CmaCh06G011740 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G011740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionAcyl carrier protein
LocationCma_Chr06 : 7909695 .. 7912377 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAGAACAGAAAAAAAAAATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTCCGATTCTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGTTCCGCTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGTCCAAGGAGGAGGTTATTGAGAGAGTCCTCTCGGTTGTGAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGATTCGATCTTGTCCCTCCATTTCACTTGTTTTTTCAGCTTATTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTCAAGTCTGTTGGAACGTCTTTTGTTGATTTGGGAATGCGGGAAGAATAGGTTGAAAGTGTAGTAATTCTGTAATATGCCGATTCAATAGTTAAATGTTCTGATGTGCGATCCCGGTGGATTTTGAATCGTTTGCATGATTTAATTACTATGCTTTATCTGTGCGAATGGAAAATTGGGGCAAACCATAACTAACGACGATTTATTCCCTGATCAAGCGTTAATCTAGAATGTGGAACTTAATAATTTTTGCTGAAATGCCATTTGTTTAATATTTGATTCGGCATCTTTTGGAAATTTAACTTTTTGGCTGAAAGTCTGGGTCGATTGCCGTATTGCACACACTGTACCTTCGTTTATGTGGATTGCTTGGCTAGGTTCTCTAGGATTATAACTATTGACACCTACATTTCTTGAATTCGCGGAGGTGAACTGCTTGGCTAGGTTCTCTAGGATTATAACTATTGACACCTACATTTCTTGAATTCGCGGAGGTGAACGGTTTCTAATCTTACACATTTTGGGTGTATATTGACACCTACATTTCTTGAATTCGCGGAGGTGAACGGTTTCTAATCTTACACATTTTGGGTGTAATCGATGATAGATGACAAATCATTAATTGCCAATGGGTGGTTATCTCAATTTTAATGATGCATCTTGGCTGGTGTATGCCAAGCAACCTCACTCAGACAGTGTCCGTGTGCATCTTGCTGCTCTTTTTATCTTGGCTGGTGTATGCCAAGCAACCTCACTCAGACAGTGTCCGTGTGCATCTTGCTGCTCTTTTTGTGATGTCTATATCTGTTTAGGTTGGACACTATAATGCTTTTCTCCTTCGCTTTATTGCACATAGACATAAAACTGTCTTTCTCTTATCCTGTTCTTCCTCTTTTGCTCCCTTTTTTAGCCAACATATCATATCTACTTCTTATTCGTCTTCTTTTGCCTTTTTGCCTTTTTGTTTTTTCTCTTGTGTCAATTTGTGTATCTACTTCTTATTCGTCTTCTTTTGCCTTTTTGCCTTTTTGTTTTTTCTCTTGTGTCAATTTGTGTACGATCAATCTTATAGATTGTTATGTCGTTTACTCAAAAGATGTATTTTCTCATCTCACTTGTCCCAGGCGTTATTTTCATATTGCTCTTAGTCTCCAAAGAACTTTTGTTAACATATTCCTTTTGGTCTCCCAGGCGTTATTTTCATATTGCTCTTAGTCTCCAAAGAACTTTTGTTAACATATTCCTTTTGGTCTTTTGATCACTGAATTGTGGTTTACCTCCTTATGACTTGACCTTATCGTGTTGTATTCCCAACGTATCCCCGAGAACCAGGCTATGCTATAGTAGATATTACACACTTTTTTGAGATATTCCCAAGAACTCGGCTATGCCATATAGTGAATATTACAAGTAGATATTACACACTTTTTTGAGATATTCCCAAGAACTCGGCTATGCCATATAGTGAATATTACACTCATTTTCGAGCCATCTTAAGTTAGGAATGATCAAAAGCAGCTAAACTATGTCACCCAGTTTCTACTATTAATTTTTCTGTCACTTCCAAGCAGCATCTCTTCCCTACTATACTTCAATTATAGCTTTTCTACTATTAATTTTTCTGTCACTTCCAAGCAGCATCTCTTCCCTACTATACTTCAATTATAGCTTGGCTGAAATGTTGCTGCAATTATTGGGTTTTCCGCTATTTATCTGCAGGTGAGCCCTGATGGTCATTTCCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCCTGGAAGAGGAGTTCAAGCTAGAGATTCCAGACAAGGAGGCTGATAAAATCGATTCCTGTAATCTTGCAATCGAGTACGTATACAACCATCCAATGGCTAGTTGACAAAGTACTAGCATCTTTCTCTTTATTTCTTTTTTGGTTTTTTGGAGTATGTTATCGAGCCAATGAATATTCATCTCTACATCGTTGTTTCGACCCTTCTTGGATGCTTGTCAAGAGTCGTGTTCTTCACACCGTGATGAAAAATAATTGCAACTGCCTGGAACATAAATCATTGTGTCCAGACAAATTTTCAGGGCGTACAATGGTTCTAACTTTAAGCACTTGCTTGCTATGCATCTTAATATCTGTGGCATCTTTTTCATAGGTAATCAGATTGTTTGATTTCAAAGTTTGATCTTCTCTTCTAAATTGCTTTTATTCAGAATAGACTGGTTCATCCTTAAGCTGTTGATACTTGGTAGGTTTTTTACTTAGGGATCTCAAGGAGATATTGTTTTGTCTTCAAAGTTCTGATATAAATGTGACCATTTTTCCTTGTGCTTTTTTG

mRNA sequence

AGGAAGAACAGAAAAAAAAAATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTCCGATTCTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGTTCCGCTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGTCCAAGGAGGAGGTTATTGAGAGAGTCCTCTCGGTTGTGAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGAGCCCTGATGGTCATTTCCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCCTGGAAGAGGAGTTCAAGCTAGAGATTCCAGACAAGGAGGCTGATAAAATCGATTCCTGTAATCTTGCAATCGAGTACGTATACAACCATCCAATGGCTAGTTGACAAAGTACTAGCATCTTTCTCTTTATTTCTTTTTTGGTTTTTTGGAGTATGTTATCGAGCCAATGAATATTCATCTCTACATCGTTGTTTCGACCCTTCTTGGATGCTTGTCAAGAGTCGTGTTCTTCACACCGTGATGAAAAATAATTGCAACTGCCTGGAACATAAATCATTGTGTCCAGACAAATTTTCAGGGCGTACAATGGTTCTAACTTTAAGCACTTGCTTGCTATGCATCTTAATATCTGTGGCATCTTTTTCATAGGTAATCAGATTGTTTGATTTCAAAGTTTGATCTTCTCTTCTAAATTGCTTTTATTCAGAATAGACTGGTTCATCCTTAAGCTGTTGATACTTGGTAGGTTTTTTACTTAGGGATCTCAAGGAGATATTGTTTTGTCTTCAAAGTTCTGATATAAATGTGACCATTTTTCCTTGTGCTTTTTTG

Coding sequence (CDS)

ATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTCCGATTCTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGTTCCGCTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGTCCAAGGAGGAGGTTATTGAGAGAGTