Csa7G432210 (gene) Cucumber (Chinese Long) v2

NameCsa7G432210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionSerine-rich protein
LocationChr7 : 17131126 .. 17131443 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGAACAAAACCGCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCCACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGTCGTCTTTCGAATTCCTCCCACAAAACCCCGCCGCTGCCGCCTCCTTCTCCGCGTGGAAGCCAGTCGAAGGCGGCAGCGACGACGACGGATCATCATTTGCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGATCTTCAAAGACGGGGAAGTTTCGAGCCTAAACCTTCTCGATTCTGCAGTGTCGTCTCTGCTTCGGATCCTCGTTTGGCTGTTTCTTGA

mRNA sequence

ATGCCGAACAAAACCGCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCCACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGTCGTCTTTCGAATTCCTCCCACAAAACCCCGCCGCTGCCGCCTCCTTCTCCGCGTGGAAGCCAGTCGAAGGCGGCAGCGACGACGACGGATCATCATTTGCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGATCTTCAAAGACGGGGAAGTTTCGAGCCTAAACCTTCTCGATTCTGCAGTGTCGTCTCTGCTTCGGATCCTCGTTTGGCTGTTTCTTGA

Coding sequence (CDS)

ATGCCGAACAAAACCGCTTCCTCTTCCCGCCTCTGCCTCTGTGCTCCCACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGTCGTCTTTCGAATTCCTCCCACAAAACCCCGCCGCTGCCGCCTCCTTCTCCGCGTGGAAGCCAGTCGAAGGCGGCAGCGACGACGACGGATCATCATTTGCTTAAGGCGTTTCTGATGCAGATCGTAAAGCCGTCGAGTCATGATCTTCAAAGACGGGGAAGTTTCGAGCCTAAACCTTCTCGATTCTGCAGTGTCGTCTCTGCTTCGGATCCTCGTTTGGCTGTTTCTTGA

Protein sequence

MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDHHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS*
BLAST of Csa7G432210 vs. TrEMBL
Match: A0A0A0K698_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432210 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 4.2e-54
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1

Query: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH 60
           MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH 60

Query: 61  HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 106
           HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS
Sbjct: 61  HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 105

BLAST of Csa7G432210 vs. TrEMBL
Match: A0A061G8R4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_027325 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18
Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 1

Query: 7   SSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAA-----TTTDHH 66
           SS+R CLC+PTTHPGSFRCS HR    +S K+   P  +    +SKAA      T +   
Sbjct: 10  SSARTCLCSPTTHPGSFRCSFHRSFGKASTKSAAAPHANR--VESKAATMMMMTTASKAC 69

Query: 67  LLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASD 100
           L+KAFLMQI+KPSSHDLQRR +F+ KP+RFC + S+++
Sbjct: 70  LIKAFLMQIIKPSSHDLQRRRNFQRKPTRFCPLNSSAN 105

BLAST of Csa7G432210 vs. TrEMBL
Match: B9SZN1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1372180 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-17
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 1

Query: 5   TASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDHHLLK 64
           T   +R CLC+PTTHPGSFRCSLHR  +  S+++      SPR  +    A       LK
Sbjct: 14  THQQARTCLCSPTTHPGSFRCSLHRNFNRFSNRSRTAHV-SPRKWELSVIAKANS---LK 73

Query: 65  AFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 106
           AFL+QI+KPSSHDLQRR +F+P+P+RFC +++A+   +AVS
Sbjct: 74  AFLLQIIKPSSHDLQRRRNFQPRPTRFC-LMNANRDGVAVS 109

BLAST of Csa7G432210 vs. TrEMBL
Match: A0A151SWE2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_014536 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-17
Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 1

Query: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH 60
           M ++ + S R CLC+PTTH GSFRCSLH++      K P     +P  S    ++     
Sbjct: 1   MASRISPSKRACLCSPTTHSGSFRCSLHKK------KPPRTVSRNPSQSHHLDSSMVAKA 60

Query: 61  HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 106
           + LKAFL+Q++KPSSHDL RR +F+PKPSRFC +++ ++  +AVS
Sbjct: 61  NSLKAFLLQVIKPSSHDLHRRKNFQPKPSRFC-LINGNNDAVAVS 98

BLAST of Csa7G432210 vs. TrEMBL
Match: A0A164U5H0_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025532 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.4e-17
Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 1

Query: 1   MPNKTASSS----RLCLCAPTTHPGSFRCSLHR--RLSNSSHKTPPLPPPSPRGSQSKAA 60
           M +K+ SSS    R CLC+PTTHPGSFRCS HR  R S+S+  +  L   +      + A
Sbjct: 1   MASKSRSSSFASGRACLCSPTTHPGSFRCSRHRTWRFSSSARSSSSLSCTAKNNRSVECA 60

Query: 61  ATTTD------HHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPR-LAVS 106
           ++ ++      + LLKAFL+QI++PS H+LQRRG F PKP+RFC+  + +  + L+VS
Sbjct: 61  SSVSNSSSSKMNQLLKAFLLQIIRPSRHNLQRRGIFRPKPTRFCNTSACTQTKGLSVS 118

BLAST of Csa7G432210 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related)

HSP 1 Score: 74.3 bits (181), Expect = 5.0e-14
Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 1

Query: 3   NKTASSSRLCLCAPTTHPGSFRCSLHRRLSN------SSHKTPPLPPPSPRGSQSKAAAT 62
           +K   S R C+C+PTTHPGSFRCSLH+ ++N      +S+ T  L       + S     
Sbjct: 117 HKIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIG 176

Query: 63  TTDHHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASD 100
             +   ++  L  +++PSSH L+RR ++EP+ SR  S+  A D
Sbjct: 177 GVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

BLAST of Csa7G432210 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related)

HSP 1 Score: 72.8 bits (177), Expect = 1.4e-13
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = 1

Query: 2   PNKTASSSRLCLCAPTTHPGSFRCSLHRRLSN------SSHKTPPLPPPSPRGSQSKAAA 61
           P+     SR C+C+PTTHPGSFRCSLH+ ++N      +S+ T  L       + S    
Sbjct: 113 PSHNHKISRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRI 172

Query: 62  TTTDHHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASD 100
              +   ++  L  +++PSSH L+RR +++P+PSR   +  A +
Sbjct: 173 GGVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

BLAST of Csa7G432210 vs. TAIR10
Match: AT5G20370.1 (AT5G20370.1 serine-rich protein-related)

HSP 1 Score: 57.8 bits (138), Expect = 4.8e-09
Identity = 36/104 (34.62%), Postives = 40/104 (38.46%), Query Frame = 1

Query: 8   SSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDHHLLKAFL 67
           + R CLC+PTTHPGSFRCS HRRL +   KT                      +L K  L
Sbjct: 67  TKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLAL 126

Query: 68  M--------------------QIVKPSSHDLQRRGSFEPKPSRF 92
           M                     + KPSS    RR  F P+ SRF
Sbjct: 127 MNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSRF 170

BLAST of Csa7G432210 vs. TAIR10
Match: AT1G67910.1 (AT1G67910.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06
Identity = 24/55 (43.64%), Postives = 29/55 (52.73%), Query Frame = 1

Query: 1  MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHK---------TPPLPPPSP 47
          +  +T+ +   CLC+PTTHPGSFRC +HR LS    K         +PP P  SP
Sbjct: 33 LSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQRTKSIEAASLLDSPPKPADSP 87

BLAST of Csa7G432210 vs. TAIR10
Match: AT3G13227.1 (AT3G13227.1 serine-rich protein-related)

HSP 1 Score: 47.4 bits (111), Expect = 6.5e-06
Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 1

Query: 3  NKTASSSRLCLCAPTTHPGSFRCSLHRR 31
          +K++S  + CLCAPTTHPGSFRC  HRR
Sbjct: 56 SKSSSVRQNCLCAPTTHPGSFRCRYHRR 83

BLAST of Csa7G432210 vs. NCBI nr
Match: gi|700190007|gb|KGN45240.1| (hypothetical protein Csa_7G432210 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 6.0e-54
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 1

Query: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH 60
           MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH 60

Query: 61  HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 106
           HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS
Sbjct: 61  HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 105

BLAST of Csa7G432210 vs. NCBI nr
Match: gi|659122451|ref|XP_008461151.1| (PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo])

HSP 1 Score: 186.0 bits (471), Expect = 3.3e-44
Identity = 92/106 (86.79%), Postives = 97/106 (91.51%), Query Frame = 1

Query: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTP-PLPPPSPRGSQSKAAATTTD 60
           MPNKTASSSRLCLCAPTTHPGSFRCSLHRR SNSSHKTP PLPPP   GSQSKAA TTTD
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPP--HGSQSKAATTTTD 60

Query: 61  HHLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 106
           H+ LKAFLMQIVKPSSH LQRRG+F+PKPSRFC++VSA DPRLAVS
Sbjct: 61  HYFLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

BLAST of Csa7G432210 vs. NCBI nr
Match: gi|1009182309|ref|XP_015872641.1| (PREDICTED: uncharacterized protein LOC107409728 [Ziziphus jujuba])

HSP 1 Score: 102.4 bits (254), Expect = 4.8e-19
Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 1

Query: 6  ASSSRLCLCAPTTHPGSFRCSLHR--RLSNSSHKTPPLPPPSPRGSQSKAAATTTDHHLL 65
          +SSSR CLC+PT HPGSFRCSLHR  R + ++  T  +    P+         T+  +LL
Sbjct: 7  SSSSRTCLCSPTNHPGSFRCSLHRAQRRALAARSTVVVNSAKPQSKTVMMMMATSKINLL 66

Query: 66 KAFLMQIVKPSSHDLQRRGSFEPKPSRFC 93
          KAFLMQI+KPSSHDLQRR SF+P+P+RFC
Sbjct: 67 KAFLMQIIKPSSHDLQRRRSFQPRPTRFC 95

BLAST of Csa7G432210 vs. NCBI nr
Match: gi|590615847|ref|XP_007023339.1| (Uncharacterized protein TCM_027325 [Theobroma cacao])

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-18
Identity = 52/98 (53.06%), Postives = 68/98 (69.39%), Query Frame = 1

Query: 7   SSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAA-----TTTDHH 66
           SS+R CLC+PTTHPGSFRCS HR    +S K+   P  +    +SKAA      T +   
Sbjct: 10  SSARTCLCSPTTHPGSFRCSFHRSFGKASTKSAAAPHANR--VESKAATMMMMTTASKAC 69

Query: 67  LLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASD 100
           L+KAFLMQI+KPSSHDLQRR +F+ KP+RFC + S+++
Sbjct: 70  LIKAFLMQIIKPSSHDLQRRRNFQRKPTRFCPLNSSAN 105

BLAST of Csa7G432210 vs. NCBI nr
Match: gi|1000942539|ref|XP_015582253.1| (PREDICTED: uncharacterized protein LOC8286598 [Ricinus communis])

HSP 1 Score: 96.3 bits (238), Expect = 3.5e-17
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 1

Query: 5   TASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDHHLLK 64
           T   +R CLC+PTTHPGSFRCSLHR  +  S+++      SPR  +    A       LK
Sbjct: 14  THQQARTCLCSPTTHPGSFRCSLHRNFNRFSNRSRTAHV-SPRKWELSVIAKANS---LK 73

Query: 65  AFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 106
           AFL+QI+KPSSHDLQRR +F+P+P+RFC +++A+   +AVS
Sbjct: 74  AFLLQIIKPSSHDLQRRRNFQPRPTRFC-LMNANRDGVAVS 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K698_CUCSA4.2e-54100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432210 PE=4 SV=1[more]
A0A061G8R4_THECC1.7e-1853.06Uncharacterized protein OS=Theobroma cacao GN=TCM_027325 PE=4 SV=1[more]
B9SZN1_RICCO2.4e-1750.50Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1372180 PE=4 SV=1[more]
A0A151SWE2_CAJCA2.4e-1745.71Uncharacterized protein OS=Cajanus cajan GN=KK1_014536 PE=4 SV=1[more]
A0A164U5H0_DAUCA5.4e-1744.92Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_025532 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G25280.15.0e-1436.89 serine-rich protein-related[more]
AT5G11090.11.4e-1334.62 serine-rich protein-related[more]
AT5G20370.14.8e-0934.62 serine-rich protein-related[more]
AT1G67910.11.0e-0643.64 unknown protein[more]
AT3G13227.16.5e-0667.86 serine-rich protein-related[more]
Match NameE-valueIdentityDescription
gi|700190007|gb|KGN45240.1|6.0e-54100.00hypothetical protein Csa_7G432210 [Cucumis sativus][more]
gi|659122451|ref|XP_008461151.1|3.3e-4486.79PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo][more]
gi|1009182309|ref|XP_015872641.1|4.8e-1956.18PREDICTED: uncharacterized protein LOC107409728 [Ziziphus jujuba][more]
gi|590615847|ref|XP_007023339.1|2.4e-1853.06Uncharacterized protein TCM_027325 [Theobroma cacao][more]
gi|1000942539|ref|XP_015582253.1|3.5e-1750.50PREDICTED: uncharacterized protein LOC8286598 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G432210.1Csa7G432210.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33132FAMILY NOT NAMEDcoord: 1..92
score: 9.0
NoneNo IPR availablePANTHERPTHR33132:SF5SUBFAMILY NOT NAMEDcoord: 1..92
score: 9.0

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa7G432210Csa4G652810Cucumber (Chinese Long) v2cucuB150