Cp4.1LG08g08850 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGGCCGAGGAAACTCATCATCTTGGGCCCGAAGTGGGCTCGAGTTTTCTTCTGCAGCGATGATCCGAACTGTTTCGGTCTTGCTTCTTGGTTAGCCGATTGACGAAGCCGAAATTCGATACTTGGCGAGCACAAAGCACGATTTTATTGGCAACCAATCCAAAGATCTTCTTGTTTTCGCGATTGATTACAGGTACAATTTAAGTTTCTTTTTCTGTCTCTAAATTTCCTTTTTGCGTCCACCGATTGATCTAAATATCGTAACACACTGATGGAAAATTATGATTACACTGCGCTTGAGGAGAGTTTTGAAAGATTTTTGTATATCTGCATTGGATACGCGAGATTCTGTGGAAAAATTCAATTCCAGTTTGGAGTTTTTGATTCTCAGTTTTTTTGGCTTCTTTTACTCTGAATCAAGCATGAATTATTCCGAAAATGGCTGGATATGTTTAGTTCTATTATTCCAAACTTTTCAAGGACGATAATTTTAGCTACCAAATCGTGTTTTGCTTGCGCGTCGAGCGGCAATCTGTTATCAAGCATTAGATCGTAGATAATGATCATCTTGCAAAGTTTGGGATTACTTTAGGATCATTAATGTGATTTTAACCCGTTAAAATACTTGTAAATACTTAAAATCGTTCCAGACTCACTTGAAGTCATCATCTTTGTTTGGTTTCGCTTCATTCTATTTCATATGCCATTTTCCTTTAGGCAATAGTATGCTAGTTATGAAGTTGTTCGGTATTTCTTCAACAAATTTGCTTGTTCAAGTCGATGCACAAAAGGTGCCTTATCACGAATCTCTTATCATCCAAGATATTTCCAGTACTATGGGTCCTTTCAGTATGGTACTTTATGCTTCTGAAGTTATCATGCCATATGCTGTCTTGTAGCTATAGCTTCACCATACCAATTTTACCTTACAGTTCGATCTGATTCTTGAAAACACGGAAACTTGATTCTACTTTGACATGCTTATTTCCAATCATAATCAACAACAGGAAAAAAATTTAGGAAACTTTATACTAGCTATGGAATGCAAGGCTCGTCTTAGTTTGCAAGTCTCTAGTCTCATTGAACCATTTACACCACTAAAATAGTTATGCATCAATGGAAAGTGGTTAGGCCTGTCATGTTTATGAATCTCTGCGTTAATTTATCTCTTTATGTTATTGATATTGTGCTAAGTTTCTTCCCACCCATCTGAAATTTCTCAGTTATAGAGAGAAATGCATCCATAGGACTCATTTTCAGAGAGCGCAATAGAGAAAATGCAGAAATTGGGAGATTTCAAGCTACCACATTTCTTCAATTACCCTCCATATTTCACGTAATTTCCTTTTCCTGTTTCAGTTACCATGGTTTTTTACATGTTTATTTGCTTAACCAAGTAACTTGGAAGTTGCGAGTCAATTTCTGAAGATGTTGATCTCTTGGTTTTGATTGCTTTTCCCTGAGTGAATAAAACCAACACTTCATTGCTCAGCCAGTAGTTATGCAACAATAACAGGGTTCTGGATCACTTATGCTTCTCCGTTTGCCTCATAAGAATGAATCTGATAATTTTTTTTTCCATAAAAAATGAATTTGGTAATTCTACCTTGCTGCAATTCTGAAATTGTTATTGATAACTTCGACTGTTTCACTTTATATCAAGCTTGTCATGTCTTAAGTTTCACTTATAATCTTGTATTGCATGTCTTATCAGTTTGCAACCGGTGAAGGACACCCGTGAGAAGCAAATTCAACTTTGGAAGGAACTTATTCTCGACTACTGCCGAACACAAAAGATATTTGTCATTGGACTCGAGGAGGAATTTCCTCTATTTTCAAATTCTGTCATTGAGAGTAAATTCCTGAACTTGTTTGGTCCTCATTGACCGTTAAGACTTTTGGTACATGCATTAATATCAACGCTAATGAAGTCATTCACAGTTGCATCATGAACAGTGTGAAAAACATTAAGATATTGGCTTCATTATATGAAACCTTTTCATTCTATGGAGCATAGTACATTGGACTTGGTGTTTAGAACTCTCAGTCATGGATCTATGTTCTACTATTCAGTTGTTTGATGTATTTTACAGTGTGGTTGTGATGCTACAGGATCTCTCAGTCATGAAGCTAGAGTAGTTTTTCTCTCTGCCTTAGTTTCAGATGGTTAGTCCGTTCTAGTTTTGTTCTATCATTATATTTGTTTACAGTTTCCATTTATTCCCAAAACTGATAAATTGTTACTTTAATTGTCCAATAGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGTCTTATTTTGTGGCACCGGATTCAAGATTGGGCTGACATCATTTTGCACTTTGTAAGACTAAATACTTTGTTAACTCTCATAGTTATGTTAAAGTTGATTGGTTTAGGGTGGAGTTTGGAATGATTTTTGAAAGGGTAATAAATGCTATTATCCTATTAAAGCTGTTTTCAAAGTATTCTAGTCTTCTGGTTGCATTTGGATTTGATTAGGAGGAAATTTTAACATTCTTTAATGTTGACTGATTATAAATTAAGCTAAAGAAAATACCTTTTCAGTTGTGTTGGTTTGTAAAATTTTGTTAAGCGCATCTTTTGACTTCTCAAAGAGTTTGATGCCTCTACTGACGAACTCTTGAAAATCCTTTTTACCCATATTTTTCCACATTTCCACACTTATTTACTTTATATTACAACTGATTTTTTTTAATAAAGAAATTAAAACAATTATTTCAAAAACTACAACAATTATTTTAAAGAAGGACAACATTCTCAAATTGAGCCTGTTTGGAAAGATTGTTCGAGTAATTATGAACATTTTTGTAACACTTAAAATCCAAATCATTCCAAACAAACTCTATTCCAGGGGTGCTTTGAAAAATTCTTATGCAATTGCCTTATTAAATAGGTGAAAAACAATGGACTTGAAGATAGTGTTATGACAGTTGAGGAAATACGTTCAGGAGTTGAGTCCAGAGGAACAGGTACTTTCCTTGCTTCTACTGAGGCGATTTAGATCTTCCAATGATTTCTAAATCTATTTTTAATTTGCTACATTGATATTCGTATTAAAGCAACTCTAGTTGGCTATCCCTCAGGTGTTATTTTGTTTAATTGGAGCCTGATTTTATTTTAGTTTGGCTTCTTTTGTTTGGGGTTAATTTCTTCTTGTACCTTCTTGCATTTTTTAATACTTTTTCTCAATGAAAGTTCACTTCCCTCAAAAAGTAAAAAGAAAAAAAGGGGGGAAAAAGATGATGGAAAACATCTTGGTGCTTAATAAATCCAAGAAACTTGGCTCAAGGGGAAATGTAACACTGGCAAAACTGATATGAACAATTAGTTGGGGCGTAGGTCCTANAATTTTACTTCCCCACCTAGCTACTCTAGGTTGGGGCGTAGGTCCTGGTGGGGAAGTTATAGACACCTTTCCGTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTATTGGGTTTTGGCGGTATTTATCATGCACTTCTGGGACCCGAGACCCTTGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTATAGGTGCTTTTCTTCTAGTATTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCTCCGGGGGGGGGAGATGTAAGAAAAATTACCAACTTGACCCTTAGCCCAAGTGTTATATTTGGTTATTTACTAAAATCTCCTTTTGGGGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAGTTGGGGGGCATGTATGGTTAGGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCGTTTGCATGGGCTCGCCGCGCACTTGTATGGTCTGGTTTAGTTTAAGTCTCATTTTATTTGTAAACTTTTAAACCTGTCAACTTAAGATATACCGGAGCCATTAATATAGATAACTTTCTCCTTACATTCATATTCAAAAGAAAAACAAAAAGGTATTGAAGATAGAAGTTTAATAACTCAGATCACTTACTTTTTATGGGCAAACAAATTAGTTACGTAGATGAGAGTCAGAAAATCATTATTTGAATAAGAAGGAATGTCAGGGAATAGAATCAAAGGTTCTGGAATTGTACTAGTTTTTGCTTTCATTTCCTCTCTAGTGTAAAAGAATATCTGATTCTGGTTCTGGAAGCCACACACAAGAAAGAAACTTTTCTTATATTTGTAAATGTCTACTTTGGTTTCTTTGGTCCTTGCCGATCGATAGATTATATTTAACAAATTTGATGCCAAATGAAGTGGATGAGACTCGAAGCATGAACTTAACTCATGCTGAGTCATGTAAGAGTTTGGTTAAATTCTCTAAAAAGGTTCATAGTAAAGACAAATAATCTTTTACACAAAATTCATGAATCAAATAGGATTATGCTTTTGATACTTGCATTACTAAATGTTTACATCCTTTAATCACATTGAAGCCTTATTTGTGCAAACCAATACGTTTATTTTTCAGAGCTTCAAGGGATTGACCGTACGATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGAAAGCTTGCAATTTTCAAGGGTTCTTCAACAGACGATGAAGGCATTAAATTCTCTGTATGACTCCAAAATCGAACGGCCTCAATGTGAATTTTCCAGTTCAATCTTCTTCTAAATGATACTCATCTGTAGTTTCCCTGCCTATTCAAACTGGGATTGTGAAGAGTTCTTCTTGCCAAAGTTTTGGTGCAGCATTTCAGTGTAGTAATGTAACCAATAAGTAAAGAGCCTTCAAGTAGAACTCAAGAAACTATGCTTGGAAGTGCTTTGGAAGGATATGGTATTTTGTGTAGCCTTTTGAAGTTCTTTTAAATGTATTTTTATTATCAGTTGGAATGATTTGAATAGTAACAAGATTAGAAGTGGGAATTGGGGAACTGTAATTCTGCTAAGTAAATGGTTATATCAATTATTTTATCCTAAAAAATTGATTTATTTGGATTTTGTTTTGTAGTTATTTGATTTTTTATTTTTAAAAAATATTGCTTGT AGAGGCCGAGGAAACTCATCATCTTGGGCCCGAAGTGGGCTCGAGTTTTCTTCTGCAGCGATGATCCGAACTGTTTCGGTCTTGCTTCTTGGTTAGCCGATTGACGAAGCCGAAATTCGATACTTGGCGAGCACAAAGCACGATTTTATTGGCAACCAATCCAAAGATCTTCTTGTTTTCGCGATTGATTACAGTTATAGAGAGAAATGCATCCATAGGACTCATTTTCAGAGAGCGCAATAGAGAAAATGCAGAAATTGGGAGATTTCAAGCTACCACATTTCTTCAATTACCCTCCATATTTCACTTTGCAACCGGTGAAGGACACCCGTGAGAAGCAAATTCAACTTTGGAAGGAACTTATTCTCGACTACTGCCGAACACAAAAGATATTTGTCATTGGACTCGAGGAGGAATTTCCTCTATTTTCAAATTCTGTCATTGAGAGATCTCTCAGTCATGAAGCTAGAGTAGTTTTTCTCTCTGCCTTAGTTTCAGATGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGTCTTATTTTGTGGCACCGGATTCAAGATTGGGCTGACATCATTTTGCACTTTGTGAAAAACAATGGACTTGAAGATAGTGTTATGACAGTTGAGGAAATACGTTCAGGAGTTGAGTCCAGAGGAACAGAGCTTCAAGGGATTGACCGTACGATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGAAAGCTTGCAATTTTCAAGGGTTCTTCAACAGACGATGAAGGCATTAAATTCTCTGTATGACTCCAAAATCGAACGGCCTCAATGTGAATTTTCCAGTTCAATCTTCTTCTAAATGATACTCATCTGTAGTTTCCCTGCCTATTCAAACTGGGATTGTGAAGAGTTCTTCTTGCCAAAGTTTTGGTGCAGCATTTCAGTGTAGTAATGTAACCAATAAGTAAAGAGCCTTCAAGTAGAACTCAAGAAACTATGCTTGGAAGTGCTTTGGAAGGATATGGTATTTTGTGTAGCCTTTTGAAGTTCTTTTAAATGTATTTTTATTATCAGTTGGAATGATTTGAATAGTAACAAGATTAGAAGTGGGAATTGGGGAACTGTAATTCTGCTAAGTAAATGGTTATATCAATTATTTTATCCTAAAAAATTGATTTATTTGGATTTTGTTTTGTAGTTATTTGATTTTTTATTTTTAAAAAATATTGCTTGT ATGCAGAAATTGGGAGATTTCAAGCTACCACATTTCTTCAATTACCCTCCATATTTCACTTTGCAACCGGTGAAGGACACCCGTGAGAAGCAAATTCAACTTTGGAAGGAACTTATTCTCGACTACTGCCGAACACAAAAGATATTTGTCATTGGACTCGAGGAGGAATTTCCTCTATTTTCAAATTCTGTCATTGAGAGATCTCTCAGTCATGAAGCTAGAGTAGTTTTTCTCTCTGCCTTAGTTTCAGATGGTCGTGCAGAATGGCTGGATAAGGGACATAGGAAATGTCTTATTTTGTGGCACCGGATTCAAGATTGGGCTGACATCATTTTGCACTTTGTGAAAAACAATGGACTTGAAGATAGTGTTATGACAGTTGAGGAAATACGTTCAGGAGTTGAGTCCAGAGGAACAGAGCTTCAAGGGATTGACCGTACGATTTTAATGAGAGCATTGAAGCAACTTGAACAGAAGGGAAAGCTTGCAATTTTCAAGGGTTCTTCAACAGACGATGAAGGCATTAAATTCTCTGTATGA MQKLGDFKLPHFFNYPPYFTLQPVKDTREKQIQLWKELILDYCRTQKIFVIGLEEEFPLFSNSVIERSLSHEARVVFLSALVSDGRAEWLDKGHRKCLILWHRIQDWADIILHFVKNNGLEDSVMTVEEIRSGVESRGTELQGIDRTILMRALKQLEQKGKLAIFKGSSTDDEGIKFSV
BLAST of Cp4.1LG08g08850 vs. Swiss-Prot
Match: VPS25_ARATH (Vacuolar protein sorting-associated protein 25 OS=Arabidopsis thaliana GN=VPS25 PE=1 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 2.4e-87 Identity = 152/179 (84.92%), Postives = 167/179 (93.30%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. Swiss-Prot
Match: VPS25_XENLA (Vacuolar protein-sorting-associated protein 25 OS=Xenopus laevis GN=vps25 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.8e-34 Identity = 71/173 (41.04%), Postives = 106/173 (61.27%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. Swiss-Prot
Match: VPS25_DANRE (Vacuolar protein-sorting-associated protein 25 OS=Danio rerio GN=vps25 PE=2 SV=2) HSP 1 Score: 143.7 bits (361), Expect = 2.0e-33 Identity = 70/173 (40.46%), Postives = 107/173 (61.85%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. Swiss-Prot
Match: VPS25_DICDI (Vacuolar protein-sorting-associated protein 25 OS=Dictyostelium discoideum GN=vps25 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.0e-30 Identity = 68/188 (36.17%), Postives = 113/188 (60.11%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. Swiss-Prot
Match: VPS25_MOUSE (Vacuolar protein-sorting-associated protein 25 OS=Mus musculus GN=Vps25 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29 Identity = 66/173 (38.15%), Postives = 100/173 (57.80%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. TrEMBL
Match: A0A0A0L1R7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G006740 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 6.3e-95 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. TrEMBL
Match: B9MU83_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01810g PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.2e-88 Identity = 159/179 (88.83%), Postives = 171/179 (95.53%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. TrEMBL
Match: A0A067JBX1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21748 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 2.0e-88 Identity = 159/179 (88.83%), Postives = 169/179 (94.41%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. TrEMBL
Match: A0A061G5Y1_THECC (E2F/DP family winged-helix DNA-binding domain isoform 1 OS=Theobroma cacao GN=TCM_016610 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 2.0e-88 Identity = 158/179 (88.27%), Postives = 170/179 (94.97%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. TrEMBL
Match: A0A0D2QMU3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G186000 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 9.8e-88 Identity = 157/179 (87.71%), Postives = 171/179 (95.53%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. TAIR10
Match: AT4G19003.2 (AT4G19003.2 E2F/DP family winged-helix DNA-binding domain) HSP 1 Score: 322.8 bits (826), Expect = 1.4e-88 Identity = 152/179 (84.92%), Postives = 167/179 (93.30%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: gi|659095525|ref|XP_008448627.1| (PREDICTED: vacuolar protein sorting-associated protein 25 isoform X1 [Cucumis melo]) HSP 1 Score: 356.7 bits (914), Expect = 2.4e-95 Identity = 174/179 (97.21%), Postives = 176/179 (98.32%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: gi|449456737|ref|XP_004146105.1| (PREDICTED: vacuolar protein sorting-associated protein 25 isoform X1 [Cucumis sativus]) HSP 1 Score: 354.8 bits (909), Expect = 9.1e-95 Identity = 172/179 (96.09%), Postives = 176/179 (98.32%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: gi|1009158488|ref|XP_015897317.1| (PREDICTED: vacuolar protein sorting-associated protein 25-like [Ziziphus jujuba]) HSP 1 Score: 339.7 bits (870), Expect = 3.0e-90 Identity = 163/179 (91.06%), Postives = 172/179 (96.09%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: gi|1009174401|ref|XP_015868328.1| (PREDICTED: vacuolar protein sorting-associated protein 25 [Ziziphus jujuba]) HSP 1 Score: 339.3 bits (869), Expect = 4.0e-90 Identity = 162/179 (90.50%), Postives = 172/179 (96.09%), Query Frame = 1
BLAST of Cp4.1LG08g08850 vs. NCBI nr
Match: gi|566146665|ref|XP_006368343.1| (hypothetical protein POPTR_0001s01810g [Populus trichocarpa]) HSP 1 Score: 334.0 bits (855), Expect = 1.7e-88 Identity = 159/179 (88.83%), Postives = 171/179 (95.53%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |