Cp4.1LG12g07390 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g07390
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSerine-rich protein-related
LocationCp4.1LG12 : 6950388 .. 6952953 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTATCAAATTATGAAAAGTACTAAGGTGTATCTTGGGAGCCCACCGTCTTTTTGCAACCACAATTTGTCATATGACTGAACTCTTTTTATCAGTTTTTTCCCGGATGATCGTTGGTGTGGGCTGCAAAAAGACGAGCGTCACCCGGTATGCACCCGAGTATTGCACTCAAGTTATTGAATCATCGACCTATGCCCCAAGATGACAAACATCACCAAGACGAGGGGCAGTAAGTAAACTATTAATATGTTACTTTTGTTCTTCATATTCTCCTTAGAATTCTTTACTTTTGCTACATCAGGAAACAGACCCATGTTCCTATTAAAGTTATGATAAAAGGGAACGGGCTCAGGTTTACACTTAAAGAACTTTTTGTATGTAGTTATTTTAAGAGACATAACTGCTTGAGAATTGGATACCTTTATTTGTTTTGAGAAATATGTTTCCAGCTCACGCCCACCGCTAACAGATATTGTCCATTTTGGTCTGTTACGTATCACCGCCAGCCTCACGGTTTTAAAACGCATCTGTTAGGGAGAGATTTTCACACAAGAATGTTTCGTTCTCCTCTCCAACTGATGTGAGATCTCACAATCTACCTCCCCTTGGGGGCCAGCGTTTTCGTTGGCACATCACCCGAATCCGATCTCTAACTTTGACATAATAGTTGATATCAAAGTTGCAGAGCCTTTGAACATCTCCAACCATCTTTTACTCTTTTTCTTTTATTTTGTAATAAAATATTTTAAAATTTTCTTTTAAATGTTTTTTTTAGCTCCGTTCCAAGTACGTAAAAAGACCAAACAGCCCCTGCAGGTTACGGCTACAGTCGCAAGAAGCGAGGACAAGTTAGGGAAAAAAGTGGAATTAAATTACAAATTTACCCCTCCTACGAAGCTTATTTCCGAGGGGAAAAGAGTTGTATAAATAAAAACGCCGAAAATTAATTCAGTCATTCTCACAGGCAGTTACAACTTCCCGTCTCCAATGGCGAACAAAACCGCTCCCTCTTCCCGCCTCTGTCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCATCCTCCACCGTCGTCCCCGGAAGGCATCCGACAAAACGACGCTGTTGCGTGGAAGCCAATCGAAGGCCACCACTGCCACTTCCACGGCGACCGATCTCTTTAAAGTGTTTCTGATGCAGGCCATCAAGCCTTCGAGTCATGATCTTCGGAGGAGGAGGAATTTCCAGCCTAAACCCTCCCGATTCTGCAATGTCGCTTCTGATCATCGCTTGGCAGTTTCTTCATCGTGAATCGCGTACGTATTAGTATGATTTTAAATTCTCTGTCGTGGATCGTCTCTAGAGATGAAGTTCAGAGAACGTAATTAGTATTTTGTTGCCGTGTTTGATTGAACTGAAATTGTCTTGGTATATAATTGGCGGATGGATTTTGTAAATTGTGACGTATTGTTATAGATCAGTAGTGAAGAGGAGAAGTTTGTATTACATAATCTCGTTATTAATCTCGAGTTCTGAGTTTACCAAAATTTTGATGTACTTGAAACCTAGAAAATGGAGTCTCATATCTTTATTTAAATGACTATTTTGTATAAACCGTCTTCTTTTGAAATTATCATTTTAGATTCCCAAATTTTGTGATTGTATTGGTTTAGTGAATCCATTTAGATTATTAATCCGAGTGTTTTTCACTATTGAAAATTTTTATTCAACTGGTTGAATCTTAGAAGTTGAAGAATATAAGTTGATTTTTAAAATAGTTAAATATTCTACTTCTCATATTTATTTCATTGTTCTAGAAATTAAACTTTTCTTTTTAGAAGAAATCTTAAAACTTGTAATATCTTGGTGACGGTGAATACGTATATTATGTACTATACCGAGATGTCTATATGTTGTCAATTTATATGAATTTATTTCAATGATTTGCTGTCATCGAATGTACTTCATGTGAAGTTTCATCTTTATGTAAAGTACTTCATGTGAAGTTTCATCTTATGTAAAGAGTTTCTCAATTAATGTAAAGAGTTTCTCTCTAATTGAGTGCAAGGGTTATGCTTTGTCATTGGCGGCCCCAGAAACTTATGCAGGAAGACGGGGAACTATTAGACCCAGAATGTTATTGTCGAATGTCCATACGTGCAAAGGTTTGTGGTAAAAATGGTATCAAATAAGGTGTTTTAATCATGGTACTAAGAACAAGTTTCAAGTTACAATTTAGTTAGTGGTTATAATGGTATTGATTTACTTGAAAAACTACCGCCTTTTTCGATTGATCACATGGTATTTTAGGATTTATTTTCAAGGGTATAGTTGCAAAACAATATCAACTAACGTGTTTTAATCAGCAGCTTGATAAGGTGTTTTAATCAGCAGCTTGATACAGTTGCAAAACAATATCAACTTGTTAAGTACAGGGTATTCTGTTCAAGAAGTTTTGAGCAGTGCAGCTCGAGTAAGATGAAACATTCAAACGTTAGCATACACAACTCTTTCGATAGCGGTCCCCTAATTCACGAGCAATGCCATTTGCGTATGCGTTCTCGAATCGACGCCATATAA

