Cp4.1LG10g11810.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g11810.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Cornichon family protein
Location	Cp4.1LG10 : 8587792 .. 8593155 (+)
Sequence length	1309

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAACACTAACACGAACCATTGGATTAAAAGTTTGGGAACATGGTTAGAATTTGTTTAATATTGAGCGGCTAAATGGACATATTTCTAGAAGTATGCGACTAAATTTGTAAATTCAACTGTTCTTATAAACGGGAGCAAATTGTGATTGAAATTTTGATTCAACTTAGAAATTTGGTTGAGAGTTGAAGCAACATGGAATCACTGAAACTTCAATGCAGCATCTAAAGTTCATATTCCCAAGAACATTCAAGAATCTTCAATTCTTGAATTTCCTGAAGCTGAGCGGTTGCAGAAATGGCGTGGGATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGGTGCGTCTTTTTTAATTTCATGAACCCTAGTTTCGGAATCACTAATAGGTTAAGTTGCTGATTGCTTTCCGAGGAAGTCTAAATGCGTCTGCTGAAACGTAGCCCGATTCTTCTTGTTGTTGTTGTGCAATCCTGTGGTAGCTTATTCAGTAAGGAGTCGAGGGTTGATGCTTATCTGAGATTCGTTTTGCTGCGACAGAGCATTTCGACCTCAATTTCTCGACCTGAAATAGAGTTATAACTTCGTACCATTTCACCGTTTTCTCTTGCTTTCTTAACCAATCAGTAGAATAGTCAACTTTACGGTGATGAATCTTGGTCCTTTCCTTTTGCATCCGAGTTTACAATGTAATTTTACGTTGTTAAGTGTTCTTGTAGTCTTTAGAGACGTGGCTGTATGTATATCTTGTGGGGATGAACGATGATAAATGTATTTCAACTAGAAAACTGATTTATATTATTATAGTTGATACCTTGTTTCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGAAATAAAATTGGTCCCAATGTTCCTGTATATCTTGTGGGGATGAACGATAGTAAATGAATTTCAACTAGAAAACTGACTTCTATTAGTATAGTTCATACCTTGTTTCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGAAATAAAATTGGTCCCAATGTTCATGTACAATGGTCATCAGTTGATTGTGGGCTATGCTCCCATTTCATTTACTACGTTCATGTACAATGGCAGGAGGAGGGAAGTGACTGCTCTTATTTTCGAATGAACTATGATAATTTCTTCTCTTTATTGCTTTATATGATTTTATGGGCTTGATGACTATTTAGCGTTTCCATTTATAGATCAATATCACTAGCCATTGCAAAGAGTAGTATTAATTCTCTAGGGATATTTGTACATCCTGTTGGAAGCGTCTAATGGTTGTGATTGGTCTTTTTGTAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTAAGTATTTCTTGACATTAATATGAGGCATGATTTATTTTTCCTTTTGCTTTGTGTAATGTATGACATATAATGCTGGTGTTTCTTTGTTATTTATGATACCCCTTTATTGTCTAAAGTGTTATGGATGCCAATATGAATATAACTCAATGAGTTAAGACATTATACTCTCGATCAAGAGGTCAGAGGTTTGAATCCCCCCACCCTCATGTTTTTGTACTCTCTAAGGTGTTATAGATGAGGCTTATGATGTTCTTTACTTGTAAAGTGGATCAAGCTTGCACTCATATTTATATACTTTTTTCTTTTGTTATGGAAAAAAGATTATATATGAGTTTCTTACTCTGTTAATATGTTTTATTTTTATTATTAAGCACAGTATTCTTAGAGATGCAAACATGTGAAAACTAGTTGGAAGGCTTAAGAACATCGAATATTTTCTCTCTGAAGTTGAGATGGTCGTTTCTAGAATGAGTGAACTGTAGATACCTATAATTGTCAAATTAACTTTTGGTAATAGTTCTCCCTCTGTATGAGGGATTAGATATGTTTTCCGTCATTGGGTGCATTTCAGCATGTTCTGATGCTTTTGGGGAGTATTAGAGCCAGGAGGAGCTTATAATTTTAGATAATCAATGATTAATGTTTTTGGTGGCACAATGAGCTCATAAGCTGAGATTTACGGTTTATAATTTCGATATCCCACCTCGGTTGGGGAGGAGAACAAAAAATTCTTTATAAGGCTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGGAAAACCCGAAAAGGAAAGCTCAAAGAGGACAATATATGCTAGCGGTGGGCTAAGGCTGTTACAAATGGTATTAGAGCCAAACACCGAGTGATGTGTCAGCAAGGAGGTTGAGCCTCGAAGGGGGTGGACATGAGGTTGTGTGCCAGCAAGGTCGCTAGACCCGTAAGGGGGGTGGATTNGGGGGGGGGTGGATTGTGAGATCCCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAAACTGAGGGAAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTGGGCAGTTGACTCCTACTGACATGGTTTTTAAATTGATTTTCATCGTCTCCCTTTATTGGGCTGCTTCCATGTTTTTCAATATGTAAATGACTTTTGTGGAATATTCTCTATTGTAGTGTTCTCTCTGTACTTACCTACATTCTTTTCTGAAGTTATTCATTTAGTTTTAATCTTGTATTTTGTTTTGAACTAACTTATAAAGTTGAGTATCTTGCGACTTGGGTGGTATAGCCACCTCTGTGGCAGTAAGCGTGAATCAAAGATTTATGAGAGAAATGTTCTGACTCAAGCTACTAAAATCTAGAATCGATTAGGCTAAACGATATCCAACTTGGTTGAAATGGATAACCATTCGTCCACATCTTTGCAATGGTACTACCTTTTGAAACTGAGCATTCACTCACCTTGATCATAATGAGTTGATGATTGCATATTGAACGGGTCTTATTGACTAAAGCACTGAAAGTAAACATTTTTTTTTTTTTGCATATATTACTTTTTCATCAATATAAAATGAAGCTAGGATTTTTGCTATTCTTAAAAGATAAAGGTATAGAAAAGAACGTTGATGCTGGCCAAGACTAAGTACCAATGTATAACTAAACTAGGCTTAGATAGAATAGTGGTTTACAACTATGATGTTTGACGGAAATAAAAGAGAGATGAGTAGATCTATAGAAAATAGAAGATCAACTAAGTATTGCACTCTTGGAGATTGTGAACCATACAATGGAAAATTTTGTTGCACCACACTGATGTACGAAGAATATAAATAAATACAGATGGTTTAACAGTTAAATGATAACCTATGTAATTTCATTCTGATTAAGGGAGTAGCGCATGCTTGTTTTTGGATACTTTTGTTGTAATTACTATCAACTACCAAAAGGACTCTATATTCGAGATTCTTGATAAACCAATTATCCTGGTGCCTATTGTTGCTTTGTTCTTTTTTTTCTGAACATTCTTATTCCATGTAGCTATTCCAGTAATATACTGAAATTTAATTCCATTAGATATGTTCTCCGTCGACTGCATTACACCACTTATTGTTTGAATCTTAGATGCTTTAAATAAGTATAATTGATTTTCAGTGATGGCTTGAAAATAATGCCTTCTTAAAGAACAAAACTAGAGTTTTCAAATGTATGATATCCTATTGTTTGAGGATCCTGCAAATATGTTTTTAATAGATTCTCAGTGATAGATAGACGTCTACTGCTGGTATTTTTTAGAAATAAAACTAAAATTTTCTAGATGAAAGTTTCTATTCCACTAGTTGGACTGAGAATTTTCAAGCATTTCCCTGTTTTTGTGTGTATATGATGTATATTATCCGGTTACAATGTCCCAGGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAACTCTTAAGCGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGGTAAGTCTGCAATTTCATTGTTTCTTTCTTAACTATTTAGAAAGTGATATCCTTTCTGATTGGAGTTTCCTTGTTTTCTGTATAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAGAGTATTTATTTCACCATTTAGCTTGAAGTTGAATCCATCATCTGTTTCAAAATTCGTATATGATTACATGAGAAATTATCTACTCTTTTATTCATTGCAAAGTTCTTAAAAGATAATACTGTTGCACTGATTTTGACACTGTTATGTTGCCTTGGCGCCAGTATGTTGTTAATAACGCATGACTCCAGGATCTTGAACTTTGTTCTGTTAGCAAATCTTGCTTCTTTCTAGCTTTTGCTGGTCCTGTATGTGCGCTATAAATTAAGTTAGAATGTTCAATAGCTCTTCATACATTAAAGATTTAGCTTTCTGTAGTTTTATGGATGACTTCCATGCTTTTGACATCCTGGTACATGTGCACTCGCATACACACAATTCTCCGTTATGTATCGTGGATTCATTTCGGATTCATTTCGTCTTAACGATAAAGATAAAGCACGAACATGGACATTATTCATTCCGAATTTCACCTGTCATACTAGCATTCTTACATGTATTAAATTAACATGAATTGCAGGCTTACTTTGTCTGCTTTCAACTCTTTATCTGATGAAGACGATGTCCTACATTTATTTTGATCGCCACTCTTATCCGAAGTTTGTGTATTACGGGTTCTAAAGCGTGTCTAGTCAATATTTGTATGGGAGTTACACGAAGGAAACGAATTTGGACTTGGCAACTTCAAACACACTCAAACAGGTTTTTCCTCCCATTCCCATCCTTTGGCTTGGTAGGCTCCATTAGCAATGTCATTGGGTCAATACCTGTAGCAGAGGATAGAAGTTCATATGTTTTCCAATTAAAAATGATGTTATTGTAGAATGAATTTTAGCCTTGTAGGCAGTTATGATTGTCAATTTTAGCATTTTTCTTCCTTTTGCGATTACATGGATTATACTGATTTGCACGTATCTAGTAGCTTCAGGGATCTTCAGGATTAGGGTCTCATATTTGCACAGTTTTGGAATATCAACTAGTTTCAATTTGTAGTATTCTTGTAAGGATTGAAAGAAATTTTATCATTCTATGTCAACAAAACAAATATATTAAGTGTTGATGCCTACAAATGATAAGTTTCAA

mRNA sequence

TCTAACACTAACACGAACCATTGGATTAAAAGTTTGGGAACATGGTTAGAATTTGTTTAATATTGAGCGGCTAAATGGACATATTTCTAGAAGTATGCGACTAAATTTGTAAATTCAACTGTTCTTATAAACGGGAGCAAATTGTGATTGAAATTTTGATTCAACTTAGAAATTTGGTTGAGAGTTGAAGCAACATGGAATCACTGAAACTTCAATGCAGCATCTAAAGTTCATATTCCCAAGAACATTCAAGAATCTTCAATTCTTGAATTTCCTGAAGCTGAGCGGTTGCAGAAATGGCGTGGGATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAACTCTTAAGCGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAGAGCTTACTTTGTCTGCTTTCAACTCTTTATCTGATGAAGACGATGTCCTACATTTATTTTGATCGCCACTCTTATCCGAAGTTTGTGTATTACGGGTTCTAAAGCGTGTCTAGTCAATATTTGTATGGGAGTTACACGAAGGAAACGAATTTGGACTTGGCAACTTCAAACACACTCAAACAGGTTTTTCCTCCCATTCCCATCCTTTGGCTTGGTAGGCTCCATTAGCAATGTCATTGGGTCAATACCTGTAGCAGAGGATAGAAGTTCATATGTTTTCCAATTAAAAATGATGTTATTGTAGAATGAATTTTAGCCTTGTAGGCAGTTATGATTGTCAATTTTAGCATTTTTCTTCCTTTTGCGATTACATGGATTATACTGATTTGCACGTATCTAGTAGCTTCAGGGATCTTCAGGATTAGGGTCTCATATTTGCACAGTTTTGGAATATCAACTAGTTTCAATTTGTAGTATTCTTGTAAGGATTGAAAGAAATTTTATCATTCTATGTCAACAAAACAAATATATTAAGTGTTGATGCCTACAAATGATAAGTTTCAA

Coding sequence (CDS)

ATGCAGCATCTAAAGTTCATATTCCCAAGAACATTCAAGAATCTTCAATTCTTGAATTTCCTGAAGCTGAGCGGTTGCAGAAATGGCGTGGGATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCGTAGTACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAACTCTTAAGCGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAG

Protein sequence

MQHLKFIFPRTFKNLQFLNFLKLSGCRNGVGSDLLVHLFLYQRRPPRPQLLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF

Homology

[Close]

BLAST of Cp4.1LG10g11810.1 vs. Swiss-Prot
Match: CNIH1_ARATH (Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-25
Identity = 61/116 (52.59%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADYLN +++S+RIN+LVIPEF++QG  C LFL T HW  FL+ VPV+ YH  L+ 
Sbjct: 29  LTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAMLYK 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDD 167
           ++ +LIDVTEVFR +  EK  R  KL FY+ LF++V+FR+ + A    V+    DD
Sbjct: 89  ERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSA----VYSFTEDD 140

[Close]

BLAST of Cp4.1LG10g11810.1 vs. Swiss-Prot
Match: CNIH2_ARATH (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 7.7e-22
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P   Y+ +L+ 
Sbjct: 20  LADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYS 79

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 155
           K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 80  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of Cp4.1LG10g11810.1 vs. Swiss-Prot
Match: CNIH4_ARATH (Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.7e-22
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P   Y+ +L+ 
Sbjct: 28  LADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYS 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 155
           K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 88  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 131

[Close]

BLAST of Cp4.1LG10g11810.1 vs. Swiss-Prot
Match: CNIH3_ARATH (Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-20
Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L TGHWFM L+ VP   Y+ +L+ 
Sbjct: 28  LADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYS 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRII 152
           +K+HLIDVTE+F  L  EK  RL KL + +L   + IF +I
Sbjct: 88  RKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLI 128

[Close]

BLAST of Cp4.1LG10g11810.1 vs. Swiss-Prot
Match: ERV14_YEAST (ER-derived vesicles protein ERV14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERV14 PE=1 SV=3)

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-17
Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           L  DLEADY+N  +  S++NKL+ PE  + G    LFL  G+WF+FL+ +PV  Y++N  
Sbjct: 26  LYADLEADYINPIELCSKVNKLITPEAALHGALSLLFLLNGYWFVFLLNLPVLAYNLNKI 85

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIM 153
             K  L+D TE+FRTL + K     KL F+LL+F   ++R+IM
Sbjct: 86  YNKVQLLDATEIFRTLGKHKRESFLKLGFHLLMFFFYLYRMIM 128

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TrEMBL
Match: A5C5A1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035789 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.0e-34
Identity = 77/133 (57.89%), Postives = 103/133 (77.44%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADY+N Y+SSSRIN +V+P+F++QGV C LFL T HWF+FLI+VP++CY+  LF+
Sbjct: 29  LSDLEADYMNPYESSSRINSIVVPDFILQGVLCILFLLTWHWFLFLISVPITCYNAMLFM 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRI-------IMVAGMKSVFDSA 170
           K++HLIDVTEVFRTL  EK +R+AKL FYL LF++VI R        I+ AG  S++ S 
Sbjct: 89  KRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFLFIIVIIRFSLLFGYRILAAGSLSLYQS- 148

Query: 171 PDDIDIRSTVLEF 177
            +++DIRS+ LEF
Sbjct: 149 EEELDIRSSFLEF 160

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TrEMBL
Match: A0A0B2SN34_GLYSO (Protein cornichon like 1 OS=Glycine soja GN=glysoja_042255 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-32
Identity = 72/127 (56.69%), Postives = 97/127 (76.38%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLE+DY+N +D++SRIN  V+PEFV QG  C+L LFTGHWFMFL+TVPV+CYH+ L+
Sbjct: 29  ILSDLESDYINPFDAASRINYFVLPEFVGQGALCALCLFTGHWFMFLLTVPVTCYHLRLY 88

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           +K+EHLIDVTEVFR L  EK +R+AKL  YL + +V IFR I+ AG   ++ S  +++DI
Sbjct: 89  VKREHLIDVTEVFRVLNAEKKYRIAKLALYLTVLIVTIFR-ILAAGRVILYSSKFEELDI 148

