Cp4.1LG10g12270 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g12270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionComplex 1 LYR-like protein
LocationCp4.1LG10 : 9219561 .. 9224058 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCTGCATTCATATTCGAAGTGGATCCGTGCTTGTGTATTCGAAACCATTCCAATCGGATTTCCTCAGAATTAGGGCTTCAGGGTCGAATCGCGAGTCTCGTTGCGTTCTCTTCAAGGTCAGTGTAGCCGCTTCTTGATTGAAAGTTGCAGATTCTTCTTAATTTGGCACCATTGATTAAGCATTTTTCAATTCTATACTTCCTGTGATGATTTTCTCTTGGCTTTGCATATTTTTGGATACAAATTTGCCAATTTTTCTTCAAGTACTTACATTTGTGCTGTCTGTTTACTCCGTTCTTAGAATCAGGGCTTCCTTTCTTTCTGTTTTTAGTGGCAATGAAGTTCTTGAATAAATCTTCACTCAACCGTCGTATTTCCAGAAACCAAATCAAATCGATTATTCGAATCAAGGAGGTTCAGTTTGGCTAATTTCTCTGGCCATTTCAAATTAAACCAAACTAATTCAAGATGGTTCTGTTACCAGTCATATGATATGATATTGTTCAGTCGGCCAATATAATTACGAATGAAATTCATTTTTGGTGACTGTATATTTATTTATTGTATTGATCCATTTTTAACTGCATAGGTGTTTCTTCTCAAATCTCATTACAGCTCTATTGTATCTGCCGCCACCATTGCCATGAAGTTCTCAAATCTATTATGTTATTAGTCAATATTTTCTGGGCAGAGCACATAGTGAAATCGTAGACTTTTTGAGTGACAAGAAGAGGCCCTTGAAGACTTTTTAAGTTGGAAATGAATTCAGAAGCCTCGCAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAACCATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAGACAAGCACAGTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGTGCACCATCAAAAGGCAATACTTCACTTCCACTATTTAAAACTTTTTTCTTGTTCGAATAAAGAATTAGGCCTTGATAACCATTGTTGTATTTTTCATAGTTTCTTTAGAATGAATTTCATCTTTTATAACTTATAAGGGAACCTTCAGATTCTTAGTCGAATTTCAAAAACAATTTTTTTTCGAACTTGGCTTGAATTTCAGAAACATTCAACCCTTTGGCTATAGGTGGAAGTAGTGTTGCCTAGTGGGGCCTCAGTAATCTTTTGTTTGGTTATGTGATTCATTCACTATAATTTTCTTTTACAATGTAGATTAATTTGTAGTCCATTGAGGATTTGACAAATGAGGACTTGTTAATGGTTCATTAATCTAAGTACGACGTATAATATAGATACTGTTTCATTAGGTGGTTTATCAATCAATTTGTAGATCTTCAATGCAAGATTTGATGGGGAAAATAGCTACTTCTTACGTTCTACTATCTGCAATTACAGAGTAATGAGATATTCAAATTCTAGCAGAAGACAAATTATAGCTCAGAATCAAGAATAAATGAACTTCTGCTTCGTTTCCTCATTTGATGTTTGTTAATAATTGTAATTTTTATTGGTTATGTATGTTCAGGACTTGCTGTTCTCGTACAACATTGCTGTTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCAGCAAGTGTGGGGCTTAAACTTCCGGAGGTTTATCAACCCTGACGCCCTGTGGTTGTTTTATTAAGCAGAATTACTTTGTTCCTCCTAAGAAAAGAAGAATAATGACTTCGATGAGCTGCCTCTGTACCAGCAGACTTTAATATTGTTGATCTTCTACCATCTGATACTTCAGTTTTATGTGCATTGGAAGAAGCAAAGTTCAGCTACGAAGGTTTTATCTTTCCTCTTATTACAACTTCTGAGGGTGAGTTTGACAGCAATCTGGTGAGTTATTTGTTTCATTTCCATATAATATGTACTTCAATAACGTGAAAAAGAGCCGTTGAATTTTGATCAAGAGGCACTTTGACTTAGTTGGATCTTAGTTGTAGGTGTTTTCATCGCAATATAATCAACCAACCGTTTGAAGTTATGTGTTTACTCATTTTCACTTTGACCAACTTCTTGATCAATTATTTTGCTCATCATCCAAGCCCCCCATATAGAATTTCTGAGTAATTGGAAGTCGCTTTAGATGATGAGGCCATAGGAACGGGTGCATCATGACATCGTAAGATATTTTGTCTTAATGAATTAATTGGTACTAGAAATGCTGGAACAGTCGATGACTGCTTAGTCTCATTCGAGAGTCTATTCTCTTTGTATTATATTTTCCGAGGGGGTGGATTTGGGCTCCTTCCCGTCCATTGTATAATTGCGCAGGAAGGTATCACGTGCCTTTTGTCTCATGCATCTAACCTGCTTACGGGTTCACCTGTTTTAGTCATTTATGAAGTATTAGAATTGCAAAATAGGCATTGCCTTTGGTTTCATACTCTATCTACAAATACGAGAATATCCCATTTTAGGTCTAAGTAACATATAATTGAAGGAGATGGAAGACCTCCAATGTCAACTGTCAAATGTTTTCATTTCTATAATTGATTTAGACATTTCTGTATAGATAACAAATCTATTTATAACTGTTCTCTTACAACAGAGAGATTTAATGGTGGTTCAATAATTACGGGATAGAATTGAATTTCCCACGTTTGTGGAAGGATTACTATTTGAGGACTAATTTCCCAGGCATTCAACGGCATGTGCTTGTGCCTCACATTGAGCTCTATATATCCCTTCCCCACTGCACTCCATGCCTTTACCTTACTAGCTTATTTCTGATGGCTTTGAACGACACTTTCTATGTATCCCATGGATCCCCAACGCTAACCATCGACGATGGCATCGAAGCAAGGCACTTCTTCAAATCATGGAAGGACAAGGTTTTTCCCCAAACACCCAAAGCCATTCTTTTTGTCTCTGCCCATTTCGACACCGCCTATCCCACCGTCAACGTCGTTTCTGGCCCCAACGACACCATCTACGACTTCTATGGTTTCCCCTCCTCCATGTACGAGGTAACATACTAAACCTAGCAAGTGTATGTTAGGAACCACGACTTTTCACAATAGTATGATATTATATTGTTCACTTTGAGCATAAGTTCTCATTATTTTGCTTTTGGTTCCCCCAAAAGATCTCGTACCAATAGAGATGAATTCCTTACTTATAAACTCATGATCAACCCTTTAATTAGCCGATGTGCCGATGTGGGACACCTCTTACAACAATTCTCAACCGTTTAGGCATTTATATATTTTCAAGCTTTGAACACTTTGAGAGAAACTTTCCAATATTGATAACAATAATGCATAAATGATGTGAAAAACAGTTAAAATATCCAGCACCAGGAGCTCCGGCATTGGCGAAGAGGGTGAAGGAAGCTCTGATGGGGGCCGGGTTCGAGCGGGTGGACGAGGAGAAAGGGCGAGGGCTGGATCATGGAGCATGGGTTCCTCTGATGTTCATGTATCCAGAGGCAGACATCCCAGTTTGCCAACTTTCAGTACAATCACGCCTAAATGGGACACACCATTACAACATGGGCAAGGCATTGGCCCCTCTTAAGGATGAAGGGGTTCTCATTGTTGGGTCAGGAAGTGCCACACACAACCTTAGGACACTCGACCGCCACGCCAGGTCTTCTGTCAACGCCTCATGGGCCATCGAATTTGACGATTGGCTTAAACATGCTCTCCTTCAAGGAAGGTAATTTCACTTATAATCAAATAAATTAAAAGATATATAATAAATAGAAAGATACTTATAAAAGATATTTGTCTATAATTGTAATATCCCACATAAGTTGGGAGGAGAATGAAACACCGTGGTGTACAAAGTGTGTACAAAATCTCTCTCTAGCAGACGCGTTTTAAAGTCTTGAAGAGAAATCCGAAAGGAAAACTCCAAAGAAGACAATATCTGTGCGGTGGGGTTGGGCTTGGATCGTTACAATAATAAAATATCAATATGATATATATGGTAAGCTATAATTCAATATTAAATATTCATAACCTCTTGTTGGAGTAGACATCTCTCACTTATTCTTTGCTCATTTAGCTTAAATAAATATTTTTTGTTTGAGAATTAGAAGAATATTTCGTGTGGTAGATACGAAGATGTGAACGAGTACAAAAAGAAGGCTCCAAATGCAGAAAAGGCACATCCAAGTCCCGACCACCTATTTCCGCTCCATGTCGCGATCGGGGCAGCCGGAGGCCACCCCAAAACGAAGCTAGTCCACCATAGCTGGGACCTTGGCACCATGTCCTACGCCTCCTACCAGTTCACAGCCTCTTAAACCCTAAACCCACTAATCGCATCAACATTACAAACCTCCAACTCTTCTAGTTGCCTTGTATCTTTGTTAATATAATGGAGTATGTTTGTAAAATGATCCTATTTATTTCTGTGACAAACCATATAATTTGGTTTTGGTTTATTACAACGTTGTAT

mRNA sequence

ACCTGCATTCATATTCGAAGTGGATCCGTGCTTGTGTATTCGAAACCATTCCAATCGGATTTCCTCAGAATTAGGGCTTCAGGGTCGAATCGCGAGTCTCGTTGCGTTCTCTTCAAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAACCATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAGACAAGCACAGTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGACTTGCTGTTCTCGTACAACATTGCTGTTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCAGCAAGTGTGGGGCTTAAACTTCCGGAGGTTTATCAACCCTGACGCCCTGTGGTTGTTTTATTAAGCAGAATTACTTTGTTCCTCCTAAGAAAAGAAGAATAATGACTTCGATGAGCTGCCTCTGTACCAGCAGACTTTAATATTGTTGATCTTCTACCATCTGATACTTCAGTTTTATGTGCATTGGAAGAAGCAAAGTTCAGCTACGAAGGTTTTATCTTTCCTCTTATTACAACTTCTGAGGGTGAGTTTGACAGCAATCTGGTGAGTTATTTGTTTCATTTCCATATAATATGTACTTCAATAACGTGAAAAAGAGCCGTTGAATTTTGATCAAGAGGCACTTTGACTTAGTTGGATCTTAGTTGTAGGTGTTTTCATCGCAATATAATCAACCAACCGTTTGAAGTTATGTGTTTACTCATTTTCACTTTGACCAACTTCTTGATCAATTATTTTGCTCATCATCCAAGCCCCCCATATAGAATTTCTGAGTAATTGGAAGTCGCTTTAGATGATGAGGCCATAGGAACGGGTGCATCATGACATCGTAAGATATTTTGTCTTAATGAATTAATTGGTACTAGAAATGCTGGAACAGTCGATGACTGCTTAGTCTCATTCGAGAGTCTATTCTCTTTGTATTATATTTTCCGAGGGGGTGGATTTGGGCTCCTTCCCGTCCATTGTATAATTGCGCAGGAAGGTATCACGTGCCTTTTGTCTCATGCATCTAACCTGCTTACGGGTTCACCTGTTTTAGTCATTTATGAAGTATTAGAATTGCAAAATAGGCATTGCCTTTGGTTTCATACTCTATCTACAAATACGAGAATATCCCATTTTAGGTCTAAGTAACATATAATTGAAGGAGATGGAAGACCTCCAATGTCAACTGTCAAATGTTTTCATTTCTATAATTGATTTAGACATTTCTGTATAGATAACAAATCTATTTATAACTGTTCTCTTACAACAGAGAGATTTAATGGTGGTTCAATAATTACGGGATAGAATTGAATTTCCCACGTTTGTGGAAGGATTACTATTTGAGGACTAATTTCCCAGGCATTCAACGGCATGTGCTTGTGCCTCACATTGAGCTCTATATATCCCTTCCCCACTGCACTCCATGCCTTTACCTTACTAGCTTATTTCTGATGGCTTTGAACGACACTTTCTATGTATCCCATGGATCCCCAACGCTAACCATCGACGATGGCATCGAAGCAAGGCACTTCTTCAAATCATGGAAGGACAAGGTTTTTCCCCAAACACCCAAAGCCATTCTTTTTGTCTCTGCCCATTTCGACACCGCCTATCCCACCGTCAACGTCGTTTCTGGCCCCAACGACACCATCTACGACTTCTATGGTTTCCCCTCCTCCATGTACGAGTTAAAATATCCAGCACCAGGAGCTCCGGCATTGGCGAAGAGGGTGAAGGAAGCTCTGATGGGGGCCGGGTTCGAGCGGGTGGACGAGGAGAAAGGGCGAGGGCTGGATCATGGAGCATGGGTTCCTCTGATGTTCATGTATCCAGAGGCAGACATCCCAGTTTGCCAACTTTCAGTACAATCACGCCTAAATGGGACACACCATTACAACATGGGCAAGGCATTGGCCCCTCTTAAGGATGAAGGGGTTCTCATTGTTGGGTCAGGAAGTGCCACACACAACCTTAGGACACTCGACCGCCACGCCAGGTCTTCTGTCAACGCCTCATGGGCCATCGAATTTGACGATTGGCTTAAACATGCTCTCCTTCAAGGAAGATACGAAGATGTGAACGAGTACAAAAAGAAGGCTCCAAATGCAGAAAAGGCACATCCAAGTCCCGACCACCTATTTCCGCTCCATGTCGCGATCGGGGCAGCCGGAGGCCACCCCAAAACGAAGCTAGTCCACCATAGCTGGGACCTTGGCACCATGTCCTACGCCTCCTACCAGTTCACAGCCTCTTAAACCCTAAACCCACTAATCGCATCAACATTACAAACCTCCAACTCTTCTAGTTGCCTTGTATCTTTGTTAATATAATGGAGTATGTTTGTAAAATGATCCTATTTATTTCTGTGACAAACCATATAATTTGGTTTTGGTTTATTACAACGTTGTAT

Coding sequence (CDS)

ACCTGCATTCATATTCGAAGTGGATCCGTGCTTGTGTATTCGAAACCATTCCAATCGGATTTCCTCAGAATTAGGGCTTCAGGGTCGAATCGCGAGTCTCGTTGCGTTCTCTTCAAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAACCATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAGACAAGCACAGTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGACTTGCTGTTCTCGTACAACATTGCTGTTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCAGCAAGTGTGGGGCTTAAACTTCCGGAGGTTTATCAACCCTGA

Protein sequence

TCIHIRSGSVLVYSKPFQSDFLRIRASGSNRESRCVLFKVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLLNSDLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP
Homology
[Close]
BLAST of Cp4.1LG10g12270 vs. TrEMBL
Match: A0A0A0L9E2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G645910 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.9e-40
Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 1 

Query: 39  KVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLL 98
           +VAKVYRQLLKAVK H+GKEE+KKHFVDYVAQKFR+ S +SKPHS+QQ+IKLARDYTFLL
Sbjct: 7   QVAKVYRQLLKAVKKHVGKEESKKHFVDYVAQKFRDKSILSKPHSIQQEIKLARDYTFLL 66

Query: 99  NS-----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
           NS     DLLFSYNIAVDRSDEMKR+LGKSAASVGL LPEVYQP
Sbjct: 67  NSVHHQKDLLFSYNIAVDRSDEMKRVLGKSAASVGLSLPEVYQP 110

[Close]
BLAST of Cp4.1LG10g12270 vs. TrEMBL
Match: V4TI91_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033129mg PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.6e-35
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 1 

Query: 37  LFKVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTF 96
           + + AKVYRQLLKAVKNHIGKE+ K HF++YV Q+FR+ S +S P S++QKIKLA DYTF
Sbjct: 5   IMQAAKVYRQLLKAVKNHIGKEDYKMHFMEYVMQEFRKNSKLSDPSSIRQKIKLAHDYTF 64

Query: 97  LLNS-----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
           LLNS     DLLFSYNIAVDRSDEMKRILGKSAASVGL+LPEVYQP
Sbjct: 65  LLNSVHHHKDLLFSYNIAVDRSDEMKRILGKSAASVGLQLPEVYQP 110

[Close]
BLAST of Cp4.1LG10g12270 vs. TrEMBL
Match: A0A067DNY7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033847mg PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.6e-35
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 1 

Query: 37  LFKVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTF 96
           + + AKVYRQLLKAVKNHIGKE+ K HF++YV Q+FR+ S +S P S++QKIKLA DYTF
Sbjct: 5   IMQAAKVYRQLLKAVKNHIGKEDYKMHFMEYVMQEFRKNSKLSDPSSIRQKIKLAHDYTF 64

Query: 97  LLNS-----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
           LLNS     DLLFSYNIAVDRSDEMKRILGKSAASVGL+LPEVYQP
Sbjct: 65  LLNSVHHHKDLLFSYNIAVDRSDEMKRILGKSAASVGLQLPEVYQP 110

[Close]
BLAST of Cp4.1LG10g12270 vs. TrEMBL
Match: A0A059BGX6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02800 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.0e-33
Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = 1 

Query: 39  KVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLL 98
           + AKVYR LLKAVK HIGKEE KKHF +YV ++FR+   +S P S+QQKIKLA+DYT+LL
Sbjct: 7   QAAKVYRHLLKAVKRHIGKEETKKHFAEYVTEEFRKNCVLSDPSSIQQKIKLAKDYTYLL 66

Query: 99  NS-----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
           NS     DLLFSYNIAVDR++EMKR+LGKSA+SVGL+LPEVYQP
Sbjct: 67  NSVHHHMDLLFSYNIAVDRTEEMKRVLGKSASSVGLRLPEVYQP 110

[Close]
BLAST of Cp4.1LG10g12270 vs. TrEMBL
Match: A0A0B0PPW3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_03738 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 6.9e-33
Identity = 78/101 (77.23%), Postives = 85/101 (84.16%), Query Frame = 1 

Query: 42  KVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLLNS- 101
           KVYR LLKAVKNHIGKEE KKHF  Y+A++FR+ S +S P  V Q+IKLA DYT+LLNS 
Sbjct: 11  KVYRVLLKAVKNHIGKEEYKKHFSQYIAEQFRKNSQLSDPSLVAQRIKLANDYTYLLNSV 70

Query: 102 ----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
               DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP
Sbjct: 71  HHHKDLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 111

[Close]
BLAST of Cp4.1LG10g12270 vs. TAIR10
Match: AT5G51960.1 (AT5G51960.1 Complex 1 LYR protein (InterPro:IPR008011))

HSP 1 Score: 122.1 bits (305), Expect = 2.7e-28
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 1 

Query: 41  AKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLLNS 100
           A+VYR LLKAV  H+GKE++K HF+D+V Q+FR+ +         +KI LAR+YT+LLNS
Sbjct: 9   ARVYRDLLKAVVKHVGKEDHKSHFLDFVKQEFRKNAN-------SEKINLARNYTYLLNS 68

Query: 101 -----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
                DLLFSYNIAVDR++EMKR+L KSAASVGL+LPEVY+P
Sbjct: 69  IHSHKDLLFSYNIAVDRTEEMKRVLNKSAASVGLRLPEVYEP 103

[Close]
BLAST of Cp4.1LG10g12270 vs. NCBI nr
Match: gi|449453377|ref|XP_004144434.1| (PREDICTED: uncharacterized protein LOC101204721 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-39
Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 1 

Query: 39  KVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLL 98
           +VAKVYRQLLKAVK H+GKEE+KKHFVDYVAQKFR+ S +SKPHS+QQ+IKLARDYTFLL
Sbjct: 7   QVAKVYRQLLKAVKKHVGKEESKKHFVDYVAQKFRDKSILSKPHSIQQEIKLARDYTFLL 66

Query: 99  NS-----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
           NS     DLLFSYNIAVDRSDEMKR+LGKSAASVGL LPEVYQP
Sbjct: 67  NSVHHQKDLLFSYNIAVDRSDEMKRVLGKSAASVGLSLPEVYQP 110

[Close]
BLAST of Cp4.1LG10g12270 vs. NCBI nr
Match: gi|567887378|ref|XP_006436211.1| (hypothetical protein CICLE_v10033129mg [Citrus clementina])

HSP 1 Score: 155.2 bits (391), Expect = 8.1e-35
Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 1 

Query: 37  LFKVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTF 96
           + + AKVYRQLLKAVKNHIGKE+ K HF++YV Q+FR+ S +S P S++QKIKLA DYTF
Sbjct: 5   IMQAAKVYRQLLKAVKNHIGKEDYKMHFMEYVMQEFRKNSKLSDPSSIRQKIKLAHDYTF 64

Query: 97  LLNS-----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
           LLNS     DLLFSYNIAVDRSDEMKRILGKSAASVGL+LPEVYQP
Sbjct: 65  LLNSVHHHKDLLFSYNIAVDRSDEMKRILGKSAASVGLQLPEVYQP 110

[Close]
BLAST of Cp4.1LG10g12270 vs. NCBI nr
Match: gi|702423380|ref|XP_010067265.1| (PREDICTED: uncharacterized protein LOC104454186 [Eucalyptus grandis])

HSP 1 Score: 149.1 bits (375), Expect = 5.8e-33
Identity = 74/104 (71.15%), Postives = 88/104 (84.62%), Query Frame = 1 

Query: 39  KVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLL 98
           + AKVYR LLKAVK HIGKEE KKHF +YV ++FR+   +S P S+QQKIKLA+DYT+LL
Sbjct: 7   QAAKVYRHLLKAVKRHIGKEETKKHFAEYVTEEFRKNCVLSDPSSIQQKIKLAKDYTYLL 66

Query: 99  NS-----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
           NS     DLLFSYNIAVDR++EMKR+LGKSA+SVGL+LPEVYQP
Sbjct: 67  NSVHHHMDLLFSYNIAVDRTEEMKRVLGKSASSVGLRLPEVYQP 110

[Close]
BLAST of Cp4.1LG10g12270 vs. NCBI nr
Match: gi|728847424|gb|KHG26867.1| (Uncharacterized protein F383_03738 [Gossypium arboreum])

HSP 1 Score: 148.3 bits (373), Expect = 9.9e-33
Identity = 78/101 (77.23%), Postives = 85/101 (84.16%), Query Frame = 1 

Query: 42  KVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLLNS- 101
           KVYR LLKAVKNHIGKEE KKHF  Y+A++FR+ S +S P  V Q+IKLA DYT+LLNS 
Sbjct: 11  KVYRVLLKAVKNHIGKEEYKKHFSQYIAEQFRKNSQLSDPSLVAQRIKLANDYTYLLNSV 70

Query: 102 ----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
               DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP
Sbjct: 71  HHHKDLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 111

[Close]
BLAST of Cp4.1LG10g12270 vs. NCBI nr
Match: gi|823133946|ref|XP_012466810.1| (PREDICTED: uncharacterized protein LOC105785311 isoform X2 [Gossypium raimondii])

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-32
Identity = 77/101 (76.24%), Postives = 85/101 (84.16%), Query Frame = 1 

Query: 42  KVYRQLLKAVKNHIGKEENKKHFVDYVAQKFRETSTVSKPHSVQQKIKLARDYTFLLNS- 101
           KVYR LLKAVKNHIGKEE KKHF  Y+A++FR+ S +S P  V Q+IKLA DYT+LLNS 
Sbjct: 11  KVYRVLLKAVKNHIGKEEYKKHFSQYIAEQFRKNSQLSDPSLVAQRIKLANDYTYLLNSV 70

Query: 102 ----DLLFSYNIAVDRSDEMKRILGKSAASVGLKLPEVYQP 138
               DLLFSYNIAVDRSDEMKR+LGKSAASVGLKLPEVYQP
Sbjct: 71  HHHKDLLFSYNIAVDRSDEMKRLLGKSAASVGLKLPEVYQP 111

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g12270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG10g12270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9E2_CUCSA9.9e-4083.65Uncharacterized protein OS=Cucumis sativus GN=Csa_3G645910 PE=4 SV=1[more]
V4TI91_9ROSI5.6e-3575.47Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033129mg PE=3 SV=1[more]
A0A067DNY7_CITSI5.6e-3575.47Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033847mg PE=3 SV=1[more]
A0A059BGX6_EUCGR4.0e-3371.15Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02800 PE=3 SV=1[more]
A0A0B0PPW3_GOSAR6.9e-3377.23Uncharacterized protein OS=Gossypium arboreum GN=F383_03738 PE=4 SV=1[more]
BLAST of Cp4.1LG10g12270 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51960.12.7e-2861.76 Complex 1 LYR protein (InterPro:IPR008011)[more]
BLAST of Cp4.1LG10g12270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453377|ref|XP_004144434.1|1.4e-3983.65PREDICTED: uncharacterized protein LOC101204721 [Cucumis sativus][more]
gi|567887378|ref|XP_006436211.1|8.1e-3575.47hypothetical protein CICLE_v10033129mg [Citrus clementina][more]
gi|702423380|ref|XP_010067265.1|5.8e-3371.15PREDICTED: uncharacterized protein LOC104454186 [Eucalyptus grandis][more]
gi|728847424|gb|KHG26867.1|9.9e-3377.23Uncharacterized protein F383_03738 [Gossypium arboreum][more]
gi|823133946|ref|XP_012466810.1|1.7e-3276.24PREDICTED: uncharacterized protein LOC105785311 isoform X2 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006725 cellular aromatic compound metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008198 ferrous iron binding
molecular_function GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0051213 dioxygenase activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g12270.1Cp4.1LG10g12270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35763FAMILY NOT NAMEDcoord: 38..137
score: 4.8
NoneNo IPR availablePFAMPF13233Complex1_LYR_2coord: 41..129
score: 1.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG10g12270CmaCh03G000050Cucurbita maxima (Rimu)cmacpeB654
Cp4.1LG10g12270CmoCh03G000150Cucurbita moschata (Rifu)cmocpeB606
Cp4.1LG10g12270Carg26104Silver-seed gourdcarcpeB0729
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG10g12270Wax gourdcpewgoB0095
Cp4.1LG10g12270Cucurbita pepo (Zucchini)cpecpeB085
Cp4.1LG10g12270Cucumber (Gy14) v1cgycpeB0468
Cp4.1LG10g12270Cucurbita maxima (Rimu)cmacpeB418
Cp4.1LG10g12270Cucurbita maxima (Rimu)cmacpeB656
Cp4.1LG10g12270Cucurbita maxima (Rimu)cmacpeB863
Cp4.1LG10g12270Cucurbita moschata (Rifu)cmocpeB803
Cp4.1LG10g12270Wild cucumber (PI 183967)cpecpiB067
Cp4.1LG10g12270Cucumber (Chinese Long) v2cpecuB073
Cp4.1LG10g12270Bottle gourd (USVL1VR-Ls)cpelsiB050
Cp4.1LG10g12270Watermelon (Charleston Gray)cpewcgB080
Cp4.1LG10g12270Watermelon (97103) v1cpewmB089
Cp4.1LG10g12270Melon (DHL92) v3.5.1cpemeB066
Cp4.1LG10g12270Melon (DHL92) v3.5.1cpemeB075
Cp4.1LG10g12270Cucumber (Gy14) v2cgybcpeB465
Cp4.1LG10g12270Melon (DHL92) v3.6.1cpemedB084
Cp4.1LG10g12270Melon (DHL92) v3.6.1cpemedB097
Cp4.1LG10g12270Silver-seed gourdcarcpeB0665
Cp4.1LG10g12270Cucumber (Chinese Long) v3cpecucB0077