Cp4.1LG13g06690.1 (mRNA) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g06690.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionconserved peptide upstream open reading frame 53
LocationCp4.1LG13 : 4517828 .. 4520139 (+)
Sequence length2220
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTGGTCAAAATGAAATGGGTGTGGTTTGATTTGCTTAAATTTTGGTTATTTTTATATACCCAATTCTCGCCTTCTTCCTCTGTTGTCTGTGAGTGGAGATTTAGGGAAATTTAGGGTTTGAAAGGCTTCTTCTGTCTGTTTCTCTTGCTCTGCAACTTGAGCGCCTTTCTGAGCTTCTTTTCGCTGTTTTCCTGCACACGCCGTAGGCATACATTGATAAGTTTAACGCTTCCTTTGTCACGTTTTAAGCAAAGCCCAACCATAGCCATTGATTTCTCATCCTATCCCTTCAATCCTTCTTCCCTTTTCTGTACTCCCTTCCCTTTTATTTATTATCTTCGTTTTGCTTATTCTTCCTCTGTTTCAAAGGCAGACGGAGGGAGGGCTTCTTTTTTCCTGTTTTGTTTTCTGATTTTCTCTGAGGTTTGAGGAAGAGGAAGGCAGAGTTCTAGGAGTTGAGGAGCTGCAGATTTATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGTTTCAAGCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGTTTGTGGGGGGTTTTTTCTTCTCTTTTTACTGTCTCGATCTGTTTTGTTTTCTGGGTTTTAATCTGATTTTTGTTTGTGGGTCTTTTGCAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGATTCTCCTTCATTCTCTTGCTCTTCAGAAGAGGGGGTTTCACATAAAACTAACCCTTGATTCGATTTTGGTTCATTCTGTTCGCCTCCTTTTCCCCTTAAGTTTTGGTCTGTTCGAGTTCGAGTTCTATTTTTCCTGAGTTGTAGAGTTTTTTCCTTTTCTTTTCCTCAAAACAATGCCAGAGCCTCGAGTTTTACAGCTAACGAATCAAAAAAGTTTTGGAAAAAAATCCAAATCGAGACCCGAAGAACCTAAAATGACTCGGAAAATCCGTGTCATCTGCAACGATCCAGACGCAACCGATTCGTCTTCGAGCGAAGATGAGGGTGAAATCGGAACGAAATCTCTCAAATTAAAACGAATCGTTCGAGAAATCCATCTACCCTTGTTCCCTTTTCAGTCCTCTAAATCAATGGACGTAACCACTAGTACTCAGAGTTCTTCACAGGACAGCAACAATGGCAGCAAAAACCCAGAGCTGAAGAGGAAGAGGGGTTTAGGCAGTAAAACCATGCCTAAAACCCTCTCCACCCGAAGAAGCGCCTCCCAATACAGAGGAGTTCGTCAAAGAAAGTGGGGCAAATGGGCCGCCGAAATCCGAGACCCTTCCAAGGGAGCTCGCATTTGGCTCGGGACTTACAACACTGCTGAAGAAGCCTCTCAGGCCTACGAATCAAAACGCCTCGAGTTCGAAAACGCCATGGCGGCCGCCCCCAAAGCCAACGTCATCATCTCTTCCTCGTCTTCTTCCTCCGATGAGAACGAGGAAGAATCCGGCACCGCGATCTCTCAAACATCCCCACCCGCCATTGTTGAAATGGAAACCTCTTCCTCTGTTTTGATAAAAGAGGAGGAAGTGATCGACACCAGTTTGATGAACGAACTCCAAATCCCCAATTTGGGATTCGTGGACGAGGATTTCGAAATCAATTTGGGGCTTCCAGAACTGGACCCCTTTTTCATGAACGACATTGGACTATTGTTTGACGACTTCTCCGGCATGGACGACCTTCAGATTTACGGGTTCGATGAGGATGAACCCAGTTGCTTGCCGGATTGCGATTTCAACGATTTTGGAAACGATGAAATATCCTGTTGGGTTGATGAAGCTTTGAATGTTCCTTGCTCATGATAAGAAAGTTTTGCAGATTAGGGTTGAAGAAAACAATGTTTATGTTTTGTTTTGCATAGTGTTTTGACTATGATGTTTATGATGAGGTTTAGTTTTTGTTGGGGTTCTGGTAAAACACTGATTTTCTCGGGAAAATGTTAAAATTTTGCGGGAAAGTTAATGAGTTTTGGTTTATGATGGAGAGTAGATATCCATATGTTCTGGGTTTTCCTGCGCTTTGAGAGCCGTCCAGGGGATGCGGATTTCTTAGTTATTTATAATTCTATTGTTCTTTGTTCTTTGTTCTTTGTTCTTTGTTCTTGTCACGCCTCATTTTGTCTGTTGGATTCATCTGCGACTGCATTTCTTCATCAAACATATTCCAATCAATCTCTACAAAATTTCAACATTGTTTGCATATTGATTTTCA

mRNA sequence

TCTGGTCAAAATGAAATGGGTGTGGTTTGATTTGCTTAAATTTTGGTTATTTTTATATACCCAATTCTCGCCTTCTTCCTCTGTTGTCTGTGAGTGGAGATTTAGGGAAATTTAGGGTTTGAAAGGCTTCTTCTGTCTGTTTCTCTTGCTCTGCAACTTGAGCGCCTTTCTGAGCTTCTTTTCGCTGTTTTCCTGCACACGCCGTAGGCATACATTGATAAGTTTAACGCTTCCTTTGTCACGTTTTAAGCAAAGCCCAACCATAGCCATTGATTTCTCATCCTATCCCTTCAATCCTTCTTCCCTTTTCTGTACTCCCTTCCCTTTTATTTATTATCTTCGTTTTGCTTATTCTTCCTCTGTTTCAAAGGCAGACGGAGGGAGGGCTTCTTTTTTCCTGTTTTGTTTTCTGATTTTCTCTGAGGTTTGAGGAAGAGGAAGGCAGAGTTCTAGGAGTTGAGGAGCTGCAGATTTATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGTTTCAAGCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGATTCTCCTTCATTCTCTTGCTCTTCAGAAGAGGGGGTTTCACATAAAACTAACCCTTGATTCGATTTTGGTTCATTCTGTTCGCCTCCTTTTCCCCTTAAGTTTTGGTCTGTTCGAGTTCGAGTTCTATTTTTCCTGAGTTGTAGAGTTTTTTCCTTTTCTTTTCCTCAAAACAATGCCAGAGCCTCGAGTTTTACAGCTAACGAATCAAAAAAGTTTTGGAAAAAAATCCAAATCGAGACCCGAAGAACCTAAAATGACTCGGAAAATCCGTGTCATCTGCAACGATCCAGACGCAACCGATTCGTCTTCGAGCGAAGATGAGGGTGAAATCGGAACGAAATCTCTCAAATTAAAACGAATCGTTCGAGAAATCCATCTACCCTTGTTCCCTTTTCAGTCCTCTAAATCAATGGACGTAACCACTAGTACTCAGAGTTCTTCACAGGACAGCAACAATGGCAGCAAAAACCCAGAGCTGAAGAGGAAGAGGGGTTTAGGCAGTAAAACCATGCCTAAAACCCTCTCCACCCGAAGAAGCGCCTCCCAATACAGAGGAGTTCGTCAAAGAAAGTGGGGCAAATGGGCCGCCGAAATCCGAGACCCTTCCAAGGGAGCTCGCATTTGGCTCGGGACTTACAACACTGCTGAAGAAGCCTCTCAGGCCTACGAATCAAAACGCCTCGAGTTCGAAAACGCCATGGCGGCCGCCCCCAAAGCCAACGTCATCATCTCTTCCTCGTCTTCTTCCTCCGATGAGAACGAGGAAGAATCCGGCACCGCGATCTCTCAAACATCCCCACCCGCCATTGTTGAAATGGAAACCTCTTCCTCTGTTTTGATAAAAGAGGAGGAAGTGATCGACACCAGTTTGATGAACGAACTCCAAATCCCCAATTTGGGATTCGTGGACGAGGATTTCGAAATCAATTTGGGGCTTCCAGAACTGGACCCCTTTTTCATGAACGACATTGGACTATTGTTTGACGACTTCTCCGGCATGGACGACCTTCAGATTTACGGGTTCGATGAGGATGAACCCAGTTGCTTGCCGGATTGCGATTTCAACGATTTTGGAAACGATGAAATATCCTGTTGGGTTGATGAAGCTTTGAATGTTCCTTGCTCATGATAAGAAAGTTTTGCAGATTAGGGTTGAAGAAAACAATGTTTATGTTTTGTTTTGCATAGTGTTTTGACTATGATGTTTATGATGAGGTTTAGTTTTTGTTGGGGTTCTGGTAAAACACTGATTTTCTCGGGAAAATGTTAAAATTTTGCGGGAAAGTTAATGAGTTTTGGTTTATGATGGAGAGTAGATATCCATATGTTCTGGGTTTTCCTGCGCTTTGAGAGCCGTCCAGGGGATGCGGATTTCTTAGTTATTTATAATTCTATTGTTCTTTGTTCTTTGTTCTTTGTTCTTTGTTCTTGTCACGCCTCATTTTGTCTGTTGGATTCATCTGCGACTGCATTTCTTCATCAAACATATTCCAATCAATCTCTACAAAATTTCAACATTGTTTGCATATTGATTTTCA

Coding sequence (CDS)

ATGTCGGCTGGGTTTGACTTGGCTGTGATTGGGGCTCTGTTGCAGCTCTGTTTTTCTTCTTCTTCTTCCTTACTTCTCTCTTGCTGTATGATTCTCTGCTGTTTCAAGCAGAGCCTTAATCTGGTGTTTCCATCTGTTTCGATGCGTTTCAGACCGAAGAGGACTTGTTCTGGAGTTAAGTGCTTTGGAGCTTTTCATATAAAACGATTCTCCTTCATTCTCTTGCTCTTCAGAAGAGGGGGTTTCACATAA

Protein sequence

MSAGFDLAVIGALLQLCFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT
Homology
[Close]
BLAST of Cp4.1LG13g06690.1 vs. TrEMBL
Match: A0A0A0KAV1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039145 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-25
Identity = 69/83 (83.13%), Postives = 72/83 (86.75%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVK 60
          MSAGFDLAVIGALLQLCFSS   LLL    IL  FKQSLNL+F SVSMR RPKRTCSGVK
Sbjct: 1  MSAGFDLAVIGALLQLCFSS---LLL----ILGSFKQSLNLLFSSVSMRLRPKRTCSGVK 60

Query: 61 CFGAFHIKRFSFILLLFRRGGFT 84
          CFGAFHIKRFSF+LLLFR+GGFT
Sbjct: 61 CFGAFHIKRFSFLLLLFRKGGFT 76

[Close]
BLAST of Cp4.1LG13g06690.1 vs. TrEMBL
Match: A0A0D2W3V4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G076200 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.5e-18
Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCFSSS----SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTC 60
          MS  FDLA+IGA LQLCFSSS    S L +   + LC ++Q LNLV P VSMR RPK+TC
Sbjct: 1  MSTEFDLALIGARLQLCFSSSTIFCSHLFIKASLALCFYRQRLNLVLPIVSMRLRPKKTC 60

Query: 61 SGVKCFGAFHIKRFSFILLLFRRGGFT 84
          SGV CFG FHIK+  F LLLF RG +T
Sbjct: 61 SGVGCFGGFHIKQRFFYLLLFLRGAYT 87

[Close]
BLAST of Cp4.1LG13g06690.1 vs. TrEMBL
Match: A0A0D2RHJ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G183400 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.5e-17
Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCFSSSSS----------LLLSCCMILCCFKQSLNLVFPSVSMRF 60
          MSA FDLA+IGA LQLCFSSS++          LL   CMILC ++Q LN+VF +VSMR 
Sbjct: 1  MSAEFDLALIGAQLQLCFSSSTTTVCARLFITALLAVSCMILCFYRQRLNIVFSTVSMRL 60

Query: 61 RPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT 84
          RPK++CSGV+ FG FHIK+  F L LF RG  T
Sbjct: 61 RPKKSCSGVESFGGFHIKQRFFYLFLFLRGAHT 93

[Close]
BLAST of Cp4.1LG13g06690.1 vs. TrEMBL
Match: A0A0B0P5P2_GOSAR (WD repeat-containing 55 OS=Gossypium arboreum GN=F383_07479 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.4e-17
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCFSSS----SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTC 60
          MS  FDLA+I A LQLCFSSS    S L +   + LC ++Q LNLV P VSMR RPK+TC
Sbjct: 1  MSTEFDLALIWARLQLCFSSSTVFCSHLFIKASLALCFYRQRLNLVHPIVSMRLRPKKTC 60

Query: 61 SGVKCFGAFHIKRFSFILLLFRRGGFT 84
          SGV CFG FHIK+  F LLLF RG +T
Sbjct: 61 SGVGCFGGFHIKQRFFYLLLFLRGAYT 87

[Close]
BLAST of Cp4.1LG13g06690.1 vs. TrEMBL
Match: D7T955_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03460 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.1e-15
Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 1 

Query: 1   MSAGFDLAVIGALLQL---CFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCS 60
           MSA F L VIGALLQL   CFS    +L   CM+L C +Q  NLVFPS+SMR RP+RTCS
Sbjct: 124 MSAEFVLVVIGALLQLWRICFS----VLYVHCMLLLCLQQRTNLVFPSISMRLRPRRTCS 183

Query: 61  GVKCFGAFHIKRFSFILLLFR 79
           GVKCFG FHIKRF +  L  R
Sbjct: 184 GVKCFGGFHIKRFFYRFLFLR 200

[Close]
BLAST of Cp4.1LG13g06690.1 vs. TAIR10
Match: AT1G68552.1 (AT1G68552.1 conserved peptide upstream open reading frame 53)

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-10
Identity = 42/86 (48.84%), Postives = 53/86 (61.63%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCF-----SSSSSLLLSCCMI----LCCFKQSLNLVFPSVSMRFR 60
          MSAGF+  VI +L+ +       SS SS  L  C++     CC KQ L L  PS+SMR R
Sbjct: 1  MSAGFESTVILSLIHISSPISSSSSPSSSSLKSCLLNALHFCCNKQRLVLETPSLSMRLR 60

Query: 61 PKRTCSGVKCFGAFHIK--RFSFILL 76
          PKRTCS V+ FG FHIK  +FSF ++
Sbjct: 61 PKRTCSSVEVFGGFHIKQQKFSFFIV 86

[Close]
BLAST of Cp4.1LG13g06690.1 vs. NCBI nr
Match: gi|700190755|gb|KGN45959.1| (hypothetical protein Csa_6G039145 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 4.6e-25
Identity = 69/83 (83.13%), Postives = 72/83 (86.75%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCSGVK 60
          MSAGFDLAVIGALLQLCFSS   LLL    IL  FKQSLNL+F SVSMR RPKRTCSGVK
Sbjct: 1  MSAGFDLAVIGALLQLCFSS---LLL----ILGSFKQSLNLLFSSVSMRLRPKRTCSGVK 60

Query: 61 CFGAFHIKRFSFILLLFRRGGFT 84
          CFGAFHIKRFSF+LLLFR+GGFT
Sbjct: 61 CFGAFHIKRFSFLLLLFRKGGFT 76

[Close]
BLAST of Cp4.1LG13g06690.1 vs. NCBI nr
Match: gi|763813138|gb|KJB79990.1| (hypothetical protein B456_013G076200 [Gossypium raimondii])

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17
Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCFSSS----SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTC 60
          MS  FDLA+IGA LQLCFSSS    S L +   + LC ++Q LNLV P VSMR RPK+TC
Sbjct: 1  MSTEFDLALIGARLQLCFSSSTIFCSHLFIKASLALCFYRQRLNLVLPIVSMRLRPKKTC 60

Query: 61 SGVKCFGAFHIKRFSFILLLFRRGGFT 84
          SGV CFG FHIK+  F LLLF RG +T
Sbjct: 61 SGVGCFGGFHIKQRFFYLLLFLRGAYT 87

[Close]
BLAST of Cp4.1LG13g06690.1 vs. NCBI nr
Match: gi|763783642|gb|KJB50713.1| (hypothetical protein B456_008G183400 [Gossypium raimondii])

HSP 1 Score: 94.7 bits (234), Expect = 7.9e-17
Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCFSSSSS----------LLLSCCMILCCFKQSLNLVFPSVSMRF 60
          MSA FDLA+IGA LQLCFSSS++          LL   CMILC ++Q LN+VF +VSMR 
Sbjct: 1  MSAEFDLALIGAQLQLCFSSSTTTVCARLFITALLAVSCMILCFYRQRLNIVFSTVSMRL 60

Query: 61 RPKRTCSGVKCFGAFHIKRFSFILLLFRRGGFT 84
          RPK++CSGV+ FG FHIK+  F L LF RG  T
Sbjct: 61 RPKKSCSGVESFGGFHIKQRFFYLFLFLRGAHT 93

[Close]
BLAST of Cp4.1LG13g06690.1 vs. NCBI nr
Match: gi|728839243|gb|KHG18686.1| (WD repeat-containing 55 [Gossypium arboreum])

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-16
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 1 

Query: 1  MSAGFDLAVIGALLQLCFSSS----SSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTC 60
          MS  FDLA+I A LQLCFSSS    S L +   + LC ++Q LNLV P VSMR RPK+TC
Sbjct: 1  MSTEFDLALIWARLQLCFSSSTVFCSHLFIKASLALCFYRQRLNLVHPIVSMRLRPKKTC 60

Query: 61 SGVKCFGAFHIKRFSFILLLFRRGGFT 84
          SGV CFG FHIK+  F LLLF RG +T
Sbjct: 61 SGVGCFGGFHIKQRFFYLLLFLRGAYT 87

[Close]
BLAST of Cp4.1LG13g06690.1 vs. NCBI nr
Match: gi|297737825|emb|CBI27026.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 88.2 bits (217), Expect = 7.4e-15
Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 1 

Query: 1   MSAGFDLAVIGALLQL---CFSSSSSLLLSCCMILCCFKQSLNLVFPSVSMRFRPKRTCS 60
           MSA F L VIGALLQL   CFS    +L   CM+L C +Q  NLVFPS+SMR RP+RTCS
Sbjct: 124 MSAEFVLVVIGALLQLWRICFS----VLYVHCMLLLCLQQRTNLVFPSISMRLRPRRTCS 183

Query: 61  GVKCFGAFHIKRFSFILLLFR 79
           GVKCFG FHIKRF +  L  R
Sbjct: 184 GVKCFGGFHIKRFFYRFLFLR 200

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g06690.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG13g06690.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAV1_CUCSA3.2e-2583.13Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039145 PE=4 SV=1[more]
A0A0D2W3V4_GOSRA8.5e-1862.07Uncharacterized protein OS=Gossypium raimondii GN=B456_013G076200 PE=4 SV=1[more]
A0A0D2RHJ6_GOSRA5.5e-1758.06Uncharacterized protein OS=Gossypium raimondii GN=B456_008G183400 PE=4 SV=1[more]
A0A0B0P5P2_GOSAR9.4e-1760.92WD repeat-containing 55 OS=Gossypium arboreum GN=F383_07479 PE=4 SV=1[more]
D7T955_VITVI5.1e-1562.96Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03460 PE=4 SV=... [more]
BLAST of Cp4.1LG13g06690.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68552.11.2e-1048.84 conserved peptide upstream open reading frame 53[more]
BLAST of Cp4.1LG13g06690.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190755|gb|KGN45959.1|4.6e-2583.13hypothetical protein Csa_6G039145 [Cucumis sativus][more]
gi|763813138|gb|KJB79990.1|1.2e-1762.07hypothetical protein B456_013G076200 [Gossypium raimondii][more]
gi|763783642|gb|KJB50713.1|7.9e-1758.06hypothetical protein B456_008G183400 [Gossypium raimondii][more]
gi|728839243|gb|KHG18686.1|1.3e-1660.92WD repeat-containing 55 [Gossypium arboreum][more]
gi|297737825|emb|CBI27026.3|7.4e-1562.96unnamed protein product [Vitis vinifera][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG13g06690Cp4.1LG13g06690gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG13g06690.1:five_prime_utr:001Cp4.1LG13g06690.1:five_prime_utr:001five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG13g06690.1:cds:002Cp4.1LG13g06690.1:cds:002CDS
Cp4.1LG13g06690.1:cds:001Cp4.1LG13g06690.1:cds:001CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG13g06690.1:three_prime_utr:001Cp4.1LG13g06690.1:three_prime_utr:001three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG13g06690.1Cp4.1LG13g06690.1-proteinpolypeptide