Carg03937 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg03937
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	serine-rich protein-related
Location	Cucurbita_argyrosperma_scaffold_011 : 882698 .. 883192 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACGAAACAAGCGGCCCTGTTCTCCGGCCACTTCCCGCCGGCGGCGGCGGCGGATTTCACTCCACGTTCTTCCACAACCACCGTCGATCTGCTTCTTCTCGAGTGAACATCTCTTCCTCTCCCATGTTTCACTCTGTTCGATTTTCCCTAGGTCACCGGTCCATCGCCGTCTCAAATCGGAACTCGCCGGTTTCTCAGCCGTGTATGTGTTCGCCGACGAACCACCCCGGCTCCTTCCGGTGCAGTCTGCATAAAAATGGCGGCAGTAGCCGACACCATCAGATGTTGTCGGTGTATTCGTCGAGGCGTTTGAATATGCGGCGGTCTGCAATGACGAACTCGCTTGTGAGAATCGGTGGCGTTGAAGGAGACTTGGTCAACCGAGCGTTGACTGCTTTGATTCGACCTTCTTCGCACCAACAGCGACGGAGAGCCAATTTTCAGTCGCGCCCCAGCCGGCTTTCGGCCATGTCCGAAAATCATAATTGA

mRNA sequence

ATGAACAACGAAACAAGCGGCCCTGTTCTCCGGCCACTTCCCGCCGGCGGCGGCGGCGGATTTCACTCCACGTTCTTCCACAACCACCGTCGATCTGCTTCTTCTCGAGTGAACATCTCTTCCTCTCCCATGTTTCACTCTGTTCGATTTTCCCTAGGTCACCGGTCCATCGCCGTCTCAAATCGGAACTCGCCGGTTTCTCAGCCGTGTATGTGTTCGCCGACGAACCACCCCGGCTCCTTCCGGTGCAGTCTGCATAAAAATGGCGGCAGTAGCCGACACCATCAGATGTTGTCGGTGTATTCGTCGAGGCGTTTGAATATGCGGCGGTCTGCAATGACGAACTCGCTTGTGAGAATCGGTGGCGTTGAAGGAGACTTGGTCAACCGAGCGTTGACTGCTTTGATTCGACCTTCTTCGCACCAACAGCGACGGAGAGCCAATTTTCAGTCGCGCCCCAGCCGGCTTTCGGCCATGTCCGAAAATCATAATTGA

Coding sequence (CDS)

ATGAACAACGAAACAAGCGGCCCTGTTCTCCGGCCACTTCCCGCCGGCGGCGGCGGCGGATTTCACTCCACGTTCTTCCACAACCACCGTCGATCTGCTTCTTCTCGAGTGAACATCTCTTCCTCTCCCATGTTTCACTCTGTTCGATTTTCCCTAGGTCACCGGTCCATCGCCGTCTCAAATCGGAACTCGCCGGTTTCTCAGCCGTGTATGTGTTCGCCGACGAACCACCCCGGCTCCTTCCGGTGCAGTCTGCATAAAAATGGCGGCAGTAGCCGACACCATCAGATGTTGTCGGTGTATTCGTCGAGGCGTTTGAATATGCGGCGGTCTGCAATGACGAACTCGCTTGTGAGAATCGGTGGCGTTGAAGGAGACTTGGTCAACCGAGCGTTGACTGCTTTGATTCGACCTTCTTCGCACCAACAGCGACGGAGAGCCAATTTTCAGTCGCGCCCCAGCCGGCTTTCGGCCATGTCCGAAAATCATAATTGA

Protein sequence

MNNETSGPVLRPLPAGGGGGFHSTFFHNHRRSASSRVNISSSPMFHSVRFSLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN

Homology

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: XP_022951456.1 (uncharacterized protein LOC111454267 [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70
Identity = 161/164 (98.17%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGXXXXXXXXXXXXXXXXXSSRVNISSSPMFHSVRFSLGHRSIAVS 60
           MNNETSGPVLRPLPAGXXXXXXXXXXXXXXXXXSSRVNISSSPM HSVRFSLGHRSIAVS
Sbjct: 1   MNNETSGPVLRPLPAGXXXXXXXXXXXXXXXXXSSRVNISSSPMSHSVRFSLGHRSIAVS 60

Query: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRI 120
           NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQ LS YSSRRLNMRRSAMTNSLVRI
Sbjct: 61  NRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQTLSAYSSRRLNMRRSAMTNSLVRI 120

Query: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 165
           GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN
Sbjct: 121 GGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSENHN 164

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: XP_022962284.1 (uncharacterized protein LOC111462780 [Cucurbita moschata])

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 112/188 (59.57%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPA------------------GXXXXXXXXXXXXXXXXXSSRVNISSS 60
           M  ETSGPVLRPLPA                  G                  +RVNISS 
Sbjct: 1   MKKETSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSG 60

Query: 61  PMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSFRCSLHKNGGSSR 120
           P+  SVRFS+ H      RSIA+SNRNSPVSQP   C CSPT HPGSFRCSLH+N G+  
Sbjct: 61  PLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRCSLHRNSGNGG 120

Query: 121 HHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRP 162
           HHQ    YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RP
Sbjct: 121 HHQ---TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRP 180

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: XP_023547160.1 (uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 112/187 (59.89%), Postives = 120/187 (64.17%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPA------------------GXXXXXXXXXXXXXXXXXSSRVNISSS 60
           M  ETSGPVLRPLPA                  G                  +RVNISS 
Sbjct: 1   MKKETSGPVLRPLPAAGRFHSPIASPFAASTSFGFSSTSSSFFHNHERSASPTRVNISSG 60

Query: 61  PMFHSVRFSLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSFRCSLHKNGGSSR 120
           P+  SVRFS+ H      RSIA+SNRNSPVSQP   C CSPT HPGSFRCSLH+N G+  
Sbjct: 61  PLSRSVRFSIDHRSGSPSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRCSLHRNSGNGG 120

Query: 121 HHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRP 161
           HHQ    YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RP
Sbjct: 121 HHQ---TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRP 180

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: XP_022996630.1 (uncharacterized protein LOC111491813 [Cucurbita maxima])

HSP 1 Score: 183.7 bits (465), Expect = 5.0e-43
Identity = 110/180 (61.11%), Postives = 119/180 (66.11%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPA----------GXXXXXXXXXXXXXXXXXSSRVNISSSPMFHSVRF 60
           M  ETSGPVLRPLPA          G                  +RVNISSSP+  SVRF
Sbjct: 1   MKKETSGPVLRPLPAAGRFAASKSFGFSSTSSSFFHNHERNASPTRVNISSSPLSRSVRF 60

Query: 61  SLGH------RSIAVSNRNSPVSQP---CMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVY 120
           S+ H      RSI +SNRNSPVS P   C CSPT HPGSFRCSLH+N G+  HHQ    Y
Sbjct: 61  SIDHRSGSPSRSITLSNRNSPVSLPKKTCTCSPTTHPGSFRCSLHRNSGNGGHHQ---TY 120

Query: 121 SSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRANFQSRPSRLSAMSE 162
           SS  LNMRRSAM NSLVRIGGVEGD V RALTALIRPSSHQ RRRANF+ RPSRLS +S+
Sbjct: 121 SSSGLNMRRSAMKNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSK 177

[Close]

BLAST of Carg03937 vs. NCBI nr
Match: XP_008445241.1 (PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis melo])

HSP 1 Score: 179.5 bits (454), Expect = 9.3e-42
Identity = 111/197 (56.35%), Postives = 122/197 (61.93%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGXXXXXXXXXXXXXXXXXS-------------------------- 60
           M  ETSGPVLRP PAG                 S                          
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSXXXXXXXXXXXXXXXXX 60

Query: 61  ---SRVNISSSPMFHSVRFSLGHRSIA--VSNRNSPVS---QPCMCSPTNHPGSFRCSLH 120
              +RVNISS+P+  SVRFS+GHRS +  +SNRNSPVS   +PCMCSPT HPGSFRCSLH
Sbjct: 61  XSPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120

Query: 121 KNGGSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQR 162
           K  GS   +H    S YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ R
Sbjct: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180

[Close]

BLAST of Carg03937 vs. TAIR10
Match: AT5G11090.1 (serine-rich protein-related)

HSP 1 Score: 135.6 bits (340), Expect = 2.8e-32
Identity = 79/140 (56.43%), Postives = 99/140 (70.71%), Query Frame = 0


Query: 35  SRVNI-SSSPMFHSVRFSLGHRSIAVSNR------------NSPVSQPCMCSPTNHPGSF 94
           +RVN+ ++ PM  S R+SL  RSI+ +N+            N  +S+ CMCSPT HPGSF
Sbjct: 75  TRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKISRRCMCSPTTHPGSF 134

Query: 95  RCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSH 154
           RCSLHKN  ++ H Q  + Y++  LNMRRSAMTNSLVRIGGVEG+ V RALT LIRPSSH
Sbjct: 135 RCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSH 194

Query: 155 QQRRRANFQSRPSRLSAMSE 162
             +RRA +Q RPSRLS M++
Sbjct: 195 HLKRRAAYQPRPSRLSIMAK 213

[Close]

BLAST of Carg03937 vs. TAIR10
Match: AT5G25280.1 (serine-rich protein-related)

HSP 1 Score: 127.9 bits (320), Expect = 5.8e-30
Identity = 78/142 (54.93%), Postives = 101/142 (71.13%), Query Frame = 0


Query: 35  SRVNI-SSSPMFHSVRFSLGHRSIAVSNRNSPVS--------------QPCMCSPTNHPG 94
           +RVN+ +S+PM  S R+S+ +RSI+  NR+  VS              + CMCSPT HPG
Sbjct: 77  TRVNLFTSAPMTQSFRYSIDNRSIS-PNRSIAVSSNKPSNHHKIPDSRRRCMCSPTTHPG 136

Query: 95  SFRCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPS 154
           SFRCSLHKN  ++ H Q  + Y++  LNMRRSAMTNSLVRIGGVEG+ V RALT LIRPS
Sbjct: 137 SFRCSLHKN-VANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPS 196

Query: 155 SHQQRRRANFQSRPSRLSAMSE 162
           SHQ +RR+ ++ R SRL++MS+
Sbjct: 197 SHQLKRRSAYEPRRSRLASMSK 216

[Close]

BLAST of Carg03937 vs. TAIR10
Match: AT5G20370.1 (serine-rich protein-related)

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-11
Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 0


Query: 51  SLGHRSIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKNGGSSRHHQMLSVYSSRR----- 110
           S+   S+   + N    + C+CSPT HPGSFRCS H+     +   + S    R      
Sbjct: 52  SIPKPSVVTVSSNHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDN 111

Query: 111 -------LNMRRSAMTNSLVRIGGVEGDLVNRALTA-LIRPSSHQQRRRANFQSRPSR 156
                  LN+R+ A+ NSL +IG VE +   R+L A L +PSS    RR  F+ R SR
Sbjct: 112 TIRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of Carg03937 vs. TAIR10
Match: AT1G67910.1 (unknown protein)

HSP 1 Score: 40.8 bits (94), Expect = 9.4e-04
Identity = 16/33 (48.48%), Postives = 22/33 (66.67%), Query Frame = 0


Query: 56 SIAVSNRNSPVSQPCMCSPTNHPGSFRCSLHKN 89
          S  +S + S     C+CSPT HPGSFRC +H++
Sbjct: 30 SRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRS 62

[Close]

BLAST of Carg03937 vs. TrEMBL
Match: tr|A0A1S3BC71|A0A1S3BC71_CUCME (nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC103488327 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 6.2e-42
Identity = 111/197 (56.35%), Postives = 122/197 (61.93%), Query Frame = 0


Query: 1   MNNETSGPVLRPLPAGXXXXXXXXXXXXXXXXXS-------------------------- 60
           M  ETSGPVLRP PAG                 S                          
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSXXXXXXXXXXXXXXXXX 60

Query: 61  ---SRVNISSSPMFHSVRFSLGHRSIA--VSNRNSPVS---QPCMCSPTNHPGSFRCSLH 120
              +RVNISS+P+  SVRFS+GHRS +  +SNRNSPVS   +PCMCSPT HPGSFRCSLH
Sbjct: 61  XSPTRVNISSTPLSRSVRFSIGHRSGSPKLSNRNSPVSLPKKPCMCSPTTHPGSFRCSLH 120

Query: 121 KNGGSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQR 162
           K  GS   +H    S YSS  LNMRRSAMTNSLVRIGGVEGD V RALTALIRPSSHQ R
Sbjct: 121 KKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLR 180

[Close]

BLAST of Carg03937 vs. TrEMBL
Match: tr|A0A0A0LME8|A0A0A0LME8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382420 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.9e-40
Identity = 96/134 (71.64%), Postives = 107/134 (79.85%), Query Frame = 0


Query: 35  SRVNISSSPMFHSVRFSLGHR--SIAVSNRNSPVS---QPCMCSPTNHPGSFRCSLHKNG 94
           +RVNISS+P+ HSVRFS+GHR  S  +SNRNSPVS   +PC CSPT HPGSFRCSLHK  
Sbjct: 66  TRVNISSTPLSHSVRFSIGHRTGSPTLSNRNSPVSLPKKPCTCSPTTHPGSFRCSLHKKS 125

Query: 95  GSS--RHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQRRRA 154
           GS   +H    S YSS  LNMRRSAMTNSLVRIGGVEG+ V RALTALIRPSSHQ RRRA
Sbjct: 126 GSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQLRRRA 185

Query: 155 NFQSRPSRLSAMSE 162
           NF+ +PSRLS MS+
Sbjct: 186 NFRPQPSRLSVMSK 199

[Close]

BLAST of Carg03937 vs. TrEMBL
Match: tr|A0A2P6PXN0|A0A2P6PXN0_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297351 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.2e-34
Identity = 88/138 (63.77%), Postives = 104/138 (75.36%), Query Frame = 0


Query: 35  SRVNI-SSSPMFHSVRFSLGHRSIA------VSNRNSPVS---QPCMCSPTNHPGSFRCS 94
           +RVN+ +SS +  +VRFS+ HRSI+       S +N P++   + CMCSPTNHPGSFRCS
Sbjct: 85  TRVNLYTSSALSPAVRFSIEHRSISPNRSITASKKNGPIAAARKTCMCSPTNHPGSFRCS 144

Query: 95  LHKNGGSSRHH-QMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQ 154
           LHKN GS+ HH    + Y + RLNMRRSAMTNSLVRI GVEG+ V RALTALIRPSSHQQ
Sbjct: 145 LHKNQGSANHHSHNQTPYPNNRLNMRRSAMTNSLVRISGVEGEWVKRALTALIRPSSHQQ 204

Query: 155 RRRANFQSRPSRLSAMSE 162
           RRRA FQ R SRLS MS+
Sbjct: 205 RRRAGFQPRQSRLSVMSK 222

[Close]

BLAST of Carg03937 vs. TrEMBL
Match: tr|M5Y5X7|M5Y5X7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G485100 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.8e-33
Identity = 89/139 (64.03%), Postives = 102/139 (73.38%), Query Frame = 0


Query: 35  SRVNI-SSSPMFHSVRFSLGHRSIA---------VSNRNSPVSQP---CMCSPTNHPGSF 94
           +RVN+ +SS    SVRFS+ HRSI+         VS +N P+S P   CMCSPT+HPGSF
Sbjct: 85  TRVNLYTSSAPSPSVRFSIDHRSISPNHSNRSITVSKKNGPISMPKKTCMCSPTSHPGSF 144

Query: 95  RCSLHKNGGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSH 154
           RCSLHKN G   +    + Y + RLNMRRSAMTNSLVRIGGVEG+ V RALTALIRP +H
Sbjct: 145 RCSLHKNIGGGHN---AAPYPTNRLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPCAH 204

Query: 155 QQRRRANFQSRPSRLSAMS 161
           QQRRRA FQ RPSRLSAMS
Sbjct: 205 QQRRRAGFQPRPSRLSAMS 220

[Close]

BLAST of Carg03937 vs. TrEMBL
Match: tr|A0A2P5EWD5|A0A2P5EWD5_9ROSA (Serine-rich protein-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_143720 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.8e-33
Identity = 91/138 (65.94%), Postives = 102/138 (73.91%), Query Frame = 0


Query: 35  SRVNI-SSSPMFHSVRFSLGH------RSIAVSNRNSPVS---QPCMCSPTNHPGSFRCS 94
           +RVN+ +SSP   SVRFS+ H      RSI+VS ++ P+S   + CMCSPT HPGSFRCS
Sbjct: 75  TRVNVYNSSPRSPSVRFSIDHRSISPNRSISVSKQSRPISLSKKTCMCSPTTHPGSFRCS 134

Query: 95  LHKN-GGSSRHHQMLSVYSSRRLNMRRSAMTNSLVRIGGVEGDLVNRALTALIRPSSHQQ 154
           LHKN  G   HH   S Y S RLNMRRSAMTNSLVRIGGVEG+ V RALTALIRPSSHQQ
Sbjct: 135 LHKNLNGGGNHH--TSSYPSNRLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPSSHQQ 194

Query: 155 RRRANFQSRPSRLSAMSE 162
           RRRA FQ   SRLS MS+
Sbjct: 195 RRRAGFQPSRSRLSVMSK 210

The following BLAST results are available for this feature:

BLAST of Carg03937 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951456.1	1.3e-70	98.17	uncharacterized protein LOC111454267 [Cucurbita moschata]	[more]
XP_022962284.1	1.3e-43	59.57	uncharacterized protein LOC111462780 [Cucurbita moschata]	[more]
XP_023547160.1	1.3e-43	59.89	uncharacterized protein LOC111806049 [Cucurbita pepo subsp. pepo]	[more]
XP_022996630.1	5.0e-43	61.11	uncharacterized protein LOC111491813 [Cucurbita maxima]	[more]
XP_008445241.1	9.3e-42	56.35	PREDICTED: nuclear transcription factor Y subunit gamma-like [Cucumis melo]	[more]

BLAST of Carg03937 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11090.1	2.8e-32	56.43	serine-rich protein-related	[more]
AT5G25280.1	5.8e-30	54.93	serine-rich protein-related	[more]
AT5G20370.1	2.7e-11	36.44	serine-rich protein-related	[more]
AT1G67910.1	9.4e-04	48.48	unknown protein	[more]

BLAST of Carg03937 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg03937 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BC71\|A0A1S3BC71_CUCME	6.2e-42	56.35	nuclear transcription factor Y subunit gamma-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A0A0LME8\|A0A0A0LME8_CUCSA	9.9e-40	71.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382420 PE=4 SV=1	[more]
tr\|A0A2P6PXN0\|A0A2P6PXN0_ROSCH	6.2e-34	63.77	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0297351 PE=4...	[more]
tr\|M5Y5X7\|M5Y5X7_PRUPE	1.8e-33	64.03	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G485100 PE=4 SV=1	[more]
tr\|A0A2P5EWD5\|A0A2P5EWD5_9ROSA	1.8e-33	65.94	Serine-rich protein-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_1437...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03937-RA	Carg03937-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..164
None	No IPR available	PANTHER	PTHR33132:SF12	SUBFAMILY NOT NAMED	coord: 22..162
None	No IPR available	PANTHER	PTHR33132	FAMILY NOT NAMED	coord: 22..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg03937	Cla022339	Watermelon (97103) v1	carwmB0978
Carg03937	Csa2G382420	Cucumber (Chinese Long) v2	carcuB0987
Carg03937	MELO3C011275	Melon (DHL92) v3.5.1	carmeB0955
Carg03937	ClCG08G013480	Watermelon (Charleston Gray)	carwcgB0958
Carg03937	ClCG05G016650	Watermelon (Charleston Gray)	carwcgB0955
Carg03937	CSPI02G23680	Wild cucumber (PI 183967)	carcpiB1010
Carg03937	Cucsa.162580	Cucumber (Gy14) v1	carcgyB1091
Carg03937	CmaCh05G003710	Cucurbita maxima (Rimu)	carcmaB1357
Carg03937	CmoCh12G002980	Cucurbita moschata (Rifu)	carcmoB1310
Carg03937	CmoCh05G003740	Cucurbita moschata (Rifu)	carcmoB1319
Carg03937	Lsi08G012190	Bottle gourd (USVL1VR-Ls)	carlsiB898
Carg03937	Cp4.1LG12g07390	Cucurbita pepo (Zucchini)	carcpeB1356
Carg03937	Cp4.1LG11g03130	Cucurbita pepo (Zucchini)	carcpeB1352
Carg03937	MELO3C011275.2	Melon (DHL92) v3.6.1	carmedB0961
Carg03937	CsaV3_2G032230	Cucumber (Chinese Long) v3	carcucB1015
Carg03937	Cla97C05G097670	Watermelon (97103) v2	carwmbB1030
Carg03937	Cla97C08G156870	Watermelon (97103) v2	carwmbB1034
Carg03937	Cla97C09G165380	Watermelon (97103) v2	carwmbB1036
Carg03937	Bhi04G000011	Wax gourd	carwgoB1142
Carg03937	Bhi09G002435	Wax gourd	carwgoB1149

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg03937	Carg09343	Silver-seed gourd	carcarB168
Carg03937	Carg02864	Silver-seed gourd	carcarB558

The following block(s) are covering this gene:


Gene	Organism	Block
Carg03937	Watermelon (Charleston Gray)	carwcgB0957
Carg03937	Watermelon (Charleston Gray)	carwcgB0951
Carg03937	Watermelon (97103) v1	carwmB0980
Carg03937	Watermelon (97103) v2	carwmbB1033
Carg03937	Silver-seed gourd	carcarB239
Carg03937	Silver-seed gourd	carcarB572
Carg03937	Cucumber (Gy14) v2	carcgybB0960
Carg03937	Cucurbita maxima (Rimu)	carcmaB1349
Carg03937	Cucurbita maxima (Rimu)	carcmaB1353
Carg03937	Cucurbita moschata (Rifu)	carcmoB1313
Carg03937	Cucurbita moschata (Rifu)	carcmoB1315
Carg03937	Cucurbita pepo (Zucchini)	carcpeB1363
Carg03937	Cucurbita pepo (Zucchini)	carcpeB1364
Carg03937	Cucurbita pepo (Zucchini)	carcpeB1368
Carg03937	Bottle gourd (USVL1VR-Ls)	carlsiB893