Cp4.1LG10g11930 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g11930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	E3 ubiquitin-protein ligase
Location	Cp4.1LG10 : 8364181 .. 8368286 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAACAAAAGAAAAAATAAGTAAAAAGCCAAAGAGAAATTAAAGCGAGAGAGAGAGAAGAAAATTATAATGGCGGTCCCGCAGCGGTGGTGAAAGCAATTGCACAATTCCAACGATTCATCGATAATCAATCATTAATCGTTTTAACTTTTTGTTCGAATTCCAAAGCCGATGAGGTATGGGCTAATCCCAGTTCTGGTCCCCGTTGGATTGAGGTTAGTTTTCTTTTCTTTTAATCCCTTTCTTCAATTCCATTTCTGGATTTGTTTTTAACGTTCGTATTGATTTTGCCACTTTTGAGTCACCCCCGGAATTTATCATTTGAATTGATCGTCTGTTTCTGCAATTTGACTCGGAATTCTCAACTAGGGATATGGATTTTTTTTGTTTTTTTTGTAAGATTTTCTTCTGTTATTGTTCTTGGTTTTTGTGGGGTTCTGTTTTTCTTTCTGGAGACTTGTGAATGAGGTCTTGTTTTGTTCCGTTCCTTAGGTTTCGTGCAAATGTTGTTTCGTTGTTGAATATTGATTTTCTAATCAGAAATGGTTTATCAATTTGTAATTTGTATAAGAGGAAGAACAGGGTTTTGGATTCGTGCTGCGATTTCAGTCCATTTTTTAGGGCTTTCGGTGGATGAAGTTTGATTTAATCACATGGTTTTTGAAATTTGACTGAAATAGGGTTGTTCTGATGGATTCAAATGAGCCTATGATTTCATTAAGTGATTTATCTCCACAATTTTAAAGCATTTGATATGAACTGAAACTTTTTTGTAAGACGATGTTAGCGTTCATGCTTTGTTACTTTTCCTTTTCTATTTCTCTTCCAAAACAAAATAATCGAGTTAAGTTAGTGTAGGATGTTTCGTTTTGTGTTCATGATTAGACACTATAATGGGCTCTGTATGCAACCTGTAGCTGACCTGTAGCTGGATTGAATCCATCGCGATGCAAATGCCCTCTTCCTTCCCCCAACCCAACTAAGGTGAAACACCTACTCCTAACAAAAGCGAAGCAAGCCGCGCTACTACCGCGCATCCGTTTTTTAGCTGGCTTCAAAGAAGGAAAAGCTGGCACTCCTGCCCCTAACCTAGGTTGAGACCTTTCGAGATTCTTATAGTCAAGCCTCAACGCCCTGCAATCTTTCTAAAGCGCTAACGCCGCTCTAATACGCCCTTATTAGATAGAGTCGATTTCCTCTTTTGTTAATGTACACTCTCTCAATTCTAAAAATTAAAGAGGGGAAAATGAGTGGAAAAGGTTGAAATCTTTTCTTAATAGAATTTTGAATTTAAGATTTCCCCTCCTTTGTCTTGGCTTATTCAGAAAATTAATGATTCTGGTGATGGTGGCAGTTTGGGGATAGAGGGACAGAAGAGGAAAATCTTGTTTACATTTATTTGGGTATGGAGAAAGCATAAAGAATAACTTAGGTCCCCAGAGATGATTTCCAAGTTGATATTCGACAAACCGTAGCATTGAGCGAGCACCGTGTTATTTGGGATTTCACTATTGCTTTGGGTTTGGAAGGAATCTAGATTGCTTTATATTTATTTCATCAAGGTTTTTCAAGTAAAGAGTTCATCAAACTAAATAAATTTTGAAGTTGATCTTTCAGTATTTTGAAGCTTCTTTGTCAATGAATGCCTGGATGTGCACGTGCCTTGGTACAATCCAACTTTAAGCTAGCCTTGTTAGGTTTAGGTTCGGTAGTACGAGTTTACATGCTTGGACTATTCAATGGAACGGTTTGTAAAATCTCGAGGTTTGTGTAATATGTGTTTGTTTAAGATTAATAATATACAAACTTCACATGTAGTAGAAAAGGTGGGTTTTAAACCTTGAGTTTGTGTAGTTTGTAGGATTAGCGAACTTATAGCTTGGAATACGAAACTCTAAGTACCAAACATACGCTCGAATTCTGTTAACTCAATGTTATATAAATCTAACCATGAGCTAGCGACCAATATCGGTTACTAAAGAATCTAGCAAATGGCCAGTAAGCATATATGTGTTGTTCCAGTTCAGATTATAAGAAAATGAGGGTGTTGCTAAGTCCTGTATGTTATTAAGCATTGTTGATCATGTTTAGTTTTCGTTATCACCCGACTTTCGTTCAAATTATACCAACAAATCTCCGAACAACATGAAACCTTTCGTCTAATATGTTCACTGACATGCCCTTTTCTTTTTTTTTTGTCTGGTTTAATAGGATTGAACTCATTGATGAGTGATGGCTGCCATATGGTGAAGCATTTCCAATAATAGCTTAAAGAACTCCATTAAAGTTTAAATGGCCATGGCTCCAGGAAGCAGTACCTGCAAAGAAGTAGTTGATTCTCATCCTTCAGTTTCAGGGCATGACATAGCAATGTCTAAATCAGAGAATAATTCTACATCTTCAAAAGTCCTACTTGGTTCGAGTGGGAAGCTTGGAGTTTATTCAACCAATGGCGTGCAAGAACTGCTCGAGTGCCCTGTCTGCACAAATCTGATGTACCCTCCAATTTACCAGGTATGTACTTCATATCCTGTTTTTTCTCTTGTACTTCTCATTATAATTTAAGCTATGCTCGGGAGTGTTCGGAGTGCTTTCAGCGTCGAAAAAAGTACTTTTTCTGTATGGCTTAATTGCTTAATTCTTGATTCGAAGGTTGATTTGGACTCTGTACTGTGGCGAATTCTCCATATTACTGGTTCTTTAGTTCTTTTCTTAATATTAAGGTTGTATTGAAGACTTAGAACATCTCTTTATTCTTGAATCTTTACGTCGTGGAGGTGTGATATATTTTTCCGCTTCTGCTTTGTTTCGGACTTTCTTGACTGGCTTTTGAACTTTAGTGCCCGAATGGCCACACGTTGTGCTCAAACTGCAAGATCAGAGTTAGCAACTGCTGCCCGACCTGTCGTCATGAACTCGGAAACATAAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTGGAAATCCCCTGCAGATACCAGAATTTGGGTTGCCAAGATATTTTTCCTTACTACAGTAAGCTTAAGCATGAGCAACACTGTCGATTCCGTCCTTACAACTGCCCTTATGCTGGATCCGAGTGCTCGGTCACGGGCGACATCCCGTCTCTTGTTGCACATCTCAAAGATGATCACAAGGTTGACATGCACGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAATCCACACGAAGTTGAAAACGCTACATGGATGCTAACGGTAGGTGCTTGCTCTATATAGTTTTAGTATACTTTCTCACCATGCTTCACTTCACATAACTTAACTATGTAAGCCATATATACAAGTTTTCTTGAAAATCAAATGTATAGTTAAAAGTTCGTCCCGTGAGTATATATAAATATATATTTCGATAAACCGTGTAATCTGTACGATGATAATTGCTAGCTAAAGGTCTGAAAAACCGGGTTGTCTTCCATCTTTGAGCATTGGAATATCTTATAGCAGTTTGCAATGGCAGGTTTTCAACTGCTTTGGAAGACAGTTCTGCTTGCATTTCGAGGCGTTCCAGCTAGGAACAGCGCCTGTTTACATGGCGTTCTTACGATTCATGGGCGAAGATAACGAAGCAAAGAAGTTCAGCTACAGTTTGGAGGTGGGTCACAACGGGCGAAAACTGATATGGCAAGGAATTCCGAGAGGCATCCGTGACAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCAAAGAAACCTGGCACTGTATTTTTCGGGGGGAGAAAGACGAGAGCTGAAACTGAGAATCACGGGTCGAATATGGAAAGAAGAATGAGAGCAGGAGCAAGGGCCTAAGCTAAGCTCTTGTGGTGTTCAGGTGAATGTATCATTGTACAGGTAAAACAAGTTCTCCAAGTGATGAAAAAGCTCTTAGGAGAAACTTCCAAGCTAATATAAAAAATGTAACCTACAAAATGAATCAAAAAAGCTTTTATGTATTTATAGTTCGAGATACGTTTCAATCTAGTGTCGTGTAGTTTGAGCTTAGCTTCAATTCCATCAACCGTGTTTAAATTATGAGGATTAAATTAAGTTAAGACGTGTGACATATGATTCGAAGCCATATTTAAAAGCC

mRNA sequence

GAAACAAAAGAAAAAATAAGTAAAAAGCCAAAGAGAAATTAAAGCGAGAGAGAGAGAAGAAAATTATAATGGCGGTCCCGCAGCGGTGGTGAAAGCAATTGCACAATTCCAACGATTCATCGATAATCAATCATTAATCGTTTTAACTTTTTGTTCGAATTCCAAAGCCGATGAGGTATGGGCTAATCCCAGTTCTGGTCCCCGTTGGATTGAGGATTGAACTCATTGATGAGTGATGGCTGCCATATGGTGAAGCATTTCCAATAATAGCTTAAAGAACTCCATTAAAGTTTAAATGGCCATGGCTCCAGGAAGCAGTACCTGCAAAGAAGTAGTTGATTCTCATCCTTCAGTTTCAGGGCATGACATAGCAATGTCTAAATCAGAGAATAATTCTACATCTTCAAAAGTCCTACTTGGTTCGAGTGGGAAGCTTGGAGTTTATTCAACCAATGGCGTGCAAGAACTGCTCGAGTGCCCTGTCTGCACAAATCTGATGTACCCTCCAATTTACCAGTGCCCGAATGGCCACACGTTGTGCTCAAACTGCAAGATCAGAGTTAGCAACTGCTGCCCGACCTGTCGTCATGAACTCGGAAACATAAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTGGAAATCCCCTGCAGATACCAGAATTTGGGTTGCCAAGATATTTTTCCTTACTACAGTAAGCTTAAGCATGAGCAACACTGTCGATTCCGTCCTTACAACTGCCCTTATGCTGGATCCGAGTGCTCGGTCACGGGCGACATCCCGTCTCTTGTTGCACATCTCAAAGATGATCACAAGGTTGACATGCACGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAATCCACACGAAGTTGAAAACGCTACATGGATGCTAACGGTTTTCAACTGCTTTGGAAGACAGTTCTGCTTGCATTTCGAGGCGTTCCAGCTAGGAACAGCGCCTGTTTACATGGCGTTCTTACGATTCATGGGCGAAGATAACGAAGCAAAGAAGTTCAGCTACAGTTTGGAGGTGGGTCACAACGGGCGAAAACTGATATGGCAAGGAATTCCGAGAGGCATCCGTGACAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCAAAGAAACCTGGCACTGTATTTTTCGGGGGGAGAAAGACGAGAGCTGAAACTGAGAATCACGGGTCGAATATGGAAAGAAGAATGAGAGCAGGAGCAAGGGCCTAAGCTAAGCTCTTGTGGTGTTCAGGTGAATGTATCATTGTACAGGTAAAACAAGTTCTCCAAGTGATGAAAAAGCTCTTAGGAGAAACTTCCAAGCTAATATAAAAAATGTAACCTACAAAATGAATCAAAAAAGCTTTTATGTATTTATAGTTCGAGATACGTTTCAATCTAGTGTCGTGTAGTTTGAGCTTAGCTTCAATTCCATCAACCGTGTTTAAATTATGAGGATTAAATTAAGTTAAGACGTGTGACATATGATTCGAAGCCATATTTAAAAGCC

Coding sequence (CDS)

ATGGCCATGGCTCCAGGAAGCAGTACCTGCAAAGAAGTAGTTGATTCTCATCCTTCAGTTTCAGGGCATGACATAGCAATGTCTAAATCAGAGAATAATTCTACATCTTCAAAAGTCCTACTTGGTTCGAGTGGGAAGCTTGGAGTTTATTCAACCAATGGCGTGCAAGAACTGCTCGAGTGCCCTGTCTGCACAAATCTGATGTACCCTCCAATTTACCAGTGCCCGAATGGCCACACGTTGTGCTCAAACTGCAAGATCAGAGTTAGCAACTGCTGCCCGACCTGTCGTCATGAACTCGGAAACATAAGGTGCTTGGCATTGGAGAAGGTAGCTGAGTCGCTGGAAATCCCCTGCAGATACCAGAATTTGGGTTGCCAAGATATTTTTCCTTACTACAGTAAGCTTAAGCATGAGCAACACTGTCGATTCCGTCCTTACAACTGCCCTTATGCTGGATCCGAGTGCTCGGTCACGGGCGACATCCCGTCTCTTGTTGCACATCTCAAAGATGATCACAAGGTTGACATGCACGACGGGTGTACCTTCAATCATCGCTATGTGAAATCAAATCCACACGAAGTTGAAAACGCTACATGGATGCTAACGGTTTTCAACTGCTTTGGAAGACAGTTCTGCTTGCATTTCGAGGCGTTCCAGCTAGGAACAGCGCCTGTTTACATGGCGTTCTTACGATTCATGGGCGAAGATAACGAAGCAAAGAAGTTCAGCTACAGTTTGGAGGTGGGTCACAACGGGCGAAAACTGATATGGCAAGGAATTCCGAGAGGCATCCGTGACAGTCACCGAAAAGTTCGTGACAGTCAAGATGGTCTCATCATTCAAAGAAACCTGGCACTGTATTTTTCGGGGGGAGAAAGACGAGAGCTGAAACTGAGAATCACGGGTCGAATATGGAAAGAAGAATGA

Protein sequence

MAMAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKKFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRITGRIWKEE

Homology

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BLAST of Cp4.1LG10g11930 vs. Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 6.1e-155
Identity = 253/308 (82.14%), Postives = 276/308 (89.61%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSE-NNSTSSKVLLGSSGKLGVYSTNGVQELLEC 62
           MAPG S  KEV++S+ +   +++  +K E NN+  +K      GK G++S NGV ELLEC
Sbjct: 1   MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLEC 60

Query: 63  PVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRY 122
           PVCTNLMYPPI+QCPNGHTLCSNCK+RV N CPTCR+ELGNIRCLALEKVAESLE+PCRY
Sbjct: 61  PVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 120

Query: 123 QNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGC 182
           QNLGC DIFPYYSKLKHEQHCRFRPY CPYAGSECSVTGDIP+LV HLKDDHKVDMHDGC
Sbjct: 121 QNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGC 180

Query: 183 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAK 242
           TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG++NEAK
Sbjct: 181 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK 240

Query: 243 KFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRI 302
           KFSYSLEVG +GRKL WQGIPR IRDSHRKVRDSQDGLII RNLALYFSGG+R+ELKLR+
Sbjct: 241 KFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV 300

Query: 303 TGRIWKEE 310
           TGRIWKEE
Sbjct: 301 TGRIWKEE 308

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BLAST of Cp4.1LG10g11930 vs. Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 8.2e-152
Identity = 250/307 (81.43%), Postives = 274/307 (89.25%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62
           MAPG S  KE ++S+ +   +++ M+K E NS  +K   GS GK   +S+NGV ELLECP
Sbjct: 1   MAPGGSALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKF--HSSNGVYELLECP 60

Query: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122
           VCTNLMYPPI+QCPNGHTLCS+CK+RV N CPTCR+ELGNIRCLALEKVAESLE+PCRYQ
Sbjct: 61  VCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQ 120

Query: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182
           NLGCQDIFPYYSKLKHEQHCRFR Y+CPYAGSECSVTGDIP+LV HLKDDHKVDMHDGCT
Sbjct: 121 NLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCT 180

Query: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG++NEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKK 240

Query: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302
           FSYSLEVG + RKL WQGIPR IRDSHRKVRDSQDGLII RNLALYFSG ++ ELKLR+T
Sbjct: 241 FSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVT 300

Query: 303 GRIWKEE 310
           GRIWKEE
Sbjct: 301 GRIWKEE 305

[Close]

BLAST of Cp4.1LG10g11930 vs. Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 1.8e-130
Identity = 217/294 (73.81%), Postives = 247/294 (84.01%), Query Frame = 1


Query: 16  SHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECPVCTNLMYPPIYQC 75
           S+ SVS H         N+ ++ V   +SG L   +T  V ELLECPVCTN MYPPI+QC
Sbjct: 26  SYASVSKHH------HTNNNTTNVNAAASGLLP--TTTSVHELLECPVCTNSMYPPIHQC 85

Query: 76  PNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYSK 135
            NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAESLE+PC++ +LGC +IFPYYSK
Sbjct: 86  HNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFPYYSK 145

Query: 136 LKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCTFNHRYVKSNPHEV 195
           LKHE  C FRPY+CPYAGSECSVTGDIP LVAHL+DDHKVDMH GCTFNHRYVKSNP EV
Sbjct: 146 LKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREV 205

Query: 196 ENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKKFSYSLEVGHNGRK 255
           ENATWMLTVF+CFG+ FCLHFEAFQLG APVYMAFLRFMG++ EA+ ++YSLEVG  GRK
Sbjct: 206 ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYNYSLEVGGYGRK 265

Query: 256 LIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRITGRIWKEE 310
           LIW+G PR +RDSHRKVRDS DGLIIQRN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 266 LIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 311

[Close]

BLAST of Cp4.1LG10g11930 vs. Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 3.1e-127
Identity = 207/303 (68.32%), Postives = 243/303 (80.20%), Query Frame = 1


Query: 7   SSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECPVCTN 66
           SST  E+  +      +  + +K+   + ++ V+    G         V ELLECPVCT 
Sbjct: 10  SSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYELLECPVCTY 69

Query: 67  LMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQNLGC 126
            MYPPI+QC NGHTLCS CK+RV N CPTCR ELG+IRCLALEKVAESLE+PC++ NLGC
Sbjct: 70  SMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGC 129

Query: 127 QDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCTFNHR 186
            +IFPYYSKLKHE  C FRPY+CPYAGSEC + GDIP LVAHL+DDHKVDMH G TFNHR
Sbjct: 130 PEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHR 189

Query: 187 YVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKKFSYS 246
           YVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLG  PVYMAFLRFMG++ +A+ +SYS
Sbjct: 190 YVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYS 249

Query: 247 LEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRITGRIW 306
           LEVG +GRKL W+G PR IRDSHRKVRDS DGLIIQRN+AL+FSGG+R+ELKLR+TG+IW
Sbjct: 250 LEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIW 309

Query: 307 KEE 310
           KE+
Sbjct: 310 KEQ 312

[Close]

BLAST of Cp4.1LG10g11930 vs. Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 452.2 bits (1162), Expect = 4.5e-126
Identity = 209/295 (70.85%), Postives = 239/295 (81.02%), Query Frame = 1


Query: 15  DSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECPVCTNLMYPPIYQ 74
           DS  SV   D    K + +ST S+        + +     V ELLECPVCTN MYPPI+Q
Sbjct: 4   DSIDSVIDDDEIHQKHQFSSTKSQ----GGATVVISPATSVYELLECPVCTNSMYPPIHQ 63

Query: 75  CPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYS 134
           C NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y NLGC  IFPYYS
Sbjct: 64  CHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYS 123

Query: 135 KLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCTFNHRYVKSNPHE 194
           KLKHE  C FRPY+CPYAGSEC+  GDI  LVAHL+DDHKVDMH GCTFNHRYVKSNP E
Sbjct: 124 KLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVDMHTGCTFNHRYVKSNPRE 183

Query: 195 VENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKKFSYSLEVGHNGR 254
           VENATWMLTVF CFG+ FCLHFEAFQLG APVYMAFLRFMG++++A+ ++YSLEVG +GR
Sbjct: 184 VENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEDDARNYTYSLEVGGSGR 243

Query: 255 KLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRITGRIWKEE 310
           K  W+G PR +RDSHRKVRDS DGLIIQRN+AL+FSGG+++ELKLR+TGRIWKE+
Sbjct: 244 KQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 294

[Close]

BLAST of Cp4.1LG10g11930 vs. TrEMBL
Match: B9T806_RICCO (E3 ubiquitin-protein ligase OS=Ricinus communis GN=RCOM_0446280 PE=3 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 1.8e-161
Identity = 263/307 (85.67%), Postives = 287/307 (93.49%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62
           MAPG S CKEV++SHP++S ++I  +K+ENNST +K   G  GK G+YS NGV ELLECP
Sbjct: 1   MAPGGSACKEVLESHPAISDYEIGTAKTENNSTVTK---GLGGKQGLYSNNGVHELLECP 60

Query: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122
           VCTNLMYPPI+QCPNGHTLCSNCK RV NCCPTCR++LGNIRCLALEKVAESLE+PC+YQ
Sbjct: 61  VCTNLMYPPIHQCPNGHTLCSNCKSRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKYQ 120

Query: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182
           +LGC DIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIP+LVAHLKDDHKVDMHDGCT
Sbjct: 121 DLGCHDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPTLVAHLKDDHKVDMHDGCT 180

Query: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ+G APVYMAFLRFMG+DNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQIGMAPVYMAFLRFMGDDNEAKK 240

Query: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302
           FSYSLEVG NGRKLIWQGIPR IRDSHRKVRDSQDGLIIQR+LALYFSGG+R+ELKLRIT
Sbjct: 241 FSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSQDGLIIQRSLALYFSGGDRQELKLRIT 300

Query: 303 GRIWKEE 310
           GRIWKEE
Sbjct: 301 GRIWKEE 304

[Close]

BLAST of Cp4.1LG10g11930 vs. TrEMBL
Match: A0A0D2QH79_GOSRA (E3 ubiquitin-protein ligase OS=Gossypium raimondii GN=B456_002G223600 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 6.7e-161
Identity = 263/314 (83.76%), Postives = 288/314 (91.72%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSS-------KVLLGSSGKLGVYSTNGV 62
           MAPG + CKEV++SH  V+ +DIA +KSE+N+ +S       K  +   GK G++S NGV
Sbjct: 1   MAPGGNACKEVIESHSPVADYDIASAKSESNNATSTTTTATMKTSVNLVGKHGIHSNNGV 60

Query: 63  QELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESL 122
            ELLECPVCTNLMYPPI+QCPNGHTLCSNCKIRV NCCPTCR++LGNIRCLALEKVAESL
Sbjct: 61  YELLECPVCTNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCRYDLGNIRCLALEKVAESL 120

Query: 123 EIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKV 182
           E+PC+YQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGS+CSVTGDIP+LV+HLKDDHKV
Sbjct: 121 ELPCKYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSDCSVTGDIPTLVSHLKDDHKV 180

Query: 183 DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMG 242
           DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG
Sbjct: 181 DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMG 240

Query: 243 EDNEAKKFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERR 302
           +DNEAKKFSYSLEVG NGRKLIWQGIPR IRDSHRKVRDSQDGL+IQRNLALYFSGG+R+
Sbjct: 241 DDNEAKKFSYSLEVGANGRKLIWQGIPRSIRDSHRKVRDSQDGLVIQRNLALYFSGGDRQ 300

Query: 303 ELKLRITGRIWKEE 310
           ELKLR+TGRIWKEE
Sbjct: 301 ELKLRVTGRIWKEE 314

[Close]

BLAST of Cp4.1LG10g11930 vs. TrEMBL
Match: A0A061EYN3_THECC (E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_024949 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 6.7e-161
Identity = 263/307 (85.67%), Postives = 285/307 (92.83%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62
           MAPG S CKEVV+SHPSV+ +DIA +KSE+N+T+ K  +   GK G++S NGV ELLECP
Sbjct: 1   MAPGGSACKEVVESHPSVADYDIATAKSESNTTTMKSPVSLLGKHGIHSNNGVYELLECP 60

Query: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122
           VCTNLMYPPI+QCPNGHTLCSNCKIRV NCCPTC ++LGNIRCLALEKVAESLE+PC+YQ
Sbjct: 61  VCTNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCCYDLGNIRCLALEKVAESLELPCKYQ 120

Query: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182
           NLGC DIFPYYSKLKHEQHCRF PYNCPYAGSECSVTGDI +LVAHLKDDHKVDMHDGCT
Sbjct: 121 NLGCHDIFPYYSKLKHEQHCRFCPYNCPYAGSECSVTGDISTLVAHLKDDHKVDMHDGCT 180

Query: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242
           FNHRYVKSNPHEVENATWMLTVFNCFG+QFCLHFEAFQ G APVYMAFLRFMG+DNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGKQFCLHFEAFQFGMAPVYMAFLRFMGDDNEAKK 240

Query: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302
           FSYSLEVG NGR+LIWQGIPR IRDSHRKVRDSQDGLIIQRNLALYFSGG+R+ELKLR+T
Sbjct: 241 FSYSLEVGANGRRLIWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRQELKLRVT 300

Query: 303 GRIWKEE 310
           GRIWKEE
Sbjct: 301 GRIWKEE 307

[Close]

