CmaCh03G000050 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAACCATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAAAAAAGCACACTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGTGCACCATCAAAAGGCAATACTTCACTTCCACTATTTAAAACTTTTTTCTTGTTCGAATAAAGAATTAGGCCTTGATAACCATTGTTGTATTTTTCATAGTTTCTTTAGAATGAATTTCGTCTTTTATAACTTATAAGGGAACCTTCCGATTCTTAGTCGAATTTCTTTTTTTTTTTTTGATAAGAGATTCTTAGTCAAATTTCAAAAACAATTTTTTTTTCGAACTTGGCTTGAATTTCAAAAACATTCAACTCTTTGGCTATAGGTGGAAGTAGTGTTGACTAGTGGGGCCTCAGTAATCTTTTGTTTGGTTATGTGATTCATTAACTATAATTTTCTTTTACAATGTAGATTAATTTGTAGTCCATTGAGGATTTGACAAATGAGGACTTGTTAATGGCCTTAAGTCATAATTTTCATTAATCTAACTACGACGTATAATATAGATACTGTTTCATTAGGTGGTTTATCAATCAATTTGTAGATCTTCAATGCAAGATTTGATGGGGAAATTAGGTGCTTCTTACGTTCTACTATCTGCAATTTCAGAGTAATGAGATATTCAAATTCTAGCAGAAGACACATTATAGCTCAGAATCAAGAATAAATGAACTTCTGCTTCGTTTCCTCATTTGATGTTTGTTAATAACTGGAATTTTTATTGGTTATGTATGTTCAGGACTTGCTGTTCTCGTACAACATTGCTATTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCCGCAAGTGTGGGGCTTAAACTTCCGGAGGTTTATCAACCCTGATGTCCTGTGGTTGTTTTATCAAGCAGAATTACTTCGTTCCTCCTAAGAAAAGAAGAATAATGACTTCGATGAGCTGCCCCTGTACCAGCAGACTTTAATATTGTTGATCTTCTACCATCTGATACTTCAGTTTTATGTGCATTGGAAGAAGCAAAGGGCAGCTACGAAGATTTTATCTTTCCTCTTATTAGAACTTCTAAGGGTGAGTTTGACAGCAATCTGGTGAGTTATTTGTTTCATTTCCATATAATATGTACTTCAATAACGTGAAAAAGAGCCGTTGAATTTTGATCAAGAAGCACTTTGACTTAGTTGGATCTTAGTTGTAGGTGTTTTCATCGCAATATAATCAACCAACCGTTCGAAGTTATGTGTTTAGTCATTTTCAGTCTTATTTGACCAACTTCTTGATCAATTATTTCCCCATATAGAATTTCTGAGTAATTGGAAGTCGCTTTAGATGATGAGGCCATAGGAATGGGTGCATCATGACATGTCTTAATGAATTAGTTGGTACTAGAAATGCTGGAACAATCGATGACTGCTTAGTCTCATTCGAGAGTCTAATGTCTTTGTATCATTTTTTCAAAGGAAAAAAAAAGAAAAAAAAAAGGTGGATTTGGGCTCCTTCCCTTCCATTGTATAATTGCGCGGGAAGGAATCACATGCCTTTTGTCTCATGCATCTAACATGCTTGCGGGTTCACCTGTTTTAGTCATTTATGAAGTATTACAATTGAAAAATAGGTATTGCCTATGGTTTCATACTCTATCTACCAATACGAGAATAACCCATGTATAAGTAACATATAATTCAAGGAGATGGAAGGTTCATATCAACCTCCAATGTCACCTGTCAAATGTTTTCATTTCTATTAATTGATTTAGACATTTGTGTATAGATAACAAATCTATTTATAACTATTCTCTTACAACAGAAATTTAGTGGTGGTTCAATAATTACGGGATAGAATTGAATTACTTCCCCACCTATGCCAGAAGTAAAAAGCGATCTCACGTTTGTGGAAGGATTACTATTTGAGGACTAATTTCCCACGCATTCAACGGCATGTGCCTCACATTCAGCTCTATAAACCCCTTCCCCACTGCACTGCATGCCTTTACCTTACTAGCTTATTTCTGATGGCTTTGAACGACACTTTCTATGTGTCCCATGGATCCCCAACGCTAACCATCGACGATGGCATCAAAGCAAGGCACTTCTTCAAATCATGGAAGGACAAGGTTTTTTCCCAAACACCCAAAGCCATTCTTTGTGTCTCTGCCCATTTCGACACTGCCTATCCCACCGTCAACGTTGTTTCTGGCCCCAATGATACCATCTATGACTTCTATGGTTTCCCCTCCTCCATGTATGAGGTAACATACTAAACCTAGCAAGTGTATGTTAGGAACCACGACTCTTCACAATTGTATGATATTCTCCACTTTGAGTCTACGCTTTTATGACTTTGGTTTTAGTTTCCCCAAAAGACCTTGTACTACTGGGGAGATATATTTCTTACTTATAAACTTATGATCAACCTCTTAATTAGCCGATGTGGGACATCTTTCCCAACAATTCTCGATAGTTGCATTTATAAATTTTCAAGCTTTGAACCCTGGAGGGAAACTTTCCAATATTGATAACAATAATGCATAAATGACATGAAAAACAGTTAAAATATCCAGCACCAGGAGCTCCGGCATTGGCGAAGAGGGTGAAGGAGGCTCTGATGGGGGCCGGGTTTGAGCGGGTGGACGAGGAGAAAGGGCGAGGGCTGGATCATGGAGCATGGGTTCCTCTGATGTTCATGTATCCAGAGGCAGACATCCCAGTTTGCCAACTTTCAGTACAATCACGCCTAAATGGGACACACCATTACAACATGGGCAAGGCATTGGCCCCTCTCAAGGACGAAGGGGTTCTCGTTGTTGGGTCAGGAAGTGCCACGCACAACCTTAGGACACTCGACCGCCACGCCAGGTCTTCTGTCAACGCCTCATGGGCCATTGAATTTGACGACTGGCTTAAACATGCTCTCCTTCAAAGAAGGTAATTTCATTTCCATTATTTATAATCAAATCAATTAAAAAGATATAAAAGACTCATGAAAAGATACCTATGAAAGATATTTGCCTATAATTGTGATTATCCTACCTTAGTTGGGGAGGAGAACGAAACACAATTTATAAGGTGTGTCAACTTCTGCTAGCCGACGCGTTTTAAAGCCTTGAGAGGAAGCTCAAAGAAGACAATATTTGTTAGCGGTGGATAAGAATCTACAACGCACTAGAATGCCCTTGTTGACGATCCTTTACTCCTTTACTAAATATCTTCAACACCTTCAACCGTGGTTGAAGGAAAAATCTCACTTATTCTTTGCTCATTTAACTTAAATAAATATTTTTTGTTTGAGAATTAGAAGAATATTTCGTGTGGGTAGATACGAAGATGTGAACGAGTACAAAAACAAGGCTCCAAATGCAGAAAAGGCACATCCAAGTCCCGATCACCTATTTCCACTCCATGTCGCAATCGGGGCAGCTGGAGGCCACCCCAAAGCGAAGCTAGTCCACCATAGCTGGGACCTTGGCACCATGTCCTACGCCTCCTACCAGTTCACAGCCTCTTAAGCCCTAAACCCACTAATCGCATCAACATAATTACAAACCTCCTAACTCTTCTAGTTGCCTTGTGTCTTTCATTTCAATGTTGTTCAAATGTACCATAATGTAGTATGTTTGTAAGGTCATCCTATTTATTTATGTGACAAACCATATATGGTTTTGGTTTATTAGAACGTTGTATGAACGTTTCTTGTCAATGTGACATATCACACAACACAATCAAAAGTAATAAGATCGAGAGAAGTAAAAACAAATCTGTATACGTGTATTGTTCAGTGATTTGAAATAGCACTACCATATTACGAGATCCTATGTTGGTTGAATAAGAG ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAACCATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAAAAAAGCACACTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGACTTGCTGTTCTCGTACAACATTGCTATTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCCGCAAGTGTGGGGCTTAAACTTCCGGAGTTTTATGTGCATTGGAAGAAGCAAAGGGCAGCTACGAAGATTTTATCTTTCCTCTTATTAGAACTTCTAAGGGATTACTATTTGAGGACTAATTTCCCACGCATTCAACGGCATGTGCCTCACATTCAGCTCTATAAACCCCTTCCCCACTGCACTGCATGCCTTTACCTTACTAGCTTATTTCTGATGGCTTTGAACGACACTTTCTATGTGTCCCATGGATCCCCAACGCTAACCATCGACGATGGCATCAAAGCAAGGCACTTCTTCAAATCATGGAAGGACAAGGTTTTTTCCCAAACACCCAAAGCCATTCTTTGTGTCTCTGCCCATTTCGACACTGCCTATCCCACCGTCAACTTAAAATATCCAGCACCAGGAGCTCCGGCATTGGCGAAGAGGGTGAAGGAGGCTCTGATGGGGGCCGGGTTTGAGCGGGTGGACGAGGAGAAAGGGCGAGGGCTGGATCATGGAGCATGGGTTCCTCTGATGTTCATGTATCCAGAGGCAGACATCCCAGTTTGCCAACTTTCAGTACAATCACGCCTAAATGGGACACACCATTACAACATGGGCAAGGCATTGGCCCCTCTCAAGGACGAAGGGGTTCTCGTTGTTGGGTCAGGAAGTGCCACGCACAACCTTAGGACACTCGACCGCCACGCCAGGTCTTCTGTCAACGCCTCATGGGCCATTGAATTTGACGACTGGCTTAAACATGCTCTCCTTCAAAGAAGATACGAAGATGTGAACGAGTACAAAAACAAGGCTCCAAATGCAGAAAAGGCACATCCAAGTCCCGATCACCTATTTCCACTCCATGTCGCAATCGGGGCAGCTGGAGGCCACCCCAAAGCGAAGCTAGTCCACCATAGCTGGGACCTTGGCACCATGTCCTACGCCTCCTACCAGTTCACAGCCTCTTAAGCCCTAAACCCACTAATCGCATCAACATAATTACAAACCTCCTAACTCTTCTAGTTGCCTTGTGTCTTTCATTTCAATGTTGTTCAAATGTACCATAATGTAGTATGTTTGTAAGGTCATCCTATTTATTTATGTGACAAACCATATATGGTTTTGGTTTATTAGAACGTTGTATGAACGTTTCTTGTCAATGTGACATATCACACAACACAATCAAAAGTAATAAGATCGAGAGAAGTAAAAACAAATCTGTATACGTGTATTGTTCAGTGATTTGAAATAGCACTACCATATTACGAGATCCTATGTTGGTTGAATAAGAG ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGTTTACCGCCAGCTTCTCAAAGCTGTAAAGAACCATATTGGAAAGGAAGAGAACAAGAAGCATTTTGTGGACTATGTGGCTCAGAAGTTCAGGGAAAAAAGCACACTTTCGAAACCCCATTCTGTTCAACAGAAAATCAAGCTTGCTCGCGATTACACATTTCTACTTAACAGCGACTTGCTGTTCTCGTACAACATTGCTATTGATAGATCAGATGAAATGAAGCGGATATTGGGCAAGTCTGCCGCAAGTGTGGGGCTTAAACTTCCGGAGTTTTATGTGCATTGGAAGAAGCAAAGGGCAGCTACGAAGATTTTATCTTTCCTCTTATTAGAACTTCTAAGGGATTACTATTTGAGGACTAATTTCCCACGCATTCAACGGCATGTGCCTCACATTCAGCTCTATAAACCCCTTCCCCACTGCACTGCATGCCTTTACCTTACTAGCTTATTTCTGATGGCTTTGAACGACACTTTCTATGTGTCCCATGGATCCCCAACGCTAACCATCGACGATGGCATCAAAGCAAGGCACTTCTTCAAATCATGGAAGGACAAGGTTTTTTCCCAAACACCCAAAGCCATTCTTTGTGTCTCTGCCCATTTCGACACTGCCTATCCCACCGTCAACTTAAAATATCCAGCACCAGGAGCTCCGGCATTGGCGAAGAGGGTGAAGGAGGCTCTGATGGGGGCCGGGTTTGAGCGGGTGGACGAGGAGAAAGGGCGAGGGCTGGATCATGGAGCATGGGTTCCTCTGATGTTCATGTATCCAGAGGCAGACATCCCAGTTTGCCAACTTTCAGTACAATCACGCCTAAATGGGACACACCATTACAACATGGGCAAGGCATTGGCCCCTCTCAAGGACGAAGGGGTTCTCGTTGTTGGGTCAGGAAGTGCCACGCACAACCTTAGGACACTCGACCGCCACGCCAGGTCTTCTGTCAACGCCTCATGGGCCATTGAATTTGACGACTGGCTTAAACATGCTCTCCTTCAAAGAAGATACGAAGATGTGAACGAGTACAAAAACAAGGCTCCAAATGCAGAAAAGGCACATCCAAGTCCCGATCACCTATTTCCACTCCATGTCGCAATCGGGGCAGCTGGAGGCCACCCCAAAGCGAAGCTAGTCCACCATAGCTGGGACCTTGGCACCATGTCCTACGCCTCCTACCAGTTCACAGCCTCTTAA MNSEALQVAKVYRQLLKAVKNHIGKEENKKHFVDYVAQKFREKSTLSKPHSVQQKIKLARDYTFLLNSDLLFSYNIAIDRSDEMKRILGKSAASVGLKLPEFYVHWKKQRAATKILSFLLLELLRDYYLRTNFPRIQRHVPHIQLYKPLPHCTACLYLTSLFLMALNDTFYVSHGSPTLTIDDGIKARHFFKSWKDKVFSQTPKAILCVSAHFDTAYPTVNLKYPAPGAPALAKRVKEALMGAGFERVDEEKGRGLDHGAWVPLMFMYPEADIPVCQLSVQSRLNGTHHYNMGKALAPLKDEGVLVVGSGSATHNLRTLDRHARSSVNASWAIEFDDWLKHALLQRRYEDVNEYKNKAPNAEKAHPSPDHLFPLHVAIGAAGGHPKAKLVHHSWDLGTMSYASYQFTAS
BLAST of CmaCh03G000050 vs. Swiss-Prot
Match: DIOXL_ARATH (Extradiol ring-cleavage dioxygenase OS=Arabidopsis thaliana GN=LIGB PE=2 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 2.2e-91 Identity = 163/265 (61.51%), Postives = 196/265 (73.96%), Query Frame = 1
BLAST of CmaCh03G000050 vs. Swiss-Prot
Match: DODA_BETVU (4,5-DOPA dioxygenase extradiol OS=Beta vulgaris GN=DODA PE=1 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 7.7e-81 Identity = 143/264 (54.17%), Postives = 190/264 (71.97%), Query Frame = 1
BLAST of CmaCh03G000050 vs. Swiss-Prot
Match: DOD1U_BETVU (4,5-DOPA dioxygenase extradiol 1 OS=Beta vulgaris GN=DODA1 PE=2 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 9.4e-79 Identity = 139/264 (52.65%), Postives = 188/264 (71.21%), Query Frame = 1
BLAST of CmaCh03G000050 vs. Swiss-Prot
Match: DOD1W_BETVU (4,5-DOPA dioxygenase extradiol 1 OS=Beta vulgaris GN=DODA1 PE=2 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 2.7e-78 Identity = 138/264 (52.27%), Postives = 188/264 (71.21%), Query Frame = 1
BLAST of CmaCh03G000050 vs. Swiss-Prot
Match: DODA_PORGR (4,5-DOPA dioxygenase extradiol OS=Portulaca grandiflora GN=DODA PE=1 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.0e-69 Identity = 133/266 (50.00%), Postives = 171/266 (64.29%), Query Frame = 1
BLAST of CmaCh03G000050 vs. TrEMBL
Match: A0A0A0KYZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G443120 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 9.0e-113 Identity = 198/267 (74.16%), Postives = 219/267 (82.02%), Query Frame = 1
BLAST of CmaCh03G000050 vs. TrEMBL
Match: I3S0X4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 9.7e-99 Identity = 179/266 (67.29%), Postives = 208/266 (78.20%), Query Frame = 1
BLAST of CmaCh03G000050 vs. TrEMBL
Match: I3SFC8_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 2.2e-98 Identity = 179/266 (67.29%), Postives = 207/266 (77.82%), Query Frame = 1
BLAST of CmaCh03G000050 vs. TrEMBL
Match: A0A061DK69_THECC (Catalytic LigB subunit of aromatic ring-opening dioxygenase family isoform 1 OS=Theobroma cacao GN=TCM_001659 PE=4 SV=1) HSP 1 Score: 364.4 bits (934), Expect = 1.8e-97 Identity = 174/266 (65.41%), Postives = 204/266 (76.69%), Query Frame = 1
BLAST of CmaCh03G000050 vs. TrEMBL
Match: G7KNT9_MEDTR (4,5-DOPA dioxygenase extradiol-like protein OS=Medicago truncatula GN=MTR_6g064960 PE=4 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 4.5e-96 Identity = 178/266 (66.92%), Postives = 207/266 (77.82%), Query Frame = 1
BLAST of CmaCh03G000050 vs. TAIR10
Match: AT4G15093.1 (AT4G15093.1 catalytic LigB subunit of aromatic ring-opening dioxygenase family) HSP 1 Score: 337.4 bits (864), Expect = 1.2e-92 Identity = 163/265 (61.51%), Postives = 196/265 (73.96%), Query Frame = 1
BLAST of CmaCh03G000050 vs. TAIR10
Match: AT5G51960.1 (AT5G51960.1 Complex 1 LYR protein (InterPro:IPR008011)) HSP 1 Score: 119.0 bits (297), Expect = 6.8e-27 Identity = 62/108 (57.41%), Postives = 81/108 (75.00%), Query Frame = 1
BLAST of CmaCh03G000050 vs. NCBI nr
Match: gi|659069420|ref|XP_008449742.1| (PREDICTED: extradiol ring-cleavage dioxygenase [Cucumis melo]) HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113 Identity = 199/267 (74.53%), Postives = 221/267 (82.77%), Query Frame = 1
BLAST of CmaCh03G000050 vs. NCBI nr
Match: gi|449453205|ref|XP_004144349.1| (PREDICTED: extradiol ring-cleavage dioxygenase [Cucumis sativus]) HSP 1 Score: 415.2 bits (1066), Expect = 1.3e-112 Identity = 198/267 (74.16%), Postives = 219/267 (82.02%), Query Frame = 1
BLAST of CmaCh03G000050 vs. NCBI nr
Match: gi|388491700|gb|AFK33916.1| (unknown [Lotus japonicus]) HSP 1 Score: 368.6 bits (945), Expect = 1.4e-98 Identity = 179/266 (67.29%), Postives = 208/266 (78.20%), Query Frame = 1
BLAST of CmaCh03G000050 vs. NCBI nr
Match: gi|388501808|gb|AFK38970.1| (unknown [Lotus japonicus]) HSP 1 Score: 367.5 bits (942), Expect = 3.1e-98 Identity = 179/266 (67.29%), Postives = 207/266 (77.82%), Query Frame = 1
BLAST of CmaCh03G000050 vs. NCBI nr
Match: gi|590709699|ref|XP_007048625.1| (Catalytic LigB subunit of aromatic ring-opening dioxygenase family isoform 1 [Theobroma cacao]) HSP 1 Score: 364.4 bits (934), Expect = 2.6e-97 Identity = 174/266 (65.41%), Postives = 204/266 (76.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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