Cp4.1LG10g12220 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG10g12220
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionE3 ubiquitin-protein ligase CHFR
LocationCp4.1LG10 : 9315980 .. 9329239 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCGATACAATTAGTCGATAAATGCTCCCACGTCGTAGTCATCAGCCGTTTACTTCACCTTCCTCCGCACGCTTCACAATTCTGCGTCTCTATTTATATTCGTAAAATTGTTTCATTTCAAGTTCTCAGAATCAGCAACATACTGGCGGTTATGGCGGAAGTTGGAGAGTGCTCTGCTTCAAATTCCTCCATACAAAACTGGGCGAAGCTAAGTATGTTTCCCCCTCTCACTTTGTTCTTCTCGGTATCTCTTTTCTTGGACTGATCCGATGCCTGTTCCGTCTTGCATTATTGGATTCTCTGTTTGATTTGCTTCTGCTCAGCGCTTGAGAGTTGGACAGTTTTGAAAACATAATCGTTCCATTTTTTGCAAGCAAAATTTGTTGCTATTCCAAATAAATGTTCTTTTGGGTTGAAATTATTCGGGAAGACAATGTAATTTGAGGAAATGATTTTTGGTGGAACGAGCAAATGAACTAGGTTTAGCGTTCTTGAAGGTCGATGATTTATTTGTATCTGATTTACTTCGATTTCGTGAATTGTTGGCAGTATGAGTTACAGAGATCAATCTCATTGTCTCACTAATTTTTCTATCGGTAGACAGTATAAGAATTAAGGAATTACTATTTTGGTGAAGATATACAAGAGGAAGAGGAGAGTGAACCTTTCTCCCCAATTAAACGATCATAAAATTGTTACAAGATCATACCTGCAAGGAACACTATCTAGCTACCAAAAAACGAATAAAGTGCTCAAAGTCTATGTAACCTCTCTGAATTTATGGAAATTATTACTTTAGACATTGTCTCGAGACATTCCCATACCTCATGGAAATTATTACTCTAGACATTATCTCGAGACGTTCCCATACCTCATGGAAATTATTACTTTAGACATTATCTTCTATGATGGAGAGAGAATTAGGGAAAATAATGGTTAATTCATTTTTAGTTTTCTATTTAGAGCTTAACTCTCTTTTTTAGTTTCTTTTGAGTTTAGTTTGCTTTTAATTCTCTGTAAATAGAGATATATTCTTCACAACTTTCATTCTAATAAAAATTCTAGACTTGATCCTTGTAGATTTCTCTTTTTAGTCACTTGATCATGGATTTGCATGAAAGAAACTTGATGGATTGAAGATATCATTCTTGAACATTTTTGTCATTTCTTAGATGATTTCGTTTTAAGAAACACTTCTTTCAAATTTTTATGTTGGTAATGTACAATTTCAATCTTTTTCTGAAAGGAGACACAAAACGTTCATTGACAAAATGAAAAATTACATATTAGATGTTGGCAAGCAGAATGGTTATTAAGTCTTTCATGGCGTAAAATGCAAACAAGAGGAGAAAGTACTCAAAAGCTTAATTTATTACAATCTTCTAATTTAAAAAAAAAAAAAAAAAACTATTGCAATCTAAATTGGCATTGTTTTTGGAAATTAATTTGCTATTTTATTTTATTCTTTTCCAGTTTCACTTGATAAAAAATACGCAGATATTGAGATAAACTCGGATGAGGCTGTTATCTTCTCAGAGACAAAGTCCTCATCTGTTGATAAGTATGAATGGTGCAAAATCACAAGGAATTCCGATGTAAACTCTATCACTTTGCAGAATAGAAGGTAATATGTTGTGGCTACGAAGTAATTAGTATTAAAATCAAATTATATTCTTATCCCATAAATCAGAGCCTCCATGCAGTTTGGTGTAGGTATTTTAAGATTTTTTATATAATGGTAAATCTTAAGAAAGATCTCCACTTTTACCATTAGAGACTCTCGTGGAGCTTTTATATCAAAGTTTGGTGTAGAGAACGGCTTAAAGTTCATGATTTTTCACTGATGTCAAGGATTATAGGGGTAGTAAGACCATGGGATTTAAGATAAAAATTTAGCCCAAATTCTTTACTGTAGTATCTAGGTGGATTGTTATTGAGAGAATTTTGTTTTTTTTATACGTATATATTCGTACATATCTATATATATATATATATACATACATAAAAATATTTATTGTTTTACGATCTCCCTCTCTTTGTCTCTCCTTTTCTCTTGCCGTATGTTTTATCTATTGTGTTTTGGGTGCTATAGTTTCAATGCTATTCTTGTTGATGAGACTCTTGTTCAAAAGGATGACATTGCTTTCATCAAGTGTGGAAGCGAAATTGTTTCTGGTTCGGTCCGAGATGGTTAGTATTTTTTCAAACTCTTGTGTGAAAGAGAAAGTTTAACGTGATGGATGAATTAGAATTATTTGTTTTCAATTTATTGAAATATAACAGGATGAAAGTTCTCACTAATTTGTTATATGAAAGTAAATTGTTTGTCATGCTAGTATATTGTTTACCGTGTTAGTATTTAATGTGCATAACTCGCGTTTGCTAAGATTTTTCCTTGTATATTTGTACTTTTTTTTATTTCTTTTCATATAGGTCTAGATTGATAGCTTAATGCTAGCATATATGATTGATAATTGTTCTATCTAAATTTATCTTTCACATCACTCAAAAAATGAGAAGTATTCTAGCAAATATTTTTGTAATCGTTTTGTATAAATTTGAGTCTTTCACATCACTCAAGAAACAAGAAATACTTTTCTCTCATACATAGCTTCACATTCATCAATACATTTCCTAAGTTTCCACTTTAAAAAGATACCATAGCTTTACAACACACTGATCCATTGAGAACTTAGCTTTACCACATAAGTATAATGAAAGAATAGATGAGATTGGTTTTCTACAGCTGAAAGGCAAAGACTGCAAGCTGATTGTTTTAATATTAAGTTGTTTTTTAACTTCACAAGCCAAGTCACTATATTGATTTTTCTTGGGCTCTTTGACTTAACAAAACTTATTCTTTTGTTCTTTTATATTAAACTTACTAATTCTTGTTATTTAAGCCGATTGGAGAATATATTATCCTCACCTTTGGTTTGACTTTGAATATTTTTTAGAATTTTTTTCTTATTCAAATATTCCCATAGATAAATACAAAATGTAACTGCACAAATATATTTTCTTTGTGGTTTGATTGAAAATGGAAAACTATCTCAGGTAAAAGCTTTTTCTTTGTTGAATTATTCCATTTTAATCTTTATGGAACTATTCAATTTTAATCTTCAGGGCATTTGAGCTATAAATTTGAAATCTTGTCAGACTCAAGAATATGCAAGGGCTTAAAGGTGATTGGTTAATTGTCATGTTTTGATTATCTAAATGTGCTATTAGCTTTCACCAATTGTTTTAGAAATACTCAATTTTAGCATCTGTTGAATTTGTCCAGATTTCTATGGATGTTGAACACGCAAAATGCAGTATTTGCTTAAACATTTGGCATGATGTTGTCACAGCTGCTCCTTGCTTTCACAACTTTTGGTAGGGATATTTATTTGTTTCTAGCTGGTTATTTCACCTTTTAATTTAGGTGTTTTCATTGAATTGTAATTGGTCTACAGCAATGGATGCTTCTCGGAGTGGTTAAAAAGATCCCAAGAGAAGCGTACAAGTGTACTTTGTCCCCAGTGTAGGGCAGTTGTGCAGTTTGTTGGAAGAAACCACTTCTTGCTGAACATTGCAGAGGTAATATCGTACCAAAGCATCTAAGTGAAGAAAAATGTTATTTGGTTTGCAGGATTTTGTCATAGAAGTATATATGTCTTGTAACACTTTTTTTTTTGCTGTATGAATTTTATGGGGATTAGTTTTGATTTTTGGGTTGATTAAAGGGTTGTATGAATTTTATGTAGTTGTTAAACAGAAACTTCAGGTTTTAGGAAAAAAAAAAAAAAACTGTAGTAAAGTTTAAAAGGGGAAAGCTTTAGAACTCACTACAGCACTTTAGATATCCACCAAGGGTTTTGGACTTCAATCTACAAGAAATATCTTTAAGGGTACTATTGTGTTTGGAGAGGAGTAAGGAGAAGACTTATCATAGAGACGTATTCTCTTTTTTTTTTGCCCCTTGAATGAAGGGCTTATTTCTCAATTCTCAACATTATTCTTTTCTCCTGGTGCAAACTTTTTTTTATTATTTATTATTTAATTTTATTGTCAAACAAAGGAAACAGTTCTTCATGTTGTGATGAAGAAAATTTTCGTAAGTGAAAGATCTCAATTCCCCTCAATGGAGGATGGCATAAAAGATTAAAAAATCCCAGTTTTAGTTAATTACGATTGGGGAGAGGATTTACGAAATTGCATTTGAAATTGAACACCAAAGTAGAGCAAGTATATATAGTAAGACCGCAACCTTTCTTTTACCGTCTATAAAGAGTGGATTTGATAATTTTGGCTCAAGCATCGGTGTCAAACATGCACACACATGGCTAATTAGCATGTCAAAGTTTTATATACTTATTTTTAATTATGACACTTGCACAGAAATGTCATGACACACTTATAACACGTATCAAACATGTGAATTAGTAAAGTAGTGTACTTGTGTTAGACACTATTTGTACAAAGTGATTATGAGCCCAACATCTGTTAGAAGTCATATTAAACACTTATTAAGCATAATAAATAAAAACACAAGTGGTAATATAGGACAAACCTATTAAATTTTGAGAGTGATACTTCAAACTCAATTTTAGGCATATCAATGTATTAACTCATTGACATATGAAGGTTCTTGTATAAAAATGATATATATTATAGTAAATGTATCCTTATCCTAAATGTTTTTAAAAAATGACGTGTGACCTAGTCCATGTTGTGTTCATCTATGTCTCGTTGTGTCTCGTATGTGTATCTATGCTTCTTAGCAGTCTGCTGCCTAGCGTCCCAGGGAAAGGAACTCTTTAAGCTATTTCTGCCAAACCATTTTTCTTCCCAGATGGAACCTTCATCCCCCAACTTTTTTCAGAAGGGAAGAATATATCTCATCTGCATTCTAATTTTCCCAACAACTCTTATTATTGTTTCCCATAATTTGTTTGATACTCAACCTGTACTCATCCTCATTAGCTTTAAACTTTTTGTAAAGTATATGTGAGGGTACTAATAGGGGATATGTTGGGAATACTAGTAGGATATCAGTAAGAACATAGTGATAATTGGCTAGGGGTGACTTGGTTATAAATGTAGAGAGCTTGGGATCTTAGAAGGGGGGGAATTATTTTGGGGAGGTTACAATACAGTTATTTTGTTGTATCTTGTAACCGATATCCTAACAGGATAAATATGGTTGATTTCCTAATTCCCCTGCATCAGTTCAGCAATTCTATAAACTTTAATCCCTGTTATACTATTTTTTTTTTTTCTTATTCTTTTCAGTTCTATCTCATAACTGATTGGCTGCTTGTTTTGTCTAGACTATATTGCAAGAGGACTCTTCCCTTAGACGTTCAGTCGAAGAAATTGCTATTTTGGATTCTTGTTCATTAATACAATCAAATCTGGTAAGTAATCTTATTTTTTATCATACTTGTGTATTGATGTTATGACAACGATAGGAATGTCAATTTCTAAATTTTTAGTATTGACTTAAGGGAAATCTCCAACTGTAGCAAAAGAGAACTATTTTTTATGGAATGGCAGGGATGTGAATATCAGTGTAAAAATATTTTTTTACCTGGGGGAGGATGTGATTGTCAACATTTTAAGCAAGGTCAAAGGTTTTATGCTTTTCGTGAATTACAAGTGATATATATGCCTCTTATAGAATTTACTCAAGGGCTGGAATTGTTGCACTTTGGGGAATAGTTAGAATGGTAATTTCAATTTGCTGTATATTCTTTAAAAACATAGATTCTTCATTTTCTTTGTGGTCCGGTTCTTCCGATAAAATCGAAGTTATTGTTGGATATTGCTTCCAAAGCCAAGTCACCTTTATATAATCATTTTTAAAACAAATTTTACTTACAATTACAGCAAGGAGATGATTAAAATCCAATGCACTAAAACTTATTCAACAATGTGGTTCAAAATGTATTAATTTTTGTAAATTTGGACTTTAAAAGTTTTATGCTCTGGTTTTTTGTAATAAGAAACAAGGATTGTACTTCAAAATAGAATCATTGTACTAAAAAGGTGGAGAGGAATCACATCTCGAGAGGTAAAGGGTAAGGTCTTAGAGGCTTACTAGTGTATAGAGACAAGTTGCCTTTATCTCTTTTCAAGTTTGCTGACAACACCGCTTTAACGACACTCTTTTTCTACCTAGGGAAGAAGGAGTCTTATTAATCTAAACTGCATTATGTTTGTTTTAGACTTTTTCAAGGTTGAAGATTAATGGGGTAAATGTTTGTTGTGGGGGTTTACTGTGATCCTTCTAAATTAAGTAGGTAGGCTTCTTTGGTGGGTCGTGGGGTCTGGACCTTTCCATCAACTGAATGGGTCTTCCTCTTGGCCACAATCCTACACTTGGTATGTTTTGGGATCCTGTAGTGGAGAAAGGTCACAAGCATCTCTCCTATTGGAAAAAAGAGTTTTTTTCAAAGAAAGGTAGACTTAACCCTAATTCAGCCAGTTGCGAGGGATCTCAATGTTCTCTTTATTTAGGATTAAGGTGCCGATATGTAAATCCTTAGAGTATGAGGGACTTCTTGTGGGAAGGGTTAATGAAGGAAAAGGGTCTCACCTAGTGAACTAGTGTGTTGTGAATAAGTTGATGGTGCTCAAGGGGCTAGACATAGCTAATCTTAGCATGCAAAATGAAGCCTTTTTGGCTACATGGCTGTGGCGCTTTCCCAGGAGTCTAGCTTCCATTGGAAAAAGATTATTGTGAATAAATATGGTCTTCACCCTTTTGAGTCAATCTTGAGTGCAGTTCTAAAAGGCACTTCCAGATTGATTATGAGAAAGTTGCCTTGCTTGATAGGACTGCGATATTTGTATCTGTTGTAAGGGAGCAACTATGGACCTCAAACATCTTTTGTGGTCTTGTGATTACATGTGGGCAGTCTGGACTTGTTTCCTCCAGTCCTTTGGTCTCAACTTGGTCCAACCTAGAGAGGAATTTTTGCTTCATTCATCCTTTAGCAAAAAGGGTCACTTTTGTGGCTCTCCGACATTTGTGCTTTGTTATGTGGTTTTTGGGACATTTGTGCTTTGTTATGTGGTCTTTGGGGTGAGAGGATCAATAGAGTTTTTAGAGGAGTAGGGAGGTCCTAAGAAGAAGTTTGGTCCCTTGCTAGGTTCCATACCTCCCTTTCGGGCTTGGTGTGTAATGACTTTTGTAATTCCCCTTTAAATACTATCATCCTTGATTGGAGCCCTTTTCTTTATTTCGACTCCTTTGGGTTTGTTTTTTTTGTATGCCCTTGTATNAAGTATGGTTTCTCTTACCAAAAGAAAAAAGAAAAAAAAAAAAAGAAAGAAAACCCCTTTCTTAAAAATCTTTACAAAGTGAAGTTTCTTAAAACATTCTAGGCTTTTTTACATAGTTTTTCCCTACAAGATATATGTTTAAATAGGGACGCTCCTATATTTCCGTAGTCTTTTTTGCAAAATAAAGAACTGAAAGATGTTTTCAGTTAAAATCTTAGTGTATTTCTATTTTCTTTTTCCTTTTGTTTAGTTGTAATGATTTTCCCTTACAACCTTGAGGTGAAAATATTTCTCGATAAAAATCCCCAAGTAACTTCAGAGTTTACTGTCTTGACTCTTCAAAATTTTATTGCTTAATTATGATTAGTTGTCATTTTATGTAGCTTGCTCTTTGATTTTTTTGGTCTCGTTGTGCTTTTACTCCTTTTCTGCCCTAGTAGAAAATTGGAGGATTTGGGATGTTTATGCTCCTGATTTAAGATGGAAGAGCAAAGATTTGAAAAAAGAAACCATTATGCCCTTTCCTACAAAATTTTCATTGATAGTAGGTGAAAACTACGTATCATAGATAGTCTAAAAGAGAGAAAATTCAGGAACCACCAAATTATTGATATTTTCCCCCTTAAAGAGAACTGCCAATAACTGATTTTGGACAGGATGGATAGTTCTGGAAAGAGGTTTTGGAATAAAGATGCACCATTCCAAGAATATTCTTAAAGGGGAAGAAGTTGTAGACCATTTCTTGAAAATTTCCATACAACAAGAGAATATGAACTATTCATACAATTTAGAATCCCAACCTTTTGTTACAGACACGTTTTCTTTTAATACAATATACTAAAAAGGGAAGATCACAGGAAAATCAACATAACTTGACTAGTTAACCAAAACAGCGGGTTCTGGAGGACCAAATGAAATCCATGGAAAATTCCAGCATGTATCATATTAGTTATCACAGAAACAAAAGGATAAAGAGGTGCCCTTTTGGTAATTGATGTGGGAGTTCAGAAAGTTAAGGATCTCTCGACCTAACTTAGGTTCTCTAAGCCGTTAATAAAATAATATGGAATGCTACCCCAATTTATTTAAATCATCTCTAAGCTGTTGAGGGGTAGGCCGGATGGGAAGCCCAGATAGGAATGCCTAAAGAGGACAATATCTACTAGTGGTGGGCTTGGGCCGTTAATCTTCTACAGTAGGTTCTTTTTAAATTTGGCTTCGGAAGATCCAGATAGTTTCCTCTCTAGCCCTTTGCTTTTGGTTTGTGGTGTAAATTTCTTCAAGCTGTCAGTGTCAGCATCTCCCTCTTTTCGTTGGAGATGGGTTACTTTAATCCAAAATCCTCATAATTCTTTTGGATACGTGATCAGAGTAATTGGGGTAGTTTTGAGATTAAAATTTAGATGAAGCTGATATTTAGGTACTGTATTTTAATGCTTTTCTTTGTATGTGGACATTTTATTTTTGCAATGTTCCCCTTTTTTATTTGTCAGTTACTGTGGGTATACTTGTAGAACTCCCTACAGGTCTTTTTTATGGTTATTGTGCCATTTTGTTTTTAGTTTTCTTCTACTTTTTCCCTCAATCTCTTTGTACTTTCATCATTCTTACTTTATGATGAAAATTCGTATTGGTTTTTTATTTTCTCTGAGATGTTTAAGCTACAATCTTACCTCGTTGAGCATCAATCTTTTGTGCAGTTTACTTATTTTCAATCGTGTTGATTATGCTTGTAATTCTTCTAGGTCATTGGGTCTGGGAAGAAGCGCACCCAGAAAAGGCCTCATTCAGTACTGGGCCAGGAGGAGAGCGGTGTCTTAGAGCTTCCATGCCCTCAATGTGGTAAATATTTGCTTTCAGTTGGAAAATCATCTTCCAACGCCTTTTTGTTCATTCTCATCGTTAGTGACTTTTCTATAATACTTTGCTCTAGTTGAATTATCACTAACCCCACCAGCTTAAATGGATATGTTGAGTATATATATATATATATATATATTTTTTTTTTTTTATATATATATTATTAACATTTTTCCTCACTTGTGAGCTAGAAAAATAATTTAACTCACGAAATTCATAAGTGAATTTTTAATATCAATTGGGAAGAAAACATTACAAGATTTGAACGCATTATCTTCTCAAAGAAAAATAAATGTACTTGGCTTCTTCTACCGTGCAATTAGTTTTAATAATTTCTAATTTATTCCTTTTCTGGAGTTCATAGATTTCCATTCATTGCATATCTAGAGTTTTCTACCATTCTGTTACATTTTATATAATCTGAAAAGTCGATTTACATTTTCCAGGTACTGAATATGCTGGATTTCGTTGTAATCCAAACACGGTTCATCTACAATGTCATGGATGTGGAGGAATGATGCCTTCTCGATTTGATATTGGGATACCTCAACATTGTATGTTTGCATTTTCCCTTTATATTCTTTCTGTAATTATGATGTTTATATTAGCAACTTGTACTTATGATTTGTCAATACTCTATGGTGTAACTTAAGGCTGCTTACATTTATGGTAAGAGAGGGTTATTTTAGATTGGTGCATCCAACATTACTAAATACATTCATCATATCTATCTATCATTAGCGCATAGAGATTGCAGTATGATGTAAAGAATCACTTGGGTTGTCTTTTGTCTGGGTAAATATAGTTCAACAGACTCATTATTCTTTGTTGATGAAATTTGTTCATATAGTACGAAGTCAGAGATTATATTAACCTTAGATATGAGTGTAATGGTGATTAGTCTAATACAACGTTTCTATCTTTATTATTTTTATTTTAAATGTACAAGTTTGTGGACAATGGTCAGGAGACATGTAAAGAGGGGGAAATATTTAAAATTCAAATGCGGATGGGGCATCCTAGGATGTTTCAAAGTATAAGATTGTGAATTCCCACATCAGTTGGAGTGCTTCCTTAACAAGGGTGTGGAAACCTCCCCCTAGTAGATGCATTTTAAAAACCTTGAGGGGAAACCCGAAAGGGAATACCCAAAGAGAACAATATCTACTAGCGGTGGCCTTGAGCTGTTACGAATGGTATCAAAACCAGACACTGGGCGGTGTGACAACGATGACACTGGATCCCCAAGGGGGTGGATTGTGTGATCCCACCCTGGTTGGAGTGCTTCCTTGTAAGGGTGTAGAAATCTCCCCATAGTAGACGCGTTTTAAAAACCTTGAGGGGAAACCCGATATGAAAAACCCAAAGAGAACAATATCGGCTAGCAGTGAGTTTGGGTTGTTACAAGCTTAGGTATTTATATCTTTTTTCATGATCCAGTAGTTGGATGGCCACAAGAAGGACATCTTGAATTTAACATGATCGAACAAATCTCGTTGAGATTAATAATCCCGTCCGAAAAAAATAAAACTGCACCACGGAGGCCAACTTTTGTTGCTGAATATTTCATCCAATTATGAACTAGTAGATTTCTCTACCTTATATTTTACTGAGATTAAGTTTCCAAAGAAATTTGAACAAAACAAGGATTCAGAATTAAACTCTATGCAGAATTAACGTCTTCCATCTCTATTTTATATAGTTGTAAGCTTTTGTGTACATTGCAGGTTTAGGATGTGATAGAGCATTTTGTGGTGCATATTGGCAAGCTCAGAGGTTACAAAGAAGTGGTACTTACGCCATGTGCAATCCCGAGACTCTAAAACCGGTATGTGCTGTTATTGTTTGGTTTCTTTGTTTTCTTTTTCTTGTTTCAAAAGGATTCTGTCAAAGCTTGTTACCCCTTGTTGTTCTTACATTATTGGGCTAGCTAAATGATTCCGTTTCTATTTTACTTTGTAAAGGTTCTCTTATACTTAAATGTGTTCTTCATTGCAGATCTCCAGTCGTACCGTCTCAAGAATTCCACAGTTGACACATGAAAATAATCAACACGAACAGGATGTATAGATTTGCATCTACTTATTCATTAAGCAGTTTTTCCAGTTTTGCTAATAGATAGTTGATATGATTCACATTTTGGTTCTTAGATTACAGAGAGGTGCATTAGTCAGATGGGTAAAACATTGCAGGATGTCATCTCTGAATGGATTGTGAAGTTTAACAATAGAGAAATTGGTAGGTTTTTTCCAACTTTCTTGTTATTTTTTTATTATTAGAAACTAAGAATGCTCTTATTATAGAAAATTATAAAAGGGAGAAAAAATATATAATGCTACTGACAGAAAGTTCCTAGGGATGATACCTTAAAACGTAAAAAAAACAAGACTAAAGAGAAATTGTGGGAGAGTATGCAATGATATTCATCATATAGTAATGGAGAACTTGTAGGAAAAATTGTTATCCCATTGGCATGCCTCGTGTGAGGGCACGAGTGGTCGAAATTATATTACGTATGTGAATATAGCGGCTTATTAGTCTTTTGTCCTTTATTGAAATTTTACTATATTTCACTATTCCTAGTCGAGAACTTTCATGTATACCTATATATATTAAACTCAAACATATAGACCGACATGGGTTCTTCCATATTTTGGTATCACATTAATAGAAATGTCCCTCATATAGTAGTCTTAAATTGCAAATCAGATCGAACTCGAATGCCTCTAAACCACGTGGAGATGATAACTGCAGAGACGCATATTTGCAAGTAAGTCTTCTCATATTTCGTTCTTATTTTTCCACTTGATTCATGCAAGGAAATTGATGTCTTTTTCCACAGAAAGTATTGTATTTACTAGTTTATCTCTGCTTGAGGATACAGATCACCTCCCTTTTGTTTCTCTCGTTTGTTCTGTATAATTCTTGTACATGGATGGAAAGGGTCAAGTGCAATATGGGCATCATCATCTTCATCTTTCATCCTTCTGGGCTTCCCCTCAAAATTTTAAAACGCGTCTACTAGGAATTGGTTTCCACACCATTATAAAGAAAGTTTCATTCCCCTCTCCAACTAATGTGAGATCTCACAATCCACCCCGTTGGAGCCCTACGTCTTCACTGGTACACCGCCCGGTGTCTGCTCTAATACCATTTGTAACCGTCCAAGCCCACCGCTAGCAGATATTGTTCTCTTTGAGCTTTCTCTTTCAGATTTCCTCTCAAGATTTTTAAAATGGGTCTATTAGGGAGAGGTTTCCATACCCTTTAAAGAATGTTTCATTCCTCTCTCCAACCGACGTGGGATCTCACTAGAATGGCCTTATGAATTAGTCAGGTTATTAAGCTATAGTTTGCTAAAAAAAATCGTCTTCATTTCAAATGTGTATCTTGTCTCGTACCATTTCAGTTTAAAGCTGTTTTGGCATCCATTTTGACATGTAATACGTTCTGACAACTTGGAATGCCTTTTTGTCTCAATGAAGTGAGTGTTATGACAAATTGGTGGGATTTCTACTCTACTGGTTTCGCATTTCAACGCCAAAATATGTGAGTACTTTTGCCTGGGAATTTCAATTCTCCTTGCTTCTCCTTTCTAAATCCTACGTGAAATGTGGCAGCTTCTTCCAGGAGATGCAACTGAAAGGGAAAATTGTTGGTATGGATATGCATGTCGGACTCAACACCACAACGAAGATCACGCTCGCAAGCGAAACCATGTTTGTCGTCCCACCCGATCCCGATGATAATAGCGATTTCTATATCTGCTTCACTTTTTCTTTCCCTTTTAACCATATTTTTCCCTAGTCTTCAGTGATGTGATCTTTGAATTACAAGCATATTTTTGTGCCCTTAATTGGTTGCAAATATGCCTCTTTGTATGTGTATATTATTACATTCTCAACAAATCATGTAAACTTTATTTATCAAAGTTATGCCTTTGGGCCTAACTTTGTTTGATGTTCTCTCAAAAGAAATGGCTGCATACATCCTCGTAGAAAATGGATTGTTCATATAACGTTTTCTTGGCCTGCAGATGTTATTCCCAGATTTGTTCACTTGCAGGCTTTGCCATTGCATGCTTGCGGCGTACTTGCCTTGTAAGAAAGCAACGGCTCAACATTTTTA

mRNA sequence

TGCGATACAATTAGTCGATAAATGCTCCCACGTCGTAGTCATCAGCCGTTTACTTCACCTTCCTCCGCACGCTTCACAATTCTGCGTCTCTATTTATATTCGTAAAATTGTTTCATTTCAAGTTCTCAGAATCAGCAACATACTGGCGGTTATGGCGGAAGTTGGAGAGTGCTCTGCTTCAAATTCCTCCATACAAAACTGGGCGAAGCTAATTTCACTTGATAAAAAATACGCAGATATTGAGATAAACTCGGATGAGGCTGTTATCTTCTCAGAGACAAAGTCCTCATCTGTTGATAAGTATGAATGGTGCAAAATCACAAGGAATTCCGATGTAAACTCTATCACTTTGCAGAATAGAAGTTTCAATGCTATTCTTGTTGATGAGACTCTTGTTCAAAAGGATGACATTGCTTTCATCAAGTGTGGAAGCGAAATTGTTTCTGGTTCGGTCCGAGATGGGCATTTGAGCTATAAATTTGAAATCTTGTCAGACTCAAGAATATGCAAGGGCTTAAAGATTTCTATGGATGTTGAACACGCAAAATGCAGTATTTGCTTAAACATTTGGCATGATGTTGTCACAGCTGCTCCTTGCTTTCACAACTTTTGCAATGGATGCTTCTCGGAGTGGTTAAAAAGATCCCAAGAGAAGCGTACAAGTGTACTTTGTCCCCAGTGTAGGGCAGTTGTGCAGTTTGTTGGAAGAAACCACTTCTTGCTGAACATTGCAGAGACTATATTGCAAGAGGACTCTTCCCTTAGACGTTCAGTCGAAGAAATTGCTATTTTGGATTCTTGTTCATTAATACAATCAAATCTGGTCATTGGGTCTGGGAAGAAGCGCACCCAGAAAAGGCCTCATTCAGTACTGGGCCAGGAGGAGAGCGGTGTCTTAGAGCTTCCATGCCCTCAATGTGGTACTGAATATGCTGGATTTCGTTGTAATCCAAACACGGTTCATCTACAATGTCATGGATGTGGAGGAATGATGCCTTCTCGATTTGATATTGGGATACCTCAACATTGTTTAGGATGTGATAGAGCATTTTGTGGTGCATATTGGCAAGCTCAGAGGTTACAAAGAAGTGGTACTTACGCCATGTGCAATCCCGAGACTCTAAAACCGATCTCCAGTCGTACCGTCTCAAGAATTCCACAGTTGACACATGAAAATAATCAACACGAACAGGATATTACAGAGAGGTGCATTAGTCAGATGGGTAAAACATTGCAGGATGTCATCTCTGAATGGATTGTGAAGTTTAACAATAGAGAAATTGATCGAACTCGAATGCCTCTAAACCACGTGGAGATGATAACTGCAGAGACGCATATTTGCAATGAGTGTTATGACAAATTGGTGGGATTTCTACTCTACTGGTTTCGCATTTCAACGCCAAAATATCTTCTTCCAGGAGATGCAACTGAAAGGGAAAATTGTTGGTATGGATATGCATGTCGGACTCAACACCACAACGAAGATCACGCTCGCAAGCGAAACCATGTTTGTCGTCCCACCCGATCCCGATGATAATAGCGATTTCTATATCTGCTTCACTTTTTCTTTCCCTTTTAACCATATTTTTCCCTAGTCTTCAGTGATGTGATCTTTGAATTACAAGCATATTTTTGTGCCCTTAATTGGTTGCAAATATGCCTCTTTGTATGTGTATATTATTACATTCTCAACAAATCATGTAAACTTTATTTATCAAAGTTATGCCTTTGGGCCTAACTTTGTTTGATGTTCTCTCAAAAGAAATGGCTGCATACATCCTCGTAGAAAATGGATTGTTCATATAACGTTTTCTTGGCCTGCAGATGTTATTCCCAGATTTGTTCACTTGCAGGCTTTGCCATTGCATGCTTGCGGCGTACTTGCCTTGTAAGAAAGCAACGGCTCAACATTTTTA

Coding sequence (CDS)

ATGGCGGAAGTTGGAGAGTGCTCTGCTTCAAATTCCTCCATACAAAACTGGGCGAAGCTAATTTCACTTGATAAAAAATACGCAGATATTGAGATAAACTCGGATGAGGCTGTTATCTTCTCAGAGACAAAGTCCTCATCTGTTGATAAGTATGAATGGTGCAAAATCACAAGGAATTCCGATGTAAACTCTATCACTTTGCAGAATAGAAGTTTCAATGCTATTCTTGTTGATGAGACTCTTGTTCAAAAGGATGACATTGCTTTCATCAAGTGTGGAAGCGAAATTGTTTCTGGTTCGGTCCGAGATGGGCATTTGAGCTATAAATTTGAAATCTTGTCAGACTCAAGAATATGCAAGGGCTTAAAGATTTCTATGGATGTTGAACACGCAAAATGCAGTATTTGCTTAAACATTTGGCATGATGTTGTCACAGCTGCTCCTTGCTTTCACAACTTTTGCAATGGATGCTTCTCGGAGTGGTTAAAAAGATCCCAAGAGAAGCGTACAAGTGTACTTTGTCCCCAGTGTAGGGCAGTTGTGCAGTTTGTTGGAAGAAACCACTTCTTGCTGAACATTGCAGAGACTATATTGCAAGAGGACTCTTCCCTTAGACGTTCAGTCGAAGAAATTGCTATTTTGGATTCTTGTTCATTAATACAATCAAATCTGGTCATTGGGTCTGGGAAGAAGCGCACCCAGAAAAGGCCTCATTCAGTACTGGGCCAGGAGGAGAGCGGTGTCTTAGAGCTTCCATGCCCTCAATGTGGTACTGAATATGCTGGATTTCGTTGTAATCCAAACACGGTTCATCTACAATGTCATGGATGTGGAGGAATGATGCCTTCTCGATTTGATATTGGGATACCTCAACATTGTTTAGGATGTGATAGAGCATTTTGTGGTGCATATTGGCAAGCTCAGAGGTTACAAAGAAGTGGTACTTACGCCATGTGCAATCCCGAGACTCTAAAACCGATCTCCAGTCGTACCGTCTCAAGAATTCCACAGTTGACACATGAAAATAATCAACACGAACAGGATATTACAGAGAGGTGCATTAGTCAGATGGGTAAAACATTGCAGGATGTCATCTCTGAATGGATTGTGAAGTTTAACAATAGAGAAATTGATCGAACTCGAATGCCTCTAAACCACGTGGAGATGATAACTGCAGAGACGCATATTTGCAATGAGTGTTATGACAAATTGGTGGGATTTCTACTCTACTGGTTTCGCATTTCAACGCCAAAATATCTTCTTCCAGGAGATGCAACTGAAAGGGAAAATTGTTGGTATGGATATGCATGTCGGACTCAACACCACAACGAAGATCACGCTCGCAAGCGAAACCATGTTTGTCGTCCCACCCGATCCCGATGA

Protein sequence

MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNSDVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSVLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Homology
[Close]
BLAST of Cp4.1LG10g12220 vs. Swiss-Prot
Match: CHFR_MOUSE (E3 ubiquitin-protein ligase CHFR OS=Mus musculus GN=Chfr PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.7e-13
Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 1 

Query: 103 DGHLSYKFEILSDSRICKGLKISMDVEHAK-----------CSICLNIWHDVVTAAPCFH 162
           DG L    ++L   +       S DV+ A            C IC ++ HD V+  PC H
Sbjct: 262 DGELDTNLQLLVSGQRGNAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMH 321

Query: 163 NFCNGCFSEWLKRSQEKRTSVLCPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEI 222
            FC  C+S W++RS       LCP CR  V+ + +NH L N+ E  L +     RS E++
Sbjct: 322 TFCAACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDV 381

Query: 223 AILDSCSLIQSNLV 226
             +D+ + I  +++
Sbjct: 382 RSMDARNKITQDML 389

[Close]
BLAST of Cp4.1LG10g12220 vs. Swiss-Prot
Match: CHFR_HUMAN (E3 ubiquitin-protein ligase CHFR OS=Homo sapiens GN=CHFR PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-12
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 1 

Query: 115 DSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLC 174
           D R   G    M+ E   C IC ++ HD V+  PC H FC  C+S W++RS       LC
Sbjct: 287 DVRAAAGKPDKME-ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LC 346

Query: 175 PQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLV 226
           P CR  V+ + +NH L N+ E  L +     RS E++  +D+ + I  +++
Sbjct: 347 PTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDML 390

[Close]
BLAST of Cp4.1LG10g12220 vs. Swiss-Prot
Match: CHFR_PONAB (E3 ubiquitin-protein ligase CHFR OS=Pongo abelii GN=CHFR PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-12
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 1 

Query: 115 DSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLC 174
           D R   G    M+ E   C IC ++ HD V+  PC H FC  C+S W++RS       LC
Sbjct: 195 DVRAAAGKPDKME-ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LC 254

Query: 175 PQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLV 226
           P CR  V+ + +NH L N+ E  L +     RS E++  +D+ + I  +++
Sbjct: 255 PTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDML 298

[Close]
BLAST of Cp4.1LG10g12220 vs. Swiss-Prot
Match: CHFR_XENTR (E3 ubiquitin-protein ligase CHFR OS=Xenopus tropicalis GN=chfr PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-11
Identity = 37/112 (33.04%), Postives = 55/112 (49.11%), Query Frame = 1 

Query: 114 SDSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVL 173
           SD      +K     E   C IC  + HD V+  PC H FC  C+S W++RS       L
Sbjct: 248 SDESKTPSMKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSS------L 307

Query: 174 CPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLV 226
           CP CR  V+ + +NH L N+ E  L +     RS E+   +D+ + I  +++
Sbjct: 308 CPTCRCPVERICKNHILNNLVEAYLIQHPEKCRSEEDRCSMDARNKITQDML 353

[Close]
BLAST of Cp4.1LG10g12220 vs. Swiss-Prot
Match: CHFR_XENLA (E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis GN=chfr PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-11
Identity = 37/112 (33.04%), Postives = 55/112 (49.11%), Query Frame = 1 

Query: 114 SDSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVL 173
           SD      +K     E   C IC  + HD V+  PC H FC  C+S W++RS       L
Sbjct: 247 SDESKTPSMKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSS------L 306

Query: 174 CPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLV 226
           CP CR  V+ + +NH L N+ E  L +     RS E+   +D+ + I  +++
Sbjct: 307 CPTCRCPVERICKNHILNNLVEAYLIQHPEKCRSEEDRCSMDARNKITQDML 352

[Close]
BLAST of Cp4.1LG10g12220 vs. TrEMBL
Match: A0A0A0KYR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G508530 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 1.2e-193
Identity = 324/379 (85.49%), Postives = 350/379 (92.35%), Query Frame = 1 

Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAE+GECSASNSS++NWAKLI  DK YADIEINSDE VIFSETKS+SV+K+EWCKITRNS
Sbjct: 1   MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           D+N+ TLQNRS NAI+VDETLVQKD+  FIKCGSEIVSG VRDG+LS+KFE+LSDS++CK
Sbjct: 61  DLNTATLQNRSSNAIIVDETLVQKDETTFIKCGSEIVSGPVRDGNLSFKFEMLSDSKLCK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK T+VLCPQCRAV
Sbjct: 121 GLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTNVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNH+LLNIAE ILQ DSSLRRSVEEIA LDSCSLIQSNLVIGS KKR QKRPH +
Sbjct: 181 VQFVGRNHYLLNIAEDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFL 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LG EESG LELPCPQCGTEYAGFRCNP+ VHLQCH CGGMMPSRFD GIPQHCLGCDRAF
Sbjct: 241 LGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYW+AQ LQRS  YA C+PET KPIS RT+SRIPQLTHENN+HEQDIT RCISQMGKT
Sbjct: 301 CGAYWEAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDR 380
           LQDVISEWIV+F+NREI R
Sbjct: 361 LQDVISEWIVRFSNREIGR 379

[Close]
BLAST of Cp4.1LG10g12220 vs. TrEMBL
Match: B9N5A6_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0004s14500g PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 6.4e-192
Identity = 313/461 (67.90%), Postives = 370/461 (80.26%), Query Frame = 1 

Query: 3   EVGECSA-SNSSIQN--WAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRN 62
           E GECS+ SNSS  N  WAKL+  D +Y+D+EI S+E VI SE  S+S++K+EWCKITRN
Sbjct: 2   EFGECSSGSNSSSSNEAWAKLVPSDSRYSDVEIRSNEMVICSEITSTSLEKHEWCKITRN 61

Query: 63  SDVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRIC 122
           SD +S  +QN+S N ILVDE  VQ +D   I CGSEI+ G  R+G+LSY+F+++      
Sbjct: 62  SDQSSAMMQNKSLNTILVDEATVQNEDDVVINCGSEIIPGPAREGYLSYRFKLMPRESFT 121

Query: 123 KGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRA 182
           + LK+S+D EHAKCSICLN+WHDVVT APC HNFCNGCFSEWL+RSQE+  SVLCPQCRA
Sbjct: 122 RWLKVSIDAEHAKCSICLNVWHDVVTVAPCLHNFCNGCFSEWLRRSQERHASVLCPQCRA 181

Query: 183 VVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHS 242
           VVQFVGRNHFL +I E +LQ DSSL++S EEI +LDS + I+SNL+I +GKK  +KRPHS
Sbjct: 182 VVQFVGRNHFLHSIEEDVLQADSSLKQSDEEIILLDSYASIKSNLIIQTGKKHRRKRPHS 241

Query: 243 VLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQH--CLGCD 302
           +L   E+ V + PCPQCGTEY+GF CN NT+HLQC  CGGMMPSR DIG+PQH  CLGCD
Sbjct: 242 IL-DAENEVADFPCPQCGTEYSGFHCNQNTIHLQCQACGGMMPSRADIGVPQHCMCLGCD 301

Query: 303 RAFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQM 362
           R FCGAYW AQ + RS T+++C+ E  KPIS   VSRIP L HE N+HEQDITERCI QM
Sbjct: 302 RVFCGAYWHAQGVSRSDTHSICSHENFKPISEHAVSRIPFLAHEKNRHEQDITERCIGQM 361

Query: 363 GKTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTP 422
           GKTLQDVIS+WI K NNREIDR+RMPLNH EMIT  TH+CN+CYDKL+ FLLYWFRIS P
Sbjct: 362 GKTLQDVISDWIGKLNNREIDRSRMPLNHAEMITVGTHVCNDCYDKLISFLLYWFRISMP 421

Query: 423 KYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTR 459
           + LLP +A  RE+CWYGYACRTQHHNEDHARKRNHVCRPTR
Sbjct: 422 RNLLPPEAANREDCWYGYACRTQHHNEDHARKRNHVCRPTR 461

[Close]
BLAST of Cp4.1LG10g12220 vs. TrEMBL
Match: M5WHB6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005407mg PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 2.5e-188
Identity = 309/459 (67.32%), Postives = 367/459 (79.96%), Query Frame = 1 

Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGE S +  S + WAKL+  D +Y D+EI+SDE VI SE   SS DK++WCKITR+S
Sbjct: 1   MAEVGESSGAKPSCEIWAKLVPSDSRYPDVEISSDEIVICSEILFSSTDKWKWCKITRSS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRIC- 120
           D +S T+QN+S NAI VD T++Q +D   I+CGSEI SG  ++G+LSY+F +L     C 
Sbjct: 61  DHSSATIQNKSSNAIFVDGTVIQAEDTVVIRCGSEITSGPDKEGYLSYRFNVLPGPETCQ 120

Query: 121 KGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRA 180
           K LKISMDVEHAKC ICLNIWH+VVT +PCFHNFCNGCFSEWL+RSQEKR+SVLCPQCRA
Sbjct: 121 KQLKISMDVEHAKCCICLNIWHEVVTVSPCFHNFCNGCFSEWLRRSQEKRSSVLCPQCRA 180

Query: 181 VVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHS 240
           +VQFVGRNHFLLNIAE IL+ DSSL+RS EE+AIL+S + I+SNLV+ SGK    KR  S
Sbjct: 181 IVQFVGRNHFLLNIAEEILKADSSLKRSDEEVAILNSYATIRSNLVVSSGKSLRGKRARS 240

Query: 241 VLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRA 300
            + +       LPCPQCGTE+ GFRCN NT+HLQC  CGGMMPSR +I +PQHC GCD+A
Sbjct: 241 DVNEAVDDS-PLPCPQCGTEFGGFRCNQNTIHLQCQACGGMMPSRTNISVPQHCSGCDKA 300

Query: 301 FCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGK 360
           FCGAYW AQR+  S ++ MC+ ET KPIS  T+SRIP   HENN+HEQ ITE+CI+Q+G+
Sbjct: 301 FCGAYWNAQRVGHSDSHRMCSRETFKPISEHTISRIPTSAHENNRHEQVITEKCIAQLGR 360

Query: 361 TLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKY 420
           TLQDVI+EWI K NNREIDRTRMPLNH EMIT+ T  CN CY+KL+ FLLYWFRIS PK 
Sbjct: 361 TLQDVIAEWIAKLNNREIDRTRMPLNHAEMITSGTPTCNNCYEKLISFLLYWFRISIPKN 420

Query: 421 LLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTR 459
            LP +A+ RENCWYGYACRTQHHNE+HARKRNHVCRPT+
Sbjct: 421 HLPPEASNRENCWYGYACRTQHHNEEHARKRNHVCRPTK 458

[Close]
BLAST of Cp4.1LG10g12220 vs. TrEMBL
Match: F6HGI2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0130g00050 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 6.2e-187
Identity = 312/458 (68.12%), Postives = 361/458 (78.82%), Query Frame = 1 

Query: 3   EVGECSASNSSIQN-WAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNSD 62
           E GE SA+N S +  WAKL+  D +Y+++E+  DE VI S+    S DK EWCK+TRNSD
Sbjct: 2   EFGESSAANPSQEIVWAKLVPSDSRYSEVELRLDEMVICSDVMFPSFDKQEWCKVTRNSD 61

Query: 63  VNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICKG 122
             S T+QN+S N ILVDE  +  +D   IKCGSEI+ G   +G+LSY+FE++S     K 
Sbjct: 62  QCSATIQNKSSNTILVDEVAIPSEDSIVIKCGSEIIPGPKNEGYLSYRFEVMSPQESIKE 121

Query: 123 -LKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 182
            LKI +DVEHAKCSICLNIWHDVVT APC HNFCNGCFSEWL+RSQ K ++VLCPQCRA+
Sbjct: 122 QLKICLDVEHAKCSICLNIWHDVVTVAPCLHNFCNGCFSEWLRRSQNKHSNVLCPQCRAI 181

Query: 183 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 242
           VQFVGRNHFL  I ETILQ D SLRRS EE+A+L+S + IQSNLV+ +G K  +KR HS 
Sbjct: 182 VQFVGRNHFLRTIEETILQADPSLRRSDEEVAVLESHASIQSNLVLKTGTKLGRKRAHSS 241

Query: 243 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 302
           L  EES  LE PCPQCG EYAGF CNPNTVHLQCH CGGMMPSR DIG+PQHCLGCDRAF
Sbjct: 242 L-NEESEELEFPCPQCGAEYAGFLCNPNTVHLQCHACGGMMPSRNDIGVPQHCLGCDRAF 301

Query: 303 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 362
           CGAYW  QR   S ++ +C  ET KPIS  T+SRIP L HENN HEQ+ITERCI QMGKT
Sbjct: 302 CGAYWHTQRFGGSDSHPVCCHETFKPISDHTISRIPTLAHENNWHEQNITERCIRQMGKT 361

Query: 363 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 422
           LQDVISE +++ +NREIDRTRM LNH EMITA T++CNECYDKLV FLLYWFR+S PK  
Sbjct: 362 LQDVISELLIRLSNREIDRTRMQLNHSEMITASTYVCNECYDKLVSFLLYWFRVSMPKSF 421

Query: 423 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTR 459
           LP DA++RE+CWYGYACRTQ HNE+HARKRNHVCRPTR
Sbjct: 422 LPPDASKREDCWYGYACRTQQHNEEHARKRNHVCRPTR 458

[Close]
BLAST of Cp4.1LG10g12220 vs. TrEMBL
Match: W9R1P6_9ROSA (E3 ubiquitin-protein ligase CHFR OS=Morus notabilis GN=L484_013092 PE=4 SV=1)

HSP 1 Score: 655.2 bits (1689), Expect = 5.8e-185
Identity = 308/460 (66.96%), Postives = 365/460 (79.35%), Query Frame = 1 

Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGE S + S  + WAKL+  D +++D+EI SDE VI S  + SS D++ WC I RNS
Sbjct: 1   MAEVGESSGAKSPQEIWAKLVPSDSRHSDVEIKSDEIVICSVIRLSSFDEHAWCTIKRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRIC- 120
           D+ S TLQN+S  AIL DE ++   D   I+CGSEI+ G  R+G+L Y+F+++       
Sbjct: 61  DLCSATLQNKSSTAILADEAVIHNGDTIDIRCGSEIIPGPDREGYLRYRFKVMPRPETSQ 120

Query: 121 KGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRA 180
           K LKI +DV+HAKCSICL++WHDVVT APCFHNFCNGCFSEWL+RSQEKR+SVLCPQCRA
Sbjct: 121 KQLKICIDVDHAKCSICLSVWHDVVTVAPCFHNFCNGCFSEWLRRSQEKRSSVLCPQCRA 180

Query: 181 VVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHS 240
           VVQF GRNHFL  I E IL+ DSSL+RS EE+A LDSC+ IQSNLVI SGKK  +KR +S
Sbjct: 181 VVQFAGRNHFLHYIGEDILKADSSLKRSDEEVATLDSCASIQSNLVIKSGKKLGRKRSYS 240

Query: 241 VLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIG-IPQHCLGCDR 300
            L +++  V ELPCPQCGTE  GFRC+ NT+HLQCH CGGMMPSR     +PQHCLGCDR
Sbjct: 241 PLHEDDHSV-ELPCPQCGTESGGFRCDHNTIHLQCHACGGMMPSRPPATTVPQHCLGCDR 300

Query: 301 AFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMG 360
           AFCGAYW A R+  +G++AMC  ET +PIS RT+SRIP   HE N+HEQDITE+CI QMG
Sbjct: 301 AFCGAYWHAHRVTGTGSHAMCRVETFQPISERTISRIPFWAHEKNRHEQDITEKCIRQMG 360

Query: 361 KTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPK 420
           +TLQDVI+EWI KFNNREIDRTRMPLNH E IT+ TH+CN+CY+KLV FLLYW+RIS PK
Sbjct: 361 RTLQDVITEWITKFNNREIDRTRMPLNHAERITSGTHLCNDCYEKLVSFLLYWYRISMPK 420

Query: 421 YLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTR 459
            LLP DA  RE+CWYGYACRTQHHNE+HARKRNHVCRPTR
Sbjct: 421 NLLPPDALAREDCWYGYACRTQHHNEEHARKRNHVCRPTR 459

[Close]
BLAST of Cp4.1LG10g12220 vs. TAIR10
Match: AT1G47570.1 (AT1G47570.1 RING/U-box superfamily protein)

HSP 1 Score: 580.5 bits (1495), Expect = 9.2e-166
Identity = 274/460 (59.57%), Postives = 341/460 (74.13%), Query Frame = 1 

Query: 2   AEVGECSASNSSIQN-WAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 61
           AE G+ S S  S  + WAKL+ LD +++DIEI  ++ VI SE K SS++K+EWC+IT+N 
Sbjct: 5   AETGQSSGSKPSDDDAWAKLVPLDTRFSDIEIRCNDMVICSEIKPSSLEKHEWCRITKNL 64

Query: 62  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILS--DSRI 121
             +S T+ N+S +AILVD+ +V KD    I  GSEIV G    G+L Y+F I+   +SR 
Sbjct: 65  GQSSATIHNKSSDAILVDKAVVPKDGAVDIISGSEIVPGPEEQGYLQYRFTIMPAPESRT 124

Query: 122 CKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCR 181
            + L+IS+D EHAKCSICLNIWHDVVTAAPC HNFCNGCFSEW++RS+EK   VLCPQCR
Sbjct: 125 -QLLQISIDPEHAKCSICLNIWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLCPQCR 184

Query: 182 AVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPH 241
             VQ+VG+NHFL NI E IL+ D++LRR  E+IA+LDS + IQSNL+IGS +KR    P 
Sbjct: 185 TTVQYVGKNHFLKNIQEEILKVDAALRRPAEDIAVLDSSASIQSNLIIGSKRKRRLNMPA 244

Query: 242 SVLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDR 301
                EE   L L CPQC     G+RC  +  HLQCH C GMMP R ++ +P HC GCDR
Sbjct: 245 PT--HEERDSLRLQCPQCVANIGGYRCEHHGAHLQCHLCQGMMPFRANLQVPLHCKGCDR 304

Query: 302 AFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMG 361
            FCGAYW ++ + +  +  +C  ET +PIS RT++RIP +THE N+HEQDIT+RCI+ M 
Sbjct: 305 PFCGAYWSSENVTQGVSGPVCVRETFRPISERTITRIPFITHEMNRHEQDITQRCIAHME 364

Query: 362 KTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPK 421
           KT+ DV++EW+  FNNREIDR+RMPLNH E ITA TH+CN+CYDKLVGFLLYWFRI+ P+
Sbjct: 365 KTVPDVVAEWLRLFNNREIDRSRMPLNHAETITASTHVCNDCYDKLVGFLLYWFRITLPR 424

Query: 422 YLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTR 459
             LP D   RE+CWYGYACRTQHHNEDHARKRNHVCRPTR
Sbjct: 425 NHLPADVAAREDCWYGYACRTQHHNEDHARKRNHVCRPTR 461

[Close]
BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: gi|659082894|ref|XP_008442086.1| (PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis melo])

HSP 1 Score: 857.1 bits (2213), Expect = 1.5e-245
Identity = 401/460 (87.17%), Postives = 427/460 (92.83%), Query Frame = 1 

Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAE+GECSASNSS++NWAKLI  DK Y DIEINSDE VIFSETKS+SV+K+EWCKITRNS
Sbjct: 1   MAEIGECSASNSSLENWAKLIPTDKMYVDIEINSDETVIFSETKSTSVEKHEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           D+N+ TLQNRS NAI+VDETLVQKD+  FI+CGSEIVSG VRDGHLS+KFE+ SDS++CK
Sbjct: 61  DLNTATLQNRSSNAIIVDETLVQKDETTFIRCGSEIVSGPVRDGHLSFKFEMSSDSKLCK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRA 
Sbjct: 121 GLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAA 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNH+LLNIAE ILQ DSSLRRSVEEIA LDSCSLIQSNLVIGS KKR +KRP  V
Sbjct: 181 VQFVGRNHYLLNIAEDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNEKRPRFV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LG EESG LELPCPQCGTEYAGFRC+P+ VHLQCHGCGGMMPSRFD GIPQHCLGCDRAF
Sbjct: 241 LGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYWQAQ LQRS  YA C+PET KPIS RT+SRIPQLTHENN+HEQDIT RCISQMGKT
Sbjct: 301 CGAYWQAQSLQRSDIYATCSPETFKPISGRTISRIPQLTHENNRHEQDITGRCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIV+FNNREIDRTRMPLNH EMI+AET ICNECY+KLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVRFNNREIDRTRMPLNHAEMISAETPICNECYEKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 461
           LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460

[Close]
BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: gi|778695009|ref|XP_004146401.2| (PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis sativus])

HSP 1 Score: 854.4 bits (2206), Expect = 9.4e-245
Identity = 401/460 (87.17%), Postives = 429/460 (93.26%), Query Frame = 1 

Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAE+GECSASNSS++NWAKLI  DK YADIEINSDE VIFSETKS+SV+K+EWCKITRNS
Sbjct: 1   MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           D+N+ TLQNRS NAI+VDETLVQKD+  FIKCGSEIVSG VRDG+LS+KFE+LSDS++CK
Sbjct: 61  DLNTATLQNRSSNAIIVDETLVQKDETTFIKCGSEIVSGPVRDGNLSFKFEMLSDSKLCK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK T+VLCPQCRAV
Sbjct: 121 GLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTNVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNH+LLNIAE ILQ DSSLRRSVEEIA LDSCSLIQSNLVIGS KKR QKRPH +
Sbjct: 181 VQFVGRNHYLLNIAEDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKRNQKRPHFL 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LG EESG LELPCPQCGTEYAGFRCNP+ VHLQCH CGGMMPSRFD GIPQHCLGCDRAF
Sbjct: 241 LGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYW+AQ LQRS  YA C+PET KPIS RT+SRIPQLTHENN+HEQDIT RCISQMGKT
Sbjct: 301 CGAYWEAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGRCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIV+F+NREIDRTRMPLNH EMITAET IC+ECY+KLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVRFSNREIDRTRMPLNHAEMITAETPICHECYEKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 461
           LP DATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPEDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460

[Close]
BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: gi|659082892|ref|XP_008442085.1| (PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X1 [Cucumis melo])

HSP 1 Score: 849.7 bits (2194), Expect = 2.3e-243
Identity = 401/468 (85.68%), Postives = 427/468 (91.24%), Query Frame = 1 

Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAE+GECSASNSS++NWAKLI  DK Y DIEINSDE VIFSETKS+SV+K+EWCKITRNS
Sbjct: 1   MAEIGECSASNSSLENWAKLIPTDKMYVDIEINSDETVIFSETKSTSVEKHEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           D+N+ TLQNRS NAI+VDETLVQKD+  FI+CGSEIVSG VRDGHLS+KFE+ SDS++CK
Sbjct: 61  DLNTATLQNRSSNAIIVDETLVQKDETTFIRCGSEIVSGPVRDGHLSFKFEMSSDSKLCK 120

Query: 121 GLK--------ISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSV 180
           GLK        IS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSV
Sbjct: 121 GLKVIGNCHVLISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSV 180

