Cp4.1LG13g07080 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAAACCACGGCGATGACGATGGCGATGGCGATGACGATGGTGATACTAGTGAGTTTATCGGGAGCATTGGCGGAAATGGATGTGTGCGGTGTGAGCCAGGACGGTCTCACGGCGTGCAAGCCGTGGGTGACGAAGCCGTGCCCTACCGAGCTGCCACCGGCTGCTTGTTGCGACGGTCTCTCCAAGGCTGACTTCGGTTGCTTTTGCAACTATAAGCACTCGCTCGTGCTGCCCTCGCTCGGCATTGACCCCGATCTTGCCCTTGCCTTGCCAGCCAAGTGCAGCCTCCCCAACAGCCCCTCTTGCTAA ATGGCTCAAACCACGGCGATGACGATGGCGATGGCGATGACGATGGTGATACTAGTGAGTTTATCGGGAGCATTGGCGGAAATGGATGTGTGCGGTGTGAGCCAGGACGGTCTCACGGCGTGCAAGCCGTGGGTGACGAAGCCGTGCCCTACCGAGCTGCCACCGGCTGCTTGTTGCGACGGTCTCTCCAAGGCTGACTTCGGTTGCTTTTGCAACTATAAGCACTCGCTCGTGCTGCCCTCGCTCGGCATTGACCCCGATCTTGCCCTTGCCTTGCCAGCCAAGTGCAGCCTCCCCAACAGCCCCTCTTGCTAA ATGGCTCAAACCACGGCGATGACGATGGCGATGGCGATGACGATGGTGATACTAGTGAGTTTATCGGGAGCATTGGCGGAAATGGATGTGTGCGGTGTGAGCCAGGACGGTCTCACGGCGTGCAAGCCGTGGGTGACGAAGCCGTGCCCTACCGAGCTGCCACCGGCTGCTTGTTGCGACGGTCTCTCCAAGGCTGACTTCGGTTGCTTTTGCAACTATAAGCACTCGCTCGTGCTGCCCTCGCTCGGCATTGACCCCGATCTTGCCCTTGCCTTGCCAGCCAAGTGCAGCCTCCCCAACAGCCCCTCTTGCTAA MAQTTAMTMAMAMTMVILVSLSGALAEMDVCGVSQDGLTACKPWVTKPCPTELPPAACCDGLSKADFGCFCNYKHSLVLPSLGIDPDLALALPAKCSLPNSPSC
BLAST of Cp4.1LG13g07080 vs. Swiss-Prot
Match: DIRL1_ARATH (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana GN=DIR1 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.4e-17 Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. TrEMBL
Match: A0A0A0K4Q7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G372360 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.8e-31 Identity = 62/92 (67.39%), Postives = 76/92 (82.61%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. TrEMBL
Match: A0A022S1B0_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a022331mg PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 6.0e-21 Identity = 49/77 (63.64%), Postives = 59/77 (76.62%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. TrEMBL
Match: A0A022S1I9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a025642mg PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.5e-19 Identity = 55/99 (55.56%), Postives = 69/99 (69.70%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. TrEMBL
Match: A0A164Z5V2_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018625 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 9.6e-19 Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. TrEMBL
Match: F5BR62_TOBAC (Defective in induced resistance 1 protein OS=Nicotiana tabacum GN=DIR1 PE=2 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 9.6e-19 Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. TAIR10
Match: AT5G48485.1 (AT5G48485.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 89.0 bits (219), Expect = 1.9e-18 Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. TAIR10
Match: AT5G48490.1 (AT5G48490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 76.6 bits (187), Expect = 9.8e-15 Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. NCBI nr
Match: gi|700189457|gb|KGN44690.1| (hypothetical protein Csa_7G372360 [Cucumis sativus]) HSP 1 Score: 142.1 bits (357), Expect = 5.4e-31 Identity = 62/92 (67.39%), Postives = 76/92 (82.61%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. NCBI nr
Match: gi|778727191|ref|XP_004150334.2| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 9.2e-31 Identity = 66/102 (64.71%), Postives = 80/102 (78.43%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. NCBI nr
Match: gi|659092795|ref|XP_008447223.1| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo]) HSP 1 Score: 136.7 bits (343), Expect = 2.3e-29 Identity = 62/101 (61.39%), Postives = 80/101 (79.21%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. NCBI nr
Match: gi|848851631|ref|XP_012836760.1| (PREDICTED: putative lipid-transfer protein DIR1 [Erythranthe guttata]) HSP 1 Score: 109.8 bits (273), Expect = 3.0e-21 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 1
BLAST of Cp4.1LG13g07080 vs. NCBI nr
Match: gi|604347964|gb|EYU46119.1| (hypothetical protein MIMGU_mgv1a022331mg, partial [Erythranthe guttata]) HSP 1 Score: 108.2 bits (269), Expect = 8.6e-21 Identity = 49/77 (63.64%), Postives = 59/77 (76.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |