Carg06250 (gene) Silver-seed gourd

Overview
NameCarg06250
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat
LocationCucurbita_argyrosperma_scaffold_016 : 475113 .. 477298 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTTGTAGCTCGGCCCTCATTTGCACTCAGACCCACATGGATTTTCTCTCTATATCGCAGGACATCAATCTTGCTTTCAACTTCCACCTACTGCTTGCAAGCCCGTCATGCTCCACCCACGTTTTCGAATCTAAAGCCTCTCAATTTCGAGATCTCAAGCTGTATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACTCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGAGATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCAATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATACGGCTGAAGAGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGATAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCTTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGACGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACTCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGGTATTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGGTTTGAAGCTTTTTACTCGAATGATAAGGTTAGGTCCACGTCTCGATAAAGCTACATTTACGAGTGTTCTAACGATCTGTTCCAACCTGGAAGCTTTGCAGCTTGGTAGACAAGCACATGGACTTGTTATAAAAGCAGGATTCAGTGACATTGTTTCGGTCTCAAATGCTATGGTTACTATGTATGCAAGATGTGGGAACATGGATTGCGCTTTGATGGAGTTTCGTTCGATGTCGAACAGGGATGTCATTTCTTGGAATTCTATTATCTGTGGGTTTGCTCACCATGGAAATGGAAAAGAAGCACTGGAAATGATTGAAAAAATGAGATTAGCTAACATAGAACCTAATCATATAACCTTTATTGGTGTTCTGTCTGCTTGTAGCCATAAGGGTCTAGTGGAACAAGGAAGGTACTATTTCAATTTGATGAAAAACGAATGTTCTATTCAGCCATTGAGCGAGCACTATACGTGCTTAGTTGATTTGTTCGGGCGATTCGGGCTTATTGACGAGGCACTGAGTTTTCTAGTCGAGATGAAAACGGAGGAAATTGAAGTTCCTCCGAGCGTTTGGGGGGCTTTGCTTGGAGCTTGCAGAATCCATAAGAATTATGATATAGGGGTGATTGCAGGTGAAAAGGTTCTGGAGAAGGAGCCTCATAACTCTGGAGTGTATTTGATTTTAGCAGAAATGTATTTGGGAAGTGGGAAAAGAGAAGATGCTGAAAGGATATTGGCAAGAATGAAGAACAATGGAGTTAAGAAACAACCAGGTTGTAGTTGGGTTGAGATAAACAATAGCGGACACGTCTTTCTTTCGGGAGATCGTTCGAACCCGCATTTTGATAGAATCTGTTGTATTTTAAAGCTGTTGAATCTGGAGATGGAGTTGCAAACAACATAGTGATGAATAAAAATGCAGGTCTAGATCAGTTTCATAGCTATATCAGTGGAAAATTTCGCGAGTTGTTACTAGAACTTCATTCATTTCAAGTTTTCGAGTTCAAAACATCTGTAAGCTATGCTACGAACGAGGAACCTCTTGCCTTGTTGAGCATTTAG

mRNA sequence

ATGTTCTTTGTAGCTCGGCCCTCATTTGCACTCAGACCCACATGGATTTTCTCTCTATATCGCAGGACATCAATCTTGCTTTCAACTTCCACCTACTGCTTGCAAGCCCGTCATGCTCCACCCACGTTTTCGAATCTAAAGCCTCTCAATTTCGAGATCTCAAGCTGTATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACTCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGAGATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCAATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATACGGCTGAAGAGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGATAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCTTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGACGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACTCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGGTATTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGGTTTGAAGCTTTTTACTCGAATGATAAGGTTAGGTCCACGTCTCGATAAAGCTACATTTACGAGTGTTCTAACGATCTGTTCCAACCTGGAAGCTTTGCAGCTTGGTAGACAAGCACATGGACTTGTTATAAAAGCAGGATTCAGTGACATTGTTTCGGTCTCAAATGCTATGGTTACTATGTATGCAAGATGTGGGAACATGGATTGCGCTTTGATGGAGTTTCGTTCGATGTCGAACAGGGATGTCATTTCTTGGAATTCTATTATCTGTGGGTTTGCTCACCATGGAAATGGAAAAGAAGCACTGGAAATGATTGAAAAAATGAGATTAGCTAACATAGAACCTAATCATATAACCTTTATTGGTGTTCTGTCTGCTTGTAGCCATAAGGGTCTAGTGGAACAAGGAAGGTACTATTTCAATTTGATGAAAAACGAATGTTCTATTCAGCCATTGAGCGAGCACTATACGTGCTTAGTTGATTTGTTCGGGCGATTCGGGCTTATTGACGAGGCACTGAGTTTTCTAGTCGAGATGAAAACGGAGGAAATTGAAGTTCCTCCGAGCGTTTGGGGGGCTTTGCTTGGAGCTTGCAGAATCCATAAGAATTATGATATAGGGGTGATTGCAGGTGAAAAGGTTCTGGAGAAGGAGCCTCATAACTCTGGAGTGTATTTGATTTTAGCAGAAATGTATTTGGGAAGTGGGAAAAGAGAAGATGCTGAAAGGATATTGGCAAGAATGAAGAACAATGGAGTTAAGAAACAACCAGCTGTTGAATCTGGAGATGGAGTTGCAAACAACATAGTGATGAATAAAAATGCAGGTCTAGATCAGTTTCATAGCTATATCAGTGGAAAATTTCGCGAGTTGTTACTAGAACTTCATTCATTTCAAGTTTTCGAGTTCAAAACATCTGTAAGCTATGCTACGAACGAGGAACCTCTTGCCTTGTTGAGCATTTAG

Coding sequence (CDS)

ATGTTCTTTGTAGCTCGGCCCTCATTTGCACTCAGACCCACATGGATTTTCTCTCTATATCGCAGGACATCAATCTTGCTTTCAACTTCCACCTACTGCTTGCAAGCCCGTCATGCTCCACCCACGTTTTCGAATCTAAAGCCTCTCAATTTCGAGATCTCAAGCTGTATGAGAAATGGGTTAGTGGAAGAAGCCCAGAAACTGTTCGACGAAATGCCTCAACGAAATGTTGTGACTTGGAACTCGATGATTCGCGGCTACTTCTTGAACGGGTGGTGTAGTGATGGGATTAGCTTGTTTCGTCGAATGCCAGAGCGAGATATTTTTTCTTATAATACGGTGATTGCTGGGTTGATGCAATGTGGGGATGTTGATGATGCGAAGGAGATTTTTGATGTAATGCCGTTTAGAGATGTTGTGAGTTGGAATTCGATGATTGCGGGGTATGTTCGAAATGGGTTACTTGAGAAAGCAATACAGTTGTTCGATGAAATGCCTTTGAAAGATGTAATTTCTTGGAACTTGATAATTGGAGGGCTTGTAAACTGCGGCAAACTTGATACGGCTGAAGAGTATTTTGGCAAAATGAACAGGCGTGATCTTGTGTCGTGGACCATCATGATCTCGGGGCTTGCCCGTGCAGGACGCGTTGATAAGGCAAGGAAGCTTTTTGAGAACATGCCCATGAAAGATGATCGAGCTTGGAATGCCATGATGGCTGGGTATATAGAGAATGGGCAGATTGAAATGGCAGAGGAGCTGTTTGAGAAAATGCCTGAACGAAACTTTGATTCTTGGAACGGTTTAGTGAATGGATTGGTTGGAAGCCAAAGGGTTGACGATGCTAGGAGACTTTTTATGGAAATGCCAGAGAAATGCCAAAAGACATGGAACAATATTGTGCTAGCATACATAAGGAATGGACTGGTAAAAGAGACTCATGGAGTTCTTGAGAAAACTCCATATGGTAATATAGTTTCATGGACTAATTTGATCGTGGGGTATTTTGGGATTGGTGAAGTTGGAATAGCAGTGAAGATCTTTGAATCAATCCAGGATAAGGATGCAACCATATGGAATGCTACAATATTCGGATTAGGAGAGAACGACCGAGGCGAGGAAGGTTTGAAGCTTTTTACTCGAATGATAAGGTTAGGTCCACGTCTCGATAAAGCTACATTTACGAGTGTTCTAACGATCTGTTCCAACCTGGAAGCTTTGCAGCTTGGTAGACAAGCACATGGACTTGTTATAAAAGCAGGATTCAGTGACATTGTTTCGGTCTCAAATGCTATGGTTACTATGTATGCAAGATGTGGGAACATGGATTGCGCTTTGATGGAGTTTCGTTCGATGTCGAACAGGGATGTCATTTCTTGGAATTCTATTATCTGTGGGTTTGCTCACCATGGAAATGGAAAAGAAGCACTGGAAATGATTGAAAAAATGAGATTAGCTAACATAGAACCTAATCATATAACCTTTATTGGTGTTCTGTCTGCTTGTAGCCATAAGGGTCTAGTGGAACAAGGAAGGTACTATTTCAATTTGATGAAAAACGAATGTTCTATTCAGCCATTGAGCGAGCACTATACGTGCTTAGTTGATTTGTTCGGGCGATTCGGGCTTATTGACGAGGCACTGAGTTTTCTAGTCGAGATGAAAACGGAGGAAATTGAAGTTCCTCCGAGCGTTTGGGGGGCTTTGCTTGGAGCTTGCAGAATCCATAAGAATTATGATATAGGGGTGATTGCAGGTGAAAAGGTTCTGGAGAAGGAGCCTCATAACTCTGGAGTGTATTTGATTTTAGCAGAAATGTATTTGGGAAGTGGGAAAAGAGAAGATGCTGAAAGGATATTGGCAAGAATGAAGAACAATGGAGTTAAGAAACAACCAGCTGTTGAATCTGGAGATGGAGTTGCAAACAACATAGTGATGAATAAAAATGCAGGTCTAGATCAGTTTCATAGCTATATCAGTGGAAAATTTCGCGAGTTGTTACTAGAACTTCATTCATTTCAAGTTTTCGAGTTCAAAACATCTGTAAGCTATGCTACGAACGAGGAACCTCTTGCCTTGTTGAGCATTTAG

Protein sequence

MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNGLVEEAQKLFDEMPQRNVVTWNSMIRGYFLNGWCSDGISLFRRMPERDIFSYNTVIAGLMQCGDVDDAKEIFDVMPFRDVVSWNSMIAGYVRNGLLEKAIQLFDEMPLKDVISWNLIIGGLVNCGKLDTAEEYFGKMNRRDLVSWTIMISGLARAGRVDKARKLFENMPMKDDRAWNAMMAGYIENGQIEMAEELFEKMPERNFDSWNGLVNGLVGSQRVDDARRLFMEMPEKCQKTWNNIVLAYIRNGLVKETHGVLEKTPYGNIVSWTNLIVGYFGIGEVGIAVKIFESIQDKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGRFGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVYLILAEMYLGSGKREDAERILARMKNNGVKKQPAVESGDGVANNIVMNKNAGLDQFHSYISGKFRELLLELHSFQVFEFKTSVSYATNEEPLALLSI
Homology
[Close]
BLAST of Carg06250 vs. NCBI nr
Match: XP_022974531.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima])

HSP 1 Score: 607.8 bits (1566), Expect = 4.5e-170
Identity = 622/632 (98.42%), Postives = 625/632 (98.89%), Query Frame = 0 

Query: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVARPSFALRPTWIFSLYRRTSILLSTST CLQARHAPPTFSNLKPLN EIS+CMRNG
Sbjct: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTSCLQARHAPPTFSNLKPLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LVEEAQKLFDEMPQRN    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LVEEAQKLFDEMPQRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMS+RDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSSRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540

Query: 541 FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY 600
           FGLIDEALSFLVEMK EEIEVPPSVWGALLGACRIHKNYD+GVIAGEKVLEKEPHNSGVY
Sbjct: 541 FGLIDEALSFLVEMKMEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKEPHNSGVY 600

Query: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 633
           LILAEMYLGSGKREDAERILARMKNNGVKKQP
Sbjct: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 632

[Close]
BLAST of Carg06250 vs. NCBI nr
Match: XP_023538642.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 605.1 bits (1559), Expect = 2.9e-169
Identity = 622/632 (98.42%), Postives = 625/632 (98.89%), Query Frame = 0 

Query: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVAR SFALRPTWIFSLYRRTSILLSTST CLQARHAPPTFSNLKPLN EISSCMRNG
Sbjct: 1   MFFVARSSFALRPTWIFSLYRRTSILLSTSTSCLQARHAPPTFSNLKPLNSEISSCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LVEEAQKLFDEMPQRNVV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LVEEAQKLFDEMPQRNVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KDATIWN
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDATIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEEGLKLFTRMI+LGP LDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEEGLKLFTRMIKLGPCLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMS+RDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSSRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540

Query: 541 FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY 600
           FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYD+GVIAGEKVLEKEPHNSGVY
Sbjct: 541 FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKEPHNSGVY 600

Query: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 633
           LILAEMYLGSGKREDAERILARMKNNGVKKQP
Sbjct: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 632

[Close]
BLAST of Carg06250 vs. NCBI nr
Match: XP_022937344.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata])

HSP 1 Score: 600.1 bits (1546), Expect = 9.4e-168
Identity = 619/632 (97.94%), Postives = 621/632 (98.26%), Query Frame = 0 

Query: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLN EIS+CMRNG
Sbjct: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LV+EAQKLFDEMPQRN    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LVKEAQKLFDEMPQRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TIWN
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIWN 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
           ATIFGLGENDRGEE LKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA
Sbjct: 361 ATIFGLGENDRGEESLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI
Sbjct: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540
           EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540

Query: 541 FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY 600
           FGLIDEALSFLVEMK EEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY
Sbjct: 541 FGLIDEALSFLVEMKMEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY 600

Query: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 633
           LILAEMYLGSGKREDAERILARMKNNGVKKQP
Sbjct: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 632

[Close]
BLAST of Carg06250 vs. NCBI nr
Match: XP_004134397.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Cucumis sativus] >KGN56811.1 hypothetical protein Csa_3G134600 [Cucumis sativus])

HSP 1 Score: 494.2 bits (1271), Expect = 7.3e-136
Identity = 561/632 (88.77%), Postives = 587/632 (92.88%), Query Frame = 0 

Query: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MF  ARPSFALRPTWIFSLY R S  L+TST  LQA HAPPTF NLK LN EIS+CMRNG
Sbjct: 1   MFLFARPSFALRPTWIFSLYLRNSCSLTTSTCRLQASHAPPTFPNLKLLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LVE+AQKLFD MPQRN+V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LVEQAQKLFDGMPQRNIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
                LGEND+GEEGLKLFTRMIRLGP LDKATFTS+LTICS+LE LQLGRQ H L++K 
Sbjct: 361 XXXXXLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHALILKE 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GF+  V+VSNAM+ MYARCGNMDCA MEF SMS+RDVISWNS+ICGFAHHGNG++ALEM 
Sbjct: 421 GFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICGFAHHGNGEDALEMF 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540
           EKMRLANIEPNHITFIGVLSACSHKGL+++GRYYFN MKNECS++PL EHYTCLVDLFGR
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIEHYTCLVDLFGR 540

Query: 541 FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY 600
           FGLIDEALSFL EMK EEIEVPPSVWGALLGACRIHKNYD+GVIAGEKVLEKEPHN+GVY
Sbjct: 541 FGLIDEALSFLAEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKEPHNAGVY 600

Query: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 633
           LILAEMYL +GKRE+AE+I ARMKNNGVKKQP
Sbjct: 601 LILAEMYLRNGKRENAEKIFARMKNNGVKKQP 632

[Close]
BLAST of Carg06250 vs. NCBI nr
Match: XP_022157962.1 (pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia])

HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133
Identity = 564/632 (89.24%), Postives = 581/632 (91.93%), Query Frame = 0 

Query: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           M FVARPS  LRPTW FSL+ RTSI L+TST CLQ+RH P +F NLKPLN EIS+CMRNG
Sbjct: 1   MIFVARPSLVLRPTWSFSLHLRTSISLATSTSCLQSRHTPASFLNLKPLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LVEEAQKLFDEM QRNVV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LVEEAQKLFDEMAQRNVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
                 GEND+GEEGLKLFTRMIRLGP  DKATFTSVLTICS LE LQLG+Q H LV+KA
Sbjct: 361 XXXXXXGENDQGEEGLKLFTRMIRLGPHPDKATFTSVLTICSGLETLQLGKQTHALVLKA 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GF+  V+VSNAMVTMYARCGNMDCAL+EF SMS RDVISWNSIICGFA HGNG EALEM 
Sbjct: 421 GFNGFVAVSNAMVTMYARCGNMDCALIEFSSMSTRDVISWNSIICGFAQHGNGNEALEMF 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540
           EKMRLAN+EPNHITFIGVLSACSH GLV+QGR+YFN MKN CSIQPLSEHYTCLVDLFGR
Sbjct: 481 EKMRLANVEPNHITFIGVLSACSHNGLVDQGRHYFNFMKNMCSIQPLSEHYTCLVDLFGR 540

Query: 541 FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY 600
           FGLI+EALSFLVEMK E IE+P SVWGALLG CRIHKNYD+GVIAGEKVLEKEPHNSGVY
Sbjct: 541 FGLINEALSFLVEMKAEGIEIPSSVWGALLGDCRIHKNYDVGVIAGEKVLEKEPHNSGVY 600

Query: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 633
           LILAEMYL  GKREDAERILARMK NGVKKQP
Sbjct: 601 LILAEMYLRGGKREDAERILARMKINGVKKQP 632

[Close]
BLAST of Carg06250 vs. TAIR10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 247.7 bits (631), Expect = 2.1e-65
Identity = 125/307 (40.72%), Postives = 188/307 (61.24%), Query Frame = 0 

Query: 355 DATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAH 414
           DA +WN+ I G  +N R +  L+LF RM R G   ++AT TSVL  C+ L  L+LG QAH
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283

Query: 415 GLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGK 474
             ++K  +   + ++NA+V MY +CG+++ AL  F  M  RDVI+W+++I G A +G  +
Sbjct: 284 VHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQ 343

Query: 475 EALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCL 534
           EAL++ E+M+ +  +PN+IT +GVL ACSH GL+E G YYF  MK    I P+ EHY C+
Sbjct: 344 EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 403

Query: 535 VDLFGRFGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEP 594
           +DL G+ G +D+A+  L EM+ E   V    W  LLGACR+ +N  +   A +KV+  +P
Sbjct: 404 IDLLGKAGKLDDAVKLLNEMECEPDAV---TWRTLLGACRVQRNMVLAEYAAKKVIALDP 463

Query: 595 HNSGVYLILAEMYLGSGKREDAERILARMKNNGVKKQPAVESGDGVANNIVMNKNAGLDQ 654
            ++G Y +L+ +Y  S K +  E I  RM++ G+KK+P         + I +NK     Q
Sbjct: 464 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPG-------CSWIEVNK-----Q 513

Query: 655 FHSYISG 662
            H++I G
Sbjct: 524 IHAFIIG 513

[Close]
BLAST of Carg06250 vs. TAIR10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 236.5 bits (602), Expect = 5.0e-62
Identity = 111/279 (39.78%), Postives = 170/279 (60.93%), Query Frame = 0 

Query: 353 DKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQ 412
           ++D  +W + I G  +N   EE L L+ RM   G   +  T  SVL  CS+L  L+LG+Q
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444

Query: 413 AHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGN 472
            HG  IK GF   V + +A+ TMY++CG+++   + FR   N+DV+SWN++I G +H+G 
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504

Query: 473 GKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYT 532
           G EALE+ E+M    +EP+ +TF+ ++SACSHKG VE+G +YFN+M ++  + P  +HY 
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564

Query: 533 CLVDLFGRFGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEK 592
           C+VDL  R G + EA  F+   ++  I+    +W  LL AC+ H   ++GV AGEK++  
Sbjct: 565 CMVDLLSRAGQLKEAKEFI---ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 624

Query: 593 EPHNSGVYLILAEMYLGSGKREDAERILARMKNNGVKKQ 632
               S  Y+ L+ +Y   G+  D ER+   M+ NGV K+
Sbjct: 625 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660

[Close]
BLAST of Carg06250 vs. TAIR10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-60
Identity = 115/247 (46.56%), Postives = 159/247 (64.37%), Query Frame = 0 

Query: 386 GPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCA 445
           G R +  T  ++L++ S+L +L  G+Q HG  +K+G    VSVSNA++TMYA+ GN+  A
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467

Query: 446 LMEFRSM-SNRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSH 505
              F  +   RD +SW S+I   A HG+ +EALE+ E M +  + P+HIT++GV SAC+H
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527

Query: 506 KGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGRFGLIDEALSFLVEMKTEEIEVPPS 565
            GLV QGR YF++MK+   I P   HY C+VDLFGR GL+ EA  F+ +M    IE    
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVV 587

Query: 566 VWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVYLILAEMYLGSGKREDAERILARMK 625
            WG+LL ACR+HKN D+G +A E++L  EP NSG Y  LA +Y   GK E+A +I   MK
Sbjct: 588 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 647

Query: 626 NNGVKKQ 632
           +  VKK+
Sbjct: 648 DGRVKKE 651

[Close]
BLAST of Carg06250 vs. TAIR10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-60
Identity = 117/308 (37.99%), Postives = 179/308 (58.12%), Query Frame = 0 

Query: 355 DATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAH 414
           D   WNA + G  ++   EE L++F RM R G   +  TF S +   S    ++ G+Q H
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715

Query: 415 GLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGK 474
            ++ K G+     V NA+++MYA+CG++  A  +F  +S ++ +SWN+II  ++ HG G 
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGS 775

Query: 475 EALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCL 534
           EAL+  ++M  +N+ PNH+T +GVLSACSH GLV++G  YF  M +E  + P  EHY C+
Sbjct: 776 EALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV 835

Query: 535 VDLFGRFGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEP 594
           VD+  R GL+  A  F+ EM    I+    VW  LL AC +HKN +IG  A   +LE EP
Sbjct: 836 VDMLTRAGLLSRAKEFIQEM---PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEP 895

Query: 595 HNSGVYLILAEMYLGSGKREDAERILARMKNNGVKKQPA---VESGDGVANNIVMNKNAG 654
            +S  Y++L+ +Y  S K +  +    +MK  GVKK+P    +E  + + +  V ++N  
Sbjct: 896 EDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHP 955

Query: 655 L-DQFHSY 659
           L D+ H Y
Sbjct: 956 LADEIHEY 960

[Close]
BLAST of Carg06250 vs. TAIR10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 230.7 bits (587), Expect = 2.7e-60
Identity = 110/246 (44.72%), Postives = 156/246 (63.41%), Query Frame = 0 

Query: 393 TFTSVLTICSNLEALQLGRQAHGLVIKAGF------SDIVSVSNAMVTMYARCGNMDCAL 452
           +F ++L  C++L  L LG QAH  V+K GF       D + V N+++ MY +CG ++   
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447

Query: 453 MEFRSMSNRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKG 512
           + FR M  RD +SWN++I GFA +G G EALE+  +M  +  +P+HIT IGVLSAC H G
Sbjct: 448 LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507

Query: 513 LVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGRFGLIDEALSFLVEMKTEEIEVPPSVW 572
            VE+GR+YF+ M  +  + PL +HYTC+VDL GR G ++EA S + EM  +   V   +W
Sbjct: 508 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV---IW 567

Query: 573 GALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVYLILAEMYLGSGKREDAERILARMKNN 632
           G+LL AC++H+N  +G    EK+LE EP NSG Y++L+ MY   GK ED   +   M+  
Sbjct: 568 GSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKE 627

[Close]
BLAST of Carg06250 vs. Swiss-Prot
Match: sp|Q9SI53|PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.9e-64
Identity = 125/307 (40.72%), Postives = 188/307 (61.24%), Query Frame = 0 

Query: 355 DATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAH 414
           DA +WN+ I G  +N R +  L+LF RM R G   ++AT TSVL  C+ L  L+LG QAH
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283

Query: 415 GLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGK 474
             ++K  +   + ++NA+V MY +CG+++ AL  F  M  RDVI+W+++I G A +G  +
Sbjct: 284 VHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQ 343

Query: 475 EALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCL 534
           EAL++ E+M+ +  +PN+IT +GVL ACSH GL+E G YYF  MK    I P+ EHY C+
Sbjct: 344 EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 403

Query: 535 VDLFGRFGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEP 594
           +DL G+ G +D+A+  L EM+ E   V    W  LLGACR+ +N  +   A +KV+  +P
Sbjct: 404 IDLLGKAGKLDDAVKLLNEMECEPDAV---TWRTLLGACRVQRNMVLAEYAAKKVIALDP 463

Query: 595 HNSGVYLILAEMYLGSGKREDAERILARMKNNGVKKQPAVESGDGVANNIVMNKNAGLDQ 654
            ++G Y +L+ +Y  S K +  E I  RM++ G+KK+P         + I +NK     Q
Sbjct: 464 EDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPG-------CSWIEVNK-----Q 513

Query: 655 FHSYISG 662
            H++I G
Sbjct: 524 IHAFIIG 513

[Close]
BLAST of Carg06250 vs. Swiss-Prot
Match: sp|P93005|PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.9e-61
Identity = 111/279 (39.78%), Postives = 170/279 (60.93%), Query Frame = 0 

Query: 353 DKDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQ 412
           ++D  +W + I G  +N   EE L L+ RM   G   +  T  SVL  CS+L  L+LG+Q
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444

Query: 413 AHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGN 472
            HG  IK GF   V + +A+ TMY++CG+++   + FR   N+DV+SWN++I G +H+G 
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504

Query: 473 GKEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYT 532
           G EALE+ E+M    +EP+ +TF+ ++SACSHKG VE+G +YFN+M ++  + P  +HY 
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564

Query: 533 CLVDLFGRFGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEK 592
           C+VDL  R G + EA  F+   ++  I+    +W  LL AC+ H   ++GV AGEK++  
Sbjct: 565 CMVDLLSRAGQLKEAKEFI---ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMAL 624

Query: 593 EPHNSGVYLILAEMYLGSGKREDAERILARMKNNGVKKQ 632
               S  Y+ L+ +Y   G+  D ER+   M+ NGV K+
Sbjct: 625 GSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKE 660

[Close]
BLAST of Carg06250 vs. Swiss-Prot
Match: sp|Q9SHZ8|PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 2.2e-59
Identity = 115/247 (46.56%), Postives = 159/247 (64.37%), Query Frame = 0 

Query: 386 GPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTMYARCGNMDCA 445
           G R +  T  ++L++ S+L +L  G+Q HG  +K+G    VSVSNA++TMYA+ GN+  A
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467

Query: 446 LMEFRSM-SNRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSH 505
              F  +   RD +SW S+I   A HG+ +EALE+ E M +  + P+HIT++GV SAC+H
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527

Query: 506 KGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGRFGLIDEALSFLVEMKTEEIEVPPS 565
            GLV QGR YF++MK+   I P   HY C+VDLFGR GL+ EA  F+ +M    IE    
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKM---PIEPDVV 587

Query: 566 VWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVYLILAEMYLGSGKREDAERILARMK 625
            WG+LL ACR+HKN D+G +A E++L  EP NSG Y  LA +Y   GK E+A +I   MK
Sbjct: 588 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 647

Query: 626 NNGVKKQ 632
           +  VKK+
Sbjct: 648 DGRVKKE 651

[Close]
BLAST of Carg06250 vs. Swiss-Prot
Match: sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 231.9 bits (590), Expect = 2.2e-59
Identity = 117/308 (37.99%), Postives = 179/308 (58.12%), Query Frame = 0 

Query: 355 DATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAH 414
           D   WNA + G  ++   EE L++F RM R G   +  TF S +   S    ++ G+Q H
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH 715

Query: 415 GLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGK 474
            ++ K G+     V NA+++MYA+CG++  A  +F  +S ++ +SWN+II  ++ HG G 
Sbjct: 716 AVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGS 775

Query: 475 EALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCL 534
           EAL+  ++M  +N+ PNH+T +GVLSACSH GLV++G  YF  M +E  + P  EHY C+
Sbjct: 776 EALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV 835

Query: 535 VDLFGRFGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEP 594
           VD+  R GL+  A  F+ EM    I+    VW  LL AC +HKN +IG  A   +LE EP
Sbjct: 836 VDMLTRAGLLSRAKEFIQEM---PIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEP 895

Query: 595 HNSGVYLILAEMYLGSGKREDAERILARMKNNGVKKQPA---VESGDGVANNIVMNKNAG 654
            +S  Y++L+ +Y  S K +  +    +MK  GVKK+P    +E  + + +  V ++N  
Sbjct: 896 EDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHP 955

Query: 655 L-DQFHSY 659
           L D+ H Y
Sbjct: 956 LADEIHEY 960

[Close]
BLAST of Carg06250 vs. Swiss-Prot
Match: sp|Q9SIT7|PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.9e-59
Identity = 110/246 (44.72%), Postives = 156/246 (63.41%), Query Frame = 0 

Query: 393 TFTSVLTICSNLEALQLGRQAHGLVIKAGF------SDIVSVSNAMVTMYARCGNMDCAL 452
           +F ++L  C++L  L LG QAH  V+K GF       D + V N+++ MY +CG ++   
Sbjct: 388 SFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGY 447

Query: 453 MEFRSMSNRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHITFIGVLSACSHKG 512
           + FR M  RD +SWN++I GFA +G G EALE+  +M  +  +P+HIT IGVLSAC H G
Sbjct: 448 LVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAG 507

Query: 513 LVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGRFGLIDEALSFLVEMKTEEIEVPPSVW 572
            VE+GR+YF+ M  +  + PL +HYTC+VDL GR G ++EA S + EM  +   V   +W
Sbjct: 508 FVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV---IW 567

Query: 573 GALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVYLILAEMYLGSGKREDAERILARMKNN 632
           G+LL AC++H+N  +G    EK+LE EP NSG Y++L+ MY   GK ED   +   M+  
Sbjct: 568 GSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKE 627

[Close]
BLAST of Carg06250 vs. TrEMBL
Match: tr|A0A0A0L9N2|A0A0A0L9N2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134600 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 4.8e-136
Identity = 561/632 (88.77%), Postives = 587/632 (92.88%), Query Frame = 0 

Query: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MF  ARPSFALRPTWIFSLY R S  L+TST  LQA HAPPTF NLK LN EIS+CMRNG
Sbjct: 1   MFLFARPSFALRPTWIFSLYLRNSCSLTTSTCRLQASHAPPTFPNLKLLNSEISNCMRNG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LVE+AQKLFD MPQRN+V  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LVEQAQKLFDGMPQRNIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
                LGEND+GEEGLKLFTRMIRLGP LDKATFTS+LTICS+LE LQLGRQ H L++K 
Sbjct: 361 XXXXXLGENDKGEEGLKLFTRMIRLGPCLDKATFTSILTICSDLETLQLGRQTHALILKE 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GF+  V+VSNAM+ MYARCGNMDCA MEF SMS+RDVISWNS+ICGFAHHGNG++ALEM 
Sbjct: 421 GFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSMICGFAHHGNGEDALEMF 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540
           EKMRLANIEPNHITFIGVLSACSHKGL+++GRYYFN MKNECS++PL EHYTCLVDLFGR
Sbjct: 481 EKMRLANIEPNHITFIGVLSACSHKGLIDKGRYYFNFMKNECSLRPLIEHYTCLVDLFGR 540

Query: 541 FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY 600
           FGLIDEALSFL EMK EEIEVPPSVWGALLGACRIHKNYD+GVIAGEKVLEKEPHN+GVY
Sbjct: 541 FGLIDEALSFLAEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKEPHNAGVY 600

Query: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 633
           LILAEMYL +GKRE+AE+I ARMKNNGVKKQP
Sbjct: 601 LILAEMYLRNGKRENAEKIFARMKNNGVKKQP 632

[Close]
BLAST of Carg06250 vs. TrEMBL
Match: tr|A0A1S3AWI6|A0A1S3AWI6_CUCME (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucumis melo OX=3656 GN=LOC103483546 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 1.3e-117
Identity = 539/632 (85.28%), Postives = 561/632 (88.77%), Query Frame = 0 

Query: 1   MFFVARPSFALRPTWIFSLYRRTSILLSTSTYCLQARHAPPTFSNLKPLNFEISSCMRNG 60
           MF +ARPSFALRP WIFSLY R S  L+TST   QA HA PTF NLK LN +IS+CMR+G
Sbjct: 1   MFLLARPSFALRPKWIFSLYLRNSCSLTTSTCRSQASHATPTFPNLKLLNSDISNCMRSG 60

Query: 61  LVEEAQKLFDEMPQRNVVTWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           LVE+AQ+LFDEMPQRNVVTW   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  LVEQAQRLFDEMPQRNVVTWNAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDATIWN 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 ATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKA 420
                  END GEEGLKLFTRMIRLGPRLDKATFTSVLTICS+LE LQLGRQ H L++K 
Sbjct: 361 XXXXXXXENDEGEEGLKLFTRMIRLGPRLDKATFTSVLTICSDLETLQLGRQTHALILKE 420

Query: 421 GFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMI 480
           GF+  V+VSNAM+ MYARCGNMDCA MEF SMS+RDVISWNSIICGFAHHGNG++ALEM 
Sbjct: 421 GFNGFVAVSNAMINMYARCGNMDCAFMEFSSMSDRDVISWNSIICGFAHHGNGEDALEMF 480

Query: 481 EKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGR 540
           EKM+LANIEPNHITFIGVLSACSHKGLV++                        VDL GR
Sbjct: 481 EKMKLANIEPNHITFIGVLSACSHKGLVDK------------------------VDLLGR 540

Query: 541 FGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVY 600
           FGLIDEALSFL+EMK EEIEVPPSVWGALLGACRIHKNYD+GVIAGEKVLEKEPHNSGVY
Sbjct: 541 FGLIDEALSFLIEMKAEEIEVPPSVWGALLGACRIHKNYDVGVIAGEKVLEKEPHNSGVY 600

Query: 601 LILAEMYLGSGKREDAERILARMKNNGVKKQP 633
           LILAEMY  +GKREDAERILARMKNNGVKKQP
Sbjct: 601 LILAEMYSRNGKREDAERILARMKNNGVKKQP 608

[Close]
BLAST of Carg06250 vs. TrEMBL
Match: tr|A0A1R3JKG2|A0A1R3JKG2_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_15965 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 7.5e-105
Identity = 179/278 (64.39%), Postives = 228/278 (82.01%), Query Frame = 0 

Query: 354 KDATIWNATIFGLGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQA 413
           +D T+WNA I+GLGE D+GEEG K F RM   G   D++TFTS+L+ICSNL +L LG+Q+
Sbjct: 283 RDVTVWNAMIWGLGEYDQGEEGFKFFIRMKESGFSPDESTFTSILSICSNLLSLHLGKQS 342

Query: 414 HGLVIKAGFSDIVSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNG 473
           H  V+K+G +D  +VSNA++TMY RCGNM  AL+EF S  ++DVISWNS+ICGFAHHGN 
Sbjct: 343 HAQVVKSGLNDFTAVSNALITMYERCGNMQSALLEFFSSPSQDVISWNSVICGFAHHGNA 402

Query: 474 KEALEMIEKMRLANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTC 533
           ++ALEM E+MRL +++PN ITFIGVLSACS+ GLV+QG+YYF+ MKN+CS++P +EHYTC
Sbjct: 403 EKALEMFERMRLTDVKPNQITFIGVLSACSYAGLVDQGKYYFDYMKNKCSLKPTTEHYTC 462

Query: 534 LVDLFGRFGLIDEALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKE 593
           +VDL GRFGLIDEA+SFL +M+ + +EVP SVWGALLGACRIH N ++GVIA E+ LE E
Sbjct: 463 IVDLLGRFGLIDEAMSFLNQMRVDGVEVPASVWGALLGACRIHNNIEVGVIAAERFLEIE 522

Query: 594 PHNSGVYLILAEMYLGSGKREDAERILARMKNNGVKKQ 632
           P N+GV+LILAEMYL  GKR DAE + ARM+  GV+KQ
Sbjct: 523 PLNAGVHLILAEMYLSCGKRADAEIVRARMEEMGVRKQ 560

[Close]
BLAST of Carg06250 vs. TrEMBL
Match: tr|A0A1Q3D247|A0A1Q3D247_CEPFO (PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_30016 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 3.1e-103
Identity = 184/258 (71.32%), Postives = 218/258 (84.50%), Query Frame = 0 

Query: 376 LKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKAGFSDIVSVSNAMVTM 435
           +KLF RM   GP  D+AT TSVLTICS+L AL LG+Q H L IK+     ++VSNAMVTM
Sbjct: 144 VKLFIRMKEAGPSPDEATVTSVLTICSSLPALHLGKQTHALAIKSSLDRFIAVSNAMVTM 203

Query: 436 YARCGNMDCALMEFRSM-SNRDVISWNSIICGFAHHGNGKEALEMIEKMRLANIEPNHIT 495
           YARCGNM  AL+EF SM ++ DVISWNSIICGFAHHG G++ALEM E+MRL +I+PNHIT
Sbjct: 204 YARCGNMHSALLEFSSMLTHDDVISWNSIICGFAHHGYGEKALEMFEQMRLTDIKPNHIT 263

Query: 496 FIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGRFGLIDEALSFLVEM 555
           F+GVLSACSH GLV +G++YF+ MKN+C +QP +EHYTC+VDL GRFGLIDEA+ FL +M
Sbjct: 264 FVGVLSACSHAGLVNEGKHYFDYMKNKCFVQPTTEHYTCIVDLLGRFGLIDEAMRFLDQM 323

Query: 556 KTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVYLILAEMYLGSGKRE 615
           KT+ I+VP SVWGALLGACRIHKN ++G IAGEKVLE EP+NSG+YLILAEM+L SGKR+
Sbjct: 324 KTDGIDVPASVWGALLGACRIHKNTEVGEIAGEKVLEMEPYNSGIYLILAEMHLSSGKRD 383

Query: 616 DAERILARMKNNGVKKQP 633
           DAERILARMK NGVKKQP
Sbjct: 384 DAERILARMKANGVKKQP 401

[Close]
BLAST of Carg06250 vs. TrEMBL
Match: tr|A0A1U8LVX3|A0A1U8LVX3_GOSHI (pentatricopeptide repeat-containing protein At4g02750-like OS=Gossypium hirsutum OX=3635 GN=LOC107931360 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 3.5e-102
Identity = 177/266 (66.54%), Postives = 217/266 (81.58%), Query Frame = 0 

Query: 366 LGENDRGEEGLKLFTRMIRLGPRLDKATFTSVLTICSNLEALQLGRQAHGLVIKAGFSDI 425
           LGE + GEEG K F RM   G   D+ATFTS+LTICSNL +L LG Q H  V+K+G +  
Sbjct: 383 LGETNFGEEGSKFFIRMKESGFHPDEATFTSILTICSNLPSLDLGNQIHAEVVKSGLNHF 442

Query: 426 VSVSNAMVTMYARCGNMDCALMEFRSMSNRDVISWNSIICGFAHHGNGKEALEMIEKMRL 485
            ++SNA+VTMY RCGNM  AL+EF SM   DVISWNSIICGFAHHGN ++ALEM E+MRL
Sbjct: 443 TAISNALVTMYERCGNMHSALLEFVSMQRHDVISWNSIICGFAHHGNAEKALEMFERMRL 502

Query: 486 ANIEPNHITFIGVLSACSHKGLVEQGRYYFNLMKNECSIQPLSEHYTCLVDLFGRFGLID 545
            +++PNHITFIGVLSACSH GL+++G+YYF+ MK++CS+QP +EHYTC+VDL GRFGLID
Sbjct: 503 TDVKPNHITFIGVLSACSHAGLIDKGKYYFDYMKSKCSLQPTTEHYTCIVDLLGRFGLID 562

Query: 546 EALSFLVEMKTEEIEVPPSVWGALLGACRIHKNYDIGVIAGEKVLEKEPHNSGVYLILAE 605
           EA+SFL +M+ + IEVP SVWGALLGACRIH N ++GVIA E+VLEKEP NSG+YLILAE
Sbjct: 563 EAMSFLNQMRADGIEVPASVWGALLGACRIHNNMELGVIAAERVLEKEPRNSGIYLILAE 622

Query: 606 MYLGSGKREDAERILARMKNNGVKKQ 632
           MYL  G+R++AE I ARM+  GV+KQ
Sbjct: 623 MYLSCGRRDEAESIRARMEEKGVRKQ 648