BLAST of Cp4.1LG10g11930 vs. TrEMBL
Match: A0A0B0N0M3_GOSAR (E3 ubiquitin-protein ligase OS=Gossypium arboreum GN=F383_33012 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 1.1e-160
Identity = 263/314 (83.76%), Postives = 287/314 (91.40%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSS-------KVLLGSSGKLGVYSTNGV 62
           MAPG S CKEV++SH  V+ +DIA +KSE+N+ +S       K  +   GK G++S NGV
Sbjct: 1   MAPGGSACKEVIESHSPVADYDIASAKSESNNATSTTTTTTMKTSVNLVGKHGIHSNNGV 60

Query: 63  QELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESL 122
            ELLECPVCTNLMYPPI+QCPNGHTLCSNCKIRV NCCPTCR++LGNIRCLALEKVAESL
Sbjct: 61  YELLECPVCTNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCRYDLGNIRCLALEKVAESL 120

Query: 123 EIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKV 182
           E+PC+YQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGS+C VTGDIP+LV+HLKDDHKV
Sbjct: 121 ELPCKYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSDCCVTGDIPTLVSHLKDDHKV 180

Query: 183 DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMG 242
           DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG
Sbjct: 181 DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMG 240

Query: 243 EDNEAKKFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERR 302
           +DNEAKKFSYSLEVG NGRKLIWQGIPR IRDSHRKVRDSQDGL+IQRNLALYFSGG+R+
Sbjct: 241 DDNEAKKFSYSLEVGANGRKLIWQGIPRSIRDSHRKVRDSQDGLVIQRNLALYFSGGDRQ 300

Query: 303 ELKLRITGRIWKEE 310
           ELKLR+TGRIWKEE
Sbjct: 301 ELKLRVTGRIWKEE 314

[Close]

BLAST of Cp4.1LG10g11930 vs. TrEMBL
Match: A0A067JYP2_JATCU (E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_25565 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 5.7e-160
Identity = 261/307 (85.02%), Postives = 282/307 (91.86%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62
           MAPG S CKEV++S P++  +DI  +K ENN T++K      GK GVY+ NGV ELLECP
Sbjct: 1   MAPGGSACKEVLESQPTIPDYDIGTAKVENNITTAKGAPSLGGKHGVYTNNGVHELLECP 60

Query: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122
           VC+NLMYPPI+QCPNGHTLCSNCKIRV NCCPTCR+ELGNIRCLALEKVAESLE+PC+YQ
Sbjct: 61  VCSNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCRYELGNIRCLALEKVAESLELPCKYQ 120

Query: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182
           +LGC DIFPYYSKLKHEQHCRFRPY CPYAGSECSVTGDIP+LVAHLKDDHKVDMHDGCT
Sbjct: 121 DLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPALVAHLKDDHKVDMHDGCT 180

Query: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG+DNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKK 240

Query: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302
           FSYSLEVG NGRKL WQGIPR IRDSHRKVRDSQDGLIIQR+LALYFSGG+R+ELKLR+T
Sbjct: 241 FSYSLEVGGNGRKLTWQGIPRSIRDSHRKVRDSQDGLIIQRSLALYFSGGDRQELKLRVT 300

Query: 303 GRIWKEE 310
           GRIWKEE
Sbjct: 301 GRIWKEE 307

[Close]

BLAST of Cp4.1LG10g11930 vs. TAIR10
Match: AT3G58040.1 (AT3G58040.1 seven in absentia of Arabidopsis 2)

HSP 1 Score: 548.1 bits (1411), Expect = 3.4e-156
Identity = 253/308 (82.14%), Postives = 276/308 (89.61%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSE-NNSTSSKVLLGSSGKLGVYSTNGVQELLEC 62
           MAPG S  KEV++S+ +   +++  +K E NN+  +K      GK G++S NGV ELLEC
Sbjct: 1   MAPGGSALKEVMESNSTGMDYEVKTAKVEVNNNKPTKPGSAGIGKYGIHSNNGVYELLEC 60

Query: 63  PVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRY 122
           PVCTNLMYPPI+QCPNGHTLCSNCK+RV N CPTCR+ELGNIRCLALEKVAESLE+PCRY
Sbjct: 61  PVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRY 120

Query: 123 QNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGC 182
           QNLGC DIFPYYSKLKHEQHCRFRPY CPYAGSECSVTGDIP+LV HLKDDHKVDMHDGC
Sbjct: 121 QNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHKVDMHDGC 180

Query: 183 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAK 242
           TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG++NEAK
Sbjct: 181 TFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAK 240

Query: 243 KFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRI 302
           KFSYSLEVG +GRKL WQGIPR IRDSHRKVRDSQDGLII RNLALYFSGG+R+ELKLR+
Sbjct: 241 KFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDRQELKLRV 300

Query: 303 TGRIWKEE 310
           TGRIWKEE
Sbjct: 301 TGRIWKEE 308

[Close]

BLAST of Cp4.1LG10g11930 vs. TAIR10
Match: AT2G41980.1 (AT2G41980.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 537.7 bits (1384), Expect = 4.6e-153
Identity = 250/307 (81.43%), Postives = 274/307 (89.25%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62
           MAPG S  KE ++S+ +   +++ M+K E NS  +K   GS GK   +S+NGV ELLECP
Sbjct: 1   MAPGGSALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKF--HSSNGVYELLECP 60

Query: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122
           VCTNLMYPPI+QCPNGHTLCS+CK+RV N CPTCR+ELGNIRCLALEKVAESLE+PCRYQ
Sbjct: 61  VCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQ 120

Query: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182
           NLGCQDIFPYYSKLKHEQHCRFR Y+CPYAGSECSVTGDIP+LV HLKDDHKVDMHDGCT
Sbjct: 121 NLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCT 180

Query: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG++NEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKK 240

Query: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302
           FSYSLEVG + RKL WQGIPR IRDSHRKVRDSQDGLII RNLALYFSG ++ ELKLR+T
Sbjct: 241 FSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVT 300

Query: 303 GRIWKEE 310
           GRIWKEE
Sbjct: 301 GRIWKEE 305

[Close]

BLAST of Cp4.1LG10g11930 vs. TAIR10
Match: AT3G61790.1 (AT3G61790.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 466.8 bits (1200), Expect = 1.0e-131
Identity = 217/294 (73.81%), Postives = 247/294 (84.01%), Query Frame = 1


