Cp4.1LG09g05610.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTATCCCAACAAATTGGACGGCCCAGTTTCAACGTTCCATCTCTTACTTGGGCACGTATATATTTTCCTTTCTCTAAACCCTAATTTCTTCATCTCTTTCTTTTCCTCCGGTAAGCCGTCGCTTCTCAGACTTTCCCTCTTCAAGTCTTAACCTTTTAGCATGACAATAATTCTCAGTTCATGCTTTTTTGAGTTTTCAGCATTTGTTCTTCTGTTAGTGCTTTCTTTTTAGTCCGATTTGCAGTTTTCTTTCGTTTACTGCTCATGTTCTTGTTAGTTTCTCGATTGATTTTTGCTTTTGGTCAAGGATCTTACGTTTTTTGAACTCTGTTTGTGCACAGGACTGAAGTGTAGAGCATCTTTGCAAAGGCGAAGATTCGAATATGAGGTTTGTTTTACAGCATTTTCTTTGGTTTGGATATCTGTTTTGTTTTCTGATTTATGTTTGTATATGAATTTTAGCTAGTTATGATGGATGGACACACGTTATTTACTTTCTAAGATTCTACTGTTTTGGGTTTTTTGGTGGCTGGTCTTTGGAATAATCGATTCTGGATAGTTTAATCTACCATCTCGAGTATTGTGAAGTTTTGATAATGTTATGGATGGATGATTGTTAGGAAGTAGGTTTGCATTCATGTGCTTCCTTTAAAATTTTCAATGTAGCATCGTGTTGATTATACCTAGTGTTTGGGGTCTTATTTTGTCATCATTTCTTCCTACAGTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGATGCCTTGCACGTTGAGGAGGTAATTTTACTTCTTAAATCTTAAACAATTCTTTTTGCAACCCATAGTAATTTATTTTCTAATGTTCAAAATTTGGAACTTGGCATATTTCTAATGTTTAATTTTATCATATCTGTTAATATATTCTCTGTTCCTGTACTCCTACTGTTTAAGGATTTCTGGTGCGTATGAGCCTAAATACTAACGTTTCCAATGATTTGATATCAGTTCATGACCACTTTTCTGTATTGTGGATGTTTATTATGTTGATAATTTGACGTGTATCAATTTACTGGTTCTACCTGTATTTAATTTTCCTTATGCTTAGAGGACATATCCTGACAGGGTTTCATTAAAATATATTTCAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGTCTCAACAAAGCAGGCAAGAACATTCTTTAAACATACTGTTTTACTGTTTTTGTTCACCAAATTATATAATTGATAACCTCCTGAAAACTCTTATCCTTGTTCATGTTTCACAGAAAGGAAGGTAGTCAAAGCTAGAACTTTTATCGGCTCGTATTATATGCTAATTCTGTTTCCTTCATCCTTTTTGCCATTCCAGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTGTGCATGGGGGTTGCCGTTGGGAACGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAAAAGAACTGGCAGAACGTAAGTTCCATCTCGGTTCTGCATTAAACTTGAACTTGATCTGTTTCAATCATTTTCACTCATGGCTATTGCTTGTTTGTTGCAGGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCATACCGGGTTTTCTAAGCTCTGTTAGGAAACTTGTCAATCTTGTGTTCGTTCCTTTTATCGTTGAAGTTATTTTCTCGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGGATATGATTCTTGAATTAAGAAACAAAGATGCGTTTTCTACTTTAATTATAATGAAACTTCTATTCATACTAACCCAACCCACATCTTGACGTTTGTTTACATGATTTGTTACATTTACTGCGGCTGATGGTATTACAAGTTTTGGTATCTAGC ATGAAGCTAGTTATGATGGATGGACACACTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGATGCCTTGCACGTTGAGGAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTGTGCATGGGGGTTGCCGTTGGGAACGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAAAAGAACTGGCAGAACGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCATACCGGGTTTTCTAAGCTCTGTTAGGAAACTTGTCAATCTTGTGTTCGTTCCTTTTATCGTTGAAGTTATTTTCTCGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGGATATGATTCTTGAATTAAGAAACAAAGATGCGTTTTCTACTTTAATTATAATGAAACTTCTATTCATACTAACCCAACCCACATCTTGACGTTTGTTTACATGATTTGTTACATTTACTGCGGCTGATGGTATTACAAGTTTTGGTATCTAGC ATGAAGCTAGTTATGATGGATGGACACACTAAGCTTCAGAGTGAGGCATTGAGAGAAGCTATCTCATCTATCTTCACTGATAGCAATGAGAAAAAGAGAAATTTTACTGAGACCATTGAGCTTCAGATCGGGCTGAAGAACTATGACCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCGCACATTCCCCGTCCCAAGATGAAGCTTTGCATGCTTGGAGATGCCTTGCACGTTGAGGAGGCCGAAAAGATTGGTCTAGACTACATGGATGTGGAAGGCTTGAAGAAGCTAAACAAGAACAAGAAATTGGTGAAGAAGCTCGCCAAGAAATACCATGCCTTTTTGGCATCTGAGGCTGTAATTAAGCAGATCCCACGTCTTCTCGGCCCTGGAAAGTTCCCAACATTGGTGACACACCAAGAATCGCTGGAATCGAAAGTTAACGAGACCAAGGCAATGGTCAAATTTCAACTTAAGAAGGTTCTGTGCATGGGGGTTGCCGTTGGGAACGTTGCCATGGAGGAGAAGCAAGTCTTCCAAAACGTGCAAATGAGCGTTAATTTCCTGGTTTCGTTGTTGAAAAAGAACTGGCAGAACGTTAGGTGCCTGTACCTGAAGAGCACAATGGGGAAGTCATACCGGGTTTTCTAA MKLVMMDGHTKLQSEALREAISSIFTDSNEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKLCMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF
BLAST of Cp4.1LG09g05610.1 vs. Swiss-Prot
Match: R10A_ORYSJ (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica GN=RPL10A PE=1 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 1.7e-98 Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. Swiss-Prot
Match: R10A_ORYSI (60S ribosomal protein L10a OS=Oryza sativa subsp. indica GN=RPL10A PE=3 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 1.7e-98 Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. Swiss-Prot
Match: R10A3_ARATH (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana GN=RPL10AC PE=1 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 3.1e-97 Identity = 187/216 (86.57%), Postives = 198/216 (91.67%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. Swiss-Prot
Match: R10A1_ARATH (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana GN=RPL10AA PE=1 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 4.1e-97 Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=1 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 3.5e-96 Identity = 182/215 (84.65%), Postives = 196/215 (91.16%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TrEMBL
Match: A0A0A0KEW8_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_6G152330 PE=3 SV=1) HSP 1 Score: 388.3 bits (996), Expect = 6.3e-105 Identity = 200/215 (93.02%), Postives = 206/215 (95.81%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TrEMBL
Match: A0A0A0LVE6_CUCSA (Ribosomal protein OS=Cucumis sativus GN=Csa_1G163140 PE=3 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 1.1e-104 Identity = 198/215 (92.09%), Postives = 208/215 (96.74%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TrEMBL
Match: A0A0B2R114_GLYSO (Ribosomal protein OS=Glycine soja GN=glysoja_026213 PE=3 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 2.9e-102 Identity = 196/215 (91.16%), Postives = 202/215 (93.95%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TrEMBL
Match: C6SVL1_SOYBN (Ribosomal protein OS=Glycine max GN=GLYMA_12G184900 PE=2 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 2.9e-102 Identity = 196/215 (91.16%), Postives = 202/215 (93.95%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TrEMBL
Match: A0A0B0N248_GOSAR (60S ribosomal L10a-1-like protein OS=Gossypium arboreum GN=F383_32910 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 5.0e-102 Identity = 193/210 (91.90%), Postives = 201/210 (95.71%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TAIR10
Match: AT5G22440.1 (AT5G22440.1 Ribosomal protein L1p/L10e family) HSP 1 Score: 355.9 bits (912), Expect = 1.8e-98 Identity = 187/216 (86.57%), Postives = 198/216 (91.67%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TAIR10
Match: AT1G08360.1 (AT1G08360.1 Ribosomal protein L1p/L10e family) HSP 1 Score: 355.5 bits (911), Expect = 2.3e-98 Identity = 184/215 (85.58%), Postives = 197/215 (91.63%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TAIR10
Match: AT2G27530.1 (AT2G27530.1 Ribosomal protein L1p/L10e family) HSP 1 Score: 352.4 bits (903), Expect = 1.9e-97 Identity = 182/215 (84.65%), Postives = 196/215 (91.16%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TAIR10
Match: AT2G42650.1 (AT2G42650.1 Ribosomal protein L1p/L10e family) HSP 1 Score: 52.4 bits (124), Expect = 4.2e-07 Identity = 51/229 (22.27%), Postives = 103/229 (44.98%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. TAIR10
Match: AT3G58660.1 (AT3G58660.1 Ribosomal protein L1p/L10e family) HSP 1 Score: 48.5 bits (114), Expect = 6.0e-06 Identity = 53/196 (27.04%), Postives = 92/196 (46.94%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. NCBI nr
Match: gi|659117410|ref|XP_008458587.1| (PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis melo]) HSP 1 Score: 388.3 bits (996), Expect = 9.1e-105 Identity = 200/215 (93.02%), Postives = 206/215 (95.81%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. NCBI nr
Match: gi|449443440|ref|XP_004139485.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis sativus]) HSP 1 Score: 387.5 bits (994), Expect = 1.6e-104 Identity = 198/215 (92.09%), Postives = 208/215 (96.74%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. NCBI nr
Match: gi|659071695|ref|XP_008461453.1| (PREDICTED: 60S ribosomal protein L10a-1 [Cucumis melo]) HSP 1 Score: 385.2 bits (988), Expect = 7.7e-104 Identity = 197/215 (91.63%), Postives = 207/215 (96.28%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. NCBI nr
Match: gi|351721216|ref|NP_001236946.1| (uncharacterized protein LOC100305550 [Glycine max]) HSP 1 Score: 379.4 bits (973), Expect = 4.2e-102 Identity = 196/215 (91.16%), Postives = 202/215 (93.95%), Query Frame = 1
BLAST of Cp4.1LG09g05610.1 vs. NCBI nr
Match: gi|728824513|gb|KHG05814.1| (60S ribosomal L10a-1 -like protein [Gossypium arboreum]) HSP 1 Score: 378.6 bits (971), Expect = 7.2e-102 Identity = 193/210 (91.90%), Postives = 201/210 (95.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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