Query: 170 RSTVLEF 177
           R   + F
Sbjct: 149 RLNPIGF 154

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TrEMBL
Match: K7LIA5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G093400 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-32
Identity = 72/127 (56.69%), Postives = 97/127 (76.38%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLE+DY+N +D++SRIN  V+PEFV QG  C+L LFTGHWFMFL+TVPV+CYH+ L+
Sbjct: 29  ILSDLESDYINPFDAASRINYFVLPEFVGQGALCALCLFTGHWFMFLLTVPVTCYHLRLY 88

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           +K+EHLIDVTEVFR L  EK +R+AKL  YL + +V IFR I+ AG   ++ S  +++DI
Sbjct: 89  VKREHLIDVTEVFRVLNAEKKYRIAKLALYLTVLIVTIFR-ILAAGRVILYSSKFEELDI 148

Query: 170 RSTVLEF 177
           R   + F
Sbjct: 149 RLNPIGF 154

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TrEMBL
Match: A0A0J8CTK3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060880 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.3e-31
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADY+N Y+SS+ IN +++PEF +Q  FC+LFL TGHW MFL+T+PV+ YH  LF 
Sbjct: 4   LSDLEADYMNPYESSTNINSMILPEFGLQAAFCALFLLTGHWLMFLVTLPVAIYHARLFT 63

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRI-IMVAGMKSVFDSAPDDIDI 170
           + EHL+DVTE+FR L  EK +R  KL+ YLL F +VIFR         S+F S P D+DI
Sbjct: 64  RGEHLVDVTEIFRALSLEKKYRFVKLVLYLLFFFLVIFRFPTGSVSSLSIFSSTPGDLDI 123

Query: 171 RSTVLEF 177
           RS+ LEF
Sbjct: 124 RSSFLEF 130

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TrEMBL
Match: A0A0S3SU99_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G335300 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.3e-31
Identity = 70/124 (56.45%), Postives = 94/124 (75.81%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLE+DY+N +D+SSRIN  V+PEF+ QG  C+L LFTGHWFMFL+TVPV+CYH  L+
Sbjct: 29  ILSDLESDYVNPFDASSRINYFVLPEFIGQGALCALCLFTGHWFMFLLTVPVTCYHARLY 88

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           +K+EHLIDVTEVFR +  EK FR+ KL  YL + +V IFR ++ AG    ++S   ++DI
Sbjct: 89  VKREHLIDVTEVFRVVNAEKKFRIVKLALYLTVLIVTIFR-MLAAGTIIFYNSKFQELDI 148

Query: 170 RSTV 174
           RS +
Sbjct: 149 RSNL 151

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TAIR10
Match: AT3G12180.1 (AT3G12180.1 Cornichon family protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 61/116 (52.59%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADYLN +++S+RIN+LVIPEF++QG  C LFL T HW  FL+ VPV+ YH  L+ 
Sbjct: 29  LTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAMLYK 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDD 167
           ++ +LIDVTEVFR +  EK  R  KL FY+ LF++V+FR+ + A    V+    DD
Sbjct: 89  ERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSA----VYSFTEDD 140

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TAIR10
Match: AT1G12340.1 (AT1G12340.1 Cornichon family protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.4e-23
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P   Y+ +L+ 
Sbjct: 20  LADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYS 79

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 155
           K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 80  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TAIR10
Match: AT1G12390.1 (AT1G12390.1 Cornichon family protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.4e-23
Identity = 54/104 (51.92%), Postives = 73/104 (70.19%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +L TGHWFM L+ +P   Y+ +L+ 
Sbjct: 28  LADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFHLYS 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 155
           K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 88  KRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 131

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TAIR10
Match: AT1G62880.1 (AT1G62880.1 Cornichon family protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 52/101 (51.49%), Postives = 70/101 (69.31%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L TGHWFM L+ VP   Y+ +L+ 
Sbjct: 28  LADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFHLYS 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRII 152
           +K+HLIDVTE+F  L  EK  RL KL + +L   + IF +I
Sbjct: 88  RKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFWLI 128

[Close]

BLAST of Cp4.1LG10g11810.1 vs. TAIR10
Match: AT4G12090.1 (AT4G12090.1 Cornichon family protein)

HSP 1 Score: 88.6 bits (218), Expect = 4.2e-18
Identity = 45/101 (44.55%), Postives = 69/101 (68.32%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLE D +N YD SSRIN++V+PEF +QG+ C  ++ TGHWFM ++++P   Y+I L++
Sbjct: 28  LADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIRLYM 87

