CmaCh18G012230 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G012230
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDihydrodipicolinate reductase, bacterial/plant
LocationCma_Chr18 : 9648819 .. 9655502 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTATCTTCTTTGGGAAATTAGAGAAGAAACAGAGCTTTGAAACCGACAACAATGGCGGCCCTGGCTTGCTCATTCCCTTTACAGTGTCTAAAAACTCAGAGAAAAAGCAACCCACAATCACATCTTGAATTCGCTTCTCTTCGGAGTAATATCAAGGTAACCCCACACTCACCTGCAATAACTCTCATTGTTTTGTTCAACAACAACAATGGCGGCCCTGGGTCTCTTTTCTTTTATAATGAAACCCCACAGTTTCGTTTCTCTCCTCAGTGATTTTGCTGATCTGTACAAATGAAATTAGGTTAGGAACCTCTGGAACTTCATCTATTGCCTTGTCTAGCTTTAAGTCTTATAAGTTTTCTATTTTATTGCTAATTTGCAGTCAAAGGAAACAGGAGTTGTTGATTTTACCGAACCTTCTAAAGTATATGAGAACGTGAAGCAGGTAGCATCTTCATCTTTCTTCCCCATTTGGCAAACATCAAACTTTTTTTTTTTCTTTTCTCTGATGGGCCCTTCTATCTCCTCCGGAAATATTCGAGACCCAACACTTCATCTTTGCCTTGTTTCTTTTTTTCAATTTAGGCAACTTCATTTGGTTTGAGAAGTGAGGTTTATGTTCCTGGAATAAAAGTTGACACAGTGACTGCATTATCTCTGTGAGAAAGCAAGCATGGTGAGTACAGGGCGAGATATTTTAATTGAACCTGTCGAGGATTGTTGTTGGGGGAGCTCACGTTGGCTAATTAAGGAGATGATTATGAATTTATAAGTAAGGAATACATCTTTGTTGGTATGAGGTCTTTTGGAAAAATCAAAAGCAAGGCCACGAGAGCTTATGCTCAAAGTGGATGATATCATACTATTGCGGAGAATCATGGTTCCTAATCTAGTATTATAGTCATGCCCTTAACTTAGTCATGTTAATAGATTCCATAAGTGTCGAACAAAAAAGTTGTGAGTCTCAAAAGTATACTCAAATATGACTCGAGTGTCGCACAAATGGTGTACTTTGTTCGACGGCTCCAAAGAAGGAGTCTAGCCTCGATTAAGAGGAGACTGTTCGAGGACTCCATAAGTCTCAGGAAAGGCTCTATGATGTACTTTGTTCACAGGAAAAATTGTTGAGAGGGAGTCACATTGGCTAATTAAAGGGATGATCATGGATTTATAAGTAAAATGTACATTTTCATTGGTACGAGGCTTTTTGAAAAAATCGAAAGCAAAGCCATGATCATTTGAGCTCAAAAGTGGATAATATCATACCATTTTGAAAATCGTGGTTCCTTAGAGAACCCTCTCCTGTTCTTTCTCTCTGCTTTAATGGATTTGGTCACAGGGTTGGCTTGTCACCCCAACTCAGTCCATTGGTTCTATCTTCTCCAGCGAGTTGCAATTTCAGCTTCCTCCCATTACTGCAATGTTGAGACTGTGGAATCCAGATAGAATGCACAGGTTAATCAAATCATATCAACAATTAATTTGCTATTTCAGTTTCAAAGGAAAAGAAAATCATAAAGGAGAAGAAAAATAGGCAATACTTTTCCATTTTCATTGTGTTCGTACAAGGCTGTGACCTTTGTCATTAAACTATAGATGAATCAACATGCCCTCTTCTCTCTCACCTACATTAGCTTAGTTTAACATCTGAATCAAGTACATGGATTCAAGTCTTTCAAATCTCCATTAGTGTATTATAAAATACCATATGAAGCTGTACTAAAAAAAATAAAAAAATACCATAGGACGTTAAGAGAGAGAGAGAGAAGTAAATGTAGCAGATGGGCATTAAATACTGACTTTTTTGGTGACAGGATGTGCCATCTTCAGATGCATCTCAAATAGCTAACAACCTCTCAAACTTGGGCCAGAACTGCAACAGAGAAGATATTTCAACCGGAGACTGGTAAGCTGAATTCATGAGCAGTCTCTTGCCTCATTTAATTTGATGTATCAGTCATTAAGAATTGAGACATGATGTGAAATAAAATATATATCATAATGTACCTGCTTTTATTCTCTTTACTTTCACCTCGTATAGCTATCTTATTCATGGGATTCACTTGAAGGAATTCAGCCAACAAGGATCAAACTATGTCTACAAAATTTGCATAGAACTTATAAAGAGATTAGGAAAATTCACTTTGTTGATGACTAAGACACCAAACTCAGAAGCCCGTTTAGAAAAGGACTCGCTTGCTTATTTCTCCTTTTTTCCTGCAAGGCAAAGGGACAAGATGTTGGAGAAGATCGAGTTCGAGTGCACAGCCTAGTTCTTCCAGAGCATCCTTCCAGCACCAATATCTACTTCTGGAGAGGTAAGTTCTAGCTCGTGTTTCTGTTCTTATCTAACTAAGATTAGGGAAGTTGTGAGAGACTGGTAAATTTAATCTTTTCTACTCAGAGTGGTTGTTGGGAGGGAGTCTCACATTGGCTAAGGGGATGATTATAGGTTTATAACTAAGGAATACATATCCATTGGTAAGCAAAGCCATGAGAGCCTGTGCTCAAAGTGGACAATATCATATCATTGTGGAGGTTTGTGGTTCCTAACATCTACCACCAGAGTGGTAGGTTTTTCCTTTCCCAACACATGTCGTGGCTTGCACCACAGGTTTACGCTCTCAAACATTATGTTACAAAAGTGCAATGTCTAAAGCCAGGCTTGTTACTGGCAATTAGAAAGGTGGTGCGTCTTAAGGTACCTAAACACACGTCAGTATATGCACCTCAAATTTTCTTGAATGATCTTCATCCTGTATTGTGTCAAACTATCGCCTTTCTGTACTACTTTGGCAGAATCTGGTATACGGCTGGGAGAAATTTTTATAAGGCTTCGAAGGCTCTCTCCTAGTAGCTCAATCTGAAACTTCATCTCCGTTGTTCATTGAACAGAGTGACCTTTCGACCTGATAACAAAAAGAAGAGTCAGGAGCTCAAGTTAGAGAGAATTGAAAGATAAATTTTGTTTTTCATTTTCCTTGTGTACATGGAGAAATTAAATTATAGTTCTTAAAGAAGGGTACCTCTAAAAGGGGTCACTGGGATACTTGTATGACCTTATTTGTTCTTCATATATTCTTTCATGTACATTTTTCTTCGCCCAAACATATAGATTCTAATAGATTCTTACATTTTCACCCCAACAAATTAGATTTGAGGAAAAAGAGTTGAGTTCAGCAGATCAGGCCAAGAAATCAAAGGTTCTCTATAGACGTTGACGCTGCATCATGTCCAAATTATCTGCCAAGATCTGCTAAGCTTCTGTTCTATACAAATTCGTAACAAGCATTCATTTGGTTGTCCAAGCGCGTATTTCAACATGTACCAAATAGGTGCAGGATACTCCAAACTTTATTCCAAGCATTTACTTCATTAGGAATAAAATAAAAGAGAATTTAGAACAAAATCATTTTCGTAAAAAGGCAGTGTGAGATCCTACATCGATTGAGGAGGAGAACGGAACACCGTTTATAAGAGTGTAGAAACCTCTCCATCGTAGATGCGTCTTAAAAAACTTGGAGGGAAAGCCCAAAAAAAAAATATATCGGCTAGCGGTGAGCTTTGGCAGTTACAGGCAGGTTCATAGAAATTATATTAAGTGGAAAATTACAAGCACCTCTCATGGATTTTGGCCCAAAGACAGTGAAGAAATAAGAAAGGGCATTGAAAGAGAGGTTATATCCCTTTCCTAAGTTTCTAAGGAAATCCACAGCGTAACGTTTCTGTTCTTTCCATGTCTTGCTGGAAACAGTTGCATCAAAAAGTAATTTTTGTACGTCAATCAATGCAAAGCTTAGTGAGCTCTAAGAAATGGGCGTCAATAAGATTGTTGAACTAGAAAATAGTAACATTCTCTAATTTATTGGCAAAAATGAGTATCAGTACCATGCTCATGACTTCTGAGAAAAGCACGTCAATAGCCAAAAAATATATTGGAGATTTATTACTTACTTCCCCACGATATGTCCCCATTATCAAACTTGGTAGCAAGAGCTCTTATCCAGGCTCTATCTTTGTCACTAAATGCATAACTTAAACTTGAAGCCACCAATATGAACCCTCCAATCTTTTCCATCTCATTGCCACTTTGGTTTAGATTTTGAGCCACTGGCTGTACCAAAACTGAGCGAGTGCCCTTAGATAGCATTTGCCAAAGTCCAGATTCTGAAAAAGTTGTGAAAACCATGATTTTGAAAGGTTTCATAGAACATCATAGCATTTGTTTAACTATTACTATCAATGCATGTTTCATCGAAGAAACAACCAGTAGAAACACCTCAACACCATAAGGAAAAGAAACCAATATGACATTGCAGATTTCTTCAAATATTGATAGCGGTTGATTATCAAAACGTAAGTCCTTTAGAGTACTAGTCATTCCTATGCTCTCTAAGCCCCCTTTACGTTCTTCTATGTAAAAGTTCAAAGTTAGAACTACTTCCCTTCAACCTATTTTTCTAATTATTCCATTGATGAGCATAAGCGATTTTTAAGGAGATAACATTTTCTCCACTAATTATGGTCGTTCTAAGACATTATTCCATGTGCGGCAAGAGAGCAAAAGAGACCATAAAAAATGGAATCATATACCTGAAATCTGAGGAAAATAGAGGGAATCATTTAATGCAGATAGGCCAATGCTCTGAAGCTGCTCCTCAAACCAGGCAAGTAAATCTGCTCCTGATATATCATTTGGACTATTCCAGTATCCTCGAACGCATAACTCCCCTTGAATCAGTATTAACTGATTCCAAAGATAAATGCAAAAATTACAATTTAGAGAGTGTCAAGGGAAGCTAAATAATTTAATCTTTTGAACACAGCGTGTTCTCTAACAACAAAAATTGGTGAGATACTATACCACTGATATACTGTTTGTATTGCGCAGCAAGATGTATGTTGCCCAAGCCAAGTCATCCTTCACATTATCCGATACATTTTGTGACAAAACAAATATTTGCTCAGCCCCTTCAGGGAGGGTAGCTTCGCCAGATGGAACTGCACCCTGCAAGCAAAAGTCCCAATGCTTCAACTAGACATCAACAAGGTGCCTGATGAAGTTACTCTAATACGCAAGCCAGCAACTCATGGAATGGTATGATGCTAGAATGTAGAACAAAAAAGTGATAATGGCTTCGTCGACAATGTGAGAACATCTTATATAAGGAGGTGGTGAGACTTCTTTTTTTTGTATGGTCTTAGCAAATATTTGAGATCCACATTGGTTGGAGAGGAGAATTGTTGAAACCGAATGGGATAGATTGTGAGATCCCACGTCGGTTGGAGAGTAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCACACCTTTTTAAAAACCTCGAGGGGAAGCCCGAAAGAAAAAGCCCAAAAAGAACAATATTTGCTAGCGGATAGAGACGGAAGGCTAGATAAAGAGATCTGAGGTGACATTTGAGCCAAATTGAATTAACAATAACAAGACATTAGAAAAGAAATTTACGCAAGATAGAGGACGAATAAGAGAGCTTCACTCTTCAAGAAGATTCCGAGATGAACGCTACACATAGAATGTCTAGAAAACCATCAGGGTTAGAATGACAATCTTATTCAAATTCAAGGGAGGTTGGATCAACTTTGGGAAGAGTTGGATTGAACAGGTGAAGCATCTTTGAACTTATTAGATAGGATTTTCATTAGGCATCCACCCAACCGAAATCGATCACCTGGACAATTAGACATCCTACCCGTAATCGCAACGACCCAACTGCAAGAGTGGAGATCTACCAACTGAGCTATATCCCCCGAGCAAAGTGGAGCCTGAATGAAGGAGTTAGATGCCCATCCGGTTCTTAAGGGATACAATTTTATTCTACAAATCCGGTCACATAAAAGTTCATCTCAATCTAATCAGGACACTTTGATAGCAAAGCTTTCAGTAGGCTCTCCAGTCATCGTTAAGGTCATTCTCTTTTAACAAGATCCATCAAATATATATACCCCCCCGTCCCAGTCTCTTATTTTCCATCACAATCCCTACTTGATCTTTAAGTACTACACGAGCCAGCAGTTTCAAGTCCCTCGAATTCTCCTTTTTCCACACTCTTACAGAGATTAACGGAAGTTTCCCAGCAAGTAGAAGAAGAACATTAAAAAAATAACTGTATAATCAGGTCAACAATGTAATATCTCGTATGTTACCTCAAGAAACTTTCCCAAGTAGGGGAGTGCAATAGAAAATGCAGCCAAGGAAATGCCTAAAGCCTCAGTTCTCTACCAAAAAAAAAACACATCAAATAACAGAAATAATGAAAGCCCCAACAAGAACCTAAAAGCAAAGGCGTTCCCAGAAAACTGTGATTGCTTACTAACTGTGCTGAGGTGATGGGAGCAGCTGAACTCGAACCAACAAAGTGATTCAAAAGCAGAAGCGAGCCAAATCCATAACCAATCCATCTGGGTAAGTAAGACTCATCCAATCCAGGAATCCCTAAACCCATTCGAAAGAAATGTTATCAAATTCCTTCAGAAATTACCCATTTACAACAGAGGAAGAAAAAGAGATACCAAGTGTGAAGCGAAGAACAGAGAGATTGAGTTGGCGATTGGGCGAGTTCTTAGAATCGTCAAGACGAGCAGTAATCACTGGACTCTTCGACCCGTTTTTAGCGCGAAATCGGGGAGTGGATGA

mRNA sequence

GCTTATCTTCTTTGGGAAATTAGAGAAGAAACAGAGCTTTGAAACCGACAACAATGGCGGCCCTGGCTTGCTCATTCCCTTTACAGTGTCTAAAAACTCAGAGAAAAAGCAACCCACAATCACATCTTGAATTCGCTTCTCTTCGGAGTAATATCAAGTCAAAGGAAACAGGAGTTGTTGATTTTACCGAACCTTCTAAAGTATATGAGAACGTGAAGCAGGCAACTTCATTTGGTTTGAGAAGTGAGGATGTGCCATCTTCAGATGCATCTCAAATAGCTAACAACCTCTCAAACTTGGGCCAGAACTGCAACAGAGAAGATATTTCAACCGGAGACTGGGAGGGTAGCTTCGCCAGATGGAACTGCACCCTGCAAGCAAAAGTCCCAATGCTTCAACTAGACATCAACAAGGTGCCTGATGAAGTTACTCTAATACGCAAGCCAGCAACTCATGGAATGGCATCCACCCAACCGAAATCGATCACCTGGACAATTAGACATCCTACCCGTAATCGCAACGACCCAACTGCAAGAGTGGAGATCTACCAACTGAGCTATATCCCCCGAGCAAAGTGGAGCCTGAATGAAGGACTGAACTCGAACCAACAAAGTGATTCAAAAGCAGAAGCGAGCCAAATCCATAACCAATCCATCTGGGTAAGTAAGACTCATCCAATCCAGGAATCCCTAAACCCATTCGAAAGAAATGTTATCAAATTCCTTCAGAAATTACCCATTTACAACAGAGGAAGAAAAAGAGATACCAAGTGTGAAGCGAAGAACAGAGAGATTGAGTTGGCGATTGGGCGAGTTCTTAGAATCGTCAAGACGAGCAGTAATCACTGGACTCTTCGACCCGTTTTTAGCGCGAAATCGGGGAGTGGATGA

Coding sequence (CDS)

ATGGCGGCCCTGGCTTGCTCATTCCCTTTACAGTGTCTAAAAACTCAGAGAAAAAGCAACCCACAATCACATCTTGAATTCGCTTCTCTTCGGAGTAATATCAAGTCAAAGGAAACAGGAGTTGTTGATTTTACCGAACCTTCTAAAGTATATGAGAACGTGAAGCAGGCAACTTCATTTGGTTTGAGAAGTGAGGATGTGCCATCTTCAGATGCATCTCAAATAGCTAACAACCTCTCAAACTTGGGCCAGAACTGCAACAGAGAAGATATTTCAACCGGAGACTGGGAGGGTAGCTTCGCCAGATGGAACTGCACCCTGCAAGCAAAAGTCCCAATGCTTCAACTAGACATCAACAAGGTGCCTGATGAAGTTACTCTAATACGCAAGCCAGCAACTCATGGAATGGCATCCACCCAACCGAAATCGATCACCTGGACAATTAGACATCCTACCCGTAATCGCAACGACCCAACTGCAAGAGTGGAGATCTACCAACTGAGCTATATCCCCCGAGCAAAGTGGAGCCTGAATGAAGGACTGAACTCGAACCAACAAAGTGATTCAAAAGCAGAAGCGAGCCAAATCCATAACCAATCCATCTGGGTAAGTAAGACTCATCCAATCCAGGAATCCCTAAACCCATTCGAAAGAAATGTTATCAAATTCCTTCAGAAATTACCCATTTACAACAGAGGAAGAAAAAGAGATACCAAGTGTGAAGCGAAGAACAGAGAGATTGAGTTGGCGATTGGGCGAGTTCTTAGAATCGTCAAGACGAGCAGTAATCACTGGACTCTTCGACCCGTTTTTAGCGCGAAATCGGGGAGTGGATGA

Protein sequence

MAALACSFPLQCLKTQRKSNPQSHLEFASLRSNIKSKETGVVDFTEPSKVYENVKQATSFGLRSEDVPSSDASQIANNLSNLGQNCNREDISTGDWEGSFARWNCTLQAKVPMLQLDINKVPDEVTLIRKPATHGMASTQPKSITWTIRHPTRNRNDPTARVEIYQLSYIPRAKWSLNEGLNSNQQSDSKAEASQIHNQSIWVSKTHPIQESLNPFERNVIKFLQKLPIYNRGRKRDTKCEAKNREIELAIGRVLRIVKTSSNHWTLRPVFSAKSGSG
Homology
[Close]
BLAST of CmaCh18G012230 vs. TrEMBL
Match: I3SYW1_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.5e-07
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1 

Query: 146 WTIRHPTRNRNDPTARVEIYQLSYI-PRAKWSLNEGLNS 184
           WTIRHPTRNRNDP AR E+YQLSYI P   WS++EG+ S
Sbjct: 26  WTIRHPTRNRNDPIARAELYQLSYIPPEPSWSMHEGVKS 64

[Close]
BLAST of CmaCh18G012230 vs. TrEMBL
Match: G7J0Z8_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g035630 PE=4 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 4.5e-07
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1 

Query: 146 WTIRHPTRNRNDPTARVEIYQLSYI-PRAKWSLNEGLNS 184
           WTIRHPTRNRNDP AR E+YQLSYI P   WS++EG+ S
Sbjct: 99  WTIRHPTRNRNDPIARAELYQLSYIPPEPSWSMHEGVKS 137

[Close]
BLAST of CmaCh18G012230 vs. TrEMBL
Match: A0A0P0VSI0_ORYSJ (Os03g0117000 protein OS=Oryza sativa subsp. japonica GN=Os03g0117000 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 1 

Query: 30  LRSNIKSKETGVV-DFTEPSKVYENVKQATSFGLR-----------------------SE 89
           L S  +S+ TGVV DF+EPS VY+NVKQA +FGL                        S 
Sbjct: 129 LGSIAQSRATGVVVDFSEPSTVYDNVKQAAAFGLNSVVYVPNIELDTVTELSAFCEKASM 188

Query: 90  DVPSSDASQIANNLSNLGQNCNREDI 92
           D+PS DA QIANN+S+LGQ  NRED+
Sbjct: 189 DLPSQDAIQIANNISDLGQIYNREDL 214

[Close]
BLAST of CmaCh18G012230 vs. TrEMBL
Match: G7K1Z1_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_5g080920 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 1 

Query: 127 LIRKPATHGMASTQPKSIT-WTIRHPTRNRNDPTARVEIYQLSYIPRAK 175
           L+RK  +  +   Q   IT W IRHPTRNRNDP ARVE+YQLSYIPRAK
Sbjct: 75  LLRK--SEPLVQVQDTIITAWIIRHPTRNRNDPIARVELYQLSYIPRAK 121

[Close]
BLAST of CmaCh18G012230 vs. NCBI nr
Match: gi|388514783|gb|AFK45453.1| (unknown [Medicago truncatula])

HSP 1 Score: 63.5 bits (153), Expect = 6.5e-07
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1 

Query: 146 WTIRHPTRNRNDPTARVEIYQLSYI-PRAKWSLNEGLNS 184
           WTIRHPTRNRNDP AR E+YQLSYI P   WS++EG+ S
Sbjct: 26  WTIRHPTRNRNDPIARAELYQLSYIPPEPSWSMHEGVKS 64

[Close]
BLAST of CmaCh18G012230 vs. NCBI nr
Match: gi|922374974|ref|XP_003599575.2| (hypothetical protein MTR_3g035630 [Medicago truncatula])

HSP 1 Score: 63.5 bits (153), Expect = 6.5e-07
Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1 

Query: 146 WTIRHPTRNRNDPTARVEIYQLSYI-PRAKWSLNEGLNS 184
           WTIRHPTRNRNDP AR E+YQLSYI P   WS++EG+ S
Sbjct: 99  WTIRHPTRNRNDPIARAELYQLSYIPPEPSWSMHEGVKS 137

[Close]
BLAST of CmaCh18G012230 vs. NCBI nr
Match: gi|937907066|dbj|BAS81986.1| (Os03g0117000 [Oryza sativa Japonica Group])

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06
Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 1 

Query: 30  LRSNIKSKETGVV-DFTEPSKVYENVKQATSFGLR-----------------------SE 89
           L S  +S+ TGVV DF+EPS VY+NVKQA +FGL                        S 
Sbjct: 129 LGSIAQSRATGVVVDFSEPSTVYDNVKQAAAFGLNSVVYVPNIELDTVTELSAFCEKASM 188

Query: 90  DVPSSDASQIANNLSNLGQNCNREDI 92
           D+PS DA QIANN+S+LGQ  NRED+
Sbjct: 189 DLPSQDAIQIANNISDLGQIYNREDL 214

[Close]
BLAST of CmaCh18G012230 vs. NCBI nr
Match: gi|357492395|ref|XP_003616486.1| (hypothetical protein MTR_5g080920 [Medicago truncatula])

HSP 1 Score: 60.8 bits (146), Expect = 4.2e-06
Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 1 

Query: 127 LIRKPATHGMASTQPKSIT-WTIRHPTRNRNDPTARVEIYQLSYIPRAK 175
           L+RK  +  +   Q   IT W IRHPTRNRNDP ARVE+YQLSYIPRAK
Sbjct: 75  LLRK--SEPLVQVQDTIITAWIIRHPTRNRNDPIARVELYQLSYIPRAK 121

The following BLAST results are available for this feature:
BLAST of CmaCh18G012230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh18G012230 vs. TrEMBL
Match NameE-valueIdentityDescription
I3SYW1_MEDTR4.5e-0771.79Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
G7J0Z8_MEDTR4.5e-0771.79Uncharacterized protein OS=Medicago truncatula GN=MTR_3g035630 PE=4 SV=2[more]
A0A0P0VSI0_ORYSJ1.0e-0647.67Os03g0117000 protein OS=Oryza sativa subsp. japonica GN=Os03g0117000 PE=4 SV=1[more]
G7K1Z1_MEDTR2.9e-0665.31Uncharacterized protein OS=Medicago truncatula GN=MTR_5g080920 PE=4 SV=1[more]
BLAST of CmaCh18G012230 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh18G012230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|388514783|gb|AFK45453.1|6.5e-0771.79unknown [Medicago truncatula][more]
gi|922374974|ref|XP_003599575.2|6.5e-0771.79hypothetical protein MTR_3g035630 [Medicago truncatula][more]
gi|937907066|dbj|BAS81986.1|1.5e-0647.67Os03g0117000 [Oryza sativa Japonica Group][more]
gi|357492395|ref|XP_003616486.1|4.2e-0665.31hypothetical protein MTR_5g080920 [Medicago truncatula][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G012230.1CmaCh18G012230.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh18G012230CmoCh18G012440Cucurbita moschata (Rifu)cmacmoB406
CmaCh18G012230Cp4.1LG09g01160Cucurbita pepo (Zucchini)cmacpeB415
CmaCh18G012230Carg26819Silver-seed gourdcarcmaB0011
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh18G012230Melon (DHL92) v3.6.1cmamedB407
CmaCh18G012230Melon (DHL92) v3.6.1cmamedB432
CmaCh18G012230Silver-seed gourdcarcmaB0996
CmaCh18G012230Silver-seed gourdcarcmaB1208
CmaCh18G012230Cucumber (Chinese Long) v3cmacucB0502
CmaCh18G012230Cucumber (Chinese Long) v3cmacucB0487
CmaCh18G012230Watermelon (97103) v2cmawmbB403
CmaCh18G012230Watermelon (97103) v2cmawmbB424
CmaCh18G012230Wax gourdcmawgoB0507
CmaCh18G012230Cucurbita maxima (Rimu)cmacmaB338
CmaCh18G012230Cucurbita maxima (Rimu)cmacmaB396
CmaCh18G012230Cucumber (Gy14) v1cgycmaB0716
CmaCh18G012230Cucurbita moschata (Rifu)cmacmoB405
CmaCh18G012230Cucurbita moschata (Rifu)cmacmoB416
CmaCh18G012230Wild cucumber (PI 183967)cmacpiB413
CmaCh18G012230Cucumber (Chinese Long) v2cmacuB408
CmaCh18G012230Cucumber (Chinese Long) v2cmacuB420
CmaCh18G012230Melon (DHL92) v3.5.1cmameB375
CmaCh18G012230Watermelon (Charleston Gray)cmawcgB352
CmaCh18G012230Watermelon (Charleston Gray)cmawcgB365
CmaCh18G012230Watermelon (97103) v1cmawmB373
CmaCh18G012230Cucurbita pepo (Zucchini)cmacpeB425
CmaCh18G012230Cucurbita pepo (Zucchini)cmacpeB453
CmaCh18G012230Bottle gourd (USVL1VR-Ls)cmalsiB365
CmaCh18G012230Bottle gourd (USVL1VR-Ls)cmalsiB387
CmaCh18G012230Cucumber (Gy14) v2cgybcmaB352
CmaCh18G012230Cucumber (Gy14) v2cgybcmaB630