Cp4.1LG08g02430 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g02430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAcyl carrier protein
LocationCp4.1LG08 : 2770428 .. 2772569 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGAGCAATCGAAGAGTCACTGCAGGAAGAAGAGAAAAAAAATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTCCGATTCTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGCTCCGTTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGACCAAGGAGGAGGTTATTGAGAGAGTCCTCTCTGTTGTCAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGATTCGATCTTATACCTCTCTTTCACTTGTTTTTTCAGCTTCTTGAGTTGTTTTTTCAAGACTGTTGGAATGCGGGAAGAATAGGTTGAAAGTGTAGAAATTCTGTAACATGCCGATTCAATAGTTTAATGTTCTGATGTGCGATCCTGGTGGATTCCGAATCGTATTCATGGTTAAATCTCCTATGCTTTATCTGTGCGAATGGAAAATTGGGGCAAACCATAACTCACGACGACTTATTCCCTGATCAAGCGTTAATCTAGAAAGTGGCACTTGATAATTTTTGCTGAAATGCCATTTGATTTAATATTTGATTCGGCATCTTTTGGAAATTTAACTTCTTGGCTGAAAGTTTGGGTCGATTGCCGTATTGCACACAATATATCTCCCTTCGTTTATGTGGATTGCTTGGCTAGGTTCACTAGGACTAACTATTGACACCTACATTTCTTGAATTCGCGGAGGTGAACGGTTTCTAATCTTACACATTTTGGGTATAGTCGATGATAGATGACAAATCATTAATTGCCAAAGGGTGGTTATCTCAATTTTAAGGATGCATCTTGGCTGGTATATGCCAAGCAAGCTCACTCAGACAGTGTCCGTGTGCATCTTGCTGCTCTTTTTGTGATGTCTATATCTGTTTAGTTTGGACACTATAATGCTTTTCTCCTTCACTTTAGTGCACATAGACATAAAACTGTCTTTCTCTTATCCTGTTCGTCCTCTTTTGCTCCCTTTTTTTTTGCCAACATATCATATCTACTTCTTATTCGTCTTCTTTTGCCTTTTTGCCTTTTTGTTTTTTCTTTTGTGTCAATTTGTGTATGATCAATCTTGTAGATTGTAATGTCGTTTACTCAAAAGATGTATTTTCTCATCTCACTTGTCCCAGGCGTTATTTTCATATTGCCCTTAGTCTCCAAAGAACTTTTGCTAACATATTCCTTTTGGTCTTTTGATCACTGAATTGTGGTTTACCTCCTTATTACTTGACCTTATCGTGTTGTATTCCTAACGTACTCCCGAAAGCCAGGCTATGCTATAGTAGATATTACACACTTTTTTGAGATATTCCCAAGAACTCGGCTATGCCATATAGTGAATATTACACTCCTTTTCGAGCCATCTTAAGGTTAGGAACGATCAAAAGCAGCTAAACTATGTCACCCAGTTTCTACTATTAATTTTTTTGTCACTTCCAAGCAGCATCTCTTCCCTACTAAACTTCAATTATAGCTTGGTTGAAATGTTGCTGCAATTATTGGGTTTTCCGTTATTTATCTGCAGGTGAGCCCTGATGGTCATTTCCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCTTGGAAGAGGAGTTCAAGCTAGAGATCCCAGACAAGGAGGCTGATAAAATAGATTCCTGTAATCTTGCAATCGAGTACGTATACAACCATCCAATGGCTAGTTGACAAAGTACTAGCATCTTTCTCTTTATTTCTTTTTTGGTTTTTTGGAGTATGTTATCGAGCCAATGAATATTCATCTCTACATCGTTGTTTCGAGCCTTCTTGGATGCTTGTCAAGAGTCGTGTTCTTCACACTGTGATGAAAAATAATTGCAACTGCTTGGAACATAAATCATTCTGTCCAGACAAATTTTCAGGGCGTACAATGGTTCTAACTTCAAGCACTTGCTTGCTATTTATCTGGTAGAAAAAGGTTTGAGTTAGCTGTTTCTTGACTATGCATCTTAACATCTGTGGCATCTTTTCATGGATAATGAGATTGTTTGATTTCAAAGTTTGATCTTCTCTTCTAAATTGCTTTTATACTTAGTAGCTTTTTTACTTAGGGATCTCAAGGAGAGATTCTTTGTCTTCAAAGTTCTGATATAAAT

mRNA sequence

TCGAGCAATCGAAGAGTCACTGCAGGAAGAAGAGAAAAAAAATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTCCGATTCTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGCTCCGTTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGACCAAGGAGGAGGTTATTGAGAGAGTCCTCTCTGTTGTCAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGAGCCCTGATGGTCATTTCCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCTTGGAAGAGGAGTTCAAGCTAGAGATCCCAGACAAGGAGGCTGATAAAATAGATTCCTGTAATCTTGCAATCGAGTACGTATACAACCATCCAATGGCTAGTTGACAAAGTACTAGCATCTTTCTCTTTATTTCTTTTTTGGTTTTTTGGAGTATGTTATCGAGCCAATGAATATTCATCTCTACATCGTTGTTTCGAGCCTTCTTGGATGCTTGTCAAGAGTCGTGTTCTTCACACTGTGATGAAAAATAATTGCAACTGCTTGGAACATAAATCATTCTGTCCAGACAAATTTTCAGGGCGTACAATGGTTCTAACTTCAAGCACTTGCTTGCTATTTATCTGGTAGAAAAAGGTTTGAGTTAGCTGTTTCTTGACTATGCATCTTAACATCTGTGGCATCTTTTCATGGATAATGAGATTGTTTGATTTCAAAGTTTGATCTTCTCTTCTAAATTGCTTTTATACTTAGTAGCTTTTTTACTTAGGGATCTCAAGGAGAGATTCTTTGTCTTCAAAGTTCTGATATAAAT

Coding sequence (CDS)

ATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTCCGATTCTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGCTCCGTTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGACCAAGGAGGAGGTTATTGAGAGAGTCCTCTCTGTTGTCAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGAGCCCTGATGGTCATTTCCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCTTGGAAGAGGAGTTCAAGCTAGAGATCCCAGACAAGGAGGCTGATAAAATAGATTCCTGTAATCTTGCAATCGAGTACGTATACAACCATCCAATGGCTAGTTGA

Protein sequence

MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVYNHPMAS
Homology
[Close]
BLAST of Cp4.1LG08g02430 vs. Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-42
Identity = 88/126 (69.84%), Postives = 105/126 (83.33%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALR A+LRH+RVPV+   L + +       + ++R FSSHDDHL++E V++RVL VVK 
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIG----FLGTIRSFSSHDDHLSREAVVDRVLDVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPSKV+P+ HFQ DLGLDSLDTVEIVMA+EEEFKLEIPDKEADKIDSC+LAIEYVY
Sbjct: 61  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 120

Query: 121 NHPMAS 127
           NHPM+S
Sbjct: 121 NHPMSS 122

[Close]
BLAST of Cp4.1LG08g02430 vs. Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.3e-26
Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQ-PASCSVASLRLFSSH--DDHLTKEEVIERVLSV 60
           MA R A+LR++RV V       REC  P S     LR FS       L K EV +RVLSV
Sbjct: 1   MAARGAMLRYLRVNVNPTIQNPRECVLPFSIL---LRRFSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIE 120
           VK   KVDPSKV+P  +FQ DLGLDSLD+VE+VMALEEEF  EIPD EADKI S +LA++
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 YVYNHPMA 126
           ++ +HP A
Sbjct: 121 FIASHPQA 125

