Cp4.1LG12g07310 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAATGTAGAAAGAGTCAATTTAGTCCAAAGACGGGACAACAAAAACACCGTAACCAAACGCCCCCAAAGGGTTCACCGAGCATTGAGTAAAACTGGAAGAACACACCATTTTGAGAGACAATCGGCGGACAAAATGAGCGGCGAGGCCAAGAGCGGCGGTTCGATCGGCGGAGGAGGTGGTTTCAGATCGCGCATGGAGCACTATTTATACAGCGGTGAGAAGAAGCACGTCGCCGCTGGCATCGTCGTCATTGGCATCATCTTCGGCATCCCTTGGGCCCTTATGAATCGAGGTTTTTGTTCTTTCCTTTACCAAATTTTGTTTCTGTTACTCTTATCTCTGATGATCGTTTGTTTCTGCTGAGAGGAATTGATGTGGAAAAGCAGATTTGGTTTTTTTTTTTTTTGCCCGGGATTTGAAGAAGGGATACGTTTAAATATTGACGTGTGCTGTGCACTAAGAAGATTTCGATTCTTGGATGGAGTTCTGTTTAAAAATTACTTCTTAGTTTTGCTTGAAAACCGAACAGGGAATTCAGCAATCTTTGGATTGCAATTGTGGGCGTCCGGGTGTTCACTTTTTCGTTGTGTAATTTAGGGTTTCAGAATCTGGGCAGCTTCGATACGATATGTTTAGAAATTGTACGTTTTGCTGTTGGGGTGATTCTGTAGAGGATTTGACAATACTGATTTTTTGAACTTCAGAAATGTTCCAAGAGAAATCAAAAGTGATGCCTTGGGGCTGTATGGGAAGTGCTCTAGAGTAACATATTGATGAAAATGTCTTTATAAAGTTTTGTTTGTCGGCTTACTTTTAGATTGTTTTCATGGTCGATTTGGTTGTAGCTAAACTGAAGCTATTCTTCCTTATAAGATCATAGGCGAGTAAGTAGTGTCGATTAAACTGCTGGTGTATATATTCGATCTAAGAGGCCAGAGATTCGAATCTTCCATCCCACGAGTTGTTGAACTTACAAAAAAATCTTATGAGACTTTTGCCCCACTCTAATTTCCCCCAGAAGTCAAATAGGATCGAAAGTTGGACTATTCCCTTACCGAAAGGCAAGCAAGCCTAAGCTGCTTTACTTTGTGAAATCAGGTCAGGGAATAGAGTCAAAGGTTTAGGAGCAAACAAACCTATGCTAATTGCTAACATGACGATGGCTCTCGGGAAAGGGTAGAGTATGCCTACAATCAATCTTTACACACATGATAGTAAAGCTAGGTTATCGATGATTCTACGATAGGCAGCCGCTACGTAAATAGATAAAAGCCCCCAAACACACTGCTACATAAATCTATTTGAGGCTTTATTTAAAATCGACATGACTCATCATCACCACTTAATTGTTTGCAGGGTCAAAGCATCAGTCTCATCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGATTTTTTTTTTTGTTTTTTTTTTTTTGGGTTTCTTCTGATAGAGAGGATGTTCTTTGGGGCACTTGGTTGGCTTAAAGTTTTTGTAGTATCTCCTATATCTTGCATTTTTTTCCTCCATCTGCTGACACTAAATGAAGATAAGTTAAAACTCAACAAGGAACACTTGTGGTTTTGAAATAAAGAACGAACTTTTGTTCCCTTTTGTACTATTTAGCCCCCTTTACTTGTCTCTTTATATTCTACTTTTAGTGTTGAAATGGTTCTTA GGAATGTAGAAAGAGTCAATTTAGTCCAAAGACGGGACAACAAAAACACCGTAACCAAACGCCCCCAAAGGGTTCACCGAGCATTGAGTAAAACTGGAAGAACACACCATTTTGAGAGACAATCGGCGGACAAAATGAGCGGCGAGGCCAAGAGCGGCGGTTCGATCGGCGGAGGAGGTGGTTTCAGATCGCGCATGGAGCACTATTTATACAGCGGTGAGAAGAAGCACGTCGCCGCTGGCATCGTCGTCATTGGCATCATCTTCGGCATCCCTTGGGCCCTTATGAATCGAGGGTCAAAGCATCAGTCTCATCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGATTTTTTTTTTTGTTTTTTTTTTTTTGGGTTTCTTCTGATAGAGAGGATGTTCTTTGGGGCACTTGGTTGGCTTAAAGTTTTTGTAGTATCTCCTATATCTTGCATTTTTTTCCTCCATCTGCTGACACTAAATGAAGATAAGTTAAAACTCAACAAGGAACACTTGTGGTTTTGAAATAAAGAACGAACTTTTGTTCCCTTTTGTACTATTTAGCCCCCTTTACTTGTCTCTTTATATTCTACTTTTAGTGTTGAAATGGTTCTTA ATGAGCGGCGAGGCCAAGAGCGGCGGTTCGATCGGCGGAGGAGGTGGTTTCAGATCGCGCATGGAGCACTATTTATACAGCGGTGAGAAGAAGCACGTCGCCGCTGGCATCGTCGTCATTGGCATCATCTTCGGCATCCCTTGGGCCCTTATGAATCGAGGGTCAAAGCATCAGTCTCATCAAGATTACATGGAAAGAGCTGATAAAGCACGAAGTCAGAGACTCTCTTCAGGTTCATCATCAGCTAAATGA MSGEAKSGGSIGGGGGFRSRMEHYLYSGEKKHVAAGIVVIGIIFGIPWALMNRGSKHQSHQDYMERADKARSQRLSSGSSSAK
