Cp4.1LG13g06690 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g06690
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	conserved peptide upstream open reading frame 53
Location	Cp4.1LG13 : 4517828 .. 4520139 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGGTCAAAATGAAATGGGTGTGGTTTGATTTGCTTAAATTTTGGTTATTTTTATATACCCAATTCTCGCCTTCTTCCTCTGTTGTCTGTGAGTGGAGATTTAGGGAAATTTAGGGTTTGAAAGGCTTCTTCTGTCTGTTTCTCTTGCTCTGCAACTTGAGCGCCTTTCTGAGCTTCTTTTCGCTGTTTTCCTGCACACGCCGTAGGCATACATTGATAAGTTTAACGCTTCCTTTGTCACGTTTTAAGCAAAGCCCAACCATAGCCATTGATTTCTCATCCTATCCCTTCAATCCTTCTTCCCTTTTCTGTACTCCCTTCCCTTTTATTTATTATCTTCGTTTTGCTTATTCTTCCTCTGTTTCAAAGGCAGACGGAGGGAGGGCTTCTTTTTTCCTGTTTTGTTTTCTGATTTTCTCTGAGGTTTGAGGAAGAGGAAGGCAGAGTTCTAGGAGTTGAGGAGCTGCAGATTTATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGTTTCAAGCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGTTTGTGGGGGGTTTTTTCTTCTCTTTTTACTGTCTCGATCTGTTTTGTTTTCTGGGTTTTAATCTGATTTTTGTTTGTGGGTCTTTTGCAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGATTCTCCTTCATTCTCTTGCTCTTCAGAAGAGGGGGTTTCACATAAAACTAACCCTTGATTCGATTTTGGTTCATTCTGTTCGCCTCCTTTTCCCCTTAAGTTTTGGTCTGTTCGAGTTCGAGTTCTATTTTTCCTGAGTTGTAGAGTTTTTTCCTTTTCTTTTCCTCAAAACAATGCCAGAGCCTCGAGTTTTACAGCTAACGAATCAAAAAAGTTTTGGAAAAAAATCCAAATCGAGACCCGAAGAACCTAAAATGACTCGGAAAATCCGTGTCATCTGCAACGATCCAGACGCAACCGATTCGTCTTCGAGCGAAGATGAGGGTGAAATCGGAACGAAATCTCTCAAATTAAAACGAATCGTTCGAGAAATCCATCTACCCTTGTTCCCTTTTCAGTCCTCTAAATCAATGGACGTAACCACTAGTACTCAGAGTTCTTCACAGGACAGCAACAATGGCAGCAAAAACCCAGAGCTGAAGAGGAAGAGGGGTTTAGGCAGTAAAACCATGCCTAAAACCCTCTCCACCCGAAGAAGCGCCTCCCAATACAGAGGAGTTCGTCAAAGAAAGTGGGGCAAATGGGCCGCCGAAATCCGAGACCCTTCCAAGGGAGCTCGCATTTGGCTCGGGACTTACAACACTGCTGAAGAAGCCTCTCAGGCCTACGAATCAAAACGCCTCGAGTTCGAAAACGCCATGGCGGCCGCCCCCAAAGCCAACGTCATCATCTCTTCCTCGTCTTCTTCCTCCGATGAGAACGAGGAAGAATCCGGCACCGCGATCTCTCAAACATCCCCACCCGCCATTGTTGAAATGGAAACCTCTTCCTCTGTTTTGATAAAAGAGGAGGAAGTGATCGACACCAGTTTGATGAACGAACTCCAAATCCCCAATTTGGGATTCGTGGACGAGGATTTCGAAATCAATTTGGGGCTTCCAGAACTGGACCCCTTTTTCATGAACGACATTGGACTATTGTTTGACGACTTCTCCGGCATGGACGACCTTCAGATTTACGGGTTCGATGAGGATGAACCCAGTTGCTTGCCGGATTGCGATTTCAACGATTTTGGAAACGATGAAATATCCTGTTGGGTTGATGAAGCTTTGAATGTTCCTTGCTCATGATAAGAAAGTTTTGCAGATTAGGGTTGAAGAAAACAATGTTTATGTTTTGTTTTGCATAGTGTTTTGACTATGATGTTTATGATGAGGTTTAGTTTTTGTTGGGGTTCTGGTAAAACACTGATTTTCTCGGGAAAATGTTAAAATTTTGCGGGAAAGTTAATGAGTTTTGGTTTATGATGGAGAGTAGATATCCATATGTTCTGGGTTTTCCTGCGCTTTGAGAGCCGTCCAGGGGATGCGGATTTCTTAGTTATTTATAATTCTATTGTTCTTTGTTCTTTGTTCTTTGTTCTTTGTTCTTGTCACGCCTCATTTTGTCTGTTGGATTCATCTGCGACTGCATTTCTTCATCAAACATATTCCAATCAATCTCTACAAAATTTCAACATTGTTTGCATATTGATTTTCA

mRNA sequence

TCTGGTCAAAATGAAATGGGTGTGGTTTGATTTGCTTAAATTTTGGTTATTTTTATATACCCAATTCTCGCCTTCTTCCTCTGTTGTCTGTGAGTGGAGATTTAGGGAAATTTAGGGTTTGAAAGGCTTCTTCTGTCTGTTTCTCTTGCTCTGCAACTTGAGCGCCTTTCTGAGCTTCTTTTCGCTGTTTTCCTGCACACGCCGTAGGCATACATTGATAAGTTTAACGCTTCCTTTGTCACGTTTTAAGCAAAGCCCAACCATAGCCATTGATTTCTCATCCTATCCCTTCAATCCTTCTTCCCTTTTCTGTACTCCCTTCCCTTTTATTTATTATCTTCGTTTTGCTTATTCTTCCTCTGTTTCAAAGGCAGACGGAGGGAGGGCTTCTTTTTTCCTGTTTTGTTTTCTGATTTTCTCTGAGGTTTGAGGAAGAGGAAGGCAGAGTTCTAGGAGTTGAGGAGCTGCAGATTTATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGTTTCAAGCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGATTCTCCTTCATTCTCTTGCTCTTCAGAAGAGGGGGTTTCACATAAAACTAACCCTTGATTCGATTTTGGTTCATTCTGTTCGCCTCCTTTTCCCCTTAAGTTTTGGTCTGTTCGAGTTCGAGTTCTATTTTTCCTGAGTTGTAGAGTTTTTTCCTTTTCTTTTCCTCAAAACAATGCCAGAGCCTCGAGTTTTACAGCTAACGAATCAAAAAAGTTTTGGAAAAAAATCCAAATCGAGACCCGAAGAACCTAAAATGACTCGGAAAATCCGTGTCATCTGCAACGATCCAGACGCAACCGATTCGTCTTCGAGCGAAGATGAGGGTGAAATCGGAACGAAATCTCTCAAATTAAAACGAATCGTTCGAGAAATCCATCTACCCTTGTTCCCTTTTCAGTCCTCTAAATCAATGGACGTAACCACTAGTACTCAGAGTTCTTCACAGGACAGCAACAATGGCAGCAAAAACCCAGAGCTGAAGAGGAAGAGGGGTTTAGGCAGTAAAACCATGCCTAAAACCCTCTCCACCCGAAGAAGCGCCTCCCAATACAGAGGAGTTCGTCAAAGAAAGTGGGGCAAATGGGCCGCCGAAATCCGAGACCCTTCCAAGGGAGCTCGCATTTGGCTCGGGACTTACAACACTGCTGAAGAAGCCTCTCAGGCCTACGAATCAAAACGCCTCGAGTTCGAAAACGCCATGGCGGCCGCCCCCAAAGCCAACGTCATCATCTCTTCCTCGTCTTCTTCCTCCGATGAGAACGAGGAAGAATCCGGCACCGCGATCTCTCAAACATCCCCACCCGCCATTGTTGAAATGGAAACCTCTTCCTCTGTTTTGATAAAAGAGGAGGAAGTGATCGACACCAGTTTGATGAACGAACTCCAAATCCCCAATTTGGGATTCGTGGACGAGGATTTCGAAATCAATTTGGGGCTTCCAGAACTGGACCCCTTTTTCATGAACGACATTGGACTATTGTTTGACGACTTCTCCGGCATGGACGACCTTCAGATTTACGGGTTCGATGAGGATGAACCCAGTTGCTTGCCGGATTGCGATTTCAACGATTTTGGAAACGATGAAATATCCTGTTGGGTTGATGAAGCTTTGAATGTTCCTTGCTCATGATAAGAAAGTTTTGCAGATTAGGGTTGAAGAAAACAATGTTTATGTTTTGTTTTGCATAGTGTTTTGACTATGATGTTTATGATGAGGTTTAGTTTTTGTTGGGGTTCTGGTAAAACACTGATTTTCTCGGGAAAATGTTAAAATTTTGCGGGAAAGTTAATGAGTTTTGGTTTATGATGGAGAGTAGATATCCATATGTTCTGGGTTTTCCTGCGCTTTGAGAGCCGTCCAGGGGATGCGGATTTCTTAGTTATTTATAATTCTATTGTTCTTTGTTCTTTGTTCTTTGTTCTTTGTTCTTGTCACGCCTCATTTTGTCTGTTGGATTCATCTGCGACTGCATTTCTTCATCAAACATATTCCAATCAATCTCTACAAAATTTCAACATTGTTTGCATATTGATTTTCA