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRII 152
           K+EHL DVTE++ T K E+  R+ K+    L   +  + +I
Sbjct: 88  KREHLADVTELYNTNKWEQKKRVYKIGHIALSIFITTYWLI 128

[Close]

BLAST of Cp4.1LG10g11810.1 vs. NCBI nr
Match: gi|659083289|ref|XP_008442268.1| (PREDICTED: protein cornichon homolog 1 isoform X1 [Cucumis melo])

HSP 1 Score: 228.4 bits (581), Expect = 9.7e-57
Identity = 115/127 (90.55%), Postives = 124/127 (97.64%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLEADYLNIYDSSSRINKLV+PEF+VQGVFCSLFLFTGHWFMFLITVPV+CYHINLF
Sbjct: 28  VLTDLEADYLNIYDSSSRINKLVLPEFLVQGVFCSLFLFTGHWFMFLITVPVTCYHINLF 87

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           LK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFRIIMVA MKSVFDSAP+DIDI
Sbjct: 88  LKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAEMKSVFDSAPEDIDI 147

Query: 170 RSTVLEF 177
           RS+VLE+
Sbjct: 148 RSSVLEY 154

[Close]

BLAST of Cp4.1LG10g11810.1 vs. NCBI nr
Match: gi|449453826|ref|XP_004144657.1| (PREDICTED: protein cornichon homolog 1 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.7e-45
Identity = 99/120 (82.50%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLEADYLNIYDSSSRINKLVIPEF+VQGVFCSLFLFTGHWFMFLITVPV+CYHINLF
Sbjct: 28  VLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFLFTGHWFMFLITVPVTCYHINLF 87

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           LK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFLVVIFR+ +     S F+S  D+ D+
Sbjct: 88  LKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLVVIFRLTL-----SAFNSLSDEDDV 142

[Close]

BLAST of Cp4.1LG10g11810.1 vs. NCBI nr
Match: gi|659083291|ref|XP_008442270.1| (PREDICTED: protein cornichon homolog 1 isoform X2 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.4e-44
Identity = 96/120 (80.00%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 50  LLPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLF 109
           +L DLEADYLNIYDSSSRINKLV+PEF+VQGVFCSLFLFTGHWFMFLITVPV+CYHINLF
Sbjct: 28  VLTDLEADYLNIYDSSSRINKLVLPEFLVQGVFCSLFLFTGHWFMFLITVPVTCYHINLF 87

Query: 110 LKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDI 169
           LK+EHLIDVTEVFR LKREKYFRLAKLIFYLLLFL+VIFR+ +     S F+S  D+ ++
Sbjct: 88  LKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRLTL-----SAFNSLSDEDNV 142

[Close]

BLAST of Cp4.1LG10g11810.1 vs. NCBI nr
Match: gi|731400005|ref|XP_010653820.1| (PREDICTED: protein cornichon homolog 1 isoform X1 [Vitis vinifera])

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-34
Identity = 77/126 (61.11%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADY+N Y+SSSRIN +V+P+F++QGV C LFL T HWF+FLI+VP++CY+  LF+
Sbjct: 29  LSDLEADYMNPYESSSRINSIVVPDFILQGVLCILFLLTWHWFLFLISVPITCYNAMLFM 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDIR 170
           K++HLIDVTEVFRTL  EK +R+AKL FYL LF++VI R I+ AG  S++ S  +++DIR
Sbjct: 89  KRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFLFIIVIIR-ILAAGSLSLYQS-EEELDIR 148

Query: 171 STVLEF 177
           S+ LEF
Sbjct: 149 SSFLEF 152

[Close]

BLAST of Cp4.1LG10g11810.1 vs. NCBI nr
Match: gi|147841607|emb|CAN64231.1| (hypothetical protein VITISV_035789 [Vitis vinifera])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 77/133 (57.89%), Postives = 103/133 (77.44%), Query Frame = 1


