CmoCh03G000150 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAAAAAAGTACACTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGTGCACCATCAAAAGGCAATACTTCACTTCCACTATTTAAAACTTTGTTCTTGTTCGAATAAAGAATTAGGCCTTGATAACCATTGTTGTATTTTTCATAGTTTCTTTAGAATGAATTTCGTCTTATATAACTTATAAGGGAACCTTCAGATTCTTAGTCGAATTTCAATAACAATTTTTTTTCTTGGCTTGAATTTCAAAAACATTCAACCCTTTGGCTATAGGTGGAAGTAGTGTTGACTAGTGGGGCCTCAGTAATCTTTTGTTTGGTTATGTGATTCATTCACTATAATTTTCTTTTACAATGTAGATTAATTTGTAGTCCATTGAGGATTTGACAAATGAGGACTTGTTAATGGCCTTAAGTCATAATTTTCATTAATCTAAGTACGACGTATAATATAGATACTGTTTCATTAGGTGGTTTATCAATCAATTTGTAGATCTTCAATGCAAGATTTGATGGGGAAATTAGGTGCTTCTTACGTTCTACTATCTGCAATTTCGGAGTAATGAGATATTCAAATTCTAGCAGAAGACACATTATAGCTCAGAATCAAGAATAAATGAACTTCTGCTTCGTTTCCTCATTTGATGTTTGTTAATCATTGTAATTTTTATTGGTTATGTATGTTCAGGACTTGCTGTTCTCGTACAACATTGCTATTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCAGCAAGTGTGGGGCTTAAACTTCCGGAGGTTTATCAACCTTGACGCCCTGTGGTTGTTTTATTAAGCAGAATTACTTTGTTCCTCCTAAGAAAAGAAGAATAATGACTTCGATGAGCTGCCCCTGTACCAGCAAACTTTAATATTGTTGATCTTCTACCATCTGATACTTGAGTTTTATGTGCATTGGAAGAAGCAAAGGGCAGCTACGAAGATTTTATCTTTCCTCTTATTAGAACTTCTGAGGGTGAGTTTGACAGCAATCTGGTGAGTTATTTGTTTCATTTCCATATAATATGTACTTCAATAACGTGAAAAAGAGCCGTTGAATTTTGATCAAGAAGCACTTTGACTTGGTTGGATCTTAGTTGTAGGTGTTTTGGTCGCAATATAATCAACCAACCGTTTGAAGTTATGTGTTTAGTCATTTTCACTTTGACCAACTTCTTGATCAATTATTTTGCTCATCATCCAAGCCCCCCATATAGAATTTCTGAGTAATTGGAAGTCAGCTTTAGATGATGAGGCCATAGGAACGGGTGCATCAGGACATCGTAAGATATTTTGTCTTAATGAATTAGTTGGTACTAGAAATGCTGGAACAGTCGATGACTGCTTAGTCTCATTCGAGAGTCTAATCTCTTTGTATCATATTTTCAAAGGAAAAAAAAAAAAAGAAGGGGATGGATTTGGGCTCCTTCCCTTCCATTGTATAATTGCGCGGGAAGGTACCACATGCCTTTTGTCTCATGCATCTAACCTGCCTGTTTTAGTCATTTATGAAGCATTACAATTGAAAAATAGGTATTGCCTTTGGTTTCATACTCTATCTACAAATACGAGAATAACCCATTTTGGGTCCAAGTAACATATTATTGAAGGAGATGGAAGACCTCCAATGTCACCTGTCAAATGTTTTCATTTCTATTAATTGATTTAGACATTTCTGTATAGATAACAAATCTATTTATAACTGTTCTCTTACAGCAGAAATTTAGTGGTGGTTCAATAATTGCGGGATAGAATTGAATTACTTCCCCACCTATACCAGAAGTAAAAAGCGATCTCACGTTTGTGGAAGGATTACTATTTGAGGACTAATTTCCCACGCATTCAACGGCATGTGCTTGTGCCTCACATTGAGCTCTATAAATCCCTTCCCCACTGCACTCCATGCCTTTACCTTACTAGCTTATTTCTGATGGCTTTCAACGACACTTTCTATGTATCCCATGGATCCCCAACGCTAACCATCGACGATGGCATCAAGGCAAGGCACTTCTTCAAATCATGGAAGGACAAGGTTTTTTCCCAAACACCCAAAGCCATTCTTTGTGTCTCTGCCCATTTCGACACCGCCTATCCCACCGTCAACGTCGTTTCTGGTCCCAATGATACCATCTATGACTTCTATGGTTTCCCCTCCTCCATGTACGAGGTAAACATAAAAACCTTTAAACTTCAAACTAGACCTGCTAGCAAGTGTATGTTAGGAACCACGACTCTTCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGACTTTGTTTTTTGTTTCCCCAAAAAACCTCGTACTCATGGAGATGTATTTCTTACCTATAAACTCATGATATGATCAACTTCTTAATTAGCCGATGTGGGACACCTCTCCCAACAATCTCAACAGTTTAGGCATTTATATAATTTCAAGTTTTGAACTCTTTGAAAGAAACTTTCCAATATTGATAACAAGAATGCATAAATGACATGAAAAACAGTTAAAATATCCAGCACCAGGAGCTCCGGCGTTGGCGAAGAGGGTGAAGGAAGCTCTGATGGGGGCCGGGTTCGAGCGGGTGGACGAGGAGAAAGGGCGAGGGCTGGATCATGGAGCATGGGTTCCTCTGATGTTCATGTATCCAGAGGCAGACATCCCAGTTTGCCAACTTTCAGTACAATCACGCCTAAATGGGACACACCATTACAACGTGGGCAAGGCATTGGCCCCTCTTAAGGATGAAGGGGTTCTCATTGTTGGGTCAGGAAGTGCTACGCACAACCTTAGGACACTCGACCGCCACGCCAGGTCTTCTGTCAACGCCTCATGGGCCATTGAATTTGACGATTGGCTTAAACATGCTCTCCTTCAAGGAAGGTAATTTCACTTGCATGAAAATAATCTAATAGAAAGATATTATAAAAGATATTTGCCTATAATTGTGATATCTCACGTTAGTTGGGAGGAGAACGAAATACCCTAGCGTACAAAGGGTATTTCGTTAGTTGCATTTTTAAGCCTTGAGGAGAAACTTGAAAGGAAAAGTTTAAAGAGGACAATATGTGTTAGCGGTGGGGTTGGGCTCGGGTCGTTACAATAATAAAAGATCAATATGATATATATAGTAAACTATAATTCAATACTAAATATCCTTAACACCTTCAACCCGTCTTCTTTGCTTGTTTAGTTTAAATAAATATTTTTTGTTTGAGAATTAGAAGAATATTTGGTGTGGTAGATACGAAGATGTGAACGAGTACAAAAAGAAGGCTCCAAATGCAGAAAAGGCACATCCAAGTCCTGACCACCTATTTCCGCTCCATGTCGCGATCGGGGCAGCCGGAGGCCACCCCAAAGCGAAGCTAGTCCACCATAGCTGGGACCTTGGCACCATGTCCTACGCCTCCTACCAGTTCACAGCCTCTTAAACCCTAAACCCACTAATCGCATCAACATTACAAACCTCCAACCCTTCTAGTTGCCTTGTATCTTTCTTAATATAATGGAGTATGTTTGTAAAATGATCCTATTTATTTCTGTG ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAAAAAAGTACACTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGTGCACCATCAAAAGGACTTGCTGTTCTCGTACAACATTGCTATTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCAGCAAGTGTGGGGCTTAAACTTCCGGAGAAGAATAATGACTTCGATGAGCTGCCCCTGTACCAGCAAACTTTAATATTGTTGATCTTCTACCATCTGATACTTGAGTTTTATGTGCATTGGAAGAAGCAAAGGGCAGCTACGAAGATTTTATCTTTCCTCTTATTAGAACTTCTGAGGGTGAGTTTGACAGCAATCTGCTTATTTCTGATGGCTTTCAACGACACTTTCTATGTATCCCATGGATCCCCAACGCTAACCATCGACGATGGCATCAAGGCAAGGCACTTCTTCAAATCATGGAAGGACAAGGTTTTTTCCCAAACACCCAAAGCCATTCTTTGTGTCTCTGCCCATTTCGACACCGCCTATCCCACCGTCAACGTCGTTTCTGGTCCCAATGATACCATCTATGACTTCTATGGTTTCCCCTCCTCCATGTACGAGTTAAAATATCCAGCACCAGGAGCTCCGGCGTTGGCGAAGAGGGTGAAGGAAGCTCTGATGGGGGCCGGGTTCGAGCGGGTGGACGAGGAGAAAGGGCGAGGGCTGGATCATGGAGCATGGGTTCCTCTGATGTTCATGTATCCAGAGGCAGACATCCCAGTTTGCCAACTTTCAGTACAATCACGCCTAAATGGGACACACCATTACAACGTGGGCAAGGCATTGGCCCCTCTTAAGGATGAAGGGGTTCTCATTGTTGGGTCAGGAAGTGCTACGCACAACCTTAGGACACTCGACCGCCACGCCAGGTCTTCTGTCAACGCCTCATGGGCCATTGAATTTGACGATTGGCTTAAACATGCTCTCCTTCAAGGAAGATACGAAGATGTGAACGAGTACAAAAAGAAGGCTCCAAATGCAGAAAAGGCACATCCAAGTCCTGACCACCTATTTCCGCTCCATGTCGCGATCGGGGCAGCCGGAGGCCACCCCAAAGCGAAGCTAGTCCACCATAGCTGGGACCTTGGCACCATGTCCTACGCCTCCTACCAGTTCACAGCCTCTTAAACCCTAAACCCACTAATCGCATCAACATTACAAACCTCCAACCCTTCTAGTTGCCTTGTATCTTTCTTAATATAATGGAGTATGTTTGTAAAATGATCCTATTTATTTCTGTG ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAAAAAAGTACACTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGTGCACCATCAAAAGGACTTGCTGTTCTCGTACAACATTGCTATTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCAGCAAGTGTGGGGCTTAAACTTCCGGAGAAGAATAATGACTTCGATGAGCTGCCCCTGTACCAGCAAACTTTAATATTGTTGATCTTCTACCATCTGATACTTGAGTTTTATGTGCATTGGAAGAAGCAAAGGGCAGCTACGAAGATTTTATCTTTCCTCTTATTAGAACTTCTGAGGGTGAGTTTGACAGCAATCTGCTTATTTCTGATGGCTTTCAACGACACTTTCTATGTATCCCATGGATCCCCAACGCTAACCATCGACGATGGCATCAAGGCAAGGCACTTCTTCAAATCATGGAAGGACAAGGTTTTTTCCCAAACACCCAAAGCCATTCTTTGTGTCTCTGCCCATTTCGACACCGCCTATCCCACCGTCAACGTCGTTTCTGGTCCCAATGATACCATCTATGACTTCTATGGTTTCCCCTCCTCCATGTACGAGTTAAAATATCCAGCACCAGGAGCTCCGGCGTTGGCGAAGAGGGTGAAGGAAGCTCTGATGGGGGCCGGGTTCGAGCGGGTGGACGAGGAGAAAGGGCGAGGGCTGGATCATGGAGCATGGGTTCCTCTGATGTTCATGTATCCAGAGGCAGACATCCCAGTTTGCCAACTTTCAGTACAATCACGCCTAAATGGGACACACCATTACAACGTGGGCAAGGCATTGGCCCCTCTTAAGGATGAAGGGGTTCTCATTGTTGGGTCAGGAAGTGCTACGCACAACCTTAGGACACTCGACCGCCACGCCAGGTCTTCTGTCAACGCCTCATGGGCCATTGAATTTGACGATTGGCTTAAACATGCTCTCCTTCAAGGAAGATACGAAGATGTGAACGAGTACAAAAAGAAGGCTCCAAATGCAGAAAAGGCACATCCAAGTCCTGACCACCTATTTCCGCTCCATGTCGCGATCGGGGCAGCCGGAGGCCACCCCAAAGCGAAGCTAGTCCACCATAGCTGGGACCTTGGCACCATGTCCTACGCCTCCTACCAGTTCACAGCCTCTTAA
BLAST of CmoCh03G000150 vs. Swiss-Prot
Match: DIOXL_ARATH (Extradiol ring-cleavage dioxygenase OS=Arabidopsis thaliana GN=LIGB PE=2 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 2.4e-101 Identity = 175/265 (66.04%), Postives = 211/265 (79.62%), Query Frame = 1
BLAST of CmoCh03G000150 vs. Swiss-Prot
Match: DODA_BETVU (4,5-DOPA dioxygenase extradiol OS=Beta vulgaris GN=DODA PE=1 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 3.5e-92 Identity = 158/263 (60.08%), Postives = 205/263 (77.95%), Query Frame = 1
BLAST of CmoCh03G000150 vs. Swiss-Prot
Match: DOD1W_BETVU (4,5-DOPA dioxygenase extradiol 1 OS=Beta vulgaris GN=DODA1 PE=2 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 6.9e-88 Identity = 150/263 (57.03%), Postives = 202/263 (76.81%), Query Frame = 1
BLAST of CmoCh03G000150 vs. Swiss-Prot
Match: DOD1U_BETVU (4,5-DOPA dioxygenase extradiol 1 OS=Beta vulgaris GN=DODA1 PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 9.0e-88 Identity = 151/263 (57.41%), Postives = 202/263 (76.81%), Query Frame = 1
BLAST of CmoCh03G000150 vs. Swiss-Prot
Match: DODA_PORGR (4,5-DOPA dioxygenase extradiol OS=Portulaca grandiflora GN=DODA PE=1 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 2.0e-79 Identity = 145/267 (54.31%), Postives = 185/267 (69.29%), Query Frame = 1
BLAST of CmoCh03G000150 vs. TrEMBL
Match: A0A0A0KYZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G443120 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 1.3e-130 Identity = 220/267 (82.40%), Postives = 241/267 (90.26%), Query Frame = 1
BLAST of CmoCh03G000150 vs. TrEMBL
Match: I3SFC8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 4.3e-113 Identity = 195/266 (73.31%), Postives = 224/266 (84.21%), Query Frame = 1
BLAST of CmoCh03G000150 vs. TrEMBL
Match: I3S0X4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 9.6e-113 Identity = 194/266 (72.93%), Postives = 224/266 (84.21%), Query Frame = 1
BLAST of CmoCh03G000150 vs. TrEMBL
Match: A0A061DK69_THECC (Catalytic LigB subunit of aromatic ring-opening dioxygenase family isoform 1 OS=Theobroma cacao GN=TCM_001659 PE=4 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 4.4e-110 Identity = 190/267 (71.16%), Postives = 221/267 (82.77%), Query Frame = 1
BLAST of CmoCh03G000150 vs. TrEMBL
Match: G7KNT9_MEDTR (4,5-DOPA dioxygenase extradiol-like protein OS=Medicago truncatula GN=MTR_6g064960 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 1.7e-109 Identity = 192/266 (72.18%), Postives = 224/266 (84.21%), Query Frame = 1
BLAST of CmoCh03G000150 vs. TAIR10
Match: AT4G15093.1 (AT4G15093.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family) HSP 1 Score: 370.5 bits (950), Expect = 1.4e-102 Identity = 175/265 (66.04%), Postives = 211/265 (79.62%), Query Frame = 1
BLAST of CmoCh03G000150 vs. TAIR10
Match: AT5G51960.1 (AT5G51960.1 Complex 1 LYR protein (InterPro:IPR008011)) HSP 1 Score: 129.0 bits (323), Expect = 6.9e-30 Identity = 64/106 (60.38%), Postives = 84/106 (79.25%), Query Frame = 1
BLAST of CmoCh03G000150 vs. NCBI nr
Match: gi|659069420|ref|XP_008449742.1| (PREDICTED: extradiol ring-cleavage dioxygenase [Cucumis melo]) HSP 1 Score: 475.3 bits (1222), Expect = 1.1e-130 Identity = 220/267 (82.40%), Postives = 242/267 (90.64%), Query Frame = 1
BLAST of CmoCh03G000150 vs. NCBI nr
Match: gi|449453205|ref|XP_004144349.1| (PREDICTED: extradiol ring-cleavage dioxygenase [Cucumis sativus]) HSP 1 Score: 474.6 bits (1220), Expect = 1.9e-130 Identity = 220/267 (82.40%), Postives = 241/267 (90.26%), Query Frame = 1
BLAST of CmoCh03G000150 vs. NCBI nr
Match: gi|388501808|gb|AFK38970.1| (unknown [Lotus japonicus]) HSP 1 Score: 416.4 bits (1069), Expect = 6.2e-113 Identity = 195/266 (73.31%), Postives = 224/266 (84.21%), Query Frame = 1
BLAST of CmoCh03G000150 vs. NCBI nr
Match: gi|388491700|gb|AFK33916.1| (unknown [Lotus japonicus]) HSP 1 Score: 415.2 bits (1066), Expect = 1.4e-112 Identity = 194/266 (72.93%), Postives = 224/266 (84.21%), Query Frame = 1
BLAST of CmoCh03G000150 vs. NCBI nr
Match: gi|590709699|ref|XP_007048625.1| (Catalytic LigB subunit of aromatic ring-opening dioxygenase family isoform 1 [Theobroma cacao]) HSP 1 Score: 406.4 bits (1043), Expect = 6.4e-110 Identity = 190/267 (71.16%), Postives = 221/267 (82.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |