CmoCh05G003740 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G003740
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Serine-rich protein
Location	Cmo_Chr05 : 1684119 .. 1684688 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGGAAACAAGCGGACCTGTTCTCCGGCCACTTCCCGCCGCCGGCCGATTTCACTCTCCGATCTCTTCTCCGTTCGCCGCGTCAACGAGCTTCGGATTCTCTTCCACTTCCTCATCCTTTTTTCACAACCGCGAGCGATCCGCTTCTCCTACTCGAGTCAACATTTCTTCCGGTCCCCTGTCTCGCTCGGTTCGATTTTCAATCGATCACCGGTCCGGTTCGACGAGTCGGTCCATCGCACTCTCCAACCGGAACTCGCCGGTTTCTCAACCGAAAAAGACGTGCACTTGTTCGCCAACGACTCACCCCGGTTCCTTCCGGTGCAGTCTGCATAGAAATTCAGGCAATGGCGGACACCATCAGACGTATTCATCGAGCGGGTTAAACATGCGGAGGTCTGCGATGACGAACTCGCTCGTGAGAATCGGCGGCGTTGAGGGAGACTGGGTGAAGCGAGCGTTGACTGCTTTGATACGACCTTCTTCACACCAGCTGAGACGGCGAGCCAATTTCCGGCCACGCCCCAGCCGTCTTTCGGTCGTGTCCAAGGCCGATGATCTGTAA

mRNA sequence

ATGAAGAAGGAAACAAGCGGACCTGTTCTCCGGCCACTTCCCGCCGCCGGCCGATTTCACTCTCCGATCTCTTCTCCGTTCGCCGCGTCAACGAGCTTCGGATTCTCTTCCACTTCCTCATCCTTTTTTCACAACCGCGAGCGATCCGCTTCTCCTACTCGAGTCAACATTTCTTCCGGTCCCCTGTCTCGCTCGGTTCGATTTTCAATCGATCACCGGTCCGGTTCGACGAGTCGGTCCATCGCACTCTCCAACCGGAACTCGCCGGTTTCTCAACCGAAAAAGACGTGCACTTGTTCGCCAACGACTCACCCCGGTTCCTTCCGGTGCAGTCTGCATAGAAATTCAGGCAATGGCGGACACCATCAGACGTATTCATCGAGCGGGTTAAACATGCGGAGGTCTGCGATGACGAACTCGCTCGTGAGAATCGGCGGCGTTGAGGGAGACTGGGTGAAGCGAGCGTTGACTGCTTTGATACGACCTTCTTCACACCAGCTGAGACGGCGAGCCAATTTCCGGCCACGCCCCAGCCGTCTTTCGGTCGTGTCCAAGGCCGATGATCTGTAA

Coding sequence (CDS)

ATGAAGAAGGAAACAAGCGGACCTGTTCTCCGGCCACTTCCCGCCGCCGGCCGATTTCACTCTCCGATCTCTTCTCCGTTCGCCGCGTCAACGAGCTTCGGATTCTCTTCCACTTCCTCATCCTTTTTTCACAACCGCGAGCGATCCGCTTCTCCTACTCGAGTCAACATTTCTTCCGGTCCCCTGTCTCGCTCGGTTCGATTTTCAATCGATCACCGGTCCGGTTCGACGAGTCGGTCCATCGCACTCTCCAACCGGAACTCGCCGGTTTCTCAACCGAAAAAGACGTGCACTTGTTCGCCAACGACTCACCCCGGTTCCTTCCGGTGCAGTCTGCATAGAAATTCAGGCAATGGCGGACACCATCAGACGTATTCATCGAGCGGGTTAAACATGCGGAGGTCTGCGATGACGAACTCGCTCGTGAGAATCGGCGGCGTTGAGGGAGACTGGGTGAAGCGAGCGTTGACTGCTTTGATACGACCTTCTTCACACCAGCTGAGACGGCGAGCCAATTTCCGGCCACGCCCCAGCCGTCTTTCGGTCGTGTCCAAGGCCGATGATCTGTAA

Homology

[Close]

BLAST of CmoCh05G003740 vs. TrEMBL
Match: A0A0A0LME8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382420 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.3e-68
Identity = 154/205 (75.12%), Postives = 162/205 (79.02%), Query Frame = 1


Query: 1   MKKETSGPVLRPLPAAGRFHSPISSP----FAASTSFGFSSTSSSFF---------HNRE 60
           MKKETSGPVLRP PA  RF S  SSP    FAAST+FGFSS SS F          HN  
Sbjct: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60

Query: 61  RSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGS 120
           RS SPTRVNISS PLS SVRFSI HR+GS +    LSNRNSPVS PKK CTCSPTTHPGS
Sbjct: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPT----LSNRNSPVSLPKKPCTCSPTTHPGS 120

Query: 121 FRCSLHRNSGNGGH-HQT----YSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRP 180
           FRCSLH+ SG+G H HQ     YSSSGLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRP
Sbjct: 121 FRCSLHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRP 180

Query: 181 SSHQLRRRANFRPRPSRLSVVSKAD 188
           SSHQLRRRANFRP+PSRLSV+SKAD
Sbjct: 181 SSHQLRRRANFRPQPSRLSVMSKAD 201

[Close]

BLAST of CmoCh05G003740 vs. TrEMBL
Match: W9RB29_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008522 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.2e-52
Identity = 128/206 (62.14%), Postives = 151/206 (73.30%), Query Frame = 1


Query: 2   KKETSGPVLRPLPAAGRFHSP--------ISSPFAASTSFGFSSTSSSFFHNRE------ 61
           +  +SGPVLR L   GRF+S          SS FA+STS  F S +S+FF ++E      
Sbjct: 10  RTRSSGPVLRSLSPCGRFYSQPSNSSISSSSSGFASSTSSSFYSKASTFFGHQEDHHYES 69

Query: 62  -RSASPTRVNIS-SGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHP 121
            R ASPTRVN+  S P S+SVRFSIDHRS S +RSI +S +  P+S  K+TC CSPTTHP
Sbjct: 70  HRPASPTRVNLCPSAPRSQSVRFSIDHRSISPNRSITVSKQR-PISMTKRTCMCSPTTHP 129

Query: 122 GSFRCSLHRNSGNGGHHQ--TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPS 181
           GSFRCSLH+N  +GG H   +Y S+ LNMRRSAMTNSLVRIGGVEG+WVKRALTALIRPS
Sbjct: 130 GSFRCSLHKNVSSGGSHNAASYPSNRLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPS 189

Query: 182 SHQLRRRANFRPRPSRLSVVSKADDL 190
           SHQ RRR+ F+P  SRLSV+SKADDL
Sbjct: 190 SHQQRRRSAFQPTRSRLSVMSKADDL 214

[Close]

BLAST of CmoCh05G003740 vs. TrEMBL
Match: V7AWI4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G090900g PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-51
Identity = 131/214 (61.21%), Postives = 151/214 (70.56%), Query Frame = 1


Query: 2   KKETSGPVLRPLPAAGRFHS------PISSP---FAASTSFGFSSTSSSFF--------- 61
           + ++SGPVLR L  + RF S      P SSP   FA+ST   FSS SS+FF         
Sbjct: 7   RTKSSGPVLRSLSPSTRFCSYTTSKTPFSSPSSAFASSTGSTFSSPSSTFFTNTHHHHPH 66

Query: 62  ---HNRERSASPTRVNI-SSGPLSRSVRFSIDHRSGSTSRSIA---LSNRNSPVSQPKKT 121
              H   RSASPTRVN+ S  P S +VRFSID RS S +RSI+   ++  N P+S  KKT
Sbjct: 67  AHHHTHHRSASPTRVNLYSPAPPSSAVRFSIDPRSISPNRSISNQIITKNNRPISAHKKT 126

Query: 122 CTCSPTTHPGSFRCSLHRNSGNGGHH-QTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRA 181
           C CSPT+HPGSFRCSLH+N+GN  HH  +Y S+ LNMRRSAM NSLVRIGGVEG+WVKRA
Sbjct: 127 CMCSPTSHPGSFRCSLHKNAGNNHHHADSYPSNRLNMRRSAMKNSLVRIGGVEGEWVKRA 186

Query: 182 LTALIRPSSHQLRRRANFRPRPSRLSVVSKADDL 190
           LTALIRPSSHQ RRRA F PRPSRLSV+SKA DL
Sbjct: 187 LTALIRPSSHQQRRRAAFEPRPSRLSVMSKAQDL 220

[Close]

BLAST of CmoCh05G003740 vs. TrEMBL
Match: I1JUA4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-51
Identity = 130/212 (61.32%), Postives = 149/212 (70.28%), Query Frame = 1


Query: 2   KKETSGPVLRPLPAAGRFHS------PISSP---FAASTSFGFSSTS---------SSFF 61
           + ++SGPVLR L  + RF S      P SSP   FA+STS GFSS++         S   
Sbjct: 7   RTKSSGPVLRSLSPSSRFCSYTTSKTPFSSPSSAFASSTSSGFSSSTFFNQPRQHHSQSH 66

Query: 62  HNRERSASPTRVNI-SSGPLSRSVRFSIDHRSGSTSRSIA----LSNRNSPVSQPKKTCT 121
           H+  R+ASPTRVN+ S  PLS  VRFSID RS S +RSI+     +  N P+S  KKTC 
Sbjct: 67  HSHHRAASPTRVNLYSPAPLSSGVRFSIDPRSISPNRSISNQIITTKNNRPISGQKKTCM 126

Query: 122 CSPTTHPGSFRCSLHRNSGNGGHHQ-TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALT 181
           CSPT HPGSFRCSLH+N GN  HH  +Y S+ LNMRRSAM NSLVRIGGVEG+WVKRALT
Sbjct: 127 CSPTMHPGSFRCSLHKNIGNNNHHSDSYPSNRLNMRRSAMKNSLVRIGGVEGEWVKRALT 186

Query: 182 ALIRPSSHQLRRRANFRPRPSRLSVVSKADDL 190
           ALIRPSSHQ RRRA F PRPSRLSV+SKA DL
Sbjct: 187 ALIRPSSHQQRRRAGFEPRPSRLSVMSKAQDL 218

[Close]

BLAST of CmoCh05G003740 vs. TrEMBL
Match: M5Y5X7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011080mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.0e-51
Identity = 127/213 (59.62%), Postives = 151/213 (70.89%), Query Frame = 1


Query: 2   KKETSGPVLRPLPAAGRFH-------SPISSPFAASTSFGFSSTSSSFF----------- 61
           +  +SGPVLR L  +GRF+       S  +S FA+STS  FSS +S+FF           
Sbjct: 12  RTRSSGPVLRSLSPSGRFYTASNASISSSASGFASSTSSSFSSPASAFFSHHKDHHYYNQ 71

Query: 62  ----HNRERSASPTRVNI--SSGPLSRSVRFSIDHRSGS---TSRSIALSNRNSPVSQPK 121
               H+  RSASPTRVN+  SS P S SVRFSIDHRS S   ++RSI +S +N P+S PK
Sbjct: 72  QINHHHHHRSASPTRVNLYTSSAP-SPSVRFSIDHRSISPNHSNRSITVSKKNGPISMPK 131

Query: 122 KTCTCSPTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKR 181
           KTC CSPT+HPGSFRCSLH+N G G +   Y ++ LNMRRSAMTNSLVRIGGVEG+WVKR
Sbjct: 132 KTCMCSPTSHPGSFRCSLHKNIGGGHNAAPYPTNRLNMRRSAMTNSLVRIGGVEGEWVKR 191

Query: 182 ALTALIRPSSHQLRRRANFRPRPSRLSVVSKAD 188
           ALTALIRP +HQ RRRA F+PRPSRLS +S AD
Sbjct: 192 ALTALIRPCAHQQRRRAGFQPRPSRLSAMSTAD 223

[Close]

BLAST of CmoCh05G003740 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-48
Identity = 116/210 (55.24%), Postives = 150/210 (71.43%), Query Frame = 1


Query: 2   KKETSGPVLRPLPAAGRF--------HSPISSPFAASTSFGFSSTSSSFF---------H 61
           + +++GPVLR    +GRF         S  SS FA+STS  FSS SS+FF         H
Sbjct: 7   RTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHHESNH 66

Query: 62  NRERSASPTRVNI-SSGPLSRSVRFSIDHRSGS-TSRSIALSNRNSPVSQPK--KTCTCS 121
           +  RSASPTRVN+ ++ P+S+S R+S+D RS S T++SI++S    P    K  + C CS
Sbjct: 67  SHHRSASPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKISRRCMCS 126