BLAST of Cp4.1LG12g07310 vs. TrEMBL
Match: W9QVG6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018067 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 4.8e-29 Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. TrEMBL
Match: V4SPP9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026865mg PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.0e-26 Identity = 64/84 (76.19%), Postives = 74/84 (88.10%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. TrEMBL
Match: A0A067EN80_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034759mg PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 3.8e-26 Identity = 63/84 (75.00%), Postives = 73/84 (86.90%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. TrEMBL
Match: A0A068TSD1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022264001 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.5e-25 Identity = 59/81 (72.84%), Postives = 70/81 (86.42%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. TrEMBL
Match: A0A0E0BTZ4_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 2.5e-25 Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. TAIR10
Match: AT1G16000.1 (AT1G16000.1 unknown protein) HSP 1 Score: 112.8 bits (281), Expect = 9.9e-26 Identity = 56/86 (65.12%), Postives = 68/86 (79.07%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. TAIR10
Match: AT1G80890.1 (AT1G80890.1 unknown protein) HSP 1 Score: 111.3 bits (277), Expect = 2.9e-25 Identity = 58/83 (69.88%), Postives = 67/83 (80.72%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. NCBI nr
Match: gi|449436195|ref|XP_004135879.1| (PREDICTED: uncharacterized protein LOC101214375 [Cucumis sativus]) HSP 1 Score: 152.1 bits (383), Expect = 4.2e-34 Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. NCBI nr
Match: gi|659122517|ref|XP_008461185.1| (PREDICTED: uncharacterized protein LOC103499845 [Cucumis melo]) HSP 1 Score: 151.4 bits (381), Expect = 7.1e-34 Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. NCBI nr
Match: gi|703090334|ref|XP_010094051.1| (hypothetical protein L484_018067 [Morus notabilis]) HSP 1 Score: 134.8 bits (338), Expect = 6.9e-29 Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. NCBI nr
Match: gi|747054243|ref|XP_011073320.1| (PREDICTED: uncharacterized protein LOC105158304 [Sesamum indicum]) HSP 1 Score: 129.4 bits (324), Expect = 2.9e-27 Identity = 63/83 (75.90%), Postives = 73/83 (87.95%), Query Frame = 1
BLAST of Cp4.1LG12g07310 vs. NCBI nr
Match: gi|567870057|ref|XP_006427650.1| (hypothetical protein CICLE_v10026865mg [Citrus clementina]) HSP 1 Score: 127.1 bits (318), Expect = 1.4e-26 Identity = 64/84 (76.19%), Postives = 74/84 (88.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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