Query: 181 LCPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKR 240
           LCPQCRA VQFVGRNH+LLNIAE ILQ DSSLRRSVEEIA LDSCSLIQSNLVIGS KKR
Sbjct: 181 LCPQCRAAVQFVGRNHYLLNIAEDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKR 240

Query: 241 TQKRPHSVLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQH 300
            +KRP  VLG EESG LELPCPQCGTEYAGFRC+P+ VHLQCHGCGGMMPSRFD GIPQH
Sbjct: 241 NEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQH 300

Query: 301 CLGCDRAFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITER 360
           CLGCDRAFCGAYWQAQ LQRS  YA C+PET KPIS RT+SRIPQLTHENN+HEQDIT R
Sbjct: 301 CLGCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISGRTISRIPQLTHENNRHEQDITGR 360

Query: 361 CISQMGKTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWF 420
           CISQMGKTLQDVISEWIV+FNNREIDRTRMPLNH EMI+AET ICNECY+KLVGFLLYWF
Sbjct: 361 CISQMGKTLQDVISEWIVRFNNREIDRTRMPLNHAEMISAETPICNECYEKLVGFLLYWF 420

Query: 421 RISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 461
           RISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 RISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 468

[Close]
BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: gi|778695005|ref|XP_011653909.1| (PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X1 [Cucumis sativus])

HSP 1 Score: 847.0 bits (2187), Expect = 1.5e-242
Identity = 401/468 (85.68%), Postives = 429/468 (91.67%), Query Frame = 1 

Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAE+GECSASNSS++NWAKLI  DK YADIEINSDE VIFSETKS+SV+K+EWCKITRNS
Sbjct: 1   MAEIGECSASNSSMENWAKLIPTDKMYADIEINSDETVIFSETKSTSVEKHEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           D+N+ TLQNRS NAI+VDETLVQKD+  FIKCGSEIVSG VRDG+LS+KFE+LSDS++CK
Sbjct: 61  DLNTATLQNRSSNAIIVDETLVQKDETTFIKCGSEIVSGPVRDGNLSFKFEMLSDSKLCK 120

Query: 121 GLK--------ISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSV 180
           GLK        IS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK T+V
Sbjct: 121 GLKVIGNCHVLISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTNV 180

Query: 181 LCPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKR 240
           LCPQCRAVVQFVGRNH+LLNIAE ILQ DSSLRRSVEEIA LDSCSLIQSNLVIGS KKR
Sbjct: 181 LCPQCRAVVQFVGRNHYLLNIAEDILQADSSLRRSVEEIATLDSCSLIQSNLVIGSVKKR 240

Query: 241 TQKRPHSVLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQH 300
            QKRPH +LG EESG LELPCPQCGTEYAGFRCNP+ VHLQCH CGGMMPSRFD GIPQH
Sbjct: 241 NQKRPHFLLGLEESGGLELPCPQCGTEYAGFRCNPHMVHLQCHECGGMMPSRFDTGIPQH 300

Query: 301 CLGCDRAFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITER 360
           CLGCDRAFCGAYW+AQ LQRS  YA C+PET KPIS RT+SRIPQLTHENN+HEQDIT R
Sbjct: 301 CLGCDRAFCGAYWEAQSLQRSDIYATCSPETFKPISRRTISRIPQLTHENNRHEQDITGR 360

Query: 361 CISQMGKTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWF 420
           CISQMGKTLQDVISEWIV+F+NREIDRTRMPLNH EMITAET IC+ECY+KLVGFLLYWF
Sbjct: 361 CISQMGKTLQDVISEWIVRFSNREIDRTRMPLNHAEMITAETPICHECYEKLVGFLLYWF 420

Query: 421 RISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 461
           RISTPKYLLP DATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 RISTPKYLLPEDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 468

[Close]
BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: gi|659082896|ref|XP_008442087.1| (PREDICTED: uncharacterized protein LOC103486049 isoform X3 [Cucumis melo])

HSP 1 Score: 789.3 bits (2037), Expect = 3.7e-225
Identity = 375/468 (80.13%), Postives = 401/468 (85.68%), Query Frame = 1 

Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAE+GECSASNSS++NWAKLI  DK Y DIEINSDE VIFSETKS+SV+K+EWCKITRNS
Sbjct: 1   MAEIGECSASNSSLENWAKLIPTDKMYVDIEINSDETVIFSETKSTSVEKHEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           D+N+ TLQNRS NAI+VDETLVQKD+  FI+CGSEIVSG VRDGHLS+KFE+ SDS++CK
Sbjct: 61  DLNTATLQNRSSNAIIVDETLVQKDETTFIRCGSEIVSGPVRDGHLSFKFEMSSDSKLCK 120

Query: 121 GLK--------ISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSV 180
           GLK        IS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSV
Sbjct: 121 GLKVIGNCHVLISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSV 180

Query: 181 LCPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKR 240
           LCPQCRA VQFVGRNH+LLNIAE                             VIGS KKR
Sbjct: 181 LCPQCRAAVQFVGRNHYLLNIAE-----------------------------VIGSVKKR 240

Query: 241 TQKRPHSVLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQH 300
            +KRP  VLG EESG LELPCPQCGTEYAGFRC+P+ VHLQCHGCGGMMPSRFD GIPQH
Sbjct: 241 NEKRPRFVLGLEESGGLELPCPQCGTEYAGFRCSPHMVHLQCHGCGGMMPSRFDTGIPQH 300

Query: 301 CLGCDRAFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITER 360
           CLGCDRAFCGAYWQAQ LQRS  YA C+PET KPIS RT+SRIPQLTHENN+HEQDIT R
Sbjct: 301 CLGCDRAFCGAYWQAQSLQRSDIYATCSPETFKPISGRTISRIPQLTHENNRHEQDITGR 360

Query: 361 CISQMGKTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWF 420
           CISQMGKTLQDVISEWIV+FNNREIDRTRMPLNH EMI+AET ICNECY+KLVGFLLYWF
Sbjct: 361 CISQMGKTLQDVISEWIVRFNNREIDRTRMPLNHAEMISAETPICNECYEKLVGFLLYWF 420

Query: 421 RISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 461
           RISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 RISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 439

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g12220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHFR_MOUSE7.7e-1330.60E3 ubiquitin-protein ligase CHFR OS=Mus musculus GN=Chfr PE=1 SV=1[more]
CHFR_HUMAN1.3e-1234.23E3 ubiquitin-protein ligase CHFR OS=Homo sapiens GN=CHFR PE=1 SV=2[more]
CHFR_PONAB1.3e-1234.23E3 ubiquitin-protein ligase CHFR OS=Pongo abelii GN=CHFR PE=2 SV=1[more]
CHFR_XENTR1.5e-1133.04E3 ubiquitin-protein ligase CHFR OS=Xenopus tropicalis GN=chfr PE=2 SV=1[more]
CHFR_XENLA1.5e-1133.04E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis GN=chfr PE=1 SV=1[more]
BLAST of Cp4.1LG10g12220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYR0_CUCSA1.2e-19385.49Uncharacterized protein OS=Cucumis sativus GN=Csa_4G508530 PE=4 SV=1[more]
B9N5A6_POPTR6.4e-19267.90Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0004s14500g PE=4 SV=1[more]
M5WHB6_PRUPE2.5e-18867.32Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005407mg PE=4 SV=1[more]
F6HGI2_VITVI6.2e-18768.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0130g00050 PE=4 SV=... [more]
W9R1P6_9ROSA5.8e-18566.96E3 ubiquitin-protein ligase CHFR OS=Morus notabilis GN=L484_013092 PE=4 SV=1[more]
BLAST of Cp4.1LG10g12220 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G47570.19.2e-16659.57 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082894|ref|XP_008442086.1|1.5e-24587.17PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis melo][more]
gi|778695009|ref|XP_004146401.2|9.4e-24587.17PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Cucumis sativus][more]
gi|659082892|ref|XP_008442085.1|2.3e-24385.68PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X1 [Cucumis melo][more]
gi|778695005|ref|XP_011653909.1|1.5e-24285.68PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X1 [Cucumis sativus][more]
gi|659082896|ref|XP_008442087.1|3.7e-22580.13PREDICTED: uncharacterized protein LOC103486049 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g12220.1Cp4.1LG10g12220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 133..177
score: 7.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 133..178
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 124..203
score: 5.6
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 133..177
score: 8.
NoneNo IPR availablePANTHERPTHR16079UBIQUITIN LIGASE PROTEIN CHFRcoord: 3..458
score: 1.9E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 132..184
score: 1.37