Cp4.1LG09g01160 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG09g01160
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG09 : 621649 .. 624869 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATATTTAAAAATGAAAGATTAATGTTTTTGAAAATTGTGATCCTGTCGCTTTCGCATGACCTCAAATTTGCAATTAAAAATGGGCTTATCTTCTTTGAGAAATTAGAGAAGAAACAGAGCTTTGAAACCAACAACAATGGCGGCCCTGGCTTGCTCATTCCCTTTACAGTGTCTAAAAACTCAGAGAAAAAGCAACCCACTATCACATCTTGAATTCGCTTCTCTTCAGAGTAATATCAAGGTAACCCCACACTCACCTGCAATAACTCTCATTCTTTTGTTCAACAACAACAATGGCGGCCCTGGATCTCTTTTCTTTTTTAATGAAACCCCACTGTTTCATTTCTCTCCTCACTGTGTTTTTGCTGATCTGTACAAATGAAATTAGGTTAGGAACCTCTGGAACTTTATCTATTGCCTTGTCTGGCTTTAAGTCTTATAACTTTACTATTTTATTGCTAATTTGCAGTCAAAGGAAACAGGAGTTGTTGATTTTACCCAACCTTCTAAAGTATATGAGAACGTGAAGCAGGTAGCATCTTCATCTTTCTTCCCCATTTGGCAAACATCAAACTTTTTTTTTTCTTTTCTCTGATGGGCCCTTCTATCTCCTCTGCAAATATTCGAGACCCAAATCTTCATCTTTGCCTTGTTTCTTTTTTCAGTTTAGGCAACTTCATTTGGTATGAGAAGTGAGGTTTATGTTCCTGCAATAAAAGTTGACACAGTGACTGCATTATCTCTGTGAGAAAGCAAGCATGGTGAGTGCAGGGCGAGATATTTTAATTCAACCTGCTGAGGATGGTTGTTGGGAGGGAGCCCACGTTGGCTAATTAAGGAGATGATTATGGGTTTATAAGTAAGAAATACATCTCCGTTGGTACGACGCATTTTAAGAAAAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTGGTTCCTTATCTGGTATCAAAGTCATGTCAATAGAATCCTTAAGTGTCAGATAAAGAAGTTGTGAGTCTCGAAAGTAAAGTCGAATATGACTCTCAAGTGTCGAACAAATAGTGTACTTTGTTCGAGGGCTCCAAAGAAAGAGTTTATCCTCGATTAATGGGAGGCTGTTCGAGGACTCCATAGGTCTCGGGAAAGGCTCTATGGTATACTTTATTCAAAGGGAGAATTGTTGAGAGGGAGCCACATTGGCTAATTAAAGGGATGATGAATACATTTTCATTGGTACGAGGCCTCGAAAGGCAAAGCCATGAGCATTTGAGCTCAAAGTGTATAATATCATACCATTTTGAAAGTGTGGTTCCTAAGATAACCCTCTCCTCTCTTTCTCTCTCTGCTTTAATGGATTTGGTCACAGGGTTGGCTTGTCACCCCAACTAAGTCCATTGGTTCTATCCTCCTCCACCAAGTTGCAATTTCAGCTTCCTCCCATTACTGCAATGTTGAGACTGTGGAATCCAGATAGAATGCACAGGTTAATCAAATCATATCATCAACTAATCTGCTATTTCAGTTTCAAAGGAAAAGAAAATCATAAAGAAGAAGAAAAATAGGCAATACTTTTCCATTTTCATTGCATTCGTACAACGCTGCGACCTTTGTCATTAAACTATAGATGAATCAACATGCACTCCTCTCTCACCTACATTAGCTTAGTTTAACATCTGAATCAAGTACATGGATTCAAGTCTTTCAAATCTCCATTAGTGTATTATAAAATACCATATGAAGCTGTACTAAAAAAATATGAAAAATACCAGAGGACATTAAGAGAGAGTAGTAAATGTAGCAGATGGGCATTAAATACTGACTTTTTTGGTGACAGGATGTGCCATCTTCAGATGCATCTCAAATAGCTAACAACCTCTTAAACTTGGGCCAGAACTGCAACAGAGAAGATATTTCAACCGGAGACTGGTAAGCTGAATTCATGAGCAGTCTCTTGCCTCATTTAATTTGATGTATCAGTCATTAAGAATTGAGACATGATGTGAAATAAAATATATATCATAATGTACCTGCTTTTATTCTCTTTACTTTCACCTCGTAAAGACATCAAACTCAGACGCCCATTTAGAAAAAAGACTCGCTTGCTTATTTCTCCTTTTTTCCTACCAGGCAAAGGGACAAGATGTTGGAGAAGATCGAGTTCGAGTGCACAGCCTAGTTCTTCCAGAGCATCCTTCCAGCACCAATGTCTACTTCTGGAGGGATAAGTTATAGATCGTGTTTCTGTTCTTATCTAACTAACATTAGGAAAGTTGCGAGAGACTCGTAAATTTAATCTTTTCTACTCATTCTACAACCAGAGTGGTGGTTGGGAGGGAGTCTCACATTGACTAATTAAGAGGATGATCATGAGTTTATAACTAAGGAATACATCTCTATTGGTAAGCAAAGCCATGAAAGCTTGTGCTCAAAGTGGACAATATCATACCAGAGTTGTAGGTTTTGGCTTGCACCACAGGTTTACACTCTCAAACATGATGTTACAAACGTGCAATGTCTAATACCAGGCTTGTTATTGGCAATTAGAAAGGTGGTGCGTCTTAAGGTACCTAAACACGCGTCAGGATATGCACCTCGAATTTTCTTGAATGATCTTCTTTATCCTGTATTGTGTCAAACTATCGCCTTTCTGTGCTACTTTGGCAGAATCTGGTATACGGCTGGGAGAATTTTTTATAAGGCTTCGAAGGCTCTCTCCTTGTAGCTCAATCTGAAACTTCATCTCCGTTGTTCATTGGACAGAGTGAACTTTCGACCTGATAACAAAAAGAAGAGTCAGGAGCTCAAGTTAGAGAGAATTGAAAGATAACTTTTGTTTTTCATTTTCCTTGTGTACATGGAGAAATTAAATTATAGTTCTTAAAGAAGGGTACCTCTAAAAAGGGTCACTGTGATACTTGTATGACCTCATTTGTTCTTCATATATTCTTTCATGTACATTTTTCTTCGCGCAAACATACAGATTCTAATAGATTCTTACATTTTCACCCCAACAAATTAGATTTGAGGAAAAAGAGTTGAGTTCAGCAGATCAGCCCAAGAAATCAAAGGCTCTCAATAGATGTTGAGGCTGCATCATGTCCAAATTATCATGCCAAGATCTGCTAAGCTTCTGTTCTATACAAATTCGTAACAAGCATTCATTTGGTTGCCCAAGCGCGAATGGCAACATGTACCAACTAGGTGCAGGATACTCCAAATT

mRNA sequence

AAGATATTTAAAAATGAAAGATTAATGTTTTTGAAAATTGTGATCCTGTCGCTTTCGCATGACCTCAAATTTGCAATTAAAAATGGGCTTATCTTCTTTGAGAAATTAGAGAAGAAACAGAGCTTTGAAACCAACAACAATGGCGGCCCTGGCTTGCTCATTCCCTTTACAGTGTCTAAAAACTCAGAGAAAAAGCAACCCACTATCACATCTTGAATTCGCTTCTCTTCAGAGTAATATCAAGTCAAAGGAAACAGGAGTTGTTGATTTTACCCAACCTTCTAAAGTATATGAGAACGTGAAGCAGGATGTGCCATCTTCAGATGCATCTCAAATAGCTAACAACCTCTTAAACTTGGGCCAGAACTGCAACAGAGAAGATATTTCAACCGGAGACTGGCAAAGGGACAAGATGTTGGAGAAGATCGAGTTCGAGTGCACAGCCTAGTTCTTCCAGAGCATCCTTCCAGCACCAATGTCTACTTCTGGAGGGATAAGTTATAGATCGTGTTTCTGTTCTTATCTAACTAACATTAGGAAAGTTGCGAGAGACTCGTAAATTTAATCTTTTCTACTCATTCTACAACCAGAGTGGTGGTTGGGAGGGAGTCTCACATTGACTAATTAAGAGGATGATCATGAGTTTATAACTAAGGAATACATCTCTATTGGTAAGCAAAGCCATGAAAGCTTGTGCTCAAAGTGGACAATATCATACCAGAGTTGTAGGTTTTGGCTTGCACCACAGGTTTACACTCTCAAACATGATGTTACAAACGTGCAATGTCTAATACCAGGCTTGTTATTGGCAATTAGAAAGGTGGTGCGTCTTAAGGTACCTAAACACGCGTCAGGATATGCACCTCGAATTTTCTTGAATGATCTTCTTTATCCTGTATTGTGTCAAACTATCGCCTTTCTGTGCTACTTTGGCAGAATCTGGTATACGGCTGGGAGAATTTTTTATAAGGCTTCGAAGGCTCTCTCCTTGTAGCTCAATCTGAAACTTCATCTCCGTTGTTCATTGGACAGAGTGAACTTTCGACCTGATAACAAAAAGAAGAGTCAGGAGCTCAAGTTAGAGAGAATTGAAAGATAACTTTTGTTTTTCATTTTCCTTGTGTACATGGAGAAATTAAATTATAGTTCTTAAAGAAGGGTACCTCTAAAAAGGGTCACTGTGATACTTGTATGACCTCATTTGTTCTTCATATATTCTTTCATGTACATTTTTCTTCGCGCAAACATACAGATTCTAATAGATTCTTACATTTTCACCCCAACAAATTAGATTTGAGGAAAAAGAGTTGAGTTCAGCAGATCAGCCCAAGAAATCAAAGGCTCTCAATAGATGTTGAGGCTGCATCATGTCCAAATTATCATGCCAAGATCTGCTAAGCTTCTGTTCTATACAAATTCGTAACAAGCATTCATTTGGTTGCCCAAGCGCGAATGGCAACATGTACCAACTAGGTGCAGGATACTCCAAATT

Coding sequence (CDS)

ATGGCGGCCCTGGCTTGCTCATTCCCTTTACAGTGTCTAAAAACTCAGAGAAAAAGCAACCCACTATCACATCTTGAATTCGCTTCTCTTCAGAGTAATATCAAGTCAAAGGAAACAGGAGTTGTTGATTTTACCCAACCTTCTAAAGTATATGAGAACGTGAAGCAGGATGTGCCATCTTCAGATGCATCTCAAATAGCTAACAACCTCTTAAACTTGGGCCAGAACTGCAACAGAGAAGATATTTCAACCGGAGACTGGCAAAGGGACAAGATGTTGGAGAAGATCGAGTTCGAGTGCACAGCCTAG

Protein sequence

MAALACSFPLQCLKTQRKSNPLSHLEFASLQSNIKSKETGVVDFTQPSKVYENVKQDVPSSDASQIANNLLNLGQNCNREDISTGDWQRDKMLEKIEFECTA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g01160.1Cp4.1LG09g01160.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g01160CmaCh18G012230Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g01160CmoCh18G012440Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g01160Carg26819Silver-seed gourdcarcpeB0008
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g01160Wax gourdcpewgoB0025
Cp4.1LG09g01160Cucurbita pepo (Zucchini)cpecpeB023
Cp4.1LG09g01160Cucurbita pepo (Zucchini)cpecpeB057
Cp4.1LG09g01160Cucurbita pepo (Zucchini)cpecpeB058
Cp4.1LG09g01160Cucumber (Gy14) v1cgycpeB0668
Cp4.1LG09g01160Cucumber (Gy14) v1cgycpeB0788
Cp4.1LG09g01160Cucurbita maxima (Rimu)cmacpeB339
Cp4.1LG09g01160Cucurbita maxima (Rimu)cmacpeB598
Cp4.1LG09g01160Cucurbita moschata (Rifu)cmocpeB303
Cp4.1LG09g01160Cucurbita moschata (Rifu)cmocpeB546
Cp4.1LG09g01160Wild cucumber (PI 183967)cpecpiB034
Cp4.1LG09g01160Wild cucumber (PI 183967)cpecpiB040
Cp4.1LG09g01160Cucumber (Chinese Long) v2cpecuB039
Cp4.1LG09g01160Cucumber (Chinese Long) v2cpecuB046
Cp4.1LG09g01160Bottle gourd (USVL1VR-Ls)cpelsiB035
Cp4.1LG09g01160Watermelon (Charleston Gray)cpewcgB023
Cp4.1LG09g01160Watermelon (Charleston Gray)cpewcgB046
Cp4.1LG09g01160Watermelon (97103) v1cpewmB032
Cp4.1LG09g01160Watermelon (97103) v1cpewmB036
Cp4.1LG09g01160Melon (DHL92) v3.5.1cpemeB020
Cp4.1LG09g01160Melon (DHL92) v3.5.1cpemeB043
Cp4.1LG09g01160Cucumber (Gy14) v2cgybcpeB287
Cp4.1LG09g01160Cucumber (Gy14) v2cgybcpeB584
Cp4.1LG09g01160Melon (DHL92) v3.6.1cpemedB024
Cp4.1LG09g01160Melon (DHL92) v3.6.1cpemedB050
Cp4.1LG09g01160Silver-seed gourdcarcpeB0994
Cp4.1LG09g01160Silver-seed gourdcarcpeB1214
Cp4.1LG09g01160Silver-seed gourdcarcpeB1267
Cp4.1LG09g01160Cucumber (Chinese Long) v3cpecucB0039
Cp4.1LG09g01160Cucumber (Chinese Long) v3cpecucB0045