAGKG 120

Query: 121 APENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPERVDALTIGLCLWFVKISHASFCL 180
           APEN   EFEAKSGRDGAWYDV++FLSHR +E+GDP                        
Sbjct: 121 APENSPMEFEAKSGRDGAWYDVSSFLSHRYLETGDP------------------------ 180

Query: 181 RSSESLHCLKIVVCQEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLIL 240
                          EVLVRF+GFG +EDEWVNVR+++RPRSLPCESSECVAVLPGDLIL
Sbjct: 181 ---------------EVLVRFSGFGPEEDEWVNVRKHVRPRSLPCESSECVAVLPGDLIL 240

Query: 241 CFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHR 300
           CFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVRYDHDQSEEIV LRK+CRRPETD+R
Sbjct: 241 CFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYR 300

Query: 301 LLQLHAANE-AASMEPSRSGMD--SVLLSGQTISLEATQRLLNKDATIVIP 347
           L QLHA N+ AAS+E  +  MD  +V +   + S E  Q+    +A +V P
Sbjct: 301 LHQLHAVNDAAASIEQEKISMDPSAVTVPRSSTSAETKQKQRYDNAAVVAP 312

The following BLAST results are available for this feature:

BLAST of Carg13179 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941619.1	4.7e-185	89.74	protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita moschata] >XP_022941620.1 ...	[more]
XP_023518527.1	9.9e-183	88.21	protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022981667.1	1.9e-181	87.95	protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Cucurbita maxima] >XP_022981668.1 pr...	[more]
XP_008456010.1	2.2e-158	76.72	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo]	[more]
XP_022142790.1	9.3e-157	75.32	protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Momordica charantia]	[more]

BLAST of Carg13179 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18380.2	5.0e-96	51.85	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT1G15215.2	2.3e-40	36.46	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]

BLAST of Carg13179 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RWJ7\|SHH2_ARATH	3.7e-96	51.99	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE...	[more]
sp\|Q9XI47\|SHH1_ARATH	4.1e-39	36.46	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE...	[more]

BLAST of Carg13179 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C274\|A0A1S3C274_CUCME	1.5e-158	76.72	protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A1S3C2X6\|A0A1S3C2X6_CUCME	2.2e-146	75.63	protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0LC67\|A0A0A0LC67_CUCSA	1.2e-144	73.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G236580 PE=4 SV=1	[more]
tr\|A0A2P4HR62\|A0A2P4HR62_QUESU	6.0e-120	60.26	Isoform 3 of protein sawadee homeodomain like 2 OS=Quercus suber OX=58331 GN=CFP...	[more]
tr\|A0A2I4H1W3\|A0A2I4H1W3_9ROSI	3.3e-118	65.24	protein SAWADEE HOMEODOMAIN HOMOLOG 2-like OS=Juglans regia OX=51240 GN=LOC10901...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003682	chromatin binding
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR039276	SHH1/2
IPR032001	SAWADEE_dom
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0000785	chromatin
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg13179-RA	Carg13179-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 7..81 e-value: 0.0024 score: 21.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 13..74 e-value: 1.4E-4 score: 21.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 13..77 score: 9.556
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 13..75 e-value: 3.58742E-4 score: 37.2229
None	No IPR available	GENE3D	G3DSA:2.40.50.40		coord: 125..157 e-value: 2.6E-9 score: 39.3 coord: 180..222 e-value: 1.0E-12 score: 50.1
None	No IPR available	GENE3D	G3DSA:2.30.30.140		coord: 223..295 e-value: 4.2E-37 score: 127.8
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 9..83 e-value: 5.5E-6 score: 27.8
None	No IPR available	PANTHER	PTHR33827:SF3	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 193..368
None	No IPR available	PANTHER	PTHR33827:SF3	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 1..155
IPR032001	SAWADEE domain	PFAM	PF16719	SAWADEE	coord: 126..290 e-value: 9.5E-37 score: 126.0
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	FAMILY NOT NAMED	coord: 193..368
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	FAMILY NOT NAMED	coord: 1..155
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 4..75

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg13179	Cla004283	Watermelon (97103) v1	carwmB0048
Carg13179	Csa3G236580	Cucumber (Chinese Long) v2	carcuB0043
Carg13179	MELO3C019390	Melon (DHL92) v3.5.1	carmeB0041
Carg13179	ClCG05G009190	Watermelon (Charleston Gray)	carwcgB0045
Carg13179	CSPI03G19540	Wild cucumber (PI 183967)	carcpiB0047
Carg13179	Cucsa.032420	Cucumber (Gy14) v1	carcgyB0048
Carg13179	CmaCh16G004110	Cucurbita maxima (Rimu)	carcmaB0053
Carg13179	CmoCh16G004430	Cucurbita moschata (Rifu)	carcmoB0055
Carg13179	CmoCh04G005930	Cucurbita moschata (Rifu)	carcmoB0058
Carg13179	Lsi05G001280	Bottle gourd (USVL1VR-Ls)	carlsiB039
Carg13179	Cp4.1LG01g01690	Cucurbita pepo (Zucchini)	carcpeB0061
Carg13179	Cp4.1LG14g03640	Cucurbita pepo (Zucchini)	carcpeB0059
Carg13179	CsGy3G019470	Cucumber (Gy14) v2	carcgybB0043
Carg13179	MELO3C019390.2	Melon (DHL92) v3.6.1	carmedB0042
Carg13179	CsaV3_3G019600	Cucumber (Chinese Long) v3	carcucB0048
Carg13179	Cla97C05G091510	Watermelon (97103) v2	carwmbB0042
Carg13179	Bhi01G001145	Wax gourd	carwgoB0050

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg13179	Carg11342	Silver-seed gourd	carcarB051

The following block(s) are covering this gene:


Gene	Organism	Block
Carg13179	Cucurbita maxima (Rimu)	carcmaB0055