Query: 51  LPDLEADYLNIYDSSSRINKLVIPEFVVQGVFCSLFLFTGHWFMFLITVPVSCYHINLFL 110
           L DLEADY+N Y+SSSRIN +V+P+F++QGV C LFL T HWF+FLI+VP++CY+  LF+
Sbjct: 29  LSDLEADYMNPYESSSRINSIVVPDFILQGVLCILFLLTWHWFLFLISVPITCYNAMLFM 88

Query: 111 KKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRI-------IMVAGMKSVFDSA 170
           K++HLIDVTEVFRTL  EK +R+AKL FYL LF++VI R        I+ AG  S++ S 
Sbjct: 89  KRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFLFIIVIIRFSLLFGYRILAAGSLSLYQS- 148

Query: 171 PDDIDIRSTVLEF 177
            +++DIRS+ LEF
Sbjct: 149 EEELDIRSSFLEF 160

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g11810.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNIH1_ARATH	2.6e-25	52.59	Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1	[more]
CNIH2_ARATH	7.7e-22	51.92	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 S...	[more]
CNIH4_ARATH	7.7e-22	51.92	Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1	[more]
CNIH3_ARATH	1.9e-20	51.49	Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1	[more]
ERV14_YEAST	2.0e-17	44.66	ER-derived vesicles protein ERV14 OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]

BLAST of Cp4.1LG10g11810.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A5C5A1_VITVI	8.0e-34	57.89	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035789 PE=4 SV=1	[more]
A0A0B2SN34_GLYSO	4.4e-32	56.69	Protein cornichon like 1 OS=Glycine soja GN=glysoja_042255 PE=4 SV=1	[more]
K7LIA5_SOYBN	4.4e-32	56.69	Uncharacterized protein OS=Glycine max GN=GLYMA_10G093400 PE=4 SV=1	[more]
A0A0J8CTK3_BETVU	1.3e-31	55.91	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060880 PE=4 S...	[more]
A0A0S3SU99_PHAAN	8.3e-31	56.45	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G335300 PE=...	[more]

BLAST of Cp4.1LG10g11810.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12180.1	1.4e-26	52.59	Cornichon family protein	[more]
AT1G12340.1	4.4e-23	51.92	Cornichon family protein	[more]
AT1G12390.1	4.4e-23	51.92	Cornichon family protein	[more]
AT1G62880.1	1.1e-21	51.49	Cornichon family protein	[more]
AT4G12090.1	4.2e-18	44.55	Cornichon family protein	[more]

BLAST of Cp4.1LG10g11810.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659083289\|ref\|XP_008442268.1\|	9.7e-57	90.55	PREDICTED: protein cornichon homolog 1 isoform X1 [Cucumis melo]	[more]
gi\|449453826\|ref\|XP_004144657.1\|	1.7e-45	82.50	PREDICTED: protein cornichon homolog 1 [Cucumis sativus]	[more]
gi\|659083291\|ref\|XP_008442270.1\|	1.4e-44	80.00	PREDICTED: protein cornichon homolog 1 isoform X2 [Cucumis melo]	[more]
gi\|731400005\|ref\|XP_010653820.1\|	1.8e-34	61.11	PREDICTED: protein cornichon homolog 1 isoform X1 [Vitis vinifera]	[more]
gi\|147841607\|emb\|CAN64231.1\|	1.2e-33	57.89	hypothetical protein VITISV_035789 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR003377	Cornichon

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0035556	intracellular signal transduction
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG10g11810	Cp4.1LG10g11810	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG10g11810.1	Cp4.1LG10g11810.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG10g11810.1:five_prime_utr:001	Cp4.1LG10g11810.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG10g11810.1:cds:004	Cp4.1LG10g11810.1:cds:004	CDS
Cp4.1LG10g11810.1:cds:003	Cp4.1LG10g11810.1:cds:003	CDS
Cp4.1LG10g11810.1:cds:002	Cp4.1LG10g11810.1:cds:002	CDS
Cp4.1LG10g11810.1:cds:001	Cp4.1LG10g11810.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG10g11810.1:three_prime_utr:002	Cp4.1LG10g11810.1:three_prime_utr:002	three_prime_UTR
Cp4.1LG10g11810.1:three_prime_utr:001	Cp4.1LG10g11810.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 51..148 score: 3.7
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 38..148 score: 4.1
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 50..154 score: 9.1