Cp4.1LG08g03160 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG08g03160
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG08 : 2230264 .. 2232281 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACGCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGATATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCGATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATTCGGCTGAAGTGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGAGAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCGTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGAAGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACCCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGATACTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGGTTTGAAGCTTTTTACTAGAATGATAAAGTTAGGTCCATGTCTCGATAAAGCTACATTTACGAGTGTTCTAACGATCTGTTCCAACCTGGAAGCTTTGCAGCTTGGTAGACAAGCACATGGACTTGTTATAAAAGCTGGATTCAGTGACATTGTTTCGGTTTCAAATGCTATGGTTACTATGTATGCAAGATGTGGGAACATGGATTGTGCTTTGATGGAGTTTCGTTCGATGTCGAGCAGGGATGTAATTTCTTGGAATTCTATTATCTGTGGGTTTGCTCACCATGGAAATGGAAAAGAAGCACTGGAAATGATTGAAAAAATGAGATTAGCTAACATAGAACCTAATCATATAACCTTTATTGGTGTTCTGTCTGCTTGTAGCCATAAGGGTCTAGTGGAACAAGGAAGGTACTATTTCAATTTGATGAAAAACGAATGTTCTATTCAGCCATTGAGCGAGCATTATACGTGCTTAGTTGATTTGTTCGGGCGATTCGGGCTTATTGACGAGGCACTGAGTTTTCTAGTTGAAATGAAAACGGAGGAAATCGAAGTTCCTCCGAGCGTTTGGGGGGCTTTGCTTGGAGCTTGCAGAATCCATAAGAATTATGATGTAGGGGTGATTGCAGGTGAAAAAGTTCTGGAGAAGGAGCCTCATAACTCTGGAGTGTATTTGATTTTAGCAGAAATGTATTTGGGAAGTGGGAAAAGAGAAGATGCTGAAAGGATTTTGGCAAGAATGAAGAACAATGGAGTTAAGAAACAACCAGGGTGTAGTTGGGTTGAGATAAACAATAGCGGACACGTCTTTCTTTCGGGAGATCGTTCGAACCCGCATTTTGATAGAATCTGTTGTGTTTTAAAGCTGTTGAATCTGGAGATGGAGTTGCAAACAACATAGTGATGAATAAAAATGCACGTCTAGATCAGTTTCATAGCTATGTCAGTGGAAAATTTCGCGAGCTGTTACTAGAACTTCATGCATTTCAAGTTTTCAAGTTCAAAACATCTGTAAGCTATGCTACGAACGAGGAACCTCTTGCCTTGTTGAGCATTTAG

mRNA sequence

ATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACGCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGATATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCGATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATTCGGCTGAAGTGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGAGAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCGTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGAAGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACCCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGATACTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGATCAGTTTCATAGCTATGTCAGTGGAAAATTTCGCGAGCTGTTACTAGAACTTCATGCATTTCAAGTTTTCAAGTTCAAAACATCTGTAAGCTATGCTACGAACGAGGAACCTCTTGCCTTGTTGAGCATTTAG

Coding sequence (CDS)

ATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACGCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGATATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCGATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATTCGGCTGAAGTGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGAGAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCGTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGAAGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACCCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGATACTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGATCAGTTTCATAGCTATGTCAGTGGAAAATTTCGCGAGCTGTTACTAGAACTTCATGCATTTCAAGTTTTCAAGTTCAAAACATCTGTAAGCTATGCTACGAACGAGGAACCTCTTGCCTTGTTGAGCATTTAG

Protein sequence

MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWNATIFGLGENDRGEEDQFHSYVSGKFRELLLELHAFQVFKFKTSVSYATNEEPLALLSI
BLAST of Cp4.1LG08g03160 vs. Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.2e-72
Identity = 126/296 (42.57%), Postives = 192/296 (64.86%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           +RNG  E A+KLFDEMP+R++V+WN MI+GY  N        LF  MPERD+ S+NT+++
Sbjct: 106 LRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLS 165

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           G  Q G VDDA+ +FD MP ++ VSWN++++ YV+N  +E+A  LF       ++SWN +
Sbjct: 166 GYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCL 225

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           +GG V   K+  A  +F  MN RD+VSW  +I+G A++G++++AR+LF+  P++D   W 
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
           AM++GYI+N  +E A ELF+KMPERN  SWN ++ G V  +R+E A+ LF  MP +   T
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQ 297
           WN ++  Y + G + E   + +K P  + VSW  +I GY   G    A+++F  ++
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

BLAST of Cp4.1LG08g03160 vs. Swiss-Prot
Match: PP185_ARATH (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 5.4e-62
Identity = 107/261 (41.00%), Postives = 174/261 (66.67%), Query Frame = 1

Query: 4   GLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPER-DIFSYNTVIAGL 63
           G + EA+KLFD +P+R+VVTW  +I GY   G   +   LF R+  R ++ ++  +++G 
Sbjct: 60  GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119

Query: 64  MQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIG 123
           ++   +  A+ +F  MP R+VVSWN+MI GY ++G ++KA++LFDEMP ++++SWN ++ 
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179

Query: 124 GLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWNAM 183
            LV  G++D A   F +M RRD+VSWT M+ GLA+ G+V++AR+LF+ MP ++  +WNAM
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239

Query: 184 MAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKTWN 243
           + GY +N +I+ A++LF+ MPER+F SWN ++ G + ++ +  A  LF  MPEK   +W 
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299

Query: 244 NIVLAYIRNGLVKETHGVLEK 264
            ++  Y+ N   +E   V  K
Sbjct: 300 TMITGYVENKENEEALNVFSK 320

BLAST of Cp4.1LG08g03160 vs. Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2)

HSP 1 Score: 224.2 bits (570), Expect = 2.3e-57
Identity = 103/306 (33.66%), Postives = 180/306 (58.82%), Query Frame = 1

Query: 2   RNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAG 61
           R G + EA+KLFD    +++ +WN+M+ GYF N    D   LF  MP+R+I S+N +++G
Sbjct: 29  RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSG 88

Query: 62  LMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLII 121
            M+ G++D+A+ +FD+MP R+VVSW +++ GYV NG                        
Sbjct: 89  YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG------------------------ 148

Query: 122 GGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWNA 181
                  K+D AE  F KM  ++ VSWT+M+ G  + GR++ A KL+E +P KD+ A  +
Sbjct: 149 -------KVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS 208

Query: 182 MMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKTW 241
           M+ G  + G+++ A E+F++M ER+  +W  +V G   + RV+DAR++F  MPEK + +W
Sbjct: 209 MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSW 268

Query: 242 NNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDAT 301
            ++++ Y++NG +++   + E  P   +++   +I G    GE+  A ++F+S+++++  
Sbjct: 269 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 303

Query: 302 IWNATI 308
            W   I
Sbjct: 329 SWQTVI 303

BLAST of Cp4.1LG08g03160 vs. Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-56
Identity = 105/254 (41.34%), Postives = 160/254 (62.99%), Query Frame = 1

Query: 3   NGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGL 62
           NGL +EA++LFDEM +RNVV+WN ++ GY  N    +  ++F  MPER++ S+  ++ G 
Sbjct: 61  NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGY 120

Query: 63  MQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIG 122
           MQ G V +A+ +F  MP R+ VSW  M  G + +G ++KA +L+D MP+KDV++   +IG
Sbjct: 121 MQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIG 180

Query: 123 GLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWNAM 182
           GL   G++D A + F +M  R++V+WT MI+G  +  RV+ ARKLFE MP K + +W +M
Sbjct: 181 GLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSM 240

Query: 183 MAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKTWN 242
           + GY  +G+IE AEE FE MP +   + N ++ G      +  ARR+F  M ++   TW 
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWR 300

Query: 243 NIVLAYIRNGLVKE 257
            ++ AY R G   E
Sbjct: 301 GMIKAYERKGFELE 314

BLAST of Cp4.1LG08g03160 vs. Swiss-Prot
Match: PPR88_ARATH (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-52
Identity = 104/337 (30.86%), Postives = 184/337 (54.60%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           +R+G + EA+ +F+++  RN VTWN MI GY      +    LF  MP+RD+ ++NT+I+
Sbjct: 51  IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMIS 110

Query: 61  GLMQCGDV---DDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISW 120
           G + CG +   ++A+ +FD MP RD  SWN+MI+GY +N  + +A+ LF++MP ++ +SW
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170

Query: 121 NLIIGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFEN----MPM 180
           + +I G    G++DSA V F KM  +D      +++GL +  R+ +A  +       +  
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSG 230

Query: 181 KDD--RAWNAMMAGYIENGQIEMAEELFEKMPE---------------RNFDSWNGLVNG 240
           ++D   A+N ++ GY + GQ+E A  LF+++P+               +N  SWN ++  
Sbjct: 231 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290

Query: 241 LVGSQRVEDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLI 300
            +    V  AR LF +M ++   +WN ++  Y+    +++   +  + P  +  SW  ++
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMV 350

Query: 301 VGYFGIGEVGIAVKIFESIQDKDATIWNATIFGLGEN 314
            GY  +G V +A   FE   +K    WN+ I    +N
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKN 387

BLAST of Cp4.1LG08g03160 vs. TrEMBL
Match: A0A0A0L9N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134600 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 4.6e-161
Identity = 270/318 (84.91%), Postives = 292/318 (91.82%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MRNGLVE+AQKLFD MPQRN+VTWNAMIRGYFLNG CSDGISLFRRMPERD+FSYNTVI 
Sbjct: 57  MRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIG 116

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQCGDVD AKDIFD+MPFRDVVSWNSMIAG +RNGLLE+AIQLFD MPLK+VISWNLI
Sbjct: 117 GLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLI 176

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           IGGLVNCGKLDSA  YFGKM+RRDLVSWTIMISGL RAGR+++AR LF NMP KD R WN
Sbjct: 177 IGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLDEARGLFNNMPTKDARVWN 236

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
           AMM GYIENG+IEMAEELF  MPERNF SWN LVNG VGSQRV+DAR+LFMEMP+KCQKT
Sbjct: 237 AMMVGYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFMEMPDKCQKT 296

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WNNIVLAYIRNGLV +TH +LEK PYGNI SWTNLIVGYFGIGEVG+AV+IFES+Q KD 
Sbjct: 297 WNNIVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESMQYKDT 356

Query: 301 TIWNATIFGLGENDRGEE 319
           T+WNATIFGLGEND+GEE
Sbjct: 357 TVWNATIFGLGENDKGEE 374

BLAST of Cp4.1LG08g03160 vs. TrEMBL
Match: M5XLA4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025358mg PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.8e-128
Identity = 209/318 (65.72%), Postives = 259/318 (81.45%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MR+G VEEAQKLFD+MP+RN VTWNAMIRGYFLNG   D I+LF RM ERD+FSYNT+I 
Sbjct: 45  MRDGFVEEAQKLFDKMPRRNTVTWNAMIRGYFLNGQFQDAINLFSRMTERDVFSYNTMIT 104

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQCGDVD A+++FD M +RDVV+WNSM++GY+RNG++ +A+ +FD MPLKDVISWNL+
Sbjct: 105 GLMQCGDVDGAREVFDRMIYRDVVTWNSMVSGYIRNGMIGEAVHVFDGMPLKDVISWNLV 164

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           +GGLVN G+ D AE YF +MN RDL SWTIMISG + AGRV +AR+LF+ M ++D +AWN
Sbjct: 165 VGGLVNSGEFDLAEKYFKRMNIRDLASWTIMISGFSSAGRVVEARELFDGMLVRDVQAWN 224

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
           AM+ GYIENG + +AE LF+KMPER+ +SW  +VNGLV  QR+ DA  LFMEMPEKC KT
Sbjct: 225 AMILGYIENGDVAIAEGLFQKMPERDLESWTLMVNGLVKVQRINDALELFMEMPEKCPKT 284

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WN+I+   +RNGL +E H  LEK PY ++VSWTN+IVGY GIGEVG A+++FES+  +D 
Sbjct: 285 WNSIIFKLVRNGLTREAHAFLEKNPYKDVVSWTNMIVGYLGIGEVGSAIELFESMLTRDT 344

Query: 301 TIWNATIFGLGENDRGEE 319
             WNATIFGL END GEE
Sbjct: 345 AAWNATIFGLSENDLGEE 362

BLAST of Cp4.1LG08g03160 vs. TrEMBL
Match: W9QY29_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004167 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.1e-127
Identity = 211/318 (66.35%), Postives = 264/318 (83.02%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MR+G V+EAQKLFD+MP+RN VTWNAMIRGYFLN    + I +F +MPERD+ SYNTVIA
Sbjct: 1   MRHGSVDEAQKLFDKMPERNTVTWNAMIRGYFLNRCADNAIEMFDKMPERDVISYNTVIA 60

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQCGDVD A  +F  M FRDVV+WNSM+AGY+RNG++ +A+++FD M LKDV+SWNL+
Sbjct: 61  GLMQCGDVDGAWRVFSGMGFRDVVTWNSMVAGYIRNGMVGEALRVFDGMLLKDVVSWNLV 120

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           IGGLV CG+ + AE YF +M  RD+VSWTIMISGLA AGR+ +AR+LF+NMP++D +AWN
Sbjct: 121 IGGLVRCGECNLAEKYFRRMITRDVVSWTIMISGLASAGRIVEARELFDNMPLRDTQAWN 180

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
           AMM GY++NG IE+A+ LF+KMP+R+FDSW  LVNGLV S R   A +LFMEMPEKCQKT
Sbjct: 181 AMMVGYMQNGYIEIAQALFQKMPKRDFDSWGELVNGLVKSGRANLAMKLFMEMPEKCQKT 240

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WN+I+L + RNGLVKE H  LEK+PY ++VSWTN+IVGYF IGEV  AV +F+ ++ +DA
Sbjct: 241 WNSILLEFTRNGLVKEAHTFLEKSPYSDVVSWTNIIVGYFEIGEVDNAVSVFDLMRSRDA 300

Query: 301 TIWNATIFGLGENDRGEE 319
           T +N TIFGLGEN+RGEE
Sbjct: 301 TAYNVTIFGLGENNRGEE 318

BLAST of Cp4.1LG08g03160 vs. TrEMBL
Match: A5BDH5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026574 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.0e-123
Identity = 206/318 (64.78%), Postives = 256/318 (80.50%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MRNG  EEAQ LFDEMPQRN VT+NAMIRGYF NG   +G+SLF  MPERDIFSYNT+IA
Sbjct: 206 MRNGFTEEAQMLFDEMPQRNTVTYNAMIRGYFQNGHFGEGVSLFDEMPERDIFSYNTMIA 265

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLM+ GD++ A +IF  MPFRDVVSWNSMI+GYV NGL+ +A+++F  M LKDV+SWNL+
Sbjct: 266 GLMKFGDINGASEIFQKMPFRDVVSWNSMISGYVSNGLIGEALRVFSGMVLKDVVSWNLV 325

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           I GLV  GK+D AE +F +M  RD+ SWT MISGLA AGR+ +AR LFE+MP++D RAWN
Sbjct: 326 IAGLVGVGKVDLAEEFFKEMGTRDIASWTTMISGLASAGRIVEARGLFEDMPVRDVRAWN 385

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
            M+AGY+ENG IE+ E LF+KMP+R+F SWN ++NGLV +QR+++A RLF+EMP+KC+++
Sbjct: 386 TMIAGYLENGCIEIGEVLFQKMPQRDFRSWNEMINGLVRNQRIQNAMRLFVEMPQKCRRS 445

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WN+IV   IRNGL+KE H  LEK+P+ + VSWTNLIVGYF  GEV  AV IFE +  +DA
Sbjct: 446 WNSIVFGLIRNGLIKEAHAFLEKSPFSDTVSWTNLIVGYFETGEVDTAVSIFELMPARDA 505

Query: 301 TIWNATIFGLGENDRGEE 319
           T WN  I+GLGEND GEE
Sbjct: 506 TAWNVIIWGLGENDHGEE 523

BLAST of Cp4.1LG08g03160 vs. TrEMBL
Match: V4U2W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006438mg PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 6.8e-120
Identity = 195/318 (61.32%), Postives = 250/318 (78.62%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MRN  ++EAQ LFDEMPQR+ VTWN MIRGYF NG+  + + LF +MPERD+F+YNTVIA
Sbjct: 53  MRNARIQEAQNLFDEMPQRDTVTWNVMIRGYFKNGFLDNAMYLFNQMPERDMFTYNTVIA 112

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQ  +V  AK++FD M  RDVV+WNSMI+GYV NGL+++A+++F  MPLKDV+SWNL+
Sbjct: 113 GLMQSDNVQGAKEVFDGMEVRDVVTWNSMISGYVCNGLIDEALRVFHGMPLKDVVSWNLV 172

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           IG LVNC ++D AE YF +M  RD+ SWTIM++GL R GR+ +ARKLF+ MP KD +AWN
Sbjct: 173 IGALVNCQRMDLAESYFKEMGARDVASWTIMVNGLVREGRIVEARKLFDKMPAKDVQAWN 232

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
            M+AGY++NG + +AE+LF+KM +R+  SW  L+NGLV SQR++ A   F +MPE C+KT
Sbjct: 233 LMIAGYLDNGCVGVAEDLFQKMHDRDLTSWKQLINGLVNSQRIDAAISYFKQMPETCEKT 292

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WN+I+   IRNGLVKE H  LEK PY NI SWTN+IVGYF +GEVG A+K+FE +  +D 
Sbjct: 293 WNSIISVLIRNGLVKEAHAYLEKYPYSNIASWTNVIVGYFEMGEVGSAIKVFELMTTRDV 352

Query: 301 TIWNATIFGLGENDRGEE 319
           T+WN  IFGLGEND GEE
Sbjct: 353 TVWNVMIFGLGENDLGEE 370

BLAST of Cp4.1LG08g03160 vs. TAIR10
Match: AT4G02750.1 (AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 275.0 bits (702), Expect = 6.5e-74
Identity = 126/296 (42.57%), Postives = 192/296 (64.86%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           +RNG  E A+KLFDEMP+R++V+WN MI+GY  N        LF  MPERD+ S+NT+++
Sbjct: 106 LRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLS 165

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           G  Q G VDDA+ +FD MP ++ VSWN++++ YV+N  +E+A  LF       ++SWN +
Sbjct: 166 GYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCL 225

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           +GG V   K+  A  +F  MN RD+VSW  +I+G A++G++++AR+LF+  P++D   W 
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
           AM++GYI+N  +E A ELF+KMPERN  SWN ++ G V  +R+E A+ LF  MP +   T
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQ 297
           WN ++  Y + G + E   + +K P  + VSW  +I GY   G    A+++F  ++
Sbjct: 346 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401

BLAST of Cp4.1LG08g03160 vs. TAIR10
Match: AT2G35030.1 (AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 239.6 bits (610), Expect = 3.0e-63
Identity = 107/261 (41.00%), Postives = 174/261 (66.67%), Query Frame = 1

Query: 4   GLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPER-DIFSYNTVIAGL 63
           G + EA+KLFD +P+R+VVTW  +I GY   G   +   LF R+  R ++ ++  +++G 
Sbjct: 60  GKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGY 119

Query: 64  MQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIG 123
           ++   +  A+ +F  MP R+VVSWN+MI GY ++G ++KA++LFDEMP ++++SWN ++ 
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVK 179

Query: 124 GLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWNAM 183
            LV  G++D A   F +M RRD+VSWT M+ GLA+ G+V++AR+LF+ MP ++  +WNAM
Sbjct: 180 ALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAM 239

Query: 184 MAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKTWN 243
           + GY +N +I+ A++LF+ MPER+F SWN ++ G + ++ +  A  LF  MPEK   +W 
Sbjct: 240 ITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWT 299

Query: 244 NIVLAYIRNGLVKETHGVLEK 264
            ++  Y+ N   +E   V  K
Sbjct: 300 TMITGYVENKENEEALNVFSK 320

BLAST of Cp4.1LG08g03160 vs. TAIR10
Match: AT1G09410.1 (AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 224.2 bits (570), Expect = 1.3e-58
Identity = 103/306 (33.66%), Postives = 180/306 (58.82%), Query Frame = 1

Query: 2   RNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAG 61
           R G + EA+KLFD    +++ +WN+M+ GYF N    D   LF  MP+R+I S+N +++G
Sbjct: 29  RIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSG 88

Query: 62  LMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLII 121
            M+ G++D+A+ +FD+MP R+VVSW +++ GYV NG                        
Sbjct: 89  YMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG------------------------ 148

Query: 122 GGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWNA 181
                  K+D AE  F KM  ++ VSWT+M+ G  + GR++ A KL+E +P KD+ A  +
Sbjct: 149 -------KVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS 208

Query: 182 MMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKTW 241
           M+ G  + G+++ A E+F++M ER+  +W  +V G   + RV+DAR++F  MPEK + +W
Sbjct: 209 MIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSW 268

Query: 242 NNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDAT 301
            ++++ Y++NG +++   + E  P   +++   +I G    GE+  A ++F+S+++++  
Sbjct: 269 TSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 303

Query: 302 IWNATI 308
            W   I
Sbjct: 329 SWQTVI 303

BLAST of Cp4.1LG08g03160 vs. TAIR10
Match: AT1G56690.1 (AT1G56690.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-57
Identity = 105/254 (41.34%), Postives = 160/254 (62.99%), Query Frame = 1

Query: 3   NGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGL 62
           NGL +EA++LFDEM +RNVV+WN ++ GY  N    +  ++F  MPER++ S+  ++ G 
Sbjct: 61  NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGY 120

Query: 63  MQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIG 122
           MQ G V +A+ +F  MP R+ VSW  M  G + +G ++KA +L+D MP+KDV++   +IG
Sbjct: 121 MQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIG 180

Query: 123 GLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWNAM 182
           GL   G++D A + F +M  R++V+WT MI+G  +  RV+ ARKLFE MP K + +W +M
Sbjct: 181 GLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSM 240

Query: 183 MAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKTWN 242
           + GY  +G+IE AEE FE MP +   + N ++ G      +  ARR+F  M ++   TW 
Sbjct: 241 LLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWR 300

Query: 243 NIVLAYIRNGLVKE 257
            ++ AY R G   E
Sbjct: 301 GMIKAYERKGFELE 314

BLAST of Cp4.1LG08g03160 vs. TAIR10
Match: AT1G62260.1 (AT1G62260.1 mitochondrial editing factor 9)

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-53
Identity = 104/337 (30.86%), Postives = 184/337 (54.60%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           +R+G + EA+ +F+++  RN VTWN MI GY      +    LF  MP+RD+ ++NT+I+
Sbjct: 51  IRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMIS 110

Query: 61  GLMQCGDV---DDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISW 120
           G + CG +   ++A+ +FD MP RD  SWN+MI+GY +N  + +A+ LF++MP ++ +SW
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170

Query: 121 NLIIGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFEN----MPM 180
           + +I G    G++DSA V F KM  +D      +++GL +  R+ +A  +       +  
Sbjct: 171 SAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSG 230

Query: 181 KDD--RAWNAMMAGYIENGQIEMAEELFEKMPE---------------RNFDSWNGLVNG 240
           ++D   A+N ++ GY + GQ+E A  LF+++P+               +N  SWN ++  
Sbjct: 231 REDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKA 290

Query: 241 LVGSQRVEDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLI 300
            +    V  AR LF +M ++   +WN ++  Y+    +++   +  + P  +  SW  ++
Sbjct: 291 YLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMV 350

Query: 301 VGYFGIGEVGIAVKIFESIQDKDATIWNATIFGLGEN 314
            GY  +G V +A   FE   +K    WN+ I    +N
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKN 387

BLAST of Cp4.1LG08g03160 vs. NCBI nr
Match: gi|449433223|ref|XP_004134397.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 6.6e-161
Identity = 270/318 (84.91%), Postives = 292/318 (91.82%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MRNGLVE+AQKLFD MPQRN+VTWNAMIRGYFLNG CSDGISLFRRMPERD+FSYNTVI 
Sbjct: 57  MRNGLVEQAQKLFDGMPQRNIVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIG 116

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQCGDVD AKDIFD+MPFRDVVSWNSMIAG +RNGLLE+AIQLFD MPLK+VISWNLI
Sbjct: 117 GLMQCGDVDGAKDIFDLMPFRDVVSWNSMIAGCIRNGLLEEAIQLFDGMPLKNVISWNLI 176

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           IGGLVNCGKLDSA  YFGKM+RRDLVSWTIMISGL RAGR+++AR LF NMP KD R WN
Sbjct: 177 IGGLVNCGKLDSAGEYFGKMSRRDLVSWTIMISGLCRAGRLDEARGLFNNMPTKDARVWN 236

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
           AMM GYIENG+IEMAEELF  MPERNF SWN LVNG VGSQRV+DAR+LFMEMP+KCQKT
Sbjct: 237 AMMVGYIENGKIEMAEELFGIMPERNFGSWNKLVNGFVGSQRVDDARKLFMEMPDKCQKT 296

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WNNIVLAYIRNGLV +TH +LEK PYGNI SWTNLIVGYFGIGEVG+AV+IFES+Q KD 
Sbjct: 297 WNNIVLAYIRNGLVLQTHALLEKIPYGNIASWTNLIVGYFGIGEVGMAVEIFESMQYKDT 356

Query: 301 TIWNATIFGLGENDRGEE 319
           T+WNATIFGLGEND+GEE
Sbjct: 357 TVWNATIFGLGENDKGEE 374

BLAST of Cp4.1LG08g03160 vs. NCBI nr
Match: gi|659076027|ref|XP_008438461.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like isoform X2 [Cucumis melo])

HSP 1 Score: 560.5 bits (1443), Expect = 2.2e-156
Identity = 264/318 (83.02%), Postives = 288/318 (90.57%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MR+GLVE+AQ+LFDEMPQRNVVTWNAMIRGYFLNG CSDGISLFRRMPERD+FSYNTVI 
Sbjct: 57  MRSGLVEQAQRLFDEMPQRNVVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIC 116

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQCGDVD AKDIFDVMPFRDVVSWNSMIAG +RNGLLE+AIQLF  MPLK+VISWNLI
Sbjct: 117 GLMQCGDVDGAKDIFDVMPFRDVVSWNSMIAGCIRNGLLEEAIQLFYGMPLKNVISWNLI 176

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           IGGLVN GKLDSA  YFGKM+RRDLVSWTIMISGL+RAGR+++AR LF NMP KD R WN
Sbjct: 177 IGGLVNSGKLDSAGEYFGKMSRRDLVSWTIMISGLSRAGRIDEARGLFNNMPTKDARVWN 236

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
            MM G IENG+IEMAEELF  MPERNFDSW+ LVNG VGS+R +DAR+LFMEMP+KCQKT
Sbjct: 237 VMMVGCIENGKIEMAEELFRIMPERNFDSWDNLVNGFVGSRRFDDARKLFMEMPDKCQKT 296

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WNNIVLA IRNGLV +TH +LEK PYGNI SWTNLIVGYFGIGEVG+AV+IFES+Q KD 
Sbjct: 297 WNNIVLANIRNGLVLQTHALLEKVPYGNIASWTNLIVGYFGIGEVGVAVEIFESMQYKDT 356

Query: 301 TIWNATIFGLGENDRGEE 319
           T+WNATIFGLGEND GEE
Sbjct: 357 TMWNATIFGLGENDEGEE 374

BLAST of Cp4.1LG08g03160 vs. NCBI nr
Match: gi|659076025|ref|XP_008438460.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like isoform X1 [Cucumis melo])

HSP 1 Score: 560.5 bits (1443), Expect = 2.2e-156
Identity = 264/318 (83.02%), Postives = 288/318 (90.57%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MR+GLVE+AQ+LFDEMPQRNVVTWNAMIRGYFLNG CSDGISLFRRMPERD+FSYNTVI 
Sbjct: 57  MRSGLVEQAQRLFDEMPQRNVVTWNAMIRGYFLNGRCSDGISLFRRMPERDVFSYNTVIC 116

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQCGDVD AKDIFDVMPFRDVVSWNSMIAG +RNGLLE+AIQLF  MPLK+VISWNLI
Sbjct: 117 GLMQCGDVDGAKDIFDVMPFRDVVSWNSMIAGCIRNGLLEEAIQLFYGMPLKNVISWNLI 176

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           IGGLVN GKLDSA  YFGKM+RRDLVSWTIMISGL+RAGR+++AR LF NMP KD R WN
Sbjct: 177 IGGLVNSGKLDSAGEYFGKMSRRDLVSWTIMISGLSRAGRIDEARGLFNNMPTKDARVWN 236

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
            MM G IENG+IEMAEELF  MPERNFDSW+ LVNG VGS+R +DAR+LFMEMP+KCQKT
Sbjct: 237 VMMVGCIENGKIEMAEELFRIMPERNFDSWDNLVNGFVGSRRFDDARKLFMEMPDKCQKT 296

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WNNIVLA IRNGLV +TH +LEK PYGNI SWTNLIVGYFGIGEVG+AV+IFES+Q KD 
Sbjct: 297 WNNIVLANIRNGLVLQTHALLEKVPYGNIASWTNLIVGYFGIGEVGVAVEIFESMQYKDT 356

Query: 301 TIWNATIFGLGENDRGEE 319
           T+WNATIFGLGEND GEE
Sbjct: 357 TMWNATIFGLGENDEGEE 374

BLAST of Cp4.1LG08g03160 vs. NCBI nr
Match: gi|1009140730|ref|XP_015887809.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Ziziphus jujuba])

HSP 1 Score: 473.0 bits (1216), Expect = 4.6e-130
Identity = 214/318 (67.30%), Postives = 265/318 (83.33%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MRNGLV++AQKLFDEMP+RN VTWNAMIRGYFLNG   + I LF RMPERD+FSYNT IA
Sbjct: 56  MRNGLVDQAQKLFDEMPRRNTVTWNAMIRGYFLNGDIENAIYLFERMPERDVFSYNTTIA 115

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQ GDVD A+ +F  M FRDVV+WNSM+AGY+RNG++++A+ +FD MPLKDV+SWNL+
Sbjct: 116 GLMQFGDVDGAEGVFKGMIFRDVVTWNSMVAGYIRNGMIDEAVWVFDGMPLKDVVSWNLV 175

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           +GGLVNCG+ D AE YF +M  RD+ SWTIM+SGLAR GRV +AR+LFE MP++D  AWN
Sbjct: 176 VGGLVNCGEFDLAEEYFKRMTTRDVASWTIMVSGLARTGRVFEARELFEAMPVRDIHAWN 235

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
           AM+ GYIE+G+IE+AE LF KMP+RNFDSW  LVNGLV S+RV DA +LF+EMP+KCQ T
Sbjct: 236 AMLVGYIEHGRIEIAEVLFHKMPKRNFDSWIVLVNGLVKSKRVNDAMKLFIEMPQKCQTT 295

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WN+I++   RNGL++E+H  LEK P  ++VSWTN++VGYF IGEVG A+K+FE +  +DA
Sbjct: 296 WNSILVELTRNGLIRESHAFLEKFPCTDVVSWTNILVGYFKIGEVGCAIKLFELMSIRDA 355

Query: 301 TIWNATIFGLGENDRGEE 319
           T +N TIFGLGEND GEE
Sbjct: 356 TAYNVTIFGLGENDHGEE 373

BLAST of Cp4.1LG08g03160 vs. NCBI nr
Match: gi|645235050|ref|XP_008224095.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Prunus mume])

HSP 1 Score: 467.2 bits (1201), Expect = 2.5e-128
Identity = 210/318 (66.04%), Postives = 259/318 (81.45%), Query Frame = 1

Query: 1   MRNGLVEEAQKLFDEMPQRNVVTWNAMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIA 60
           MR+G VEEAQKLFD+MP+RN VTWNAMIRGYFLNG   D I++F RM ERD+FSYNT+I 
Sbjct: 1   MRDGFVEEAQKLFDKMPRRNTVTWNAMIRGYFLNGQFQDAINIFSRMTERDVFSYNTMIT 60

Query: 61  GLMQCGDVDDAKDIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLI 120
           GLMQCGDVD A+ +FD M +RDVV+WNSM++GY+RNG++ +AIQ+FD MPLKDVISWNL+
Sbjct: 61  GLMQCGDVDGARQVFDRMIYRDVVTWNSMVSGYIRNGMIGEAIQVFDGMPLKDVISWNLV 120

Query: 121 IGGLVNCGKLDSAEVYFGKMNRRDLVSWTIMISGLARAGRVEKARKLFENMPMKDDRAWN 180
           +GGLVN G+ D AE YF +MN RDL SWTIMISG + AGRV +AR+LF+ M ++D +AWN
Sbjct: 121 VGGLVNSGEFDLAEKYFKRMNIRDLASWTIMISGFSIAGRVVEARELFDGMLVRDVQAWN 180

Query: 181 AMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVEDARRLFMEMPEKCQKT 240
           AM+ GYIENG + +AE LF+KMPER+ +SW  +VNGLV  QR+ DA  LFMEMPEKC KT
Sbjct: 181 AMILGYIENGYVAIAEGLFQKMPERDLESWTLMVNGLVKVQRINDALELFMEMPEKCPKT 240

Query: 241 WNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDA 300
           WN+I+   +RNGL +E H  LEK PY ++VSWTN+IVGY GIGEVG A+++FES+  +D 
Sbjct: 241 WNSIIFKLVRNGLTREAHAFLEKNPYKDVVSWTNMIVGYLGIGEVGSAIELFESMPTRDT 300

Query: 301 TIWNATIFGLGENDRGEE 319
             WNATIFGL END GEE
Sbjct: 301 AAWNATIFGLSENDLGEE 318

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP301_ARATH1.2e-7242.57Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN... [more]
PP185_ARATH5.4e-6241.00Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidop... [more]
PPR25_ARATH2.3e-5733.66Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN... [more]
PPR84_ARATH2.6e-5641.34Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidop... [more]
PPR88_ARATH3.0e-5230.86Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0L9N2_CUCSA4.6e-16184.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134600 PE=4 SV=1[more]
M5XLA4_PRUPE1.8e-12865.72Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025358mg PE=4 SV=1[more]
W9QY29_9ROSA1.1e-12766.35Uncharacterized protein OS=Morus notabilis GN=L484_004167 PE=4 SV=1[more]
A5BDH5_VITVI1.0e-12364.78Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026574 PE=4 SV=1[more]
V4U2W2_9ROSI6.8e-12061.32Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006438mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G02750.16.5e-7442.57 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G35030.13.0e-6341.00 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G09410.11.3e-5833.66 pentatricopeptide (PPR) repeat-containing protein[more]
AT1G56690.11.5e-5741.34 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G62260.11.7e-5330.86 mitochondrial editing factor 9[more]
Match NameE-valueIdentityDescription
gi|449433223|ref|XP_004134397.1|6.6e-16184.91PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Cucumis s... [more]
gi|659076027|ref|XP_008438461.1|2.2e-15683.02PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like isoform X2... [more]
gi|659076025|ref|XP_008438460.1|2.2e-15683.02PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like isoform X1... [more]
gi|1009140730|ref|XP_015887809.1|4.6e-13067.30PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Ziziphus ... [more]
gi|645235050|ref|XP_008224095.1|2.5e-12866.04PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Prunus mu... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g03160.1Cp4.1LG08g03160.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 270..298
score: 0.4coord: 209..236
score: 0.0044coord: 2..21
score: 0.0047coord: 53..79
score: 2.2E-5coord: 178..207
score: 4.9E-8coord: 84..112
score: 3.3E-10coord: 22..52
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 144..171
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 146..171
score: 4.8E-8coord: 53..83
score: 3.7E-6coord: 84..110
score: 1.8E-8coord: 115..145
score: 0.0012coord: 178..207
score: 5.1E-7coord: 22..52
score: 3.3E-6coord: 209..235
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 210..236
score: 6.193coord: 20..54
score: 10.457coord: 1..19
score: 6.456coord: 237..267
score: 5.338coord: 144..174
score: 10.918coord: 117..143
score: 5.656coord: 268..302
score: 7.596coord: 55..81
score: 6.303coord: 82..116
score: 12.31coord: 175..209
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 82..297
score: 1.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 112..211
score: 4.7
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 2..318
score: 9.7E

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g03160Cucumber (Chinese Long) v2cpecuB858
Cp4.1LG08g03160Cucumber (Chinese Long) v2cpecuB849
Cp4.1LG08g03160Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g03160Bottle gourd (USVL1VR-Ls)cpelsiB716
Cp4.1LG08g03160Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g03160Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g03160Watermelon (Charleston Gray)cpewcgB792
Cp4.1LG08g03160Watermelon (97103) v1cpewmB853
Cp4.1LG08g03160Melon (DHL92) v3.5.1cpemeB803
Cp4.1LG08g03160Melon (DHL92) v3.5.1cpemeB804
Cp4.1LG08g03160Cucumber (Gy14) v2cgybcpeB278
Cp4.1LG08g03160Cucumber (Gy14) v2cgybcpeB452
Cp4.1LG08g03160Melon (DHL92) v3.6.1cpemedB944
Cp4.1LG08g03160Silver-seed gourdcarcpeB0329
Cp4.1LG08g03160Silver-seed gourdcarcpeB0336
Cp4.1LG08g03160Silver-seed gourdcarcpeB1101
Cp4.1LG08g03160Silver-seed gourdcarcpeB1507
Cp4.1LG08g03160Cucumber (Chinese Long) v3cpecucB1045
Cp4.1LG08g03160Cucumber (Chinese Long) v3cpecucB1053
Cp4.1LG08g03160Wax gourdcpewgoB1100
Cp4.1LG08g03160Wax gourdcpewgoB1112
Cp4.1LG08g03160Wax gourdcpewgoB1118
Cp4.1LG08g03160Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g03160Cucurbita pepo (Zucchini)cpecpeB284
Cp4.1LG08g03160Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g03160Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g03160Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG08g03160Cucumber (Gy14) v1cgycpeB1012
Cp4.1LG08g03160Cucurbita maxima (Rimu)cmacpeB022
Cp4.1LG08g03160Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g03160Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g03160Cucurbita maxima (Rimu)cmacpeB554
Cp4.1LG08g03160Cucurbita maxima (Rimu)cmacpeB650
Cp4.1LG08g03160Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g03160Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g03160Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g03160Cucurbita moschata (Rifu)cmocpeB599
Cp4.1LG08g03160Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g03160Wild cucumber (PI 183967)cpecpiB851
Cp4.1LG08g03160Wild cucumber (PI 183967)cpecpiB858