[Close]
BLAST of Cp4.1LG08g02430 vs. Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 7.5e-19
Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 4   RAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKCHPK 63
           R AV   VR  V   A    +  P   +  ++R +S+   HL K+EV  R+  V+    K
Sbjct: 14  RPAVASAVRAGVARPAFV--QAVPKVAAFQAVRFYSA-GGHLKKDEVFSRIAQVLSGFDK 73

Query: 64  V-DPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVYNH 123
           V DP  ++   HF  DLGLDSLDTVE+VMA+EEEF +EIPDK+AD+I S + A+EY+ + 
Sbjct: 74  VNDPKNITETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQ 133

Query: 124 PMAS 127
           P A+
Sbjct: 134 PDAN 134

[Close]
BLAST of Cp4.1LG08g02430 vs. Swiss-Prot
Match: ACPM_YEAST (Acyl carrier protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACP1 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-15
Identity = 43/102 (42.16%), Postives = 71/102 (69.61%), Query Frame = 1 

Query: 29  SCSVASLRLFSSHDDHLTKEEVIERVLSVVKCHPKVDPS----KVSPDGHFQKDLGLDSL 88
           S ++ + R +S++   L+K++V +RV+ V+K   K  P+    ++S D  F KDLGLDSL
Sbjct: 27  SNTILAQRFYSAN---LSKDQVSQRVIDVIKAFDKNSPNIANKQISSDTQFHKDLGLDSL 86

Query: 89  DTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVYNHPMAS 127
           DTVE+++A+EEEF +EIPDK AD++ S    ++Y+ ++P A+
Sbjct: 87  DTVELLVAIEEEFDIEIPDKVADELRSVGETVDYIASNPDAN 125

[Close]
BLAST of Cp4.1LG08g02430 vs. Swiss-Prot
Match: ACP_SYNY3 (Acyl carrier protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=acpP PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-15
Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 1 

Query: 48  EEVIERVLSVVKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEAD 107
           +E+ E+V  +V    +VDP KV+PD  F +DLG DSLDTVE+VMALEEEF +EIPD+ A+
Sbjct: 3   QEIFEKVKKIVVEQLEVDPDKVTPDATFAEDLGADSLDTVELVMALEEEFDIEIPDEVAE 62

Query: 108 KIDSCNLAIEYV 120
            ID+   A+E++
Sbjct: 63  TIDTVGKAVEHI 74

[Close]
BLAST of Cp4.1LG08g02430 vs. TrEMBL
Match: A0A0A0L986_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128860 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 8.8e-59
Identity = 115/126 (91.27%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F+ALARRECQP  CS  SLRLFSSHDDHLTK+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of Cp4.1LG08g02430 vs. TrEMBL
Match: A0A0A0L3Y9_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128850 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.5e-53
Identity = 110/126 (87.30%), Postives = 113/126 (89.68%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPVRF ALARRECQP  CS  SLRLFSS DD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVRFSALARRECQPTPCSGGSLRLFSSQDDQSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVNPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of Cp4.1LG08g02430 vs. TrEMBL
Match: A0A0A0L6L3_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128840 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-50
Identity = 105/126 (83.33%), Postives = 111/126 (88.10%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAV+RH+RVPV+F ALARREC    CSV  LRLFSSHDD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVIRHLRVPVQFSALARRECHATQCSVEFLRLFSSHDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           H KVDPSKVSP+ HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKI SC+LAIEYVY
Sbjct: 61  HQKVDPSKVSPNVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIASCDLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of Cp4.1LG08g02430 vs. TrEMBL
Match: W9R594_9ROSA (Acyl carrier protein OS=Morus notabilis GN=L484_023903 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-47
Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFAL-ARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVK 60
           MALR+A+LRHVRVPV+   L ARR  QP   S   LR  SSHDDHLTKEEVI+RVLSVVK
Sbjct: 1   MALRSALLRHVRVPVQTLTLTARRFDQPLRASTTLLRWMSSHDDHLTKEEVIDRVLSVVK 60

Query: 61  CHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYV 120
             PKVDPSKVSPD HF+KDLGLDSLD+VEIVMALEEEFKLEIPDKEADKIDSCNLAIEY+
Sbjct: 61  SFPKVDPSKVSPDVHFEKDLGLDSLDSVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYI 120

Query: 121 YNHPMAS 127
           YNHPMA+
Sbjct: 121 YNHPMAA 127

[Close]
BLAST of Cp4.1LG08g02430 vs. TrEMBL
Match: A0A0M4BXN3_JATCU (Acyl carrier protein OS=Jatropha curcas PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.8e-46
Identity = 99/126 (78.57%), Postives = 109/126 (86.51%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAA+LRHVR+PV+   LA  + QP S  ++S RL SSHDDHLTKE+VI+RVL VVK 
Sbjct: 1   MALRAALLRHVRIPVQTLTLAGHKSQPWSLCISS-RLMSSHDDHLTKEQVIDRVLDVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPSKVSPD HFQKDLGLDSLD VEI+MALEEEFKLEIPDKEA KIDSCNLAIEYVY
Sbjct: 61  FPKVDPSKVSPDVHFQKDLGLDSLDNVEIIMALEEEFKLEIPDKEAVKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMA+
Sbjct: 121 NHPMAA 125

[Close]
BLAST of Cp4.1LG08g02430 vs. TAIR10
Match: AT2G44620.1 (AT2G44620.1 mitochondrial acyl carrier protein 1)

HSP 1 Score: 173.7 bits (439), Expect = 7.1e-44
Identity = 88/126 (69.84%), Postives = 105/126 (83.33%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALR A+LRH+RVPV+   L + +       + ++R FSSHDDHL++E V++RVL VVK 
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIG----FLGTIRSFSSHDDHLSREAVVDRVLDVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPSKV+P+ HFQ DLGLDSLDTVEIVMA+EEEFKLEIPDKEADKIDSC+LAIEYVY
Sbjct: 61  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 120

Query: 121 NHPMAS 127
           NHPM+S
Sbjct: 121 NHPMSS 122

[Close]
BLAST of Cp4.1LG08g02430 vs. TAIR10
Match: AT1G65290.1 (AT1G65290.1 mitochondrial acyl carrier protein 2)

HSP 1 Score: 118.2 bits (295), Expect = 3.6e-27
Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQ-PASCSVASLRLFSSH--DDHLTKEEVIERVLSV 60
           MA R A+LR++RV V       REC  P S     LR FS       L K EV +RVLSV
Sbjct: 1   MAARGAMLRYLRVNVNPTIQNPRECVLPFSIL---LRRFSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIE 120
           VK   KVDPSKV+P  +FQ DLGLDSLD+VE+VMALEEEF  EIPD EADKI S +LA++
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 YVYNHPMA 126
           ++ +HP A
Sbjct: 121 FIASHPQA 125

[Close]
BLAST of Cp4.1LG08g02430 vs. TAIR10
Match: AT5G47630.1 (AT5G47630.1 mitochondrial acyl carrier protein 3)

HSP 1 Score: 79.3 bits (194), Expect = 1.8e-15
Identity = 45/119 (37.82%), Postives = 75/119 (63.03%), Query Frame = 1 

Query: 3   LRAAVLRHVR--VPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 62
           +R+++L+H+R  V VR  +L + E    S  + +    ++ D    +++++ RV+ +VK 
Sbjct: 4   IRSSILQHLRLRVSVRPTSLLQNENGFKSIGIFNFTSEAAADGG--QDQILSRVIELVKK 63

Query: 63  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYV 120
           + K + S+V+    FQKDL LDSLD  E+VMA+EEEF +EIPD++ADK+  C     Y+
Sbjct: 64  YDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYI 120

[Close]
BLAST of Cp4.1LG08g02430 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-09
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1 

Query: 47  KEEVIERVLSVVKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEA 106
           K+E IE+V ++VK    + P K         DLG DSLDTVEIVM LEEEF +++ +++A
Sbjct: 57  KQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKA 116

Query: 107 DKIDSCNLAIEYV 120
            KI +   A E +
Sbjct: 117 QKIATVEQAAELI 129

[Close]
BLAST of Cp4.1LG08g02430 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 51.2 bits (121), Expect = 5.3e-07
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1 

Query: 47  KEEVIERVLSVVKCHPKV-DPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKE 106
           K+E +E+V  +VK    + D  KV+    F  +LG DSLDTVEIVM LEEEF + + ++ 
Sbjct: 58  KQETVEKVSEIVKKQLSLTDDQKVTAGTKFT-ELGADSLDTVEIVMGLEEEFGITMAEER 117

Query: 107 ADKIDSCNLAIEYV 120
           A +I +   A E +
Sbjct: 118 AKEIATVQQAAELI 130

[Close]
BLAST of Cp4.1LG08g02430 vs. NCBI nr
Match: gi|778677673|ref|XP_011650836.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58
Identity = 115/126 (91.27%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F+ALARRECQP  CS  SLRLFSSHDDHLTK+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of Cp4.1LG08g02430 vs. NCBI nr
Match: gi|659075680|ref|XP_008438272.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-58
Identity = 114/126 (90.48%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F+ALARRECQP  CS  SLRLFSSHDDH+TK+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTPCSGGSLRLFSSHDDHMTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of Cp4.1LG08g02430 vs. NCBI nr
Match: gi|778677670|ref|XP_011650835.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 7.9e-53
Identity = 110/126 (87.30%), Postives = 113/126 (89.68%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPVRF ALARRECQP  CS  SLRLFSS DD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVRFSALARRECQPTPCSGGSLRLFSSQDDQSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVNPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of Cp4.1LG08g02430 vs. NCBI nr
Match: gi|659075678|ref|XP_008438270.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-52
Identity = 109/126 (86.51%), Postives = 113/126 (89.68%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F ALARRECQP  CS  SLRLFSS DD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVQFSALARRECQPTPCSGGSLRLFSSQDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVTPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of Cp4.1LG08g02430 vs. NCBI nr
Match: gi|659075676|ref|XP_008438269.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 5.1e-52
Identity = 108/126 (85.71%), Postives = 114/126 (90.48%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F ALARRECQPA CS   LRLFSSHDD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVQFSALARRECQPAPCSDGYLRLFSSHDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           H KVDPSKVSP+ HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSC+LAIEYVY
Sbjct: 61  HTKVDPSKVSPNVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCDLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMA+
Sbjct: 121 NHPMAN 126

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g02430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACPM1_ARATH1.3e-4269.84Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=... [more]
ACPM2_ARATH6.3e-2656.25Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=... [more]
ACPM_NEUCR7.5e-1944.35Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74... [more]
ACPM_YEAST1.3e-1542.16Acyl carrier protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204... [more]
ACP_SYNY32.9e-1554.17Acyl carrier protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=acpP PE=... [more]
BLAST of Cp4.1LG08g02430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L986_CUCSA8.8e-5991.27Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128860 PE=3 SV=1[more]
A0A0A0L3Y9_CUCSA5.5e-5387.30Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128850 PE=3 SV=1[more]
A0A0A0L6L3_CUCSA3.4e-5083.33Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128840 PE=3 SV=1[more]
W9R594_9ROSA3.5e-4780.31Acyl carrier protein OS=Morus notabilis GN=L484_023903 PE=3 SV=1[more]
A0A0M4BXN3_JATCU3.8e-4678.57Acyl carrier protein OS=Jatropha curcas PE=2 SV=1[more]
BLAST of Cp4.1LG08g02430 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44620.17.1e-4469.84 mitochondrial acyl carrier protein 1[more]
AT1G65290.13.6e-2756.25 mitochondrial acyl carrier protein 2[more]
AT5G47630.11.8e-1537.82 mitochondrial acyl carrier protein 3[more]
AT3G05020.14.4e-0943.84 acyl carrier protein 1[more]
AT5G27200.15.3e-0741.89 acyl carrier protein 5[more]
BLAST of Cp4.1LG08g02430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778677673|ref|XP_011650836.1|1.3e-5891.27PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus][more]
gi|659075680|ref|XP_008438272.1|1.6e-5890.48PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
gi|778677670|ref|XP_011650835.1|7.9e-5387.30PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus][more]
gi|659075678|ref|XP_008438270.1|2.3e-5286.51PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
gi|659075676|ref|XP_008438269.1|5.1e-5285.71PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR009081PP-bd_ACP
IPR006162Ppantetheine_attach_site
IPR003231Acyl_carrier
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0051607 defense response to virus
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g02430.1Cp4.1LG08g02430.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 87..122
score: 5.0
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 49..123
score: 17
IPR003231Acyl carrier protein (ACP)TIGRFAMsTIGR00517TIGR00517coord: 48..122
score: 9.6
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 78..93
scor
IPR009081Phosphopantetheine binding ACP domainGENE3DG3DSA:1.10.1200.10coord: 38..125
score: 9.5
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 63..107
score: 6.5
IPR009081Phosphopantetheine binding ACP domainPROFILEPS50075ACP_DOMAINcoord: 78..120
score: 1
IPR009081Phosphopantetheine binding ACP domainunknownSSF47336ACP-likecoord: 47..121
score: 1.01
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..125
score: 8.0
NoneNo IPR availablePANTHERPTHR20863:SF30SUBFAMILY NOT NAMEDcoord: 1..125
score: 8.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g02430Cucsa.256950Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g02430CmaCh00G004630Cucurbita maxima (Rimu)cmacpeB018
Cp4.1LG08g02430CmaCh14G019350Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g02430CmaCh06G011740Cucurbita maxima (Rimu)cmacpeB854
Cp4.1LG08g02430CmoCh06G012130Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g02430CmoCh14G019910Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g02430Cla021373Watermelon (97103) v1cpewmB845
Cp4.1LG08g02430Csa3G128840Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g02430MELO3C006263Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g02430ClCG05G002860Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g02430CSPI03G10250Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g02430Lsi05G018950Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g02430MELO3C006263.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g02430CsaV3_3G010390Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g02430Bhi01G000112Wax gourdcpewgoB1111
Cp4.1LG08g02430CsGy3G010360Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g02430Carg06333Silver-seed gourdcarcpeB1333
Cp4.1LG08g02430Carg14887Silver-seed gourdcarcpeB0885
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g02430Cp4.1LG03g17590Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g02430Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g02430Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g02430Cucurbita pepo (Zucchini)cpecpeB344
Cp4.1LG08g02430Cucumber (Gy14) v1cgycpeB0969
Cp4.1LG08g02430Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g02430Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g02430Wild cucumber (PI 183967)cpecpiB879
Cp4.1LG08g02430Cucumber (Chinese Long) v2cpecuB877
Cp4.1LG08g02430Watermelon (Charleston Gray)cpewcgB790
Cp4.1LG08g02430Watermelon (97103) v1cpewmB854
Cp4.1LG08g02430Melon (DHL92) v3.5.1cpemeB791
Cp4.1LG08g02430Cucumber (Gy14) v2cgybcpeB889
Cp4.1LG08g02430Melon (DHL92) v3.6.1cpemedB932
Cp4.1LG08g02430Silver-seed gourdcarcpeB0329
Cp4.1LG08g02430Silver-seed gourdcarcpeB1507
Cp4.1LG08g02430Cucumber (Chinese Long) v3cpecucB1077
Cp4.1LG08g02430Wax gourdcpewgoB1097