Coding sequence (CDS)

ATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGTTTCAAGCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGATTCTCCTTCATTCTCTTGCTCTTCAGAAGAGGGGGTTTCACATAA

Protein sequence

MSAGFDLAVIGALLQLCFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT

Homology

[Close]

BLAST of Cp4.1LG13g06690 vs. TrEMBL
Match: A0A0A0KAV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039145 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-25
Identity = 69/83 (83.13%), Postives = 72/83 (86.75%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVK 60
          MSAGFDLAVIGALLQLCFSS   LLL    IL  FKQSLNL+F SVSMR RPKRTCSGVK
Sbjct: 1  MSAGFDLAVIGALLQLCFSS---LLL----ILGSFKQSLNLLFSSVSMRLRPKRTCSGVK 60

Query: 61 CFGAFHIKRFSFILLLFRRGGFT 84
          CFGAFHIKRFSF+LLLFR+GGFT
Sbjct: 61 CFGAFHIKRFSFLLLLFRKGGFT 76

[Close]

BLAST of Cp4.1LG13g06690 vs. TrEMBL
Match: A0A0D2W3V4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G076200 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.5e-18
Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCFSSS----SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTC 60
          MS  FDLA+IGA LQLCFSSS    S L +   + LC ++Q LNLV P VSMR RPK+TC
Sbjct: 1  MSTEFDLALIGARLQLCFSSSTIFCSHLFIKASLALCFYRQRLNLVLPIVSMRLRPKKTC 60

Query: 61 SGVKCFGAFHIKRFSFILLLFRRGGFT 84
          SGV CFG FHIK+  F LLLF RG +T
Sbjct: 61 SGVGCFGGFHIKQRFFYLLLFLRGAYT 87

[Close]

BLAST of Cp4.1LG13g06690 vs. TrEMBL
Match: A0A0D2RHJ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G183400 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.5e-17
Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCFSSSSS----------LLLSCCMILCCFKQSLNLVFPSVSMRF 60
          MSA FDLA+IGA LQLCFSSS++          LL   CMILC ++Q LN+VF +VSMR 
Sbjct: 1  MSAEFDLALIGAQLQLCFSSSTTTVCARLFITALLAVSCMILCFYRQRLNIVFSTVSMRL 60

Query: 61 RPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT 84
          RPK++CSGV+ FG FHIK+  F L LF RG  T
Sbjct: 61 RPKKSCSGVESFGGFHIKQRFFYLFLFLRGAHT 93

[Close]

BLAST of Cp4.1LG13g06690 vs. TrEMBL
Match: A0A0B0P5P2_GOSAR (WD repeat-containing 55 OS=Gossypium arboreum GN=F383_07479 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.4e-17
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCFSSS----SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTC 60
          MS  FDLA+I A LQLCFSSS    S L +   + LC ++Q LNLV P VSMR RPK+TC
Sbjct: 1  MSTEFDLALIWARLQLCFSSSTVFCSHLFIKASLALCFYRQRLNLVHPIVSMRLRPKKTC 60

Query: 61 SGVKCFGAFHIKRFSFILLLFRRGGFT 84
          SGV CFG FHIK+  F LLLF RG +T
Sbjct: 61 SGVGCFGGFHIKQRFFYLLLFLRGAYT 87

[Close]

BLAST of Cp4.1LG13g06690 vs. TrEMBL
Match: D7T955_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03460 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.1e-15
Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 1


Query: 1   MSAGFDLAVIGALLQL---CFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCS 60
           MSA F L VIGALLQL   CFS    +L   CM+L C +Q  NLVFPS+SMR RP+RTCS
Sbjct: 124 MSAEFVLVVIGALLQLWRICFS----VLYVHCMLLLCLQQRTNLVFPSISMRLRPRRTCS 183

Query: 61  GVKCFGAFHIKRFSFILLLFR 79
           GVKCFG FHIKRF +  L  R
Sbjct: 184 GVKCFGGFHIKRFFYRFLFLR 200

[Close]

BLAST of Cp4.1LG13g06690 vs. TAIR10
Match: AT1G68552.1 (AT1G68552.1 conserved peptide upstream open reading frame 53)

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-10
Identity = 42/86 (48.84%), Postives = 53/86 (61.63%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCF-----SSSSSLLLSCCMI----LCCFKQSLNLVFPSVSMRFR 60
          MSAGF+  VI +L+ +       SS SS  L  C++     CC KQ L L  PS+SMR R
Sbjct: 1  MSAGFESTVILSLIHISSPISSSSSPSSSSLKSCLLNALHFCCNKQRLVLETPSLSMRLR 60

Query: 61 PKRTCSGVKCFGAFHIK--RFSFILL 76
          PKRTCS V+ FG FHIK  +FSF ++
Sbjct: 61 PKRTCSSVEVFGGFHIKQQKFSFFIV 86

[Close]

BLAST of Cp4.1LG13g06690 vs. NCBI nr
Match: gi|700190755|gb|KGN45959.1| (hypothetical protein Csa_6G039145 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 4.6e-25
Identity = 69/83 (83.13%), Postives = 72/83 (86.75%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVK 60
          MSAGFDLAVIGALLQLCFSS   LLL    IL  FKQSLNL+F SVSMR RPKRTCSGVK
Sbjct: 1  MSAGFDLAVIGALLQLCFSS---LLL----ILGSFKQSLNLLFSSVSMRLRPKRTCSGVK 60

Query: 61 CFGAFHIKRFSFILLLFRRGGFT 84
          CFGAFHIKRFSF+LLLFR+GGFT
Sbjct: 61 CFGAFHIKRFSFLLLLFRKGGFT 76

[Close]

BLAST of Cp4.1LG13g06690 vs. NCBI nr
Match: gi|763813138|gb|KJB79990.1| (hypothetical protein B456_013G076200 [Gossypium raimondii])

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17
Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCFSSS----SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTC 60
          MS  FDLA+IGA LQLCFSSS    S L +   + LC ++Q LNLV P VSMR RPK+TC
Sbjct: 1  MSTEFDLALIGARLQLCFSSSTIFCSHLFIKASLALCFYRQRLNLVLPIVSMRLRPKKTC 60

Query: 61 SGVKCFGAFHIKRFSFILLLFRRGGFT 84
          SGV CFG FHIK+  F LLLF RG +T
Sbjct: 61 SGVGCFGGFHIKQRFFYLLLFLRGAYT 87

[Close]

BLAST of Cp4.1LG13g06690 vs. NCBI nr
Match: gi|763783642|gb|KJB50713.1| (hypothetical protein B456_008G183400 [Gossypium raimondii])

HSP 1 Score: 94.7 bits (234), Expect = 7.9e-17
Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCFSSSSS----------LLLSCCMILCCFKQSLNLVFPSVSMRF 60
          MSA FDLA+IGA LQLCFSSS++          LL   CMILC ++Q LN+VF +VSMR 
Sbjct: 1  MSAEFDLALIGAQLQLCFSSSTTTVCARLFITALLAVSCMILCFYRQRLNIVFSTVSMRL 60

Query: 61 RPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT 84
          RPK++CSGV+ FG FHIK+  F L LF RG  T
Sbjct: 61 RPKKSCSGVESFGGFHIKQRFFYLFLFLRGAHT 93

[Close]

BLAST of Cp4.1LG13g06690 vs. NCBI nr
Match: gi|728839243|gb|KHG18686.1| (WD repeat-containing 55 [Gossypium arboreum])

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-16
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 1


Query: 1  MSAGFDLAVIGALLQLCFSSS----SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTC 60
          MS  FDLA+I A LQLCFSSS    S L +   + LC ++Q LNLV P VSMR RPK+TC
Sbjct: 1  MSTEFDLALIWARLQLCFSSSTVFCSHLFIKASLALCFYRQRLNLVHPIVSMRLRPKKTC 60

Query: 61 SGVKCFGAFHIKRFSFILLLFRRGGFT 84
          SGV CFG FHIK+  F LLLF RG +T
Sbjct: 61 SGVGCFGGFHIKQRFFYLLLFLRGAYT 87

[Close]

BLAST of Cp4.1LG13g06690 vs. NCBI nr
Match: gi|297737825|emb|CBI27026.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 88.2 bits (217), Expect = 7.4e-15
Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 1


Query: 1   MSAGFDLAVIGALLQL---CFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCS 60
           MSA F L VIGALLQL   CFS    +L   CM+L C +Q  NLVFPS+SMR RP+RTCS
Sbjct: 124 MSAEFVLVVIGALLQLWRICFS----VLYVHCMLLLCLQQRTNLVFPSISMRLRPRRTCS 183

Query: 61  GVKCFGAFHIKRFSFILLLFR 79
           GVKCFG FHIKRF +  L  R
Sbjct: 184 GVKCFGGFHIKRFFYRFLFLR 200

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g06690 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g06690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAV1_CUCSA	3.2e-25	83.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039145 PE=4 SV=1	[more]
A0A0D2W3V4_GOSRA	8.5e-18	62.07	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G076200 PE=4 SV=1	[more]
A0A0D2RHJ6_GOSRA	5.5e-17	58.06	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G183400 PE=4 SV=1	[more]
A0A0B0P5P2_GOSAR	9.4e-17	60.92	WD repeat-containing 55 OS=Gossypium arboreum GN=F383_07479 PE=4 SV=1	[more]
D7T955_VITVI	5.1e-15	62.96	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03460 PE=4 SV=...	[more]

BLAST of Cp4.1LG13g06690 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68552.1	1.2e-10	48.84	conserved peptide upstream open reading frame 53	[more]

BLAST of Cp4.1LG13g06690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700190755\|gb\|KGN45959.1\|	4.6e-25	83.13	hypothetical protein Csa_6G039145 [Cucumis sativus]	[more]
gi\|763813138\|gb\|KJB79990.1\|	1.2e-17	62.07	hypothetical protein B456_013G076200 [Gossypium raimondii]	[more]
gi\|763783642\|gb\|KJB50713.1\|	7.9e-17	58.06	hypothetical protein B456_008G183400 [Gossypium raimondii]	[more]
gi\|728839243\|gb\|KHG18686.1\|	1.3e-16	60.92	WD repeat-containing 55 [Gossypium arboreum]	[more]
gi\|297737825\|emb\|CBI27026.3\|	7.4e-15	62.96	unnamed protein product [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g06690.1	Cp4.1LG13g06690.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g06690	CmaCh15G009030	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g06690	CmoCh15G009400	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g06690	Lsi08G004050	Bottle gourd (USVL1VR-Ls)	cpelsiB160
Cp4.1LG13g06690	CsaV3_6G003500	Cucumber (Chinese Long) v3	cpecucB0234
Cp4.1LG13g06690	Bhi04G001544	Wax gourd	cpewgoB0251

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g06690	Cucurbita pepo (Zucchini)	cpecpeB209
Cp4.1LG13g06690	Cucumber (Gy14) v1	cgycpeB0952
Cp4.1LG13g06690	Cucurbita maxima (Rimu)	cmacpeB710
Cp4.1LG13g06690	Wild cucumber (PI 183967)	cpecpiB195
Cp4.1LG13g06690	Cucumber (Chinese Long) v2	cpecuB194
Cp4.1LG13g06690	Watermelon (Charleston Gray)	cpewcgB182
Cp4.1LG13g06690	Watermelon (97103) v1	cpewmB172
Cp4.1LG13g06690	Melon (DHL92) v3.5.1	cpemeB170
Cp4.1LG13g06690	Cucumber (Gy14) v2	cgybcpeB737
Cp4.1LG13g06690	Melon (DHL92) v3.6.1	cpemedB203