Query: 16  SHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECPVCTNLMYPPIYQC 75
           S+ SVS H         N+ ++ V   +SG L   +T  V ELLECPVCTN MYPPI+QC
Sbjct: 26  SYASVSKHH------HTNNNTTNVNAAASGLLP--TTTSVHELLECPVCTNSMYPPIHQC 85

Query: 76  PNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQNLGCQDIFPYYSK 135
            NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAESLE+PC++ +LGC +IFPYYSK
Sbjct: 86  HNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFPYYSK 145

Query: 136 LKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCTFNHRYVKSNPHEV 195
           LKHE  C FRPY+CPYAGSECSVTGDIP LVAHL+DDHKVDMH GCTFNHRYVKSNP EV
Sbjct: 146 LKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREV 205

Query: 196 ENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKKFSYSLEVGHNGRK 255
           ENATWMLTVF+CFG+ FCLHFEAFQLG APVYMAFLRFMG++ EA+ ++YSLEVG  GRK
Sbjct: 206 ENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNYNYSLEVGGYGRK 265

Query: 256 LIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRITGRIWKEE 310
           LIW+G PR +RDSHRKVRDS DGLIIQRN+AL+FSGG+R+ELKLR+TGRIWKE+
Sbjct: 266 LIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 311

[Close]

BLAST of Cp4.1LG10g11930 vs. TAIR10
Match: AT4G27880.1 (AT4G27880.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 456.1 bits (1172), Expect = 1.8e-128
Identity = 207/303 (68.32%), Postives = 243/303 (80.20%), Query Frame = 1


Query: 7   SSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECPVCTN 66
           SST  E+  +      +  + +K+   + ++ V+    G         V ELLECPVCT 
Sbjct: 10  SSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYELLECPVCTY 69

Query: 67  LMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQNLGC 126
            MYPPI+QC NGHTLCS CK+RV N CPTCR ELG+IRCLALEKVAESLE+PC++ NLGC
Sbjct: 70  SMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGC 129

Query: 127 QDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCTFNHR 186
            +IFPYYSKLKHE  C FRPY+CPYAGSEC + GDIP LVAHL+DDHKVDMH G TFNHR
Sbjct: 130 PEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHR 189

Query: 187 YVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKKFSYS 246
           YVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLG  PVYMAFLRFMG++ +A+ +SYS
Sbjct: 190 YVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYS 249

Query: 247 LEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRITGRIW 306
           LEVG +GRKL W+G PR IRDSHRKVRDS DGLIIQRN+AL+FSGG+R+ELKLR+TG+IW
Sbjct: 250 LEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIW 309

Query: 307 KEE 310
           KE+
Sbjct: 310 KEQ 312

[Close]

BLAST of Cp4.1LG10g11930 vs. TAIR10
Match: AT5G53360.1 (AT5G53360.1 TRAF-like superfamily protein)

HSP 1 Score: 360.9 bits (925), Expect = 7.7e-100
Identity = 158/204 (77.45%), Postives = 182/204 (89.22%), Query Frame = 1


Query: 106 LALEKVAESLEIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSL 165
           +ALEKVAESLE+PC+Y NLGC  IFPYYSKLKHE  C FRPY+CPYAGSEC+  GDI  L
Sbjct: 15  IALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFL 74

Query: 166 VAHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAP 225
           VAHL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTVF CFG+ FCLHFEAFQLG AP
Sbjct: 75  VAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAP 134

Query: 226 VYMAFLRFMGEDNEAKKFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNL 285
           VYMAFLRFMG++++A+ ++YSLEVG +GRK  W+G PR +RDSHRKVRDS DGLIIQRN+
Sbjct: 135 VYMAFLRFMGDEDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNM 194

Query: 286 ALYFSGGERRELKLRITGRIWKEE 310
           AL+FSGG+++ELKLR+TGRIWKE+
Sbjct: 195 ALFFSGGDKKELKLRVTGRIWKEQ 218

[Close]

BLAST of Cp4.1LG10g11930 vs. NCBI nr
Match: gi|255587731|ref|XP_002534375.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Ricinus communis])

HSP 1 Score: 576.6 bits (1485), Expect = 2.5e-161
Identity = 263/307 (85.67%), Postives = 287/307 (93.49%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62
           MAPG S CKEV++SHP++S ++I  +K+ENNST +K   G  GK G+YS NGV ELLECP
Sbjct: 1   MAPGGSACKEVLESHPAISDYEIGTAKTENNSTVTK---GLGGKQGLYSNNGVHELLECP 60

Query: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122
           VCTNLMYPPI+QCPNGHTLCSNCK RV NCCPTCR++LGNIRCLALEKVAESLE+PC+YQ
Sbjct: 61  VCTNLMYPPIHQCPNGHTLCSNCKSRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKYQ 120

Query: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182
           +LGC DIFPYYSKLKHEQHCRFRPY+CPYAGSECS+TGDIP+LVAHLKDDHKVDMHDGCT
Sbjct: 121 DLGCHDIFPYYSKLKHEQHCRFRPYSCPYAGSECSITGDIPTLVAHLKDDHKVDMHDGCT 180

Query: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQ+G APVYMAFLRFMG+DNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQIGMAPVYMAFLRFMGDDNEAKK 240

Query: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302
           FSYSLEVG NGRKLIWQGIPR IRDSHRKVRDSQDGLIIQR+LALYFSGG+R+ELKLRIT
Sbjct: 241 FSYSLEVGGNGRKLIWQGIPRSIRDSHRKVRDSQDGLIIQRSLALYFSGGDRQELKLRIT 300

Query: 303 GRIWKEE 310
           GRIWKEE
Sbjct: 301 GRIWKEE 304

[Close]

BLAST of Cp4.1LG10g11930 vs. NCBI nr
Match: gi|823136405|ref|XP_012467963.1| (PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Gossypium raimondii])

HSP 1 Score: 574.7 bits (1480), Expect = 9.7e-161
Identity = 263/314 (83.76%), Postives = 288/314 (91.72%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSS-------KVLLGSSGKLGVYSTNGV 62
           MAPG + CKEV++SH  V+ +DIA +KSE+N+ +S       K  +   GK G++S NGV
Sbjct: 1   MAPGGNACKEVIESHSPVADYDIASAKSESNNATSTTTTATMKTSVNLVGKHGIHSNNGV 60

Query: 63  QELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESL 122
            ELLECPVCTNLMYPPI+QCPNGHTLCSNCKIRV NCCPTCR++LGNIRCLALEKVAESL
Sbjct: 61  YELLECPVCTNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCRYDLGNIRCLALEKVAESL 120

Query: 123 EIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKV 182
           E+PC+YQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGS+CSVTGDIP+LV+HLKDDHKV
Sbjct: 121 ELPCKYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSDCSVTGDIPTLVSHLKDDHKV 180

Query: 183 DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMG 242
           DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG
Sbjct: 181 DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMG 240

Query: 243 EDNEAKKFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERR 302
           +DNEAKKFSYSLEVG NGRKLIWQGIPR IRDSHRKVRDSQDGL+IQRNLALYFSGG+R+
Sbjct: 241 DDNEAKKFSYSLEVGANGRKLIWQGIPRSIRDSHRKVRDSQDGLVIQRNLALYFSGGDRQ 300

Query: 303 ELKLRITGRIWKEE 310
           ELKLR+TGRIWKEE
Sbjct: 301 ELKLRVTGRIWKEE 314

[Close]

BLAST of Cp4.1LG10g11930 vs. NCBI nr
Match: gi|590637142|ref|XP_007029035.1| (Seven in absentia of 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 574.7 bits (1480), Expect = 9.7e-161
Identity = 263/307 (85.67%), Postives = 285/307 (92.83%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62
           MAPG S CKEVV+SHPSV+ +DIA +KSE+N+T+ K  +   GK G++S NGV ELLECP
Sbjct: 1   MAPGGSACKEVVESHPSVADYDIATAKSESNTTTMKSPVSLLGKHGIHSNNGVYELLECP 60

Query: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122
           VCTNLMYPPI+QCPNGHTLCSNCKIRV NCCPTC ++LGNIRCLALEKVAESLE+PC+YQ
Sbjct: 61  VCTNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCCYDLGNIRCLALEKVAESLELPCKYQ 120

Query: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182
           NLGC DIFPYYSKLKHEQHCRF PYNCPYAGSECSVTGDI +LVAHLKDDHKVDMHDGCT
Sbjct: 121 NLGCHDIFPYYSKLKHEQHCRFCPYNCPYAGSECSVTGDISTLVAHLKDDHKVDMHDGCT 180

Query: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242
           FNHRYVKSNPHEVENATWMLTVFNCFG+QFCLHFEAFQ G APVYMAFLRFMG+DNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGKQFCLHFEAFQFGMAPVYMAFLRFMGDDNEAKK 240

Query: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302
           FSYSLEVG NGR+LIWQGIPR IRDSHRKVRDSQDGLIIQRNLALYFSGG+R+ELKLR+T
Sbjct: 241 FSYSLEVGANGRRLIWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRQELKLRVT 300

Query: 303 GRIWKEE 310
           GRIWKEE
Sbjct: 301 GRIWKEE 307

[Close]

BLAST of Cp4.1LG10g11930 vs. NCBI nr
Match: gi|728826134|gb|KHG06575.1| (E3 ubiquitin-protein ligase SINAT2 -like protein [Gossypium arboreum])

HSP 1 Score: 573.9 bits (1478), Expect = 1.6e-160
Identity = 263/314 (83.76%), Postives = 287/314 (91.40%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSS-------KVLLGSSGKLGVYSTNGV 62
           MAPG S CKEV++SH  V+ +DIA +KSE+N+ +S       K  +   GK G++S NGV
Sbjct: 1   MAPGGSACKEVIESHSPVADYDIASAKSESNNATSTTTTTTMKTSVNLVGKHGIHSNNGV 60

Query: 63  QELLECPVCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESL 122
            ELLECPVCTNLMYPPI+QCPNGHTLCSNCKIRV NCCPTCR++LGNIRCLALEKVAESL
Sbjct: 61  YELLECPVCTNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCRYDLGNIRCLALEKVAESL 120

Query: 123 EIPCRYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKV 182
           E+PC+YQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGS+C VTGDIP+LV+HLKDDHKV
Sbjct: 121 ELPCKYQNLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSDCCVTGDIPTLVSHLKDDHKV 180

Query: 183 DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMG 242
           DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG
Sbjct: 181 DMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMG 240

Query: 243 EDNEAKKFSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERR 302
           +DNEAKKFSYSLEVG NGRKLIWQGIPR IRDSHRKVRDSQDGL+IQRNLALYFSGG+R+
Sbjct: 241 DDNEAKKFSYSLEVGANGRKLIWQGIPRSIRDSHRKVRDSQDGLVIQRNLALYFSGGDRQ 300

Query: 303 ELKLRITGRIWKEE 310
           ELKLR+TGRIWKEE
Sbjct: 301 ELKLRVTGRIWKEE 314

[Close]

BLAST of Cp4.1LG10g11930 vs. NCBI nr
Match: gi|643710507|gb|KDP24649.1| (hypothetical protein JCGZ_25565 [Jatropha curcas])

HSP 1 Score: 571.6 bits (1472), Expect = 8.2e-160
Identity = 261/307 (85.02%), Postives = 282/307 (91.86%), Query Frame = 1


Query: 3   MAPGSSTCKEVVDSHPSVSGHDIAMSKSENNSTSSKVLLGSSGKLGVYSTNGVQELLECP 62
           MAPG S CKEV++S P++  +DI  +K ENN T++K      GK GVY+ NGV ELLECP
Sbjct: 1   MAPGGSACKEVLESQPTIPDYDIGTAKVENNITTAKGAPSLGGKHGVYTNNGVHELLECP 60

Query: 63  VCTNLMYPPIYQCPNGHTLCSNCKIRVSNCCPTCRHELGNIRCLALEKVAESLEIPCRYQ 122
           VC+NLMYPPI+QCPNGHTLCSNCKIRV NCCPTCR+ELGNIRCLALEKVAESLE+PC+YQ
Sbjct: 61  VCSNLMYPPIHQCPNGHTLCSNCKIRVHNCCPTCRYELGNIRCLALEKVAESLELPCKYQ 120

Query: 123 NLGCQDIFPYYSKLKHEQHCRFRPYNCPYAGSECSVTGDIPSLVAHLKDDHKVDMHDGCT 182
           +LGC DIFPYYSKLKHEQHCRFRPY CPYAGSECSVTGDIP+LVAHLKDDHKVDMHDGCT
Sbjct: 121 DLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPALVAHLKDDHKVDMHDGCT 180

Query: 183 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGEDNEAKK 242
           FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLG APVYMAFLRFMG+DNEAKK
Sbjct: 181 FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKK 240

Query: 243 FSYSLEVGHNGRKLIWQGIPRGIRDSHRKVRDSQDGLIIQRNLALYFSGGERRELKLRIT 302
           FSYSLEVG NGRKL WQGIPR IRDSHRKVRDSQDGLIIQR+LALYFSGG+R+ELKLR+T
Sbjct: 241 FSYSLEVGGNGRKLTWQGIPRSIRDSHRKVRDSQDGLIIQRSLALYFSGGDRQELKLRVT 300

Query: 303 GRIWKEE 310
           GRIWKEE
Sbjct: 301 GRIWKEE 307

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g11930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SINA2_ARATH	6.1e-155	82.14	E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=1 SV=1	[more]
SINA1_ARATH	8.2e-152	81.43	Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE...	[more]
SINA3_ARATH	1.8e-130	73.81	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1	[more]
SINA4_ARATH	3.1e-127	68.32	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1	[more]
SINA5_ARATH	4.5e-126	70.85	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2	[more]

BLAST of Cp4.1LG10g11930 vs. TrEMBL


Match Name	E-value	Identity	Description
B9T806_RICCO	1.8e-161	85.67	E3 ubiquitin-protein ligase OS=Ricinus communis GN=RCOM_0446280 PE=3 SV=1	[more]
A0A0D2QH79_GOSRA	6.7e-161	83.76	E3 ubiquitin-protein ligase OS=Gossypium raimondii GN=B456_002G223600 PE=3 SV=1	[more]
A0A061EYN3_THECC	6.7e-161	85.67	E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_024949 PE=3 SV=1	[more]
A0A0B0N0M3_GOSAR	1.1e-160	83.76	E3 ubiquitin-protein ligase OS=Gossypium arboreum GN=F383_33012 PE=3 SV=1	[more]
A0A067JYP2_JATCU	5.7e-160	85.02	E3 ubiquitin-protein ligase OS=Jatropha curcas GN=JCGZ_25565 PE=3 SV=1	[more]

BLAST of Cp4.1LG10g11930 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G58040.1	3.4e-156	82.14	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	4.6e-153	81.43	Protein with RING/U-box and TRAF-like domains	[more]
AT3G61790.1	1.0e-131	73.81	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	1.8e-128	68.32	Protein with RING/U-box and TRAF-like domains	[more]
AT5G53360.1	7.7e-100	77.45	TRAF-like superfamily protein	[more]

BLAST of Cp4.1LG10g11930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|255587731\|ref\|XP_002534375.1\|	2.5e-161	85.67	PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Ricinus communis]	[more]
gi\|823136405\|ref\|XP_012467963.1\|	9.7e-161	83.76	PREDICTED: E3 ubiquitin-protein ligase SINAT2 [Gossypium raimondii]	[more]
gi\|590637142\|ref\|XP_007029035.1\|	9.7e-161	85.67	Seven in absentia of 2 isoform 1 [Theobroma cacao]	[more]
gi\|728826134\|gb\|KHG06575.1\|	1.6e-160	83.76	E3 ubiquitin-protein ligase SINAT2 -like protein [Gossypium arboreum]	[more]
gi\|643710507\|gb\|KDP24649.1\|	8.2e-160	85.02	hypothetical protein JCGZ_25565 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination
GO:0007275	multicellular organism development
GO:0006511	ubiquitin-dependent protein catabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004842	ubiquitin-protein transferase activity
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR018121	7-in-absentia-prot_TRAF-dom
IPR013323	SIAH-type domain
IPR013083	Znf_RING/FYVE/PHD
IPR013010	Znf_SIAH
IPR008974	TRAF-like
IPR004162	SINA-like
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g11930.1	Cp4.1LG10g11930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 61..97 score: 9
IPR004162	E3 ubiquitin-protein ligase SIN-like	PANTHER	PTHR10315	SEVEN IN ABSENTIA HOMOLOG	coord: 49..309 score: 8.7E
IPR008974	TRAF-like	GENE3D	G3DSA:2.60.210.10		coord: 179..306 score: 9.1
IPR008974	TRAF-like	unknown	SSF49599	TRAF domain-like	coord: 114..306 score: 9.15
IPR013010	Zinc finger, SIAH-type	PROFILE	PS51081	ZF_SIAH	coord: 114..174 score: 1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 54..127 score: 5.7
IPR013323	SIAH-type domain	GENE3D	G3DSA:3.90.890.10		coord: 128..169 score: 2.1
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 103..302 score: 4.4
None	No IPR available	PANTHER	PTHR10315:SF34	E3 UBIQUITIN-PROTEIN LIGASE SINAT3-RELATED	coord: 49..309 score: 8.7E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 55..102 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g11930	CmaCh03G001010	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g11930	CmaCh07G012900	Cucurbita maxima (Rimu)	cmacpeB863
Cp4.1LG10g11930	CmoCh03G001080	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g11930	Cla008045	Watermelon (97103) v1	cpewmB080
Cp4.1LG10g11930	ClCG04G000960	Watermelon (Charleston Gray)	cpewcgB079
Cp4.1LG10g11930	Lsi01G019380	Bottle gourd (USVL1VR-Ls)	cpelsiB055
Cp4.1LG10g11930	Bhi03G002193	Wax gourd	cpewgoB0104
Cp4.1LG10g11930	Carg12720	Silver-seed gourd	carcpeB0398
Cp4.1LG10g11930	Carg25726	Silver-seed gourd	carcpeB1196

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG10g11930	Cp4.1LG19g00830	Cucurbita pepo (Zucchini)	cpecpeB085

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g11930	Cucurbita moschata (Rifu)	cmocpeB803
Cp4.1LG10g11930	Wild cucumber (PI 183967)	cpecpiB066
Cp4.1LG10g11930	Cucumber (Chinese Long) v2	cpecuB071
Cp4.1LG10g11930	Melon (DHL92) v3.5.1	cpemeB072
Cp4.1LG10g11930	Cucumber (Gy14) v2	cgybcpeB464
Cp4.1LG10g11930	Melon (DHL92) v3.6.1	cpemedB087
Cp4.1LG10g11930	Melon (DHL92) v3.6.1	cpemedB095
Cp4.1LG10g11930	Cucumber (Chinese Long) v3	cpecucB0076
Cp4.1LG10g11930	Cucurbita pepo (Zucchini)	cpecpeB079
Cp4.1LG10g11930	Cucumber (Gy14) v1	cgycpeB0931