Cp4.1LG12g04400 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g04400
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAuxin-responsive family protein
LocationCp4.1LG12 : 3679140 .. 3679442 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGTGGGGAGAGAAGCCAAGGGAGCTTCAAGAGCGTCCCAAAGGGCTGTTTGGCTATCAAAGTTGGGCATGAACATGAAGAGAAGCAGCGATTTATAGTCCCTCTCTTCTATTTCAATCACCCTTTGTTCTTGCAGCTACTCAAGCAAGCTGAAGACGAATATGGGTTTCATCAAAAGGGAACCATCACTCTTCCTTGTCATATCCACCAATTTAGGTTTGTTCAAGCCTTGATTGATCAAGAAACCTCCTTCCATCACCAACACCACCACCTCTACGGTCCTTGCTTTAGGGTTTGA

mRNA sequence

ATGGGTAGTGGGGAGAGAAGCCAAGGGAGCTTCAAGAGCGTCCCAAAGGGCTGTTTGGCTATCAAAGTTGGGCATGAACATGAAGAGAAGCAGCGATTTATAGTCCCTCTCTTCTATTTCAATCACCCTTTGTTCTTGCAGCTACTCAAGCAAGCTGAAGACGAATATGGGTTTCATCAAAAGGGAACCATCACTCTTCCTTGTCATATCCACCAATTTAGGTTTGTTCAAGCCTTGATTGATCAAGAAACCTCCTTCCATCACCAACACCACCACCTCTACGGTCCTTGCTTTAGGGTTTGA

Coding sequence (CDS)

ATGGGTAGTGGGGAGAGAAGCCAAGGGAGCTTCAAGAGCGTCCCAAAGGGCTGTTTGGCTATCAAAGTTGGGCATGAACATGAAGAGAAGCAGCGATTTATAGTCCCTCTCTTCTATTTCAATCACCCTTTGTTCTTGCAGCTACTCAAGCAAGCTGAAGACGAATATGGGTTTCATCAAAAGGGAACCATCACTCTTCCTTGTCATATCCACCAATTTAGGTTTGTTCAAGCCTTGATTGATCAAGAAACCTCCTTCCATCACCAACACCACCACCTCTACGGTCCTTGCTTTAGGGTTTGA

Protein sequence

MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV
Homology
[Close]
BLAST of Cp4.1LG12g04400 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.7e-32
Identity = 73/121 (60.33%), Postives = 86/121 (71.07%), Query Frame = 1 

Query: 1   MGSGERSQGSF----------KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLK 60
           MG+GE++  SF          K VPKGCLAIKVG + EE+QRFIVP+ YFNHPLF+QLLK
Sbjct: 1   MGTGEKTLKSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLK 60

Query: 61  QAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS------FHHQH------HHLYGPCF 100
           +AEDEYGF QKGTIT+PCH+ +FR+VQALID E S       HH+H      HHL G CF
Sbjct: 61  EAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGGRDQYHHLVG-CF 120

[Close]
BLAST of Cp4.1LG12g04400 vs. Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-12
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 1 

Query: 14  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQF 73
           VP+G LAI VG +  +  R +VP+ YFNHPLF +LL++AE EYGF  +G IT+PC    F
Sbjct: 79  VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDF 138

Query: 74  RFVQALIDQETS 86
             V+  I   +S
Sbjct: 139 ERVKTRIASGSS 150

[Close]
BLAST of Cp4.1LG12g04400 vs. Swiss-Prot
Match: SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 6.0e-11
Identity = 31/81 (38.27%), Postives = 52/81 (64.20%), Query Frame = 1 

Query: 1  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGF-H 60
          +G+ +  +    S P+G +A+ VG   ++K+R++VP+ Y N PLF QLL ++E+E+G+ H
Sbjct: 8  LGAKQIIRRESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDH 67

Query: 61 QKGTITLPCHIHQFRFVQALI 81
            G +T+PCH   F  V + I
Sbjct: 68 PMGGLTIPCHESLFFTVTSQI 88

[Close]
BLAST of Cp4.1LG12g04400 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-10
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 1 

Query: 6  RSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGF-HQKGTI 65
          RS  +  + PKG LA+ VG    +K+R++VPL Y N P F  LL ++EDE+GF H  G +
Sbjct: 16 RSTAAVSAAPKGFLAVYVGES--QKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGL 75

Query: 66 TLPCHIHQF 74
          T+PCH   F
Sbjct: 76 TIPCHEDTF 82

[Close]
BLAST of Cp4.1LG12g04400 vs. Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-09
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 1 

Query: 14  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQF 73
           VP+G + + VGHE E   RF+V     NHP+F+ LLKQ+  EYG+ Q+G + +PCH+  F
Sbjct: 38  VPEGHVPVYVGHEME---RFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVF 97

Query: 74  -RFVQAL 80
            R +++L
Sbjct: 98  ERILESL 101

[Close]
BLAST of Cp4.1LG12g04400 vs. TrEMBL
Match: A0A0A0KFM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106780 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.3e-44
Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 1 

Query: 1   MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQ 60
           MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF Q
Sbjct: 1   MGSGERSQESFKDVPKGCLAIKVGHESEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ 60

Query: 61  KGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFR 100
           KGTIT+PCH+ QFR+VQALID+ETSFHH HHHLY PCFR
Sbjct: 61  KGTITIPCHVEQFRYVQALIDRETSFHHNHHHLYVPCFR 99

[Close]
BLAST of Cp4.1LG12g04400 vs. TrEMBL
Match: E5GCM6_CUCME (Auxin-responsive family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 8.3e-44
Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 1   MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQ 60
           MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF Q
Sbjct: 1   MGSGERSQESFKDVPKGCLAIKVGHESEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ 60

Query: 61  KGTITLPCHIHQFRFVQALIDQETSF-HHQHHHLYGPCFRV 101
           KGTIT+PCH+ QFR+VQALID+ETSF HH HHHLY PCFRV
Sbjct: 61  KGTITIPCHVEQFRYVQALIDRETSFHHHHHHHLYVPCFRV 101

[Close]
BLAST of Cp4.1LG12g04400 vs. TrEMBL
Match: A0A0D2QRQ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G044200 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.8e-31
Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 1 

Query: 6   RSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTIT 65
           + QGS   VPKGCLAIKVG E EE+QRF+VP+ YFNHPLF+QLLK+AE+EYGF QKGTIT
Sbjct: 29  KKQGS--DVPKGCLAIKVGSEGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTIT 88

Query: 66  LPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV 101
           +PC++ +FR V+ LID+E S HH HHH Y  CFRV
Sbjct: 89  IPCNVQEFRNVRGLIDRENSLHHHHHHHYVWCFRV 121

[Close]
BLAST of Cp4.1LG12g04400 vs. TrEMBL
Match: A0A0A0L5S7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118740 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-31
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 1 

Query: 1   MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQ 60
           MG GER + S  +VPKGCLA+KVG + EE+QRF+VP+ YFNHP F+QLLK+AE+EYGF Q
Sbjct: 1   MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ 60

Query: 61  KGTITLPCHIHQFRFVQALIDQETSFH---------HQHHHLYGPCFRV 101
           KGTI +PCH+ +FR VQ +ID+E SFH          QHHH +  CFRV
Sbjct: 61  KGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 109

[Close]
BLAST of Cp4.1LG12g04400 vs. TrEMBL
Match: A0A087H5P6_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G258100 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.0e-31
Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 1 

Query: 1   MGSGERSQGSF----------KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLK 60
           MG+GE++  +F          K VPKGCLAIKVG + EE+QRFIVP+ YFNHPLF+QLLK
Sbjct: 1   MGTGEKALKNFHLLRKQTLKIKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLK 60