The following BLAST results are available for this feature:
BLAST of Carg06250 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022974531.14.5e-17098.42pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima][more]
XP_023538642.12.9e-16998.42pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp... [more]
XP_022937344.19.4e-16897.94pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita moschata][more]
XP_004134397.17.3e-13688.77PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Cucumis s... [more]
XP_022157962.11.2e-13389.24pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia][more]
BLAST of Carg06250 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G03880.12.1e-6540.72Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G33680.15.0e-6239.78Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G22070.11.2e-6046.56pentatricopeptide (PPR) repeat-containing protein[more]
AT4G13650.11.2e-6037.99Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G13600.12.7e-6044.72Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg06250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SI53|PP147_ARATH3.9e-6440.72Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
sp|P93005|PP181_ARATH8.9e-6139.78Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX... [more]
sp|Q9SHZ8|PP168_ARATH2.2e-5946.56Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
sp|Q9SVP7|PP307_ARATH2.2e-5937.99Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
sp|Q9SIT7|PP151_ARATH4.9e-5944.72Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg06250 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9N2|A0A0A0L9N2_CUCSA4.8e-13688.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134600 PE=4 SV=1[more]
tr|A0A1S3AWI6|A0A1S3AWI6_CUCME1.3e-11785.28pentatricopeptide repeat-containing protein At4g02750-like OS=Cucumis melo OX=36... [more]
tr|A0A1R3JKG2|A0A1R3JKG2_9ROSI7.5e-10564.39Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_15965 PE=4 SV=1[more]
tr|A0A1Q3D247|A0A1Q3D247_CEPFO3.1e-10371.32PPR domain-containing protein/PPR_2 domain-containing protein/PPR_3 domain-conta... [more]
tr|A0A1U8LVX3|A0A1U8LVX3_GOSHI3.5e-10266.54pentatricopeptide repeat-containing protein At4g02750-like OS=Gossypium hirsutum... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06250-RACarg06250-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 412..510
e-value: 5.3E-20
score: 73.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 47..199
e-value: 3.4E-40
score: 140.3
coord: 200..321
e-value: 4.4E-25
score: 90.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 322..411
e-value: 5.6E-12
score: 47.8
coord: 520..657
e-value: 2.0E-10
score: 42.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 356..392
coord: 579..622
coord: 201..265
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 456..503
e-value: 2.3E-10
score: 40.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 53..77
e-value: 7.9E-5
score: 22.5
coord: 109..135
e-value: 2.9E-5
score: 23.9
coord: 78..108
e-value: 2.3E-7
score: 30.5
coord: 326..354
e-value: 0.92
score: 9.8
coord: 140..168
e-value: 7.7E-10
score: 38.3
coord: 234..263
e-value: 1.1E-7
score: 31.4
coord: 358..386
e-value: 0.0089
score: 16.1
coord: 530..557
e-value: 3.7E-4
score: 20.5
coord: 265..292
e-value: 0.012
score: 15.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 200..227
e-value: 8.8E-9
score: 34.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 171..201
e-value: 3.2E-4
score: 18.7
coord: 458..491
e-value: 2.4E-7
score: 28.5
coord: 531..560
e-value: 0.0029
score: 15.7
coord: 140..166
e-value: 4.1E-8
score: 30.9
coord: 234..263
e-value: 1.2E-6
score: 26.3
coord: 109..139
e-value: 8.3E-6
score: 23.7
coord: 265..291
e-value: 8.9E-4
score: 17.3
coord: 202..227
e-value: 1.2E-7
score: 29.4
coord: 78..108
e-value: 7.0E-6
score: 23.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 76..110
score: 10.523
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..354
score: 7.245
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 231..265
score: 11.674
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 456..490
score: 11.63
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 390..424
score: 5.404
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 425..455
score: 6.423
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 527..561
score: 8.287
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 293..323
score: 5.338
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 355..389
score: 8.934
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 45..75
score: 8.221
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 266..292
score: 6.248
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 491..521
score: 6.599
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 111..137
score: 6.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 138..172
score: 12.31
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 173..199
score: 6.215
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 596..630
score: 8.813
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 200..230
score: 10.972
NoneNo IPR availablePANTHERPTHR24015:SF424SUBFAMILY NOT NAMEDcoord: 44..194
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 331..633
coord: 246..346
coord: 44..194
NoneNo IPR availablePANTHERPTHR24015:SF424SUBFAMILY NOT NAMEDcoord: 331..633
coord: 246..346

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg06250Cla021483Watermelon (97103) v1carwmB0961
Carg06250Csa3G134600Cucumber (Chinese Long) v2carcuB0975
Carg06250MELO3C006375Melon (DHL92) v3.5.1carmeB0941
Carg06250CSPI03G11550Wild cucumber (PI 183967)carcpiB0998
Carg06250Cucsa.255800Cucumber (Gy14) v1carcgyB1077
Carg06250CmaCh06G012900Cucurbita maxima (Rimu)carcmaB1325
Carg06250CmoCh06G012980Cucurbita moschata (Rifu)carcmoB1288
Carg06250Lsi05G017730Bottle gourd (USVL1VR-Ls)carlsiB878
Carg06250Cp4.1LG08g03160Cucurbita pepo (Zucchini)carcpeB1333
Carg06250CsGy3G011620Cucumber (Gy14) v2carcgybB0948
Carg06250MELO3C006375.2Melon (DHL92) v3.6.1carmedB0947
Carg06250CsaV3_3G011670Cucumber (Chinese Long) v3carcucB1003
Carg06250Cla97C05G084610Watermelon (97103) v2carwmbB1008
Carg06250Bhi01G000469Wax gourdcarwgoB1116
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg06250Silver-seed gourdcarcarB274
Carg06250Silver-seed gourdcarcarB266
Carg06250Silver-seed gourdcarcarB600
Carg06250Silver-seed gourdcarcarB610
Carg06250Silver-seed gourdcarcarB649
Carg06250Cucumber (Gy14) v2carcgybB0945
Carg06250Cucumber (Gy14) v2carcgybB0947
Carg06250Cucumber (Gy14) v1carcgyB1080
Carg06250Cucurbita maxima (Rimu)carcmaB1320
Carg06250Cucurbita maxima (Rimu)carcmaB1321
Carg06250Cucurbita maxima (Rimu)carcmaB1322
Carg06250Cucurbita maxima (Rimu)carcmaB1323
Carg06250Cucurbita maxima (Rimu)carcmaB1327
Carg06250Cucurbita moschata (Rifu)carcmoB1284
Carg06250Cucurbita moschata (Rifu)carcmoB1285
Carg06250Cucurbita moschata (Rifu)carcmoB1287
Carg06250Cucurbita moschata (Rifu)carcmoB1289
Carg06250Cucurbita pepo (Zucchini)carcpeB1328
Carg06250Cucurbita pepo (Zucchini)carcpeB1329
Carg06250Cucurbita pepo (Zucchini)carcpeB1330
Carg06250Cucurbita pepo (Zucchini)carcpeB1331
Carg06250Cucurbita pepo (Zucchini)carcpeB1332
Carg06250Wild cucumber (PI 183967)carcpiB0997
Carg06250Wild cucumber (PI 183967)carcpiB0995
Carg06250Cucumber (Chinese Long) v2carcuB0974
Carg06250Cucumber (Chinese Long) v3carcucB1001
Carg06250Cucumber (Chinese Long) v3carcucB1002
Carg06250Bottle gourd (USVL1VR-Ls)carlsiB876
Carg06250Bottle gourd (USVL1VR-Ls)carlsiB879
Carg06250Melon (DHL92) v3.5.1carmeB0939
Carg06250Melon (DHL92) v3.6.1carmedB0945
Carg06250Watermelon (Charleston Gray)carwcgB0935
Carg06250Watermelon (Charleston Gray)carwcgB0936
Carg06250Watermelon (Charleston Gray)carwcgB0938
Carg06250Watermelon (97103) v1carwmB0962
Carg06250Watermelon (97103) v2carwmbB1009
Carg06250Watermelon (97103) v2carwmbB1011
Carg06250Wax gourdcarwgoB1114
Carg06250Wax gourdcarwgoB1120
Carg06250Wax gourdcarwgoB1123