CmoCh07G013500 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G013500
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein cornichon like 1
Location	Cmo_Chr07 : 7641190 .. 7644568 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATGAAACTTGGAAATGTGGTTGAAACTGGAAGCAATCATGATGGAACTACTGAAGCTTCATCGCAGTATGTAGCTTTAGACTCTAGAGTTCAAATTCTCAAGAACACTGAACTTGCGAGATCGCCTTACCATCAACAATCAAGCTTTGAGTTCTGGAATTTCTGAACTGACGCTGCGCGGTTGTAGAAATGGCGTGGAGTCTGATCTTTTGGTTCGTCTCTTTCTGTATCAACATCGCACTTCTCGTCCTCAACTTTTACCAGGTACACCCTTTCTAATCTCTCATAAACCCTAGTTTTCACGATCAAGTTACAGATTCTTTTGCGAGAAAGTTTGAATGCGTCTGCTGAAACGTAGCCCTAATGTTGTTGTTGTGTTTGTTTTGTTGTAATCTTGTTGTTGCTTATTCAGTAAGCAGTGGAGGTTTGATGCATATCTTAGATTCGGATTCGGTTTTCTTGAAGAGAGCATTTCGACTTCAATTTTATTTACGTTTATATGTGACCTAGATTTTGATTGATGGAACCTTTACACTTTCGTTGCGCCTACTTTTGAAATAGATTCAATACCTACTTACTGTTCCACCGCTCTCTTAGTTTCATAATTTTACGGTGATGAGTTTGATATCTTGATCAATCGTGCACTGTTAGCCGAAGTGAACGTATTCACAAAATGACATATCTACCTGTGAAATAACCGGCCACTTCCATGGAATGGATTGATCATTTCCTTTTGCATCTGAGTCAACGATGTACTCTTACCTTGTTTTGTAGTCTCCAGAGAAGTGGCTGTATATGTAACTTGTTGGGATAAAAGATTGTAAATGTATTTCAACCATGAAACGGGCTTCAATTATTATAGTTGATTATACTCTAATAACTGGTTCTTGATGCGGATGGAAGTAAAAGTGATCCCAATTCCTGCGGGTTATGTCTGGGACATCAATAGATTGTTGGCTTTACTCCCATTTCGTTTAATATGATGTACAGTGGCAGGAGGAGAGAAGTAATTGCTCTTATTTTCTTTTGAACCATGACGATTTGTCCTCTCTATTGCTTGTATTCTTATAGACTTGATGAATGTTAAGATTTTACACTTGTAGATGAACATCACTAGCCATTGCAAAGAGTAATATTTATTGTCTAGTTACATCTGTGCTTTTAAGTTGGAAGCATCTAATGGTTGTGGTTGACCTTTTTTTGTAGCTCTTGGTATTAACGGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAACAAACTTGTCGTTCCAGAGTTTTTGGTGCAAGGACTGTTTTGCTCTCTTTTCCTCTTCACAGGCCACTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGTTATCACATAAATTTGTAAGTGTTTCTTGACTCTGAAATAAGGCCTGGTATATATTTTCTTTTACTGTGTGCTATGGATGAGACCTATTGGTGGCGTTCTTTGTTGATTTTCCCCTTCTACTGTCTGGAAGTGTTATGTATGAGGCTTATGATGTCCCTTACTTGTAAAATGAATCTAGCTTGCACTCATATTATATATACTTTATTCTTTTGTTATGGAAAAAAGCATTATGCATTCTTTTTACTTTCTTAATACGCTTTGTTCTATTATCAAACACCATTCTTTTAGATGAATGTATATAGTGAAAACTTCTTGGTACGGTTAGAAACATCGAATATTCTCACTCTGAATGTATATAGTAAAAACTTCTTGGACGATGTTAATGGTAAACCGATTAACCTGGTGCCAATTATTGCTTTCGTCATTTTTTCTGAACATTCTTATTCCATGTAGCTATCCCAGTACAAGACTCAAATTTAATTCCATTACACAGGTCCTCCATCTGCGGAAGTATGCCAACTTATTGTTTGAAACTTTTATCCCACATAAGTCTTTAATAAATTTTTGGTGATCGATGACCATCTACTACTGGTCATTTTTTAGAGTAAAACTAAAACTTAGTAATGTAGGATGGTTAACAGGATAAAGAAAAAACAAGGAAAAAAGAAAATGAATTATGTTCCACTACTTGGACTGAGTTTCTTTCTAGTATTTCTCCATGTTTTGTGTTTATGATGAATTATCCTGTTACAATGCCCCAGGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTTAAAACTCTAAAACGTGAGAAGTATTTTCGTTTTGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCGTAGTAATCTTCAGGTTAGTCTGAATTTTTGCTTGCGTCATTCTGCTTTTCTTCTTAACTATTTTGAAGGTTGGATATTTCTGATTGAGGTTTTCCTTGCTGTTTTCTGTATAGAATAATAATGGTAGCGGGAATGAAATCTGTTTTTGACTCTGCACCTGAGGATATAGACATTCGCTCCACTGTTCTCGAATTCTAGAGTATTTATTTAACCAACTAGCTTAAAGTCGAATCCATCCTTTGTTTTGAAATACGTATACGATTACATGGAAAATAGTCAACTTATTTATTGATTGCAAAGTTCTTAAAGATAATGATGTTACACTGACTTGGGATTGTTTTGTTGGTTTTGGAAGCTATATACCATTACTCTCTGTTCTCTTGACGCCTTTTAGTACCTTGTTAGTAATGCATTATTGCAAGTTTTTGGATTTTGCTCTGTTTGATCCAAATGTTGTCTCTTTCTAACCTTTTCTAGTCCCAATATTTTCTATAAATTAACTTAGAATGTCCAATACATATTTTATGTTAAAAAATGTAGCTTTGTTTAGTTTTATGGTCGACTCCTATGCTTCTTGAGTGAGATCCTGGTACATGTGCACTTGCATACACATATTTTCGCCTCTCTTACTGGCATTCTTACATGTATTGAATTAACATGCAATGCAGGCTTACCTTGTCTGCTTTCAACGCATTATCTGATGAAGACGACGTCCTACATTTATTTTGATTACGATTCTCTTACTCGAAGTTTGTATTACGGGTTCTATAGCATGTCTGTGGTTGGTATTTGTTTGGGAAGTTACACGCAAGGAAACAAATTTGAACAAAGCAACTTCGAACATACAGGTTTTTCCTCCCATATTCCCATTCTTTGCTTTGGTTGGCTCCTCTAGCATTCTCGTAGACTTTGACCCAAGGAATGCTTGTATGTAGAGAGGATTGAAGTTCATAGATTCTCCAGTTTAAAATGATATGATTGTAGAATGAGTTTTAGCATTGTAAGCATATTGTTCAATTAGTTGACATGTGATTTGTTTGGTTACTTGACAACTTACTGGTAATTTTCAGGGTTCTCCAAGTTTAGAGTCCCATTTCTTTGCATGTTTTTGAAATATCAGATTGAGTTAGCCA

mRNA sequence

TGATGAAACTTGGAAATGTGGTTGAAACTGGAAGCAATCATGATGGAACTACTGAAGCTTCATCGCAGTATGTAGCTTTAGACTCTAGAGTTCAAATTCTCAAGAACACTGAACTTGCGAGATCGCCTTACCATCAACAATCAAGCTTTGAGTTCTGGAATTTCTGAACTGACGCTGCGCGGTTGTAGAAATGGCGTGGAGTCTGATCTTTTGGTTCGTCTCTTTCTGTATCAACATCGCACTTCTCGTCCTCAACTTTTACCAGCTCTTGGTATTAACGGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAACAAACTTGTCGTTCCAGAGTTTTTGGTGCAAGGACTGTTTTGCTCTCTTTTCCTCTTCACAGGCCACTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGTTATCACATAAATTTGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTTAAAACTCTAAAACGTGAGAAGTATTTTCGTTTTGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCGTAGTAATCTTCAGGCTTACCTTGTCTGCTTTCAACGCATTATCTGATGAAGACGACGTCCTACATTTATTTTGATTACGATTCTCTTACTCGAAGTTTGTATTACGGGTTCTATAGCATGTCTGTGGTTGGTATTTGTTTGGGAAGTTACACGCAAGGAAACAAATTTGAACAAAGCAACTTCGAACATACAGGTTTTTCCTCCCATATTCCCATTCTTTGCTTTGGTTGGCTCCTCTAGCATTCTCGTAGACTTTGACCCAAGGAATGCTTGTATGTAGAGAGGATTGAAGTTCATAGATTCTCCAGTTTAAAATGATATGATTGTAGAATGAGTTTTAGCATTGTAAGCATATTGTTCAATTAGTTGACATGTGATTTGTTTGGTTACTTGACAACTTACTGGTAATTTTCAGGGTTCTCCAAGTTTAGAGTCCCATTTCTTTGCATGTTTTTGAAATATCAGATTGAGTTAGCCA

Coding sequence (CDS)

ATGGCGTGGAGTCTGATCTTTTGGTTCGTCTCTTTCTGTATCAACATCGCACTTCTCGTCCTCAACTTTTACCAGCTCTTGGTATTAACGGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAACAAACTTGTCGTTCCAGAGTTTTTGGTGCAAGGACTGTTTTGCTCTCTTTTCCTCTTCACAGGCCACTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGTTATCACATAAATTTGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTTAAAACTCTAAAACGTGAGAAGTATTTTCGTTTTGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCGTAGTAATCTTCAGGCTTACCTTGTCTGCTTTCAACGCATTATCTGATGAAGACGACGTCCTACATTTATTTTGA

Homology

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BLAST of CmoCh07G013500 vs. Swiss-Prot
Match: CNIH1_ARATH (Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-39
Identity = 81/146 (55.48%), Postives = 112/146 (76.71%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           MAW L  W VSF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LV+PEF++QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           C LFL T HW  FL+ VPV+ YH  L+ +R +LIDVTEVF+ +  EK  R+ KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           F++V+FRLTLSA  + +++DD+LHLF
Sbjct: 121 FIMVVFRLTLSAVYSFTEDDDLLHLF 146

[Close]

BLAST of CmoCh07G013500 vs. Swiss-Prot
Match: CNIH4_ARATH (Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 7.3e-26
Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 1


Query: 8   WFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLFCSLFLFT 67
           W +SF   IAL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF+VQG+ C  +L T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFR 127
           GHWFM L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  R  KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 LTLSAFNALSD 139
           +  SA +   D
Sbjct: 127 MIYSALDDYED 137

[Close]

BLAST of CmoCh07G013500 vs. Swiss-Prot
Match: CNIH3_ARATH (Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-24
Identity = 63/131 (48.09%), Postives = 84/131 (64.12%), Query Frame = 1


Query: 8   WFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLFCSLFLFT 67
           W +SF I I LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFR 127
           GHWFM L+ VP   Y+ +L+ +++HLIDVTE+F  L  EK  R  KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 LTLSAFNALSD 139
           L  S  +   D
Sbjct: 127 LIYSTLDDYED 137

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BLAST of CmoCh07G013500 vs. Swiss-Prot
Match: CNIH2_ARATH (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.7e-22
Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1


Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLFCSLFLFTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF+VQG+ C  +L TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSD 138
              Y+ +L+ KR+HL+DVTE+F  L  EK  R  KL + +L   + IF +  SA +   D
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYED 129

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BLAST of CmoCh07G013500 vs. Swiss-Prot
Match: CNIH5_ARATH (Protein cornichon homolog 5 OS=Arabidopsis thaliana GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-20
Identity = 57/128 (44.53%), Postives = 82/128 (64.06%), Query Frame = 1


Query: 5   LIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLFCSLF 64
           L+ W +SF     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QGL C  +
Sbjct: 4   LLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYY 63

Query: 65  LFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVV 124
           + TGHWFM ++++P   Y+I L++KREHL DVTE++ T K E+  R  K+    L   + 
Sbjct: 64  ILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFIT 123

Query: 125 IFRLTLSA 133
            + L  SA
Sbjct: 124 TYWLIHSA 131

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BLAST of CmoCh07G013500 vs. TrEMBL
Match: A0A0D2RVQ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G140000 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 9.6e-41
Identity = 90/146 (61.64%), Postives = 114/146 (78.08%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           MAW LIFW V F INIALL  +F+QLL L+DLEAD+LN +++S+RIN +V+PEFL+QG  
Sbjct: 1   MAWDLIFWVVCFFINIALLASSFFQLLSLSDLEADHLNPFEASTRINSIVLPEFLLQGFL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           C  FL T HWFMFL T+P++ YH+ L+L R+HL+DVTE+F+ L  EK +RF KL  YLLL
Sbjct: 61  CISFLLTWHWFMFLFTLPIAAYHLMLYLNRKHLLDVTEIFRDLNTEKKYRFIKLAVYLLL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           F VV+FRL +SAFN+L DE DV H F
Sbjct: 121 FTVVLFRLVISAFNSLHDEVDV-HAF 145

[Close]

BLAST of CmoCh07G013500 vs. TrEMBL
Match: A0A087H8Y0_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G132300 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.2e-40
Identity = 85/146 (58.22%), Postives = 113/146 (77.40%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           M W L  W VSF I++AL+   FYQ++ LTDLEADYLN +++SSRIN+LV+PEF++QG  
Sbjct: 282 MGWDLFLWIVSFFISLALVASVFYQVICLTDLEADYLNPFETSSRINRLVLPEFILQGSL 341

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           C LFL T HW  FL+ +PV+CYH  L+ +R HLIDVTEVF+ +  EK FRF KL FY+ L
Sbjct: 342 CILFLLTWHWVFFLVALPVTCYHAMLYNERRHLIDVTEVFRGISFEKKFRFTKLGFYIFL 401

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           F++V+FRLTLSA  + +++DD+LHLF
Sbjct: 402 FIMVVFRLTLSAVYSFTEDDDLLHLF 427

[Close]

BLAST of CmoCh07G013500 vs. TrEMBL
Match: A0A061EYA2_THECC (Cornichon family protein isoform 1 OS=Theobroma cacao GN=TCM_024831 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.1e-40
Identity = 88/146 (60.27%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           MAW LIFW + F INIAL    FYQLL L+DLE D+LN +++SSRIN +VVPEFL+QGL 
Sbjct: 1   MAWDLIFWILCFFINIALFASTFYQLLSLSDLEVDHLNPFEASSRINAVVVPEFLLQGLL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           C+LFL T HWFMFL+ +P++ YH+ L+L R+HLIDVTEVF+ +  EK +R+ KL  YL+L
Sbjct: 61  CALFLLTWHWFMFLLFLPLTAYHLMLYLNRKHLIDVTEVFRDIGTEKKYRYVKLGIYLVL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           F V++FRL +SAF++L DED+V H F
Sbjct: 121 FTVILFRLIISAFSSLLDEDEV-HAF 145

[Close]

BLAST of CmoCh07G013500 vs. TrEMBL
Match: V4LEA5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021709mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-39
Identity = 84/146 (57.53%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           MAW L+ W +SF I++AL+   FYQ++ LTDLEADYLN +++SSRIN+LV+PEF++QG  
Sbjct: 1   MAWDLLLWILSFFISLALVASVFYQVICLTDLEADYLNPFETSSRINRLVLPEFILQGFL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           C LFL T HWF FL+++PV+ YH  L+ +R HLIDVTEVF+ +  EK  RF KL FY+ L
Sbjct: 61  CILFLLTWHWFFFLVSLPVTLYHAMLYNERRHLIDVTEVFRGINFEKKLRFTKLGFYIFL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           F++V+FRLTLSA  + +++DD+LHLF
Sbjct: 121 FIMVVFRLTLSAVYSFTEDDDLLHLF 146

[Close]

BLAST of CmoCh07G013500 vs. TrEMBL
Match: V7BKT5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G256900g PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-39
Identity = 88/149 (59.06%), Postives = 114/149 (76.51%), Query Frame = 1


Query: 1   MAWSLIFWF-VSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGL 60
           M W+LIFW  + F  NIALL   FYQ+L+L+DLE+DY+N +D+SSRIN  V+PEF+ QG 
Sbjct: 1   MGWNLIFWLLICFPANIALLASTFYQVLILSDLESDYINPFDASSRINYFVLPEFIGQGA 60

Query: 61  FCSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLL 120
            C+L LFTGHWFMFL+TVPV+CYH+ L++KREHLIDVTEVF+    EK FR AKL  YL 
Sbjct: 61  LCALCLFTGHWFMFLLTVPVTCYHVRLYVKREHLIDVTEVFRVANAEKKFRIAKLALYLT 120

Query: 121 LFLVVIFRLTLSA--FNALSDEDDVLHLF 147
           + +V IFRLTL A  +  + D+DD+ +L+
Sbjct: 121 VLIVTIFRLTLIAVYYLGIEDDDDLRYLW 149

[Close]

BLAST of CmoCh07G013500 vs. TAIR10
Match: AT3G12180.1 (AT3G12180.1 Cornichon family protein)

HSP 1 Score: 164.1 bits (414), Expect = 6.6e-41
Identity = 81/146 (55.48%), Postives = 112/146 (76.71%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           MAW L  W VSF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LV+PEF++QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           C LFL T HW  FL+ VPV+ YH  L+ +R +LIDVTEVF+ +  EK  R+ KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           F++V+FRLTLSA  + +++DD+LHLF
Sbjct: 121 FIMVVFRLTLSAVYSFTEDDDLLHLF 146

[Close]

BLAST of CmoCh07G013500 vs. TAIR10
Match: AT1G12390.1 (AT1G12390.1 Cornichon family protein)

HSP 1 Score: 118.2 bits (295), Expect = 4.1e-27
Identity = 63/131 (48.09%), Postives = 87/131 (66.41%), Query Frame = 1


Query: 8   WFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLFCSLFLFT 67
           W +SF   IAL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF+VQG+ C  +L T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFR 127
           GHWFM L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  R  KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 LTLSAFNALSD 139
           +  SA +   D
Sbjct: 127 MIYSALDDYED 137

[Close]

BLAST of CmoCh07G013500 vs. TAIR10
Match: AT1G62880.1 (AT1G62880.1 Cornichon family protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.0e-25
Identity = 63/131 (48.09%), Postives = 84/131 (64.12%), Query Frame = 1


Query: 8   WFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLFCSLFLFT 67
           W +SF I I LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFR 127
           GHWFM L+ VP   Y+ +L+ +++HLIDVTE+F  L  EK  R  KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 LTLSAFNALSD 139
           L  S  +   D
Sbjct: 127 LIYSTLDDYED 137

[Close]

BLAST of CmoCh07G013500 vs. TAIR10
Match: AT1G12340.1 (AT1G12340.1 Cornichon family protein)

HSP 1 Score: 107.1 bits (266), Expect = 9.5e-24
Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1


Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLFCSLFLFTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF+VQG+ C  +L TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVVIFRLTLSAFNALSD 138
              Y+ +L+ KR+HL+DVTE+F  L  EK  R  KL + +L   + IF +  SA +   D
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYED 129

[Close]

BLAST of CmoCh07G013500 vs. TAIR10
Match: AT4G12090.1 (AT4G12090.1 Cornichon family protein)

HSP 1 Score: 100.9 bits (250), Expect = 6.8e-22
Identity = 57/128 (44.53%), Postives = 82/128 (64.06%), Query Frame = 1


Query: 5   LIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLFCSLF 64
           L+ W +SF     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QGL C  +
Sbjct: 4   LLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYY 63

Query: 65  LFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLLFLVV 124
           + TGHWFM ++++P   Y+I L++KREHL DVTE++ T K E+  R  K+    L   + 
Sbjct: 64  ILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFIT 123

Query: 125 IFRLTLSA 133
            + L  SA
Sbjct: 124 TYWLIHSA 131

[Close]

BLAST of CmoCh07G013500 vs. NCBI nr
Match: gi|449453826|ref|XP_004144657.1| (PREDICTED: protein cornichon homolog 1 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 5.4e-69
Identity = 136/146 (93.15%), Postives = 143/146 (97.95%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           MAW+LIFWF+SFC NIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+F
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPV+CYHINLFLKREHLIDVTEVF+ LKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           FLVVIFRLTLSAFN+LSDEDDVLHLF
Sbjct: 121 FLVVIFRLTLSAFNSLSDEDDVLHLF 146

[Close]

BLAST of CmoCh07G013500 vs. NCBI nr
Match: gi|659083291|ref|XP_008442270.1| (PREDICTED: protein cornichon homolog 1 isoform X2 [Cucumis melo])

HSP 1 Score: 265.8 bits (678), Expect = 4.5e-68
Identity = 134/146 (91.78%), Postives = 143/146 (97.95%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           MAW+LIFWF+SFC NIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+F
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVLPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPV+CYHINLFLKREHLIDVTEVF+ LKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           FL+VIFRLTLSAFN+LSDED+VLHLF
Sbjct: 121 FLIVIFRLTLSAFNSLSDEDNVLHLF 146

[Close]

BLAST of CmoCh07G013500 vs. NCBI nr
Match: gi|659083289|ref|XP_008442268.1| (PREDICTED: protein cornichon homolog 1 isoform X1 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 5.0e-59
Identity = 120/147 (81.63%), Postives = 134/147 (91.16%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           MAW+LIFWF+SFC NIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+F
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVLPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPV+CYHINLFLKREHLIDVTEVF+ LKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRLTL-----SAFNALSDEDDV 143
           FL+VIFR+ +     S F++  ++ D+
Sbjct: 121 FLIVIFRIIMVAEMKSVFDSAPEDIDI 147

[Close]

BLAST of CmoCh07G013500 vs. NCBI nr
Match: gi|225441700|ref|XP_002282874.1| (PREDICTED: protein cornichon homolog 1 isoform X2 [Vitis vinifera])

HSP 1 Score: 183.7 bits (465), Expect = 2.3e-43
Identity = 89/146 (60.96%), Postives = 117/146 (80.14%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           M+W LI W + F INIALL   FYQ+L L+DLEADY+N Y+SSSRIN +VVP+F++QG+ 
Sbjct: 1   MSWELILWIIFFFINIALLGSTFYQILCLSDLEADYMNPYESSSRINSIVVPDFILQGVL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           C LFL T HWF+FLI+VP++CY+  LF+KR+HLIDVTEVF+TL  EK +R AKL FYL L
Sbjct: 61  CILFLLTWHWFLFLISVPITCYNAMLFMKRQHLIDVTEVFRTLSAEKKYRVAKLAFYLFL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
           F++VI RL +  FN++ DE+D +H+F
Sbjct: 121 FIIVIIRLVICIFNSVIDEEDAVHIF 146

[Close]

BLAST of CmoCh07G013500 vs. NCBI nr
Match: gi|1009161685|ref|XP_015899029.1| (PREDICTED: protein cornichon homolog 1 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 179.5 bits (454), Expect = 4.3e-42
Identity = 88/146 (60.27%), Postives = 117/146 (80.14%), Query Frame = 1


Query: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60
           M+W LIFW + F I++ LL   FYQL++LTDLEADY+N ++SSSRIN LV PEF+V G+ 
Sbjct: 1   MSWDLIFWIICFAIDLGLLASTFYQLVILTDLEADYINPFESSSRINSLVYPEFIVHGVL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120
           C+LFL T HWF+FLIT+P+S Y + LFLKR+HL+DVTEVF+ L  EK  R  KL FYL L
Sbjct: 61  CALFLLTWHWFLFLITLPMSAYFVMLFLKRKHLVDVTEVFRLLNAEKRLRKLKLAFYLGL 120

Query: 121 FLVVIFRLTLSAFNALSDEDDVLHLF 147
            +++IFRLTLSAFN+L++E+D +++F
Sbjct: 121 LVIIIFRLTLSAFNSLTNEEDAVNIF 146

The following BLAST results are available for this feature:

BLAST of CmoCh07G013500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNIH1_ARATH	1.2e-39	55.48	Protein cornichon homolog 1 OS=Arabidopsis thaliana GN=At3g12180 PE=2 SV=1	[more]
CNIH4_ARATH	7.3e-26	48.09	Protein cornichon homolog 4 OS=Arabidopsis thaliana GN=At1g12390 PE=1 SV=1	[more]
CNIH3_ARATH	1.8e-24	48.09	Protein cornichon homolog 3 OS=Arabidopsis thaliana GN=At1g62880 PE=2 SV=1	[more]
CNIH2_ARATH	1.7e-22	46.67	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana GN=At1g12340 PE=2 S...	[more]
CNIH5_ARATH	1.2e-20	44.53	Protein cornichon homolog 5 OS=Arabidopsis thaliana GN=At4g12090 PE=2 SV=2	[more]

BLAST of CmoCh07G013500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2RVQ7_GOSRA	9.6e-41	61.64	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G140000 PE=4 SV=1	[more]
A0A087H8Y0_ARAAL	6.2e-40	58.22	Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G132300 PE=4 SV=1	[more]
A0A061EYA2_THECC	8.1e-40	60.27	Cornichon family protein isoform 1 OS=Theobroma cacao GN=TCM_024831 PE=4 SV=1	[more]
V4LEA5_EUTSA	1.4e-39	57.53	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021709mg PE=4 SV=1	[more]
V7BKT5_PHAVU	1.8e-39	59.06	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G256900g PE=4 SV=1	[more]

BLAST of CmoCh07G013500 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12180.1	6.6e-41	55.48	Cornichon family protein	[more]
AT1G12390.1	4.1e-27	48.09	Cornichon family protein	[more]
AT1G62880.1	1.0e-25	48.09	Cornichon family protein	[more]
AT1G12340.1	9.5e-24	46.67	Cornichon family protein	[more]
AT4G12090.1	6.8e-22	44.53	Cornichon family protein	[more]

BLAST of CmoCh07G013500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453826\|ref\|XP_004144657.1\|	5.4e-69	93.15	PREDICTED: protein cornichon homolog 1 [Cucumis sativus]	[more]
gi\|659083291\|ref\|XP_008442270.1\|	4.5e-68	91.78	PREDICTED: protein cornichon homolog 1 isoform X2 [Cucumis melo]	[more]
gi\|659083289\|ref\|XP_008442268.1\|	5.0e-59	81.63	PREDICTED: protein cornichon homolog 1 isoform X1 [Cucumis melo]	[more]
gi\|225441700\|ref\|XP_002282874.1\|	2.3e-43	60.96	PREDICTED: protein cornichon homolog 1 isoform X2 [Vitis vinifera]	[more]
gi\|1009161685\|ref\|XP_015899029.1\|	4.3e-42	60.27	PREDICTED: protein cornichon homolog 1 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003377	Cornichon

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0006810	transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G013500.1	CmoCh07G013500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 6..126 score: 9.6
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 5..126 score: 1.6
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..139 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G013500	CmaCh03G000820	Cucurbita maxima (Rimu)	cmacmoB674
CmoCh07G013500	CmaCh07G013050	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G013500	MELO3C009082	Melon (DHL92) v3.5.1	cmomeB794
CmoCh07G013500	ClCG04G000520	Watermelon (Charleston Gray)	cmowcgB771
CmoCh07G013500	CSPI04G21190	Wild cucumber (PI 183967)	cmocpiB858
CmoCh07G013500	Cp4.1LG19g00760	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G013500	Cp4.1LG10g11810	Cucurbita pepo (Zucchini)	cmocpeB803
CmoCh07G013500	MELO3C009082.2	Melon (DHL92) v3.6.1	cmomedB898
CmoCh07G013500	CsaV3_4G031560	Cucumber (Chinese Long) v3	cmocucB1001
CmoCh07G013500	Cla97C04G068860	Watermelon (97103) v2	cmowmbB869
CmoCh07G013500	Bhi03G002155	Wax gourd	cmowgoB1068
CmoCh07G013500	CsGy4G019800	Cucumber (Gy14) v2	cgybcmoB539
CmoCh07G013500	Carg12732	Silver-seed gourd	carcmoB0395
CmoCh07G013500	Carg22470	Silver-seed gourd	carcmoB0275

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh07G013500	CmoCh03G000850	Cucurbita moschata (Rifu)	cmocmoB461

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G013500	Bottle gourd (USVL1VR-Ls)	cmolsiB778
CmoCh07G013500	Bottle gourd (USVL1VR-Ls)	cmolsiB780
CmoCh07G013500	Melon (DHL92) v3.6.1	cmomedB897
CmoCh07G013500	Watermelon (97103) v1	cmowmB819