Query: 61  QAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHH-------QHHHLYGPCFR 100
           +AEDEYGF QKGTIT+PCH+ +FR+VQALID E S +H       Q+HHL G CFR
Sbjct: 61  EAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYHGNNNTNNQYHHLVG-CFR 115

[Close]
BLAST of Cp4.1LG12g04400 vs. TAIR10
Match: AT2G46690.1 (AT2G46690.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-33
Identity = 73/121 (60.33%), Postives = 86/121 (71.07%), Query Frame = 1 

Query: 1   MGSGERSQGSF----------KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLK 60
           MG+GE++  SF          K VPKGCLAIKVG + EE+QRFIVP+ YFNHPLF+QLLK
Sbjct: 1   MGTGEKTLKSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLK 60

Query: 61  QAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS------FHHQH------HHLYGPCF 100
           +AEDEYGF QKGTIT+PCH+ +FR+VQALID E S       HH+H      HHL G CF
Sbjct: 61  EAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGGRDQYHHLVG-CF 120

[Close]
BLAST of Cp4.1LG12g04400 vs. TAIR10
Match: AT3G61900.1 (AT3G61900.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-29
Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 1 

Query: 1   MGSGER----------------SQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPL 60
           MGSGE+                S+   K VPKGCLAIKVG + EEKQRF+VP+FYFNHPL
Sbjct: 1   MGSGEKILKSVHSNRPNNVKSNSKHGIKDVPKGCLAIKVGSKEEEKQRFVVPVFYFNHPL 60

Query: 61  FLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS 86
           F+QLL++AE+EYGF QKGTIT+PCH+  FR+VQ +I++E S
Sbjct: 61  FMQLLREAEEEYGFEQKGTITIPCHVEVFRYVQDMINRERS 101

[Close]
BLAST of Cp4.1LG12g04400 vs. TAIR10
Match: AT4G00880.1 (AT4G00880.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 121.7 bits (304), Expect = 2.6e-28
Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 1 

Query: 12  KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIH 71
           + VPKGCLA+KVG + EE++RF++P+ YFNHPLF QLLK+AE+E+GF QKGTIT+PCH+ 
Sbjct: 26  EKVPKGCLAVKVG-QGEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVE 85

Query: 72  QFRFVQALIDQETS---------FHHQHHHLYGPCFRV 101
           +FR+VQ LID+E +          HH HH+    CFRV
Sbjct: 86  EFRYVQGLIDRENTRFLGTNLLDHHHHHHNHLIRCFRV 122

[Close]
BLAST of Cp4.1LG12g04400 vs. TAIR10
Match: AT5G53590.1 (AT5G53590.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.8 bits (247), Expect = 1.0e-21
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 1 

Query: 14  VPKGCLAIKVGHEHEEK--QRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIH 73
           VPKGC+AI VGHE +E+   RF+VPL + +HPLFL LLK+AE EYGF   G IT+PC + 
Sbjct: 46  VPKGCVAIMVGHEDDEEGLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVD 105

Query: 74  QFRFVQALIDQETSFHHQH 91
           +F+ VQ +ID+ET   H H
Sbjct: 106 EFKHVQEVIDEETHRRHSH 124

[Close]
BLAST of Cp4.1LG12g04400 vs. TAIR10
Match: AT3G60690.1 (AT3G60690.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 80.1 bits (196), Expect = 8.5e-16
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 1 

Query: 14  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQF 73
           VPKG  A+ +G +  + QR +VP+ YFNHPLF +LL++AE+E+GF Q+G IT+PC    F
Sbjct: 88  VPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGITIPCPYSDF 147

Query: 74  RFVQALIDQETSF 87
           + VQ  I+  + F
Sbjct: 148 KRVQTRIESGSGF 160

[Close]
BLAST of Cp4.1LG12g04400 vs. NCBI nr
Match: gi|778712138|ref|XP_011656853.1| (PREDICTED: auxin-induced protein X15 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-44
Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 1 

Query: 1   MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQ 60
           MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF Q
Sbjct: 1   MGSGERSQESFKDVPKGCLAIKVGHESEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ 60

Query: 61  KGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFR 100
           KGTIT+PCH+ QFR+VQALID+ETSFHH HHHLY PCFR
Sbjct: 61  KGTITIPCHVEQFRYVQALIDRETSFHHNHHHLYVPCFR 99

[Close]
BLAST of Cp4.1LG12g04400 vs. NCBI nr
Match: gi|307136418|gb|ADN34225.1| (auxin-responsive family protein [Cucumis melo subsp. melo])

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 84/101 (83.17%), Postives = 92/101 (91.09%), Query Frame = 1 

Query: 1   MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQ 60
           MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF Q
Sbjct: 1   MGSGERSQESFKDVPKGCLAIKVGHESEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ 60

Query: 61  KGTITLPCHIHQFRFVQALIDQETSF-HHQHHHLYGPCFRV 101
           KGTIT+PCH+ QFR+VQALID+ETSF HH HHHLY PCFRV
Sbjct: 61  KGTITIPCHVEQFRYVQALIDRETSFHHHHHHHLYVPCFRV 101

[Close]
BLAST of Cp4.1LG12g04400 vs. NCBI nr
Match: gi|659119628|ref|XP_008459757.1| (PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo])

HSP 1 Score: 181.4 bits (459), Expect = 7.7e-43
Identity = 83/101 (82.18%), Postives = 91/101 (90.10%), Query Frame = 1 

Query: 1   MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQ 60
           MGSGE SQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF Q
Sbjct: 1   MGSGEGSQESFKDVPKGCLAIKVGHESEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ 60

Query: 61  KGTITLPCHIHQFRFVQALIDQETSF-HHQHHHLYGPCFRV 101
           KGTIT+PCH+ QFR+VQALID+ETSF HH HHHLY PCFRV
Sbjct: 61  KGTITIPCHVEQFRYVQALIDRETSFHHHHHHHLYVPCFRV 101

[Close]
BLAST of Cp4.1LG12g04400 vs. NCBI nr
Match: gi|823146956|ref|XP_012473385.1| (PREDICTED: auxin-induced protein X15-like [Gossypium raimondii])

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-31
Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 1 

Query: 6   RSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTIT 65
           + QGS   VPKGCLAIKVG E EE+QRF+VP+ YFNHPLF+QLLK+AE+EYGF QKGTIT
Sbjct: 29  KKQGS--DVPKGCLAIKVGSEGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTIT 88

Query: 66  LPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV 101
           +PC++ +FR V+ LID+E S HH HHH Y  CFRV
Sbjct: 89  IPCNVQEFRNVRGLIDRENSLHHHHHHHYVWCFRV 121

[Close]
BLAST of Cp4.1LG12g04400 vs. NCBI nr
Match: gi|1009142561|ref|XP_015888787.1| (PREDICTED: auxin-responsive protein SAUR32-like [Ziziphus jujuba])

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-31
Identity = 63/96 (65.62%), Postives = 78/96 (81.25%), Query Frame = 1 

Query: 5   ERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTI 64
           ++ Q   + VPKGCLAIKVG + EE QRF+VP+ YFNHPLF+QLLK+AE+EYGF QKGTI
Sbjct: 30  QQQQVVMRDVPKGCLAIKVGQQGEEPQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTI 89

Query: 65  TLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV 101
           T+PCH+ +FR+VQ LID+E S HH HHH +  CFRV
Sbjct: 90  TIPCHVEEFRYVQGLIDREKSLHH-HHHYHVGCFRV 124