mRNA sequence

ATGAAGCTCCGTTCCAAGTACGTAAAAAGACCAAACAGCCCCTGCAGGTTACGGCTACAGTCGCAAGAAGCGAGGACAAGCAGTTACAACTTCCCGTCTCCAATGGCGAACAAAACCGCTCCCTCTTCCCGCCTCTGTCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCATCCTCCACCGTCGTCCCCGGAAGGCATCCGACAAAACGACGCTGTTGCGTGGAAGCCAATCGAAGGCCACCACTGCCACTTCCACGGCGACCGATCTCTTTAAAGTGTTTCTGATGCAGGCCATCAAGCCTTCGAGTCATGATCTTCGGAGGAGGAGGAATTTCCAGCCTAAACCCTCCCGATTCTGCAATGTCGCTTCTGATCATCGCTTGGCAGTTTCTTCATCGGTATTCTGTTCAAGAAGTTTTGAGCAGTGCAGCTCGAGTAAGATGAAACATTCAAACGTTAGCATACACAACTCTTTCGATAGCGGTCCCCTAATTCACGAGCAATGCCATTTGCGTATGCGTTCTCGAATCGACGCCATATAA

Coding sequence (CDS)

ATGAAGCTCCGTTCCAAGTACGTAAAAAGACCAAACAGCCCCTGCAGGTTACGGCTACAGTCGCAAGAAGCGAGGACAAGCAGTTACAACTTCCCGTCTCCAATGGCGAACAAAACCGCTCCCTCTTCCCGCCTCTGTCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCATCCTCCACCGTCGTCCCCGGAAGGCATCCGACAAAACGACGCTGTTGCGTGGAAGCCAATCGAAGGCCACCACTGCCACTTCCACGGCGACCGATCTCTTTAAAGTGTTTCTGATGCAGGCCATCAAGCCTTCGAGTCATGATCTTCGGAGGAGGAGGAATTTCCAGCCTAAACCCTCCCGATTCTGCAATGTCGCTTCTGATCATCGCTTGGCAGTTTCTTCATCGGTATTCTGTTCAAGAAGTTTTGAGCAGTGCAGCTCGAGTAAGATGAAACATTCAAACGTTAGCATACACAACTCTTTCGATAGCGGTCCCCTAATTCACGAGCAATGCCATTTGCGTATGCGTTCTCGAATCGACGCCATATAA

Protein sequence

MKLRSKYVKRPNSPCRLRLQSQEARTSSYNFPSPMANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLLRGSQSKATTATSTATDLFKVFLMQAIKPSSHDLRRRRNFQPKPSRFCNVASDHRLAVSSSVFCSRSFEQCSSSKMKHSNVSIHNSFDSGPLIHEQCHLRMRSRIDAI
Homology
[Close]
BLAST of Cp4.1LG12g07390 vs. TrEMBL
Match: A0A0A0K698_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432210 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-26
Identity = 73/106 (68.87%), Postives = 80/106 (75.47%), Query Frame = 1 

Query: 35  MANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLL-----RGSQSKATTATSTA 94
           M NKTA SSRLCLCAPTTHPGSFRC LHRR   +S KT  L     RGSQSKA  AT+T 
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKA-AATTTD 60

Query: 95  TDLFKVFLMQAIKPSSHDLRRRRNFQPKPSRFCNV--ASDHRLAVS 134
             L K FLMQ +KPSSHDL+RR +F+PKPSRFC+V  ASD RLAVS
Sbjct: 61  HHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 105

[Close]
BLAST of Cp4.1LG12g07390 vs. TrEMBL
Match: A0A061GP27_THECC (Serine-rich protein-related OS=Theobroma cacao GN=TCM_038231 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-17
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1 

Query: 36  ANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLLRGSQSKATTATSTATDLFKV 95
           ++  +P+SR CLC+PTTHPGSFRC LHR   K   +T ++R S +    A     +  K 
Sbjct: 9   SSSKSPTSRTCLCSPTTHPGSFRCNLHRNFNKPPGRTRVVRVSPNHWELAVIAKANSIKA 68

Query: 96  FLMQAIKPSSHDLRRRRNFQPKPSRFC 123
            L+Q IKPSSHD++RRRNFQPKPSRFC
Sbjct: 69  ILLQIIKPSSHDMQRRRNFQPKPSRFC 95

[Close]
BLAST of Cp4.1LG12g07390 vs. TrEMBL
Match: M0S5A9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-17
Identity = 57/113 (50.44%), Postives = 70/113 (61.95%), Query Frame = 1 

Query: 21  SQEARTSSYNFPSPMANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLLRGSQS 80
           S+     S N  S  ++K    SR CLC+PTTHPGSFRC LHR PRK+S ++    GS  
Sbjct: 523 SRPPSMDSKNSASSSSSKPHSPSRPCLCSPTTHPGSFRCKLHRGPRKSSGRSVAHAGSPE 582

Query: 81  KATTATSTATDLFKVFLMQAIKPSSHDLRRRRNFQPKPSRFCNVASDHRLAVS 134
               A +T+       LMQ I+PSSHDLRRRR+FQPKPSRF  +  D R AV+
Sbjct: 583 TKGPAKATS---MGGLLMQMIRPSSHDLRRRRHFQPKPSRFFLMKGDGRGAVA 632

[Close]
BLAST of Cp4.1LG12g07390 vs. TrEMBL
Match: A0A151SWE2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_014536 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-16
Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 1 

Query: 35  MANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLLRGSQSKATTATSTA-TDLF 94
           MA++ +PS R CLC+PTTH GSFRC LH+   K   +T     SQS    ++  A  +  
Sbjct: 1   MASRISPSKRACLCSPTTHSGSFRCSLHK---KKPPRTVSRNPSQSHHLDSSMVAKANSL 60

Query: 95  KVFLMQAIKPSSHDLRRRRNFQPKPSRFCNV-ASDHRLAVS 134
           K FL+Q IKPSSHDL RR+NFQPKPSRFC +  ++  +AVS
Sbjct: 61  KAFLLQVIKPSSHDLHRRKNFQPKPSRFCLINGNNDAVAVS 98

[Close]
BLAST of Cp4.1LG12g07390 vs. TrEMBL
Match: B9SZN1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1372180 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.5e-16
Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = 1 

Query: 27  SSYNFPSPMANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLLRGSQSKATTAT 86
           +S N  S   + T   +R CLC+PTTHPGSFRC LHR   + S+++     S  K   + 
Sbjct: 2   ASKNASSNSKSHTHQQARTCLCSPTTHPGSFRCSLHRNFNRFSNRSRTAHVSPRKWELSV 61

Query: 87  STATDLFKVFLMQAIKPSSHDLRRRRNFQPKPSRFC 123
               +  K FL+Q IKPSSHDL+RRRNFQP+P+RFC
Sbjct: 62  IAKANSLKAFLLQIIKPSSHDLQRRRNFQPRPTRFC 97

[Close]
BLAST of Cp4.1LG12g07390 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related)

HSP 1 Score: 57.8 bits (138), Expect = 8.2e-09
Identity = 45/143 (31.47%), Postives = 67/143 (46.85%), Query Frame = 1 

Query: 10  RPNSPCRLRLQSQEARTSSYNFP------SP------MANKTAPS-----SRLCLCAPTT 69
           R  SP R+ L + +  + S+ +       SP      ++    PS     SR C+C+PTT
Sbjct: 70  RSASPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKISRRCMCSPTT 129

Query: 70  HPGSFRCILHR---RPRKASDKTTLLRGSQSKATTATSTATDLFKV-------FLMQAIK 126
           HPGSFRC LH+    P      +    G   + +  T++   +  V        L   I+
Sbjct: 130 HPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIR 189

[Close]
BLAST of Cp4.1LG12g07390 vs. TAIR10
Match: AT5G20370.1 (AT5G20370.1 serine-rich protein-related)

HSP 1 Score: 57.8 bits (138), Expect = 8.2e-09
Identity = 45/140 (32.14%), Postives = 61/140 (43.57%), Query Frame = 1 

Query: 9   KRPNSPCRLRLQSQEARTSSYNFPSPMA---NKTAPSSRLCLCAPTTHPGSFRCILHRRP 68
           +R  SPC   L  +    S  + P P     +    + R CLC+PTTHPGSFRC  HRR 
Sbjct: 31  QRSPSPCNKNLNLRLKFYSPGSIPKPSVVTVSSNHQTKRKCLCSPTTHPGSFRCSFHRRL 90

Query: 69  RKASDKT----TLLRGSQSKATTATSTATDLFKVFLMQAI-------------------- 122
                KT    T+ R ++   T   +   +L K+ LM ++                    
Sbjct: 91  EHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLA 150

[Close]
BLAST of Cp4.1LG12g07390 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related)

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-08
Identity = 33/99 (33.33%), Postives = 51/99 (51.52%), Query Frame = 1 

Query: 37  NKTAPSSRLCLCAPTTHPGSFRCILHR---RPRKASDKTTLLRGSQSKATTATSTATDLF 96
           +K   S R C+C+PTTHPGSFRC LH+    P      +    G   + +  T++   + 
Sbjct: 117 HKIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIG 176

Query: 97  KV-------FLMQAIKPSSHDLRRRRNFQPKPSRFCNVA 126
            V        L   I+PSSH L+RR  ++P+ SR  +++
Sbjct: 177 GVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMS 215

[Close]
BLAST of Cp4.1LG12g07390 vs. NCBI nr
Match: gi|700190007|gb|KGN45240.1| (hypothetical protein Csa_7G432210 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 4.1e-26
Identity = 73/106 (68.87%), Postives = 80/106 (75.47%), Query Frame = 1 

Query: 35  MANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLL-----RGSQSKATTATSTA 94
           M NKTA SSRLCLCAPTTHPGSFRC LHRR   +S KT  L     RGSQSKA  AT+T 
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKA-AATTTD 60

Query: 95  TDLFKVFLMQAIKPSSHDLRRRRNFQPKPSRFCNV--ASDHRLAVS 134
             L K FLMQ +KPSSHDL+RR +F+PKPSRFC+V  ASD RLAVS
Sbjct: 61  HHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 105

[Close]
BLAST of Cp4.1LG12g07390 vs. NCBI nr
Match: gi|659122451|ref|XP_008461151.1| (PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo])

HSP 1 Score: 125.2 bits (313), Expect = 1.2e-25
Identity = 71/105 (67.62%), Postives = 76/105 (72.38%), Query Frame = 1 

Query: 35  MANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTL----LRGSQSKATTATSTAT 94
           M NKTA SSRLCLCAPTTHPGSFRC LHRRP  +S KT        GSQSKA T T+T  
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAAT-TTTDH 60

Query: 95  DLFKVFLMQAIKPSSHDLRRRRNFQPKPSRFCNVAS--DHRLAVS 134
              K FLMQ +KPSSH L+RR NFQPKPSRFCN+ S  D RLAVS
Sbjct: 61  YFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

[Close]
BLAST of Cp4.1LG12g07390 vs. NCBI nr
Match: gi|590578918|ref|XP_007013642.1| (Serine-rich protein-related [Theobroma cacao])

HSP 1 Score: 97.8 bits (242), Expect = 2.0e-17
Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1 

Query: 36  ANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLLRGSQSKATTATSTATDLFKV 95
           ++  +P+SR CLC+PTTHPGSFRC LHR   K   +T ++R S +    A     +  K 
Sbjct: 9   SSSKSPTSRTCLCSPTTHPGSFRCNLHRNFNKPPGRTRVVRVSPNHWELAVIAKANSIKA 68

Query: 96  FLMQAIKPSSHDLRRRRNFQPKPSRFC 123
            L+Q IKPSSHD++RRRNFQPKPSRFC
Sbjct: 69  ILLQIIKPSSHDMQRRRNFQPKPSRFC 95

[Close]
BLAST of Cp4.1LG12g07390 vs. NCBI nr
Match: gi|695003363|ref|XP_009385099.1| (PREDICTED: uncharacterized protein LOC103972467 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 97.4 bits (241), Expect = 2.7e-17
Identity = 56/106 (52.83%), Postives = 68/106 (64.15%), Query Frame = 1 

Query: 28  SYNFPSPMANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLLRGSQSKATTATS 87
           S N  S  ++K    SR CLC+PTTHPGSFRC LHR PRK+S ++    GS      A +
Sbjct: 3   SKNSASSSSSKPHSPSRPCLCSPTTHPGSFRCKLHRGPRKSSGRSVAHAGSPETKGPAKA 62

Query: 88  TATDLFKVFLMQAIKPSSHDLRRRRNFQPKPSRFCNVASDHRLAVS 134
           T+       LMQ I+PSSHDLRRRR+FQPKPSRF  +  D R AV+
Sbjct: 63  TS---MGGLLMQMIRPSSHDLRRRRHFQPKPSRFFLMKGDGRGAVA 105

[Close]
BLAST of Cp4.1LG12g07390 vs. NCBI nr
Match: gi|672179197|ref|XP_008809760.1| (PREDICTED: uncharacterized protein LOC103721363 [Phoenix dactylifera])

HSP 1 Score: 97.4 bits (241), Expect = 2.7e-17
Identity = 50/97 (51.55%), Postives = 58/97 (59.79%), Query Frame = 1 

Query: 33  SPMANKTAPSSRLCLCAPTTHPGSFRCILHRRPRKASDKTTLLRGSQSKATTATSTATDL 92
           S  + K+   SR+CLCAPTTHPGSFRC LHR PRK S  +       S+           
Sbjct: 6   STSSTKSNAPSRICLCAPTTHPGSFRCSLHRSPRKISSPSMADSNPSSRGALKGGKKASS 65

Query: 93  FKVFLMQAIKPSSHDLRRRRNFQPKPSRFCNVASDHR 130
            +  LMQ I PSSHDL RRRNFQPKPSRFC +   +R
Sbjct: 66  ARALLMQIINPSSHDLSRRRNFQPKPSRFCLMNESNR 102

