Cp4.1LG10g11810 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g11810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Cornichon family protein
Location	Cp4.1LG10 : 8587792 .. 8593155 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAACACTAACACGAACCATTGGATTAAAAGTTTGGGAACATGGTTAGAATTTGTTTAATATTGAGCGGCTAAATGGACATATTTCTAGAAGTATGCGACTAAATTTGTAAATTCAACTGTTCTTATAAACGGGAGCAAATTGTGATTGAAATTTTGATTCAACTTAGAAATTTGGTTGAGAGTTGAAGCAACATGGAATCACTGAAACTTCAATGCAGCATCTAAAGTTCATATTCCCAAGAACATTCAAGAATCTTCAATTCTTGAATTTCCTGAAGCTGAGCGGTTGCAGAAATGGCGTGGGATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGGTGCGTCTTTTTTAATTTCATGAACCCTAGTTTCGGAATCACTAATAGGTTAAGTTGCTGATTGCTTTCCGAGGAAGTCTAAATGCGTCTGCTGAAACGTAGCCCGATTCTTCTTGTTGTTGTTGTGCAATCCTGTGGTAGCTTATTCAGTAAGGAGTCGAGGGTTGATGCTTATCTGAGATTCGTTTTGCTGCGACAGAGCATTTCGACCTCAATTTCTCGACCTGAAATAGAGTTATAACTTCGTACCATTTCACCGTTTTCTCTTGCTTTCTTAACCAATCAGTAGAATAGTCAACTTTACGGTGATGAATCTTGGTCCTTTCCTTTTGCATCCGAGTTTACAATGTAATTTTACGTTGTTAAGTGTTCTTGTAGTCTTTAGAGACGTGGCTGTATGTATATCTTGTGGGGATGAACGATGATAAATGTATTTCAACTAGAAAACTGATTTATATTATTATAGTTGATACCTTGTTTCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGAAATAAAATTGGTCCCAATGTTCCTGTATATCTTGTGGGGATGAACGATAGTAAATGAATTTCAACTAGAAAACTGACTTCTATTAGTATAGTTCATACCTTGTTTCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGAAATAAAATTGGTCCCAATGTTCATGTACAATGGTCATCAGTTGATTGTGGGCTATGCTCCCATTTCATTTACTACGTTCATGTACAATGGCAGGAGGAGGGAAGTGACTGCTCTTATTTTCGAATGAACTATGATAATTTCTTCTCTTTATTGCTTTATATGATTTTATGGGCTTGATGACTATTTAGCGTTTCCATTTATAGATCAATATCACTAGCCATTGCAAAGAGTAGTATTAATTCTCTAGGGATATTTGTACATCCTGTTGGAAGCGTCTAATGGTTGTGATTGGTCTTTTTGTAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTAAGTATTTCTTGACATTAATATGAGGCATGATTTATTTTTCCTTTTGCTTTGTGTAATGTATGACATATAATGCTGGTGTTTCTTTGTTATTTATGATACCCCTTTATTGTCTAAAGTGTTATGGATGCCAATATGAATATAACTCAATGAGTTAAGACATTATACTCTCGATCAAGAGGTCAGAGGTTTGAATCCCCCCACCCTCATGTTTTTGTACTCTCTAAGGTGTTATAGATGAGGCTTATGATGTTCTTTACTTGTAAAGTGGATCAAGCTTGCACTCATATTTATATACTTTTTTCTTTTGTTATGGAAAAAAGATTATATATGAGTTTCTTACTCTGTTAATATGTTTTATTTTTATTATTAAGCACAGTATTCTTAGAGATGCAAACATGTGAAAACTAGTTGGAAGGCTTAAGAACATCGAATATTTTCTCTCTGAAGTTGAGATGGTCGTTTCTAGAATGAGTGAACTGTAGATACCTATAATTGTCAAATTAACTTTTGGTAATAGTTCTCCCTCTGTATGAGGGATTAGATATGTTTTCCGTCATTGGGTGCATTTCAGCATGTTCTGATGCTTTTGGGGAGTATTAGAGCCAGGAGGAGCTTATAATTTTAGATAATCAATGATTAATGTTTTTGGTGGCACAATGAGCTCATAAGCTGAGATTTACGGTTTATAATTTCGATATCCCACCTCGGTTGGGGAGGAGAACAAAAAATTCTTTATAAGGCTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGGAAAACCCGAAAAGGAAAGCTCAAAGAGGACAATATATGCTAGCGGTGGGCTAAGGCTGTTACAAATGGTATTAGAGCCAAACACCGAGTGATGTGTCAGCAAGGAGGTTGAGCCTCGAAGGGGGTGGACATGAGGTTGTGTGCCAGCAAGGTCGCTAGACCCGTAAGGGGGGTGGATTNGGGGGGGGGTGGATTGTGAGATCCCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAAACTGAGGGAAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTGGGCAGTTGACTCCTACTGACATGGTTTTTAAATTGATTTTCATCGTCTCCCTTTATTGGGCTGCTTCCATGTTTTTCAATATGTAAATGACTTTTGTGGAATATTCTCTATTGTAGTGTTCTCTCTGTACTTACCTACATTCTTTTCTGAAGTTATTCATTTAGTTTTAATCTTGTATTTTGTTTTGAACTAACTTATAAAGTTGAGTATCTTGCGACTTGGGTGGTATAGCCACCTCTGTGGCAGTAAGCGTGAATCAAAGATTTATGAGAGAAATGTTCTGACTCAAGCTACTAAAATCTAGAATCGATTAGGCTAAACGATATCCAACTTGGTTGAAATGGATAACCATTCGTCCACATCTTTGCAATGGTACTACCTTTTGAAACTGAGCATTCACTCACCTTGATCATAATGAGTTGATGATTGCATATTGAACGGGTCTTATTGACTAAAGCACTGAAAGTAAACATTTTTTTTTTTTTGCATATATTACTTTTTCATCAATATAAAATGAAGCTAGGATTTTTGCTATTCTTAAAAGATAAAGGTATAGAAAAGAACGTTGATGCTGGCCAAGACTAAGTACCAATGTATAACTAAACTAGGCTTAGATAGAATAGTGGTTTACAACTATGATGTTTGACGGAAATAAAAGAGAGATGAGTAGATCTATAGAAAATAGAAGATCAACTAAGTATTGCACTCTTGGAGATTGTGAACCATACAATGGAAAATTTTGTTGCACCACACTGATGTACGAAGAATATAAATAAATACAGATGGTTTAACAGTTAAATGATAACCTATGTAATTTCATTCTGATTAAGGGAGTAGCGCATGCTTGTTTTTGGATACTTTTGTTGTAATTACTATCAACTACCAAAAGGACTCTATATTCGAGATTCTTGATAAACCAATTATCCTGGTGCCTATTGTTGCTTTGTTCTTTTTTTTCTGAACATTCTTATTCCATGTAGCTATTCCAGTAATATACTGAAATTTAATTCCATTAGATATGTTCTCCGTCGACTGCATTACACCACTTATTGTTTGAATCTTAGATGCTTTAAATAAGTATAATTGATTTTCAGTGATGGCTTGAAAATAATGCCTTCTTAAAGAACAAAACTAGAGTTTTCAAATGTATGATATCCTATTGTTTGAGGATCCTGCAAATATGTTTTTAATAGATTCTCAGTGATAGATAGACGTCTACTGCTGGTATTTTTTAGAAATAAAACTAAAATTTTCTAGATGAAAGTTTCTATTCCACTAGTTGGACTGAGAATTTTCAAGCATTTCCCTGTTTTTGTGTGTATATGATGTATATTATCCGGTTACAATGTCCCAGGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAACTCTTAAGCGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGGTAAGTCTGCAATTTCATTGTTTCTTTCTTAACTATTTAGAAAGTGATATCCTTTCTGATTGGAGTTTCCTTGTTTTCTGTATAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAGAGTATTTATTTCACCATTTAGCTTGAAGTTGAATCCATCATCTGTTTCAAAATTCGTATATGATTACATGAGAAATTATCTACTCTTTTATTCATTGCAAAGTTCTTAAAAGATAATACTGTTGCACTGATTTTGACACTGTTATGTTGCCTTGGCGCCAGTATGTTGTTAATAACGCATGACTCCAGGATCTTGAACTTTGTTCTGTTAGCAAATCTTGCTTCTTTCTAGCTTTTGCTGGTCCTGTATGTGCGCTATAAATTAAGTTAGAATGTTCAATAGCTCTTCATACATTAAAGATTTAGCTTTCTGTAGTTTTATGGATGACTTCCATGCTTTTGACATCCTGGTACATGTGCACTCGCATACACACAATTCTCCGTTATGTATCGTGGATTCATTTCGGATTCATTTCGTCTTAACGATAAAGATAAAGCACGAACATGGACATTATTCATTCCGAATTTCACCTGTCATACTAGCATTCTTACATGTATTAAATTAACATGAATTGCAGGCTTACTTTGTCTGCTTTCAACTCTTTATCTGATGAAGACGATGTCCTACATTTATTTTGATCGCCACTCTTATCCGAAGTTTGTGTATTACGGGTTCTAAAGCGTGTCTAGTCAATATTTGTATGGGAGTTACACGAAGGAAACGAATTTGGACTTGGCAACTTCAAACACACTCAAACAGGTTTTTCCTCCCATTCCCATCCTTTGGCTTGGTAGGCTCCATTAGCAATGTCATTGGGTCAATACCTGTAGCAGAGGATAGAAGTTCATATGTTTTCCAATTAAAAATGATGTTATTGTAGAATGAATTTTAGCCTTGTAGGCAGTTATGATTGTCAATTTTAGCATTTTTCTTCCTTTTGCGATTACATGGATTATACTGATTTGCACGTATCTAGTAGCTTCAGGGATCTTCAGGATTAGGGTCTCATATTTGCACAGTTTTGGAATATCAACTAGTTTCAATTTGTAGTATTCTTGTAAGGATTGAAAGAAATTTTATCATTCTATGTCAACAAAACAAATATATTAAGTGTTGATGCCTACAAATGATAAGTTTCAA

mRNA sequence

TCTAACACTAACACGAACCATTGGATTAAAAGTTTGGGAACATGGTTAGAATTTGTTTAATATTGAGCGGCTAAATGGACATATTTCTAGAAGTATGCGACTAAATTTGTAAATTCAACTGTTCTTATAAACGGGAGCAAATTGTGATTGAAATTTTGATTCAACTTAGAAATTTGGTTGAGAGTTGAAGCAACATGGAATCACTGAAACTTCAATGCAGCATCTAAAGTTCATATTCCCAAGAACATTCAAGAATCTTCAATTCTTGAATTTCCTGAAGCTGAGCGGTTGCAGAAATGGCGTGGGATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAACTCTTAAGCGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAGAGCTTACTTTGTCTGCTTTCAACTCTTTATCTGATGAAGACGATGTCCTACATTTATTTTGATCGCCACTCTTATCCGAAGTTTGTGTATTACGGGTTCTAAAGCGTGTCTAGTCAATATTTGTATGGGAGTTACACGAAGGAAACGAATTTGGACTTGGCAACTTCAAACACACTCAAACAGGTTTTTCCTCCCATTCCCATCCTTTGGCTTGGTAGGCTCCATTAGCAATGTCATTGGGTCAATACCTGTAGCAGAGGATAGAAGTTCATATGTTTTCCAATTAAAAATGATGTTATTGTAGAATGAATTTTAGCCTTGTAGGCAGTTATGATTGTCAATTTTAGCATTTTTCTTCCTTTTGCGATTACATGGATTATACTGATTTGCACGTATCTAGTAGCTTCAGGGATCTTCAGGATTAGGGTCTCATATTTGCACAGTTTTGGAATATCAACTAGTTTCAATTTGTAGTATTCTTGTAAGGATTGAAAGAAATTTTATCATTCTATGTCAACAAAACAAATATATTAAGTGTTGATGCCTACAAATGATAAGTTTCAA

Coding sequence (CDS)

ATGCAGCATCTAAAGTTCATATTCCCAAGAACATTCAAGAATCTTCAATTCTTGAATTTCCTGAAGCTGAGCGGTTGCAGAAATGGCGTGGGATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAACTCTTAAGCGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAG

Protein sequence

MQHLKFIFPRTFKNLQFLNFLKLSGCRNGVGSDLLVHLFLYQRRPPRPQLLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF

Homology

[Close]

BLAST of Cp4.1LG10g11810 vs. Swiss-Prot
Match: CNIH1_ARATH (Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-25
Identity = 61/116 (52.59%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADYLN +++S+RIN+LVIPEF++QG  C LFL T HW  FL+ VPV+ YH  L+ 
Sbjct: 29  LTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAMLYK 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDD 167
           ++ +LIDVTEVFR +  EK  R  KL FY+ LF++V+FR+ + A    V+    DD
Sbjct: 89  ERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSA----VYSFTEDD 140

[Close]

BLAST of Cp4.1LG10g11810 vs. Swiss-Prot
Match: CNIH2_ARATH (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 7.7e-22
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P   Y+ +L+ 
Sbjct: 20  LADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYS 79

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 155
           K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 80  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of Cp4.1LG10g11810 vs. Swiss-Prot
Match: CNIH4_ARATH (Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.7e-22
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P   Y+ +L+ 
Sbjct: 28  LADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYS 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 155
           K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 88  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 131

[Close]

BLAST of Cp4.1LG10g11810 vs. Swiss-Prot
Match: CNIH3_ARATH (Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-20
Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L TGHWFM L+ VP   Y+ +L+ 
Sbjct: 28  LADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYS 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRII 152
           +K+HLIDVTE+F  L  EK  RL KL + +L   + IF +I
Sbjct: 88  RKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLI 128

[Close]

BLAST of Cp4.1LG10g11810 vs. Swiss-Prot
Match: ERV14_YEAST (ER-derived vesicles protein ERV14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV14 PE=1 SV=3)

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-17
Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           L  DLEADY+N  +  S++NKL+ PE  + G    LFL  G+WF+FL+ +PV  Y++N  
Sbjct: 26  LYADLEADYINPIELCSKVNKLITPEAALHGALSLLFLLNGYWFVFLLNLPVLAYNLNKI 85

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIM 153
             K  L+D TE+FRTL + K     KL F+LL+F   ++R+IM
Sbjct: 86  YNKVQLLDATEIFRTLGKHKRESFLKLGFHLLMFFFYLYRMIM 128

[Close]

BLAST of Cp4.1LG10g11810 vs. TrEMBL
Match: A5C5A1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035789 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.0e-34
Identity = 77/133 (57.89%), Postives = 103/133 (77.44%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADY+N Y+SSSRIN +V+P+F++QGV C LFL T HWF+FLI+VP++CY+  LF+
Sbjct: 29  LSDLEADYMNPYESSSRINSIVVPDFILQGVLCILFLLTWHWFLFLISVPITCYNAMLFM 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRI-------IMVAGMKSVFDSA 170
           K++HLIDVTEVFRTL  EK +R+AKL FYL LF++VI R        I+ AG  S++ S 
Sbjct: 89  KRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFLFIIVIIRFSLLFGYRILAAGSLSLYQS- 148

Query: 171 PDDIDIRSTVLEF 177
            +++DIRS+ LEF
Sbjct: 149 EEELDIRSSFLEF 160

[Close]

BLAST of Cp4.1LG10g11810 vs. TrEMBL
Match: A0A0B2SN34_GLYSO (Protein cornichon like 1 OS=Glycine soja GN=glysoja_042255 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-32
Identity = 72/127 (56.69%), Postives = 97/127 (76.38%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLE+DY+N +D++SRIN  V+PEFV QG  C+L LFTGHWFMFL+TVPV+CYH+ L+
Sbjct: 29  ILSDLESDYINPFDAASRINYFVLPEFVGQGALCALCLFTGHWFMFLLTVPVTCYHLRLY 88

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           +K+EHLIDVTEVFR L  EK +R+AKL  YL + +V IFR I+ AG   ++ S  +++DI
Sbjct: 89  VKREHLIDVTEVFRVLNAEKKYRIAKLALYLTVLIVTIFR-ILAAGRVILYSSKFEELDI 148

Query: 170 RSTVLEF 177
           R   + F
Sbjct: 149 RLNPIGF 154

[Close]

BLAST of Cp4.1LG10g11810 vs. TrEMBL
Match: K7LIA5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G093400 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-32
Identity = 72/127 (56.69%), Postives = 97/127 (76.38%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLE+DY+N +D++SRIN  V+PEFV QG  C+L LFTGHWFMFL+TVPV+CYH+ L+
Sbjct: 29  ILSDLESDYINPFDAASRINYFVLPEFVGQGALCALCLFTGHWFMFLLTVPVTCYHLRLY 88

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           +K+EHLIDVTEVFR L  EK +R+AKL  YL + +V IFR I+ AG   ++ S  +++DI
Sbjct: 89  VKREHLIDVTEVFRVLNAEKKYRIAKLALYLTVLIVTIFR-ILAAGRVILYSSKFEELDI 148

Query: 170 RSTVLEF 177
           R   + F
Sbjct: 149 RLNPIGF 154

[Close]

BLAST of Cp4.1LG10g11810 vs. TrEMBL
Match: A0A0J8CTK3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060880 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADY+N Y+SS+ IN +++PEF +Q  FC+LFL TGHW MFL+T+PV+ YH  LF 
Sbjct: 4   LSDLEADYMNPYESSTNINSMILPEFGLQAAFCALFLLTGHWLMFLVTLPVAIYHARLFT 63

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRI-IMVAGMKSVFDSAPDDIDI 170
           + EHL+DVTE+FR L  EK +R  KL+ YLL F +VIFR         S+F S P D+DI
Sbjct: 64  RGEHLVDVTEIFRALSLEKKYRFVKLVLYLLFFFLVIFRFPTGSVSSLSIFSSTPGDLDI 123

Query: 171 RSTVLEF 177
           RS+ LEF
Sbjct: 124 RSSFLEF 130

[Close]

BLAST of Cp4.1LG10g11810 vs. TrEMBL
Match: A0A0S3SU99_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G335300 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.3e-31
Identity = 70/124 (56.45%), Postives = 94/124 (75.81%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLE+DY+N +D+SSRIN  V+PEF+ QG  C+L LFTGHWFMFL+TVPV+CYH  L+
Sbjct: 29  ILSDLESDYVNPFDASSRINYFVLPEFIGQGALCALCLFTGHWFMFLLTVPVTCYHARLY 88

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           +K+EHLIDVTEVFR +  EK FR+ KL  YL + +V IFR ++ AG    ++S   ++DI
Sbjct: 89  VKREHLIDVTEVFRVVNAEKKFRIVKLALYLTVLIVTIFR-MLAAGTIIFYNSKFQELDI 148

Query: 170 RSTV 174
           RS +
Sbjct: 149 RSNL 151

[Close]

BLAST of Cp4.1LG10g11810 vs. TAIR10
Match: AT3G12180.1 (AT3G12180.1 Cornichon family protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 61/116 (52.59%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADYLN +++S+RIN+LVIPEF++QG  C LFL T HW  FL+ VPV+ YH  L+ 
Sbjct: 29  LTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAMLYK 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDD 167
           ++ +LIDVTEVFR +  EK  R  KL FY+ LF++V+FR+ + A    V+    DD
Sbjct: 89  ERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSA----VYSFTEDD 140

[Close]

BLAST of Cp4.1LG10g11810 vs. TAIR10
Match: AT1G12340.1 (AT1G12340.1 Cornichon family protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.4e-23
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P   Y+ +L+ 
Sbjct: 20  LADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYS 79

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 155
           K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 80  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of Cp4.1LG10g11810 vs. TAIR10
Match: AT1G12390.1 (AT1G12390.1 Cornichon family protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.4e-23
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P   Y+ +L+ 
Sbjct: 28  LADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYS 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 155
           K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 88  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 131

[Close]

BLAST of Cp4.1LG10g11810 vs. TAIR10
Match: AT1G62880.1 (AT1G62880.1 Cornichon family protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L TGHWFM L+ VP   Y+ +L+ 
Sbjct: 28  LADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYS 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRII 152
           +K+HLIDVTE+F  L  EK  RL KL + +L   + IF +I
Sbjct: 88  RKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLI 128

[Close]

BLAST of Cp4.1LG10g11810 vs. TAIR10
Match: AT4G12090.1 (AT4G12090.1 Cornichon family protein)

HSP 1 Score: 88.6 bits (218), Expect = 4.2e-18
Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE D +N YD SSRIN++V+PEF +QG+ C  ++ TGHWFM ++++P   Y+I L++
Sbjct: 28  LADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIRLYM 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRII 152
           K+EHL DVTE++ T K E+  R+ K+    L   +  + +I
Sbjct: 88  KREHLADVTELYNTNKWEQKKRVYKIGHIALSIFITTYWLI 128

[Close]

BLAST of Cp4.1LG10g11810 vs. NCBI nr
Match: gi|659083289|ref|XP_008442268.1| (PREDICTED: protein cornichon homolog 1 isoform X1 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 9.7e-57
Identity = 115/127 (90.55%), Postives = 124/127 (97.64%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLEADYLNIYDSSSRINKLV+PEF+VQGVFCSLFLFTGHWFMFLITVPV+CYHINLF
Sbjct: 28  VLTDLEADYLNIYDSSSRINKLVLPEFLVQGVFCSLFLFTGHWFMFLITVPVTCYHINLF 87

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           LK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRIIMVA MKSVFDSAP+DIDI
Sbjct: 88  LKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAEMKSVFDSAPEDIDI 147

Query: 170 RSTVLEF 177
           RS+VLE+
Sbjct: 148 RSSVLEY 154

[Close]

BLAST of Cp4.1LG10g11810 vs. NCBI nr
Match: gi|449453826|ref|XP_004144657.1| (PREDICTED: protein cornichon homolog 1 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-45
Identity = 99/120 (82.50%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLEADYLNIYDSSSRINKLVIPEF+VQGVFCSLFLFTGHWFMFLITVPV+CYHINLF
Sbjct: 28  VLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFLFTGHWFMFLITVPVTCYHINLF 87

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           LK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFLVVIFR+ +     S F+S  D+ D+
Sbjct: 88  LKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTL-----SAFNSLSDEDDV 142

[Close]

BLAST of Cp4.1LG10g11810 vs. NCBI nr
Match: gi|659083291|ref|XP_008442270.1| (PREDICTED: protein cornichon homolog 1 isoform X2 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 96/120 (80.00%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLEADYLNIYDSSSRINKLV+PEF+VQGVFCSLFLFTGHWFMFLITVPV+CYHINLF
Sbjct: 28  VLTDLEADYLNIYDSSSRINKLVLPEFLVQGVFCSLFLFTGHWFMFLITVPVTCYHINLF 87

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           LK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFR+ +     S F+S  D+ ++
Sbjct: 88  LKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTL-----SAFNSLSDEDNV 142

[Close]

BLAST of Cp4.1LG10g11810 vs. NCBI nr
Match: gi|731400005|ref|XP_010653820.1| (PREDICTED: protein cornichon homolog 1 isoform X1 [Vitis vinifera])

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-34
Identity = 77/126 (61.11%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADY+N Y+SSSRIN +V+P+F++QGV C LFL T HWF+FLI+VP++CY+  LF+
Sbjct: 29  LSDLEADYMNPYESSSRINSIVVPDFILQGVLCILFLLTWHWFLFLISVPITCYNAMLFM 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDIR 170
           K++HLIDVTEVFRTL  EK +R+AKL FYL LF++VI R I+ AG  S++ S  +++DIR
Sbjct: 89  KRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFLFIIVIIR-ILAAGSLSLYQS-EEELDIR 148

Query: 171 STVLEF 177
           S+ LEF
Sbjct: 149 SSFLEF 152

[Close]

BLAST of Cp4.1LG10g11810 vs. NCBI nr
Match: gi|147841607|emb|CAN64231.1| (hypothetical protein VITISV_035789 [Vitis vinifera])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 77/133 (57.89%), Postives = 103/133 (77.44%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADY+N Y+SSSRIN +V+P+F++QGV C LFL T HWF+FLI+VP++CY+  LF+
Sbjct: 29  LSDLEADYMNPYESSSRINSIVVPDFILQGVLCILFLLTWHWFLFLISVPITCYNAMLFM 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRI-------IMVAGMKSVFDSA 170
           K++HLIDVTEVFRTL  EK +R+AKL FYL LF++VI R        I+ AG  S++ S 
Sbjct: 89  KRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFLFIIVIIRFSLLFGYRILAAGSLSLYQS- 148

Query: 171 PDDIDIRSTVLEF 177
            +++DIRS+ LEF
Sbjct: 149 EEELDIRSSFLEF 160

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g11810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNIH1_ARATH	2.6e-25	52.59	Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1	[more]
CNIH2_ARATH	7.7e-22	51.92	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 S...	[more]
CNIH4_ARATH	7.7e-22	51.92	Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1	[more]
CNIH3_ARATH	1.9e-20	51.49	Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1	[more]
ERV14_YEAST	2.0e-17	44.66	ER-derived vesicles protein ERV14 OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]

BLAST of Cp4.1LG10g11810 vs. TrEMBL


Match Name	E-value	Identity	Description
A5C5A1_VITVI	8.0e-34	57.89	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035789 PE=4 SV=1	[more]
A0A0B2SN34_GLYSO	4.4e-32	56.69	Protein cornichon like 1 OS=Glycine soja GN=glysoja_042255 PE=4 SV=1	[more]
K7LIA5_SOYBN	4.4e-32	56.69	Uncharacterized protein OS=Glycine max GN=GLYMA_10G093400 PE=4 SV=1	[more]
A0A0J8CTK3_BETVU	1.3e-31	55.91	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060880 PE=4 S...	[more]
A0A0S3SU99_PHAAN	8.3e-31	56.45	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G335300 PE=...	[more]

BLAST of Cp4.1LG10g11810 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12180.1	1.4e-26	52.59	Cornichon family protein	[more]
AT1G12340.1	4.4e-23	51.92	Cornichon family protein	[more]
AT1G12390.1	4.4e-23	51.92	Cornichon family protein	[more]
AT1G62880.1	1.1e-21	51.49	Cornichon family protein	[more]
AT4G12090.1	4.2e-18	44.55	Cornichon family protein	[more]

BLAST of Cp4.1LG10g11810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659083289\|ref\|XP_008442268.1\|	9.7e-57	90.55	PREDICTED: protein cornichon homolog 1 isoform X1 [Cucumis melo]	[more]
gi\|449453826\|ref\|XP_004144657.1\|	1.7e-45	82.50	PREDICTED: protein cornichon homolog 1 [Cucumis sativus]	[more]
gi\|659083291\|ref\|XP_008442270.1\|	1.4e-44	80.00	PREDICTED: protein cornichon homolog 1 isoform X2 [Cucumis melo]	[more]
gi\|731400005\|ref\|XP_010653820.1\|	1.8e-34	61.11	PREDICTED: protein cornichon homolog 1 isoform X1 [Vitis vinifera]	[more]
gi\|147841607\|emb\|CAN64231.1\|	1.2e-33	57.89	hypothetical protein VITISV_035789 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR003377	Cornichon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0006810	transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g11810.1	Cp4.1LG10g11810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 51..148 score: 3.7
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 38..148 score: 4.1
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 50..154 score: 9.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g11810	CmaCh03G000820	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g11810	CmaCh07G013050	Cucurbita maxima (Rimu)	cmacpeB863
Cp4.1LG10g11810	CmoCh07G013500	Cucurbita moschata (Rifu)	cmocpeB803
Cp4.1LG10g11810	CmoCh03G000850	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g11810	Cla008082	Watermelon (97103) v1	cpewmB080
Cp4.1LG10g11810	Csa4G575860	Cucumber (Chinese Long) v2	cpecuB071
Cp4.1LG10g11810	MELO3C009082	Melon (DHL92) v3.5.1	cpemeB072
Cp4.1LG10g11810	ClCG04G000520	Watermelon (Charleston Gray)	cpewcgB079
Cp4.1LG10g11810	Lsi01G019130	Bottle gourd (USVL1VR-Ls)	cpelsiB055
Cp4.1LG10g11810	MELO3C009082.2	Melon (DHL92) v3.6.1	cpemedB094
Cp4.1LG10g11810	CsaV3_4G031560	Cucumber (Chinese Long) v3	cpecucB0076
Cp4.1LG10g11810	Bhi03G002155	Wax gourd	cpewgoB0104
Cp4.1LG10g11810	CsGy4G019800	Cucumber (Gy14) v2	cgybcpeB464
Cp4.1LG10g11810	Carg12732	Silver-seed gourd	carcpeB0398
Cp4.1LG10g11810	Carg22470	Silver-seed gourd	carcpeB0276

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG10g11810	Cp4.1LG19g00760	Cucurbita pepo (Zucchini)	cpecpeB085

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g11810	Cucurbita pepo (Zucchini)	cpecpeB079