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g04400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAU32_ARATH2.7e-3260.33Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1[more]
SAU36_ARATH1.9e-1248.61Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1[more]
SAU15_ARATH6.0e-1138.27Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1[more]
SAU22_ARATH3.9e-1046.38Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1[more]
SAU71_ARATH1.5e-0944.78Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1[more]
BLAST of Cp4.1LG12g04400 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFM7_CUCSA1.3e-4483.84Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106780 PE=4 SV=1[more]
E5GCM6_CUCME8.3e-4483.17Auxin-responsive family protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0D2QRQ4_GOSRA2.8e-3168.42Uncharacterized protein OS=Gossypium raimondii GN=B456_004G044200 PE=4 SV=1[more]
A0A0A0L5S7_CUCSA4.7e-3159.63Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118740 PE=4 SV=1[more]
A0A087H5P6_ARAAL8.0e-3161.21Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G258100 PE=4 SV=1[more]
BLAST of Cp4.1LG12g04400 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46690.11.5e-3360.33 SAUR-like auxin-responsive protein family [more]
AT3G61900.11.4e-2958.42 SAUR-like auxin-responsive protein family [more]
AT4G00880.12.6e-2857.14 SAUR-like auxin-responsive protein family [more]
AT5G53590.11.0e-2156.96 SAUR-like auxin-responsive protein family [more]
AT3G60690.18.5e-1647.95 SAUR-like auxin-responsive protein family [more]
BLAST of Cp4.1LG12g04400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778712138|ref|XP_011656853.1|1.8e-4483.84PREDICTED: auxin-induced protein X15 [Cucumis sativus][more]
gi|307136418|gb|ADN34225.1|1.2e-4383.17auxin-responsive family protein [Cucumis melo subsp. melo][more]
gi|659119628|ref|XP_008459757.1|7.7e-4382.18PREDICTED: indole-3-acetic acid-induced protein ARG7 [Cucumis melo][more]
gi|823146956|ref|XP_012473385.1|4.0e-3168.42PREDICTED: auxin-induced protein X15-like [Gossypium raimondii][more]
gi|1009142561|ref|XP_015888787.1|4.0e-3165.63PREDICTED: auxin-responsive protein SAUR32-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0040008 regulation of growth
biological_process GO:1900140 regulation of seedling development
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g04400.1Cp4.1LG12g04400.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 10..77
score: 9.7
NoneNo IPR availablePANTHERPTHR31374FAMILY NOT NAMEDcoord: 12..92
score: 1.1
NoneNo IPR availablePANTHERPTHR31374:SF29SUBFAMILY NOT NAMEDcoord: 12..92
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g04400Cucsa.120950Cucumber (Gy14) v1cgycpeB0286
Cp4.1LG12g04400CmaCh17G005120Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g04400CmoCh17G004840Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g04400Cla006703Watermelon (97103) v1cpewmB155
Cp4.1LG12g04400Csa6G106780Cucumber (Chinese Long) v2cpecuB152
Cp4.1LG12g04400MELO3C022261Melon (DHL92) v3.5.1cpemeB112
Cp4.1LG12g04400CSPI06G08420Wild cucumber (PI 183967)cpecpiB154
Cp4.1LG12g04400Lsi09G016720Bottle gourd (USVL1VR-Ls)cpelsiB101
Cp4.1LG12g04400MELO3C022261.2Melon (DHL92) v3.6.1cpemedB138
Cp4.1LG12g04400CsaV3_6G008790Cucumber (Chinese Long) v3cpecucB0176
Cp4.1LG12g04400Bhi12G001960Wax gourdcpewgoB0174
Cp4.1LG12g04400CsGy6G008500Cucumber (Gy14) v2cgybcpeB732
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g04400Cp4.1LG17g10370Cucurbita pepo (Zucchini)cpecpeB163
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g04400Cucurbita maxima (Rimu)cmacpeB898
Cp4.1LG12g04400Cucurbita moschata (Rifu)cmocpeB836
Cp4.1LG12g04400Watermelon (Charleston Gray)cpewcgB144
Cp4.1LG12g04400Silver-seed gourdcarcpeB0117