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g07390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g07390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K698_CUCSA2.9e-2668.87Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432210 PE=4 SV=1[more]
A0A061GP27_THECC1.4e-1754.02Serine-rich protein-related OS=Theobroma cacao GN=TCM_038231 PE=4 SV=1[more]
M0S5A9_MUSAM2.4e-1750.44Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
A0A151SWE2_CAJCA2.7e-1651.49Uncharacterized protein OS=Cajanus cajan GN=KK1_014536 PE=4 SV=1[more]
B9SZN1_RICCO3.5e-1648.96Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1372180 PE=4 SV=1[more]
BLAST of Cp4.1LG12g07390 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G11090.18.2e-0931.47 serine-rich protein-related[more]
AT5G20370.18.2e-0932.14 serine-rich protein-related[more]
AT5G25280.12.4e-0833.33 serine-rich protein-related[more]
BLAST of Cp4.1LG12g07390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190007|gb|KGN45240.1|4.1e-2668.87hypothetical protein Csa_7G432210 [Cucumis sativus][more]
gi|659122451|ref|XP_008461151.1|1.2e-2567.62PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo][more]
gi|590578918|ref|XP_007013642.1|2.0e-1754.02Serine-rich protein-related [Theobroma cacao][more]
gi|695003363|ref|XP_009385099.1|2.7e-1752.83PREDICTED: uncharacterized protein LOC103972467 [Musa acuminata subsp. malaccens... [more]
gi|672179197|ref|XP_008809760.1|2.7e-1751.55PREDICTED: uncharacterized protein LOC103721363 [Phoenix dactylifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07390.1Cp4.1LG12g07390.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33132FAMILY NOT NAMEDcoord: 33..122
score: 1.2
NoneNo IPR availablePANTHERPTHR33132:SF5SUBFAMILY NOT NAMEDcoord: 33..122
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g07390Cucsa.105710Cucumber (Gy14) v1cgycpeB0229
Cp4.1LG12g07390CmaCh08G006060Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g07390Csa7G432210Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g07390MELO3C023447Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g07390CSPI07G20320Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g07390Lsi02G026870Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g07390MELO3C023447.2Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g07390CsaV3_7G032120Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g07390CsaV3_2G032230Cucumber (Chinese Long) v3cpecucB0147
Cp4.1LG12g07390CsGy7G018610Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g07390Carg03937Silver-seed gourdcarcpeB1356
Cp4.1LG12g07390Carg09605Silver-seed gourdcarcpeB1424
Cp4.1LG12g07390Carg23129Silver-seed gourdcarcpeB0209
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g07390Cp4.1LG17g08700Cucurbita pepo (Zucchini)cpecpeB157
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g07390Cucurbita pepo (Zucchini)cpecpeB108
Cp4.1LG12g07390Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g07390Cucurbita pepo (Zucchini)cpecpeB191
Cp4.1LG12g07390Cucumber (Gy14) v1cgycpeB0431
Cp4.1LG12g07390Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g07390Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g07390Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g07390Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g07390Wild cucumber (PI 183967)cpecpiB130
Cp4.1LG12g07390Wild cucumber (PI 183967)cpecpiB131
Cp4.1LG12g07390Bottle gourd (USVL1VR-Ls)cpelsiB109
Cp4.1LG12g07390Bottle gourd (USVL1VR-Ls)cpelsiB127
Cp4.1LG12g07390Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g07390Watermelon (Charleston Gray)cpewcgB136
Cp4.1LG12g07390Watermelon (Charleston Gray)cpewcgB148
Cp4.1LG12g07390Watermelon (Charleston Gray)cpewcgB152
Cp4.1LG12g07390Watermelon (97103) v1cpewmB131
Cp4.1LG12g07390Watermelon (97103) v1cpewmB142
Cp4.1LG12g07390Watermelon (97103) v1cpewmB148
Cp4.1LG12g07390Melon (DHL92) v3.5.1cpemeB131
Cp4.1LG12g07390Cucumber (Gy14) v2cgybcpeB177
Cp4.1LG12g07390Silver-seed gourdcarcpeB0280
Cp4.1LG12g07390Silver-seed gourdcarcpeB0811
Cp4.1LG12g07390Cucumber (Chinese Long) v3cpecucB0150
Cp4.1LG12g07390Wax gourdcpewgoB0201