Query: 122 PTTHPGSFRCSLHRNSGN--GGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTA 181
           PTTHPGSFRCSLH+N  N  G    +Y+++GLNMRRSAMTNSLVRIGGVEG+WV+RALT 
Sbjct: 127 PTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTT 186

Query: 182 LIRPSSHQLRRRANFRPRPSRLSVVSKADD 189
           LIRPSSH L+RRA ++PRPSRLS+++KAD+
Sbjct: 187 LIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of CmoCh05G003740 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related)

HSP 1 Score: 187.2 bits (474), Expect = 9.4e-48
Identity = 110/184 (59.78%), Postives = 141/184 (76.63%), Query Frame = 1


Query: 21  SPISSPFAASTSFGFSSTSSSFF-------HNRERSASPTRVNI-SSGPLSRSVRFSIDH 80
           SP SS FA+STS  FSS S++FF       H++ RSASPTRVN+ +S P+++S R+SID+
Sbjct: 38  SPSSSGFASSTSSSFSSPSTAFFSSHNQNNHHQHRSASPTRVNLFTSAPMTQSFRYSIDN 97

Query: 81  RSGSTSRSIALSNRNSP-----VSQPKKTCTCSPTTHPGSFRCSLHRNSGN--GGHHQTY 140
           RS S +RSIA+S+ N P     +   ++ C CSPTTHPGSFRCSLH+N  N  G    +Y
Sbjct: 98  RSISPNRSIAVSS-NKPSNHHKIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASY 157

Query: 141 SSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSSHQLRRRANFRPRPSRLSVVSK 190
           +++GLNMRRSAMTNSLVRIGGVEG+WV+RALT LIRPSSHQL+RR+ + PR SRL+ +SK
Sbjct: 158 TTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSK 217

[Close]

BLAST of CmoCh05G003740 vs. TAIR10
Match: AT5G20370.1 (AT5G20370.1 serine-rich protein-related)

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-15
Identity = 65/191 (34.03%), Postives = 88/191 (46.07%), Query Frame = 1


Query: 5   TSGPVLRPLPAAGRFHSPISSPFAASTSFGFSSTSSSFFHNRERSASPTRVNISSGPLSR 64
           +S  VLRPL ++ R H+                  +   H+R+RS SP   N++      
Sbjct: 7   SSRSVLRPLSSSQRLHN------------------NHHHHHRQRSPSPCNKNLN------ 66

Query: 65  SVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFRCSLHR---------- 124
            +R            S+   + N    Q K+ C CSPTTHPGSFRCS HR          
Sbjct: 67  -LRLKFYSPGSIPKPSVVTVSSNH---QTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTL 126

Query: 125 -----NSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTA-LIRPSSHQLR 180
                   N G +    + GLN+R+ A+ NSL +IG VE +  +R+L A L +PSS    
Sbjct: 127 ASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSH 169

[Close]

BLAST of CmoCh05G003740 vs. NCBI nr
Match: gi|659088936|ref|XP_008445241.1| (PREDICTED: uncharacterized protein LOC103488327 [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 1.8e-69
Identity = 156/203 (76.85%), Postives = 165/203 (81.28%), Query Frame = 1


Query: 1   MKKETSGPVLRPLPAAGRFHS----PISSPFAASTSFGFSSTSSSFF-------HNRERS 60
           MKKETSGPVLRP PA GRF S    P +SPFAAST+FGFSS SS+F        HN  RS
Sbjct: 1   MKKETSGPVLRPFPAGGRFQSQFSSPGTSPFAASTNFGFSSGSSTFLQNHDDHHHNHHRS 60

Query: 61  ASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGSFR 120
           ASPTRVNISS PLSRSVRFSI HRSGS      LSNRNSPVS PKK C CSPTTHPGSFR
Sbjct: 61  ASPTRVNISSTPLSRSVRFSIGHRSGSPK----LSNRNSPVSLPKKPCMCSPTTHPGSFR 120

Query: 121 CSLHRNSGNGGH-HQT----YSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS 180
           CSLH+ SG+G H HQ     YSS+GLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS
Sbjct: 121 CSLHKKSGSGIHQHQASSSAYSSTGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPSS 180

Query: 181 HQLRRRANFRPRPSRLSVVSKAD 188
           HQLRRRANFRP+PSRLSV+SKA+
Sbjct: 181 HQLRRRANFRPQPSRLSVMSKAE 199

[Close]

BLAST of CmoCh05G003740 vs. NCBI nr
Match: gi|449441894|ref|XP_004138717.1| (PREDICTED: uncharacterized protein LOC101214709 [Cucumis sativus])

HSP 1 Score: 265.4 bits (677), Expect = 7.7e-68
Identity = 154/205 (75.12%), Postives = 162/205 (79.02%), Query Frame = 1


Query: 1   MKKETSGPVLRPLPAAGRFHSPISSP----FAASTSFGFSSTSSSFF---------HNRE 60
           MKKETSGPVLRP PA  RF S  SSP    FAAST+FGFSS SS F          HN  
Sbjct: 1   MKKETSGPVLRPFPAGARFQSQFSSPGISSFAASTNFGFSSGSSIFLQNHDHDDHHHNHH 60

Query: 61  RSASPTRVNISSGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHPGS 120
           RS SPTRVNISS PLS SVRFSI HR+GS +    LSNRNSPVS PKK CTCSPTTHPGS
Sbjct: 61  RSVSPTRVNISSTPLSHSVRFSIGHRTGSPT----LSNRNSPVSLPKKPCTCSPTTHPGS 120

Query: 121 FRCSLHRNSGNGGH-HQT----YSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRP 180
           FRCSLH+ SG+G H HQ     YSSSGLNMRRSAMTNSLVRIGGVEG+WVKRALTALIRP
Sbjct: 121 FRCSLHKKSGSGIHQHQASSSAYSSSGLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRP 180

Query: 181 SSHQLRRRANFRPRPSRLSVVSKAD 188
           SSHQLRRRANFRP+PSRLSV+SKAD
Sbjct: 181 SSHQLRRRANFRPQPSRLSVMSKAD 201

[Close]

BLAST of CmoCh05G003740 vs. NCBI nr
Match: gi|1009136986|ref|XP_015885815.1| (PREDICTED: putative protein TPRXL [Ziziphus jujuba])

HSP 1 Score: 220.7 bits (561), Expect = 2.2e-54
Identity = 130/208 (62.50%), Postives = 151/208 (72.60%), Query Frame = 1


Query: 2   KKETSGPVLRPLPAAGRFHS--------PISSPFAASTSFGFSSTSSSFFHNRE------ 61
           +  +SGPVLR L  +GRF+S          SS FA+STS  FS+ +SSFF+N        
Sbjct: 9   RARSSGPVLRSLSPSGRFYSGNSNRSLSSSSSAFASSTSSSFSTPTSSFFNNHHHDHDNH 68

Query: 62  --RSASPTRVNIS-SGPLSRS-VRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTT 121
             R  SPTRVN+  S PLS S VRFSIDHRS S +RSI +S  + P+S PKK C CSPTT
Sbjct: 69  LHRPGSPTRVNLCPSAPLSSSSVRFSIDHRSISPNRSITVSKHSGPISMPKKNCMCSPTT 128

Query: 122 HPGSFRCSLHRNSGNGGHHQT--YSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIR 181
           HPGSFRCSLH+N G  G H    Y S+ LNMRRSAMTNSLVRIGGVEG+WVKRALTALIR
Sbjct: 129 HPGSFRCSLHKNVGGSGSHSATPYPSTRLNMRRSAMTNSLVRIGGVEGEWVKRALTALIR 188

Query: 182 PSSHQLRRRANFRPRPSRLSVVSKADDL 190
           PSSHQ +RRA F+PRPSRLSV+SKA+D+
Sbjct: 189 PSSHQQKRRAGFQPRPSRLSVMSKAEDI 216

[Close]

BLAST of CmoCh05G003740 vs. NCBI nr
Match: gi|645225355|ref|XP_008219542.1| (PREDICTED: putative protein TPRXL [Prunus mume])

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 127/214 (59.35%), Postives = 151/214 (70.56%), Query Frame = 1


Query: 2   KKETSGPVLRPLPAAGRFH-------SPISSPFAASTSFGFSSTSSSFF----------- 61
           +  +SGPVLR L  +GRF+       S  +S FA+STS  FSS +S+FF           
Sbjct: 12  RTRSSGPVLRSLSPSGRFYTASNASISSSASGFASSTSSSFSSPTSAFFSHHKDHHYYNQ 71

Query: 62  ----HNRERSASPTRVNI--SSGPLSRSVRFSIDHRSGS---TSRSIALSNRNSPVSQPK 121
               H+  RSASPTRVN+  SS P S SVRFSIDHRS S   ++RSI +S +N P+S PK
Sbjct: 72  QINHHHHHRSASPTRVNLYTSSAP-SPSVRFSIDHRSISPNHSNRSITVSKKNGPISMPK 131

Query: 122 KTCTCSPTTHPGSFRCSLHRNSGNGGHHQTYSSSGLNMRRSAMTNSLVRIGGVEGDWVKR 181
           KTC CSPT+HPGSFRCSLH+N G G +   Y ++ LNMRRSAMTNSLVRIGGVEG+WVKR
Sbjct: 132 KTCMCSPTSHPGSFRCSLHKNVGGGHNAAPYPTNRLNMRRSAMTNSLVRIGGVEGEWVKR 191

Query: 182 ALTALIRPSSHQLRRRANFRPRPSRLSVVSKADD 189
           ALTALIRP +HQ RRRA F+PRPSRLS +S  DD
Sbjct: 192 ALTALIRPCAHQQRRRAGFQPRPSRLSAMSTTDD 224

[Close]

BLAST of CmoCh05G003740 vs. NCBI nr
Match: gi|703111463|ref|XP_010099865.1| (hypothetical protein L484_008522 [Morus notabilis])

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 128/206 (62.14%), Postives = 151/206 (73.30%), Query Frame = 1


Query: 2   KKETSGPVLRPLPAAGRFHSP--------ISSPFAASTSFGFSSTSSSFFHNRE------ 61
           +  +SGPVLR L   GRF+S          SS FA+STS  F S +S+FF ++E      
Sbjct: 10  RTRSSGPVLRSLSPCGRFYSQPSNSSISSSSSGFASSTSSSFYSKASTFFGHQEDHHYES 69

Query: 62  -RSASPTRVNIS-SGPLSRSVRFSIDHRSGSTSRSIALSNRNSPVSQPKKTCTCSPTTHP 121
            R ASPTRVN+  S P S+SVRFSIDHRS S +RSI +S +  P+S  K+TC CSPTTHP
Sbjct: 70  HRPASPTRVNLCPSAPRSQSVRFSIDHRSISPNRSITVSKQR-PISMTKRTCMCSPTTHP 129

Query: 122 GSFRCSLHRNSGNGGHHQ--TYSSSGLNMRRSAMTNSLVRIGGVEGDWVKRALTALIRPS 181
           GSFRCSLH+N  +GG H   +Y S+ LNMRRSAMTNSLVRIGGVEG+WVKRALTALIRPS
Sbjct: 130 GSFRCSLHKNVSSGGSHNAASYPSNRLNMRRSAMTNSLVRIGGVEGEWVKRALTALIRPS 189

Query: 182 SHQLRRRANFRPRPSRLSVVSKADDL 190
           SHQ RRR+ F+P  SRLSV+SKADDL
Sbjct: 190 SHQQRRRSAFQPTRSRLSVMSKADDL 214

The following BLAST results are available for this feature:

BLAST of CmoCh05G003740 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh05G003740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LME8_CUCSA	5.3e-68	75.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382420 PE=4 SV=1	[more]
W9RB29_9ROSA	9.2e-52	62.14	Uncharacterized protein OS=Morus notabilis GN=L484_008522 PE=4 SV=1	[more]
V7AWI4_PHAVU	1.2e-51	61.21	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G090900g PE=4 SV=1	[more]
I1JUA4_SOYBN	1.6e-51	61.32	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
M5Y5X7_PRUPE	2.0e-51	59.62	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011080mg PE=4 SV=1	[more]

BLAST of CmoCh05G003740 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11090.1	1.1e-48	55.24	serine-rich protein-related	[more]
AT5G25280.1	9.4e-48	59.78	serine-rich protein-related	[more]
AT5G20370.1	2.1e-15	34.03	serine-rich protein-related	[more]

BLAST of CmoCh05G003740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088936\|ref\|XP_008445241.1\|	1.8e-69	76.85	PREDICTED: uncharacterized protein LOC103488327 [Cucumis melo]	[more]
gi\|449441894\|ref\|XP_004138717.1\|	7.7e-68	75.12	PREDICTED: uncharacterized protein LOC101214709 [Cucumis sativus]	[more]
gi\|1009136986\|ref\|XP_015885815.1\|	2.2e-54	62.50	PREDICTED: putative protein TPRXL [Ziziphus jujuba]	[more]
gi\|645225355\|ref\|XP_008219542.1\|	1.3e-51	59.35	PREDICTED: putative protein TPRXL [Prunus mume]	[more]
gi\|703111463\|ref\|XP_010099865.1\|	1.3e-51	62.14	hypothetical protein L484_008522 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G003740.1	CmoCh05G003740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33132	FAMILY NOT NAMED	coord: 3..69 score: 9.4E-63coord: 91..189 score: 9.4
None	No IPR available	PANTHER	PTHR33132:SF14	SUBFAMILY NOT NAMED	coord: 3..69 score: 9.4E-63coord: 91..189 score: 9.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G003740	Cucsa.271840	Cucumber (Gy14) v1	cgycmoB0749
CmoCh05G003740	Cucsa.162580	Cucumber (Gy14) v1	cgycmoB0463
CmoCh05G003740	CmaCh05G003710	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G003740	CmaCh09G004350	Cucurbita maxima (Rimu)	cmacmoB061
CmoCh05G003740	Cla022339	Watermelon (97103) v1	cmowmB748
CmoCh05G003740	Cla020996	Watermelon (97103) v1	cmowmB751
CmoCh05G003740	Csa2G382420	Cucumber (Chinese Long) v2	cmocuB785
CmoCh05G003740	Csa4G652810	Cucumber (Chinese Long) v2	cmocuB791
CmoCh05G003740	MELO3C016995	Melon (DHL92) v3.5.1	cmomeB731
CmoCh05G003740	MELO3C011275	Melon (DHL92) v3.5.1	cmomeB716
CmoCh05G003740	ClCG05G016650	Watermelon (Charleston Gray)	cmowcgB704
CmoCh05G003740	ClCG08G013480	Watermelon (Charleston Gray)	cmowcgB716
CmoCh05G003740	CSPI04G26600	Wild cucumber (PI 183967)	cmocpiB794
CmoCh05G003740	CSPI02G23680	Wild cucumber (PI 183967)	cmocpiB788
CmoCh05G003740	Lsi04G021050	Bottle gourd (USVL1VR-Ls)	cmolsiB719
CmoCh05G003740	Lsi08G012190	Bottle gourd (USVL1VR-Ls)	cmolsiB731
CmoCh05G003740	Cp4.1LG11g03130	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G003740	Cp4.1LG06g03210	Cucurbita pepo (Zucchini)	cmocpeB738
CmoCh05G003740	Cp4.1LG07g03110	Cucurbita pepo (Zucchini)	cmocpeB750
CmoCh05G003740	MELO3C011275.2	Melon (DHL92) v3.6.1	cmomedB813
CmoCh05G003740	MELO3C016995.2	Melon (DHL92) v3.6.1	cmomedB828
CmoCh05G003740	CsaV3_2G032230	Cucumber (Chinese Long) v3	cmocucB0925
CmoCh05G003740	CsaV3_4G036960	Cucumber (Chinese Long) v3	cmocucB0932
CmoCh05G003740	Cla97C08G156870	Watermelon (97103) v2	cmowmbB802
CmoCh05G003740	Cla97C05G097670	Watermelon (97103) v2	cmowmbB790
CmoCh05G003740	Bhi09G002435	Wax gourd	cmowgoB0965
CmoCh05G003740	Bhi04G000011	Wax gourd	cmowgoB0945
CmoCh05G003740	CsGy4G024940	Cucumber (Gy14) v2	cgybcmoB532
CmoCh05G003740	Carg02864	Silver-seed gourd	carcmoB0878
CmoCh05G003740	Carg09343	Silver-seed gourd	carcmoB0196
CmoCh05G003740	Carg03937	Silver-seed gourd	carcmoB1319

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh05G003740	CmoCh09G004410	Cucurbita moschata (Rifu)	cmocmoB032
CmoCh05G003740	CmoCh12G002980	Cucurbita moschata (Rifu)	cmocmoB156

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G003740	Cucurbita maxima (Rimu)	cmacmoB199
CmoCh05G003740	Cucumber (Gy14) v2	cgybcmoB244