Cp4.1LG09g05610 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g05610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ribosomal protein
Location	Cp4.1LG09 : 4585798 .. 4588035 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGTATCCCAACAAATTGGACGGCCCAGTTTCAACGTTCCATCTCTTACTTGGGCACGTATATATTTTCCTTTCTCTAAACCCTAATTTCTTCATCTCTTTCTTTTCCTCCGGTAAGCCGTCGCTTCTCAGACTTTCCCTCTTCAAGTCTTAACCTTTTAGCATGACAATAATTCTCAGTTCATGCTTTTTTGAGTTTTCAGCATTTGTTCTTCTGTTAGTGCTTTCTTTTTAGTCCGATTTGCAGTTTTCTTTCGTTTACTGCTCATGTTCTTGTTAGTTTCTCGATTGATTTTTGCTTTTGGTCAAGGATCTTACGTTTTTTGAACTCTGTTTGTGCACAGGACTGAAGTGTAGAGCATCTTTGCAAAGGCGAAGATTCGAATATGAGGTTTGTTTTACAGCATTTTCTTTGGTTTGGATATCTGTTTTGTTTTCTGATTTATGTTTGTATATGAATTTTAGCTAGTTATGATGGATGGACACACGTTATTTACTTTCTAAGATTCTACTGTTTTGGGTTTTTTGGTGGCTGGTCTTTGGAATAATCGATTCTGGATAGTTTAATCTACCATCTCGAGTATTGTGAAGTTTTGATAATGTTATGGATGGATGATTGTTAGGAAGTAGGTTTGCATTCATGTGCTTCCTTTAAAATTTTCAATGTAGCATCGTGTTGATTATACCTAGTGTTTGGGGTCTTATTTTGTCATCATTTCTTCCTACAGTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGATGCCTTGCACGTTGAGGAGGTAATTTTACTTCTTAAATCTTAAACAATTCTTTTTGCAACCCATAGTAATTTATTTTCTAATGTTCAAAATTTGGAACTTGGCATATTTCTAATGTTTAATTTTATCATATCTGTTAATATATTCTCTGTTCCTGTACTCCTACTGTTTAAGGATTTCTGGTGCGTATGAGCCTAAATACTAACGTTTCCAATGATTTGATATCAGTTCATGACCACTTTTCTGTATTGTGGATGTTTATTATGTTGATAATTTGACGTGTATCAATTTACTGGTTCTACCTGTATTTAATTTTCCTTATGCTTAGAGGACATATCCTGACAGGGTTTCATTAAAATATATTTCAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGTCTCAACAAAGCAGGCAAGAACATTCTTTAAACATACTGTTTTACTGTTTTTGTTCACCAAATTATATAATTGATAACCTCCTGAAAACTCTTATCCTTGTTCATGTTTCACAGAAAGGAAGGTAGTCAAAGCTAGAACTTTTATCGGCTCGTATTATATGCTAATTCTGTTTCCTTCATCCTTTTTGCCATTCCAGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTGTGCATGGGGGTTGCCGTTGGGAACGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAAAAGAACTGGCAGAACGTAAGTTCCATCTCGGTTCTGCATTAAACTTGAACTTGATCTGTTTCAATCATTTTCACTCATGGCTATTGCTTGTTTGTTGCAGGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCATACCGGGTTTTCTAAGCTCTGTTAGGAAACTTGTCAATCTTGTGTTCGTTCCTTTTATCGTTGAAGTTATTTTCTCGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGGATATGATTCTTGAATTAAGAAACAAAGATGCGTTTTCTACTTTAATTATAATGAAACTTCTATTCATACTAACCCAACCCACATCTTGACGTTTGTTTACATGATTTGTTACATTTACTGCGGCTGATGGTATTACAAGTTTTGGTATCTAGC

mRNA sequence

ATGAAGCTAGTTATGATGGATGGACACACTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGATGCCTTGCACGTTGAGGAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTGTGCATGGGGGTTGCCGTTGGGAACGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAAAAGAACTGGCAGAACGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCATACCGGGTTTTCTAAGCTCTGTTAGGAAACTTGTCAATCTTGTGTTCGTTCCTTTTATCGTTGAAGTTATTTTCTCGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGGATATGATTCTTGAATTAAGAAACAAAGATGCGTTTTCTACTTTAATTATAATGAAACTTCTATTCATACTAACCCAACCCACATCTTGACGTTTGTTTACATGATTTGTTACATTTACTGCGGCTGATGGTATTACAAGTTTTGGTATCTAGC

Coding sequence (CDS)

ATGAAGCTAGTTATGATGGATGGACACACTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGATGCCTTGCACGTTGAGGAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTGTGCATGGGGGTTGCCGTTGGGAACGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAAAAGAACTGGCAGAACGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCATACCGGGTTTTCTAA

Protein sequence

MKLVMMDGHTKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF

Homology

[Close]

BLAST of Cp4.1LG09g05610 vs. Swiss-Prot
Match: R10A_ORYSJ (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.7e-98
Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQSE L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ QN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           +QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 182 IQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. Swiss-Prot
Match: R10A_ORYSI (60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.7e-98
Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQSE L+EAIS +  +S EK R FTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEA+IKQIPR
Sbjct: 62  MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ QN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           +QMSVNFLVSLLKKNWQNVRCLY+KSTMGK  RVF
Sbjct: 182 IQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. Swiss-Prot
Match: R10A3_ARATH (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.1e-97
Identity = 187/216 (86.57%), Postives = 198/216 (91.67%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKK-RNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 69
           +KLQSEA+REAISSI T   E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2   SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 70  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 129
           KMK+CMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQIP
Sbjct: 62  KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIP 121

Query: 130 RLLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 189
           RLLGP     GKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 122 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181

Query: 190 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Cp4.1LG09g05610 vs. Swiss-Prot
Match: R10A1_ARATH (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.1e-97
Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQSEA+REAI++I   S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.5e-96
Identity = 182/215 (84.65%), Postives = 196/215 (91.16%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQSEA+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. TrEMBL
Match: A0A0A0KEW8_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 6.3e-105
Identity = 200/215 (93.02%), Postives = 206/215 (95.81%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAISSIF DS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPR
Sbjct: 62  MKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. TrEMBL
Match: A0A0A0LVE6_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.1e-104
Identity = 198/215 (92.09%), Postives = 208/215 (96.74%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAISSIFTDSNEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIPR
Sbjct: 62  MKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVFQN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. TrEMBL
Match: A0A0B2R114_GLYSO (Ribosomal protein OS=Glycine soja GN=glysoja_026213 PE=3 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.9e-102
Identity = 196/215 (91.16%), Postives = 202/215 (93.95%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAIS I TDS EK R F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQ+SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 182 VQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. TrEMBL
Match: C6SVL1_SOYBN (Ribosomal protein OS=Glycine max GN=GLYMA_12G184900 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 2.9e-102
Identity = 196/215 (91.16%), Postives = 202/215 (93.95%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAIS I TDS EK R F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQ+SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 182 VQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. TrEMBL
Match: A0A0B0N248_GOSAR (60S ribosomal L10a-1-like protein OS=Gossypium arboreum GN=F383_32910 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 5.0e-102
Identity = 193/210 (91.90%), Postives = 201/210 (95.71%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAIS+I  +S EK R FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISTIVANSKEKNRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 121

Query: 130 LLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSV 189
           LLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQ+FQNVQMSV
Sbjct: 122 LLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQNVQMSV 181

Query: 190 NFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           NFLVSLLKKNWQNVRCLYLKSTMG S R+F
Sbjct: 182 NFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 211

[Close]

BLAST of Cp4.1LG09g05610 vs. TAIR10
Match: AT5G22440.1 (AT5G22440.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 355.9 bits (912), Expect = 1.8e-98
Identity = 187/216 (86.57%), Postives = 198/216 (91.67%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKK-RNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 69
           +KLQSEA+REAISSI T   E K RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2   SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61

Query: 70  KMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 129
           KMK+CMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE+VIKQIP
Sbjct: 62  KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIP 121

Query: 130 RLLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 189
           RLLGP     GKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 122 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181

Query: 190 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           NVQMSVNFLVSLLKKNWQNVRCLYLKSTMG   RVF
Sbjct: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217

[Close]

BLAST of Cp4.1LG09g05610 vs. TAIR10
Match: AT1G08360.1 (AT1G08360.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 355.5 bits (911), Expect = 2.3e-98
Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQSEA+REAI++I   S  KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. TAIR10
Match: AT2G27530.1 (AT2G27530.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 352.4 bits (903), Expect = 1.9e-97
Identity = 182/215 (84.65%), Postives = 196/215 (91.16%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQSEA+REAI++I   S EKKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMG   R+F
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. TAIR10
Match: AT2G42650.1 (AT2G42650.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 52.4 bits (124), Expect = 4.2e-07
Identity = 51/229 (22.27%), Postives = 103/229 (44.98%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETI-------ELQIGLKNYDPQKDKRFSGSVKL 69
           +++  + + +A+ ++  + NEK R     +        L + LK   PQ++   +  + L
Sbjct: 2   SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKI-PQRNFTNAYRIPL 61

Query: 70  PH----IPRPKMKLCMLGD-----ALHVEEAEK-IGLDYMDVEGLKKLNKNK------KL 129
           PH          +LC++ D      L  E+A+K I  + + +  + KL+K K      + 
Sbjct: 62  PHPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFES 121

Query: 130 VKKLAKKYHAFLASEAVIKQIPRLLGPGKFPTLVT------HQESLESKVNETKAMVKFQ 189
            +KL   Y  F +   VI  +P+L+G   F +  T         + + ++ +      F 
Sbjct: 122 KRKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFF 181

Query: 190 LKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLK 210
           ++   C  + V  ++ME   + +NV  ++N +V +L   W+ +R L+LK
Sbjct: 182 MRTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLK 229

[Close]

BLAST of Cp4.1LG09g05610 vs. TAIR10
Match: AT3G58660.1 (AT3G58660.1 Ribosomal protein L1p/L10e family)

HSP 1 Score: 48.5 bits (114), Expect = 6.0e-06
Identity = 53/196 (27.04%), Postives = 92/196 (46.94%), Query Frame = 1


Query: 37  ETIELQIGLKNYDPQKDKRFSGSVKLPH-IPRPKM---KLCMLGD-----ALHVEEA-EK 96
           E + L + LK   PQK +  +  + LPH +  P +   ++C++ D      L  ++A +K
Sbjct: 56  ELVYLFVTLKKI-PQKTRTNAYRIPLPHPLINPTVDSPEICLIIDDRPKSGLTKDDAMKK 115

Query: 97  IGLDYMDVEGLKKLNKNKKLVK------KLAKKYHAFLASEAVIKQIPRLLGPGKFPTLV 156
           I  + + +  + KL+K K   K      KL   Y  F     +I  +PR++G  KF T  
Sbjct: 116 IKSENIPITKVIKLSKLKSDYKAFEAKRKLCDSYDMFFTDRRIIPLLPRVIGK-KFFTSK 175

Query: 157 THQESLESKVNETKAMVK-------FQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLV 210
               +L+ K    K  ++       F ++   C  + VG ++M+  ++ +NV  ++N LV
Sbjct: 176 KIPVALDLKHRNWKHQIEKACGSAMFFIRTGTCSVIKVGKLSMDICEITENVMATLNGLV 235

[Close]

BLAST of Cp4.1LG09g05610 vs. NCBI nr
Match: gi|659117410|ref|XP_008458587.1| (PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 9.1e-105
Identity = 200/215 (93.02%), Postives = 206/215 (95.81%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAISSIF DS EKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIPR
Sbjct: 62  MKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMGK+YRVF
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKAYRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. NCBI nr
Match: gi|449443440|ref|XP_004139485.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.6e-104
Identity = 198/215 (92.09%), Postives = 208/215 (96.74%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAISSIFTDSNEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIPR
Sbjct: 62  MKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNV+M+EKQVFQN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNVSMDEKQVFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. NCBI nr
Match: gi|659071695|ref|XP_008461453.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo])

HSP 1 Score: 385.2 bits (988), Expect = 7.7e-104
Identity = 197/215 (91.63%), Postives = 207/215 (96.28%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAISSIFTDSNEKKR FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA H+EEAEKIGL+YMDVEGLKKLNKNKKLVKKLAKKYHAFLASE++IKQIPR
Sbjct: 62  MKICMLGDASHIEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESIIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGNV+M+EKQVFQN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQETLESKVNETKATVKFQLKKVLCMGVAVGNVSMDEKQVFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. NCBI nr
Match: gi|351721216|ref|NP_001236946.1| (uncharacterized protein LOC100305550 [Glycine max])

HSP 1 Score: 379.4 bits (973), Expect = 4.2e-102
Identity = 196/215 (91.16%), Postives = 202/215 (93.95%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAIS I TDS EK R F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISGIMTDSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 121

Query: 130 LLGP-----GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQN 189
           LLGP     GKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNV+MEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQN 181

Query: 190 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           VQ+SVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
Sbjct: 182 VQLSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 216

[Close]

BLAST of Cp4.1LG09g05610 vs. NCBI nr
Match: gi|728824513|gb|KHG05814.1| (60S ribosomal L10a-1 -like protein [Gossypium arboreum])

HSP 1 Score: 378.6 bits (971), Expect = 7.2e-102
Identity = 193/210 (91.90%), Postives = 201/210 (95.71%), Query Frame = 1


Query: 10  TKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 69
           +KLQS+ALREAIS+I  +S EK R FTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK
Sbjct: 2   SKLQSDALREAISTIVANSKEKNRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61

Query: 70  MKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPR 129
           MK+CMLGDA HVEEAEKIGLDYMDVE LKKLNKNKKLVKKLAKKYHAFLASE+VIKQIPR
Sbjct: 62  MKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 121

Query: 130 LLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSV 189
           LLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQ+FQNVQMSV
Sbjct: 122 LLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQIFQNVQMSV 181

Query: 190 NFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 220
           NFLVSLLKKNWQNVRCLYLKSTMG S R+F
Sbjct: 182 NFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 211

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g05610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
R10A_ORYSJ	1.7e-98	85.58	60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1	[more]
R10A_ORYSI	1.7e-98	85.58	60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1	[more]
R10A3_ARATH	3.1e-97	86.57	60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1	[more]
R10A1_ARATH	4.1e-97	85.58	60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1	[more]
R10A2_ARATH	3.5e-96	84.65	60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1	[more]

BLAST of Cp4.1LG09g05610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEW8_CUCSA	6.3e-105	93.02	Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1	[more]
A0A0A0LVE6_CUCSA	1.1e-104	92.09	Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1	[more]
A0A0B2R114_GLYSO	2.9e-102	91.16	Ribosomal protein OS=Glycine soja GN=glysoja_026213 PE=3 SV=1	[more]
C6SVL1_SOYBN	2.9e-102	91.16	Ribosomal protein OS=Glycine max GN=GLYMA_12G184900 PE=2 SV=1	[more]
A0A0B0N248_GOSAR	5.0e-102	91.90	60S ribosomal L10a-1-like protein OS=Gossypium arboreum GN=F383_32910 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g05610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22440.1	1.8e-98	86.57	Ribosomal protein L1p/L10e family	[more]
AT1G08360.1	2.3e-98	85.58	Ribosomal protein L1p/L10e family	[more]
AT2G27530.1	1.9e-97	84.65	Ribosomal protein L1p/L10e family	[more]
AT2G42650.1	4.2e-07	22.27	Ribosomal protein L1p/L10e family	[more]
AT3G58660.1	6.0e-06	27.04	Ribosomal protein L1p/L10e family	[more]

BLAST of Cp4.1LG09g05610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117410\|ref\|XP_008458587.1\|	9.1e-105	93.02	PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo]	[more]
gi\|449443440\|ref\|XP_004139485.1\|	1.6e-104	92.09	PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus]	[more]
gi\|659071695\|ref\|XP_008461453.1\|	7.7e-104	91.63	PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo]	[more]
gi\|351721216\|ref\|NP_001236946.1\|	4.2e-102	91.16	uncharacterized protein LOC100305550 [Glycine max]	[more]
gi\|728824513\|gb\|KHG05814.1\|	7.2e-102	91.90	60S ribosomal L10a-1 -like protein [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0015934	large ribosomal subunit

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0003723	RNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR023674	Ribosomal_L1-like
IPR016095	Ribosomal_L1_3-a/b-sand
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich
IPR002143	Ribosomal_L1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0022900	electron transport chain
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g05610.1	Cp4.1LG09g05610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002143	Ribosomal protein L1	PIR	PIRSF002155	RPL1p_RPL1a_RPL10e_RPL1o	coord: 4..219 score: 7.0
IPR016094	Ribosomal protein L1, 2-layer alpha/beta-sandwich	GENE3D	G3DSA:3.30.190.20		coord: 155..218 score: 3.2E-48coord: 14..68 score: 3.2
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	G3DSA:3.40.50.790		coord: 70..154 score: 1.5
IPR023674	Ribosomal protein L1-like	unknown	SSF56808	Ribosomal protein L1	coord: 29..219 score: 3.01
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 11..219 score: 6.6E
None	No IPR available	PANTHER	PTHR23105:SF55	SUBFAMILY NOT NAMED	coord: 11..219 score: 6.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g05610	CmaCh18G006570	Cucurbita maxima (Rimu)	cmacpeB415
Cp4.1LG09g05610	Cla001098	Watermelon (97103) v1	cpewmB045
Cp4.1LG09g05610	Csa1G163140	Cucumber (Chinese Long) v2	cpecuB020
Cp4.1LG09g05610	MELO3C004713	Melon (DHL92) v3.5.1	cpemeB028
Cp4.1LG09g05610	ClCG01G012240	Watermelon (Charleston Gray)	cpewcgB029
Cp4.1LG09g05610	CSPI01G14690	Wild cucumber (PI 183967)	cpecpiB017
Cp4.1LG09g05610	MELO3C004713.2	Melon (DHL92) v3.6.1	cpemedB033
Cp4.1LG09g05610	CsaV3_1G014820	Cucumber (Chinese Long) v3	cpecucB0024
Cp4.1LG09g05610	Bhi08G000049	Wax gourd	cpewgoB0050
Cp4.1LG09g05610	CsGy1G014580	Cucumber (Gy14) v2	cgybcpeB007
Cp4.1LG09g05610	Carg26274	Silver-seed gourd	carcpeB0000

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g05610	Cucurbita moschata (Rifu)	cmocpeB374
Cp4.1LG09g05610	Bottle gourd (USVL1VR-Ls)	cpelsiB029
Cp4.1LG09g05610	Watermelon (Charleston Gray)	cpewcgB034
Cp4.1LG09g05610	Watermelon (97103) v1	cpewmB048
Cp4.1LG09g05610	Watermelon (97103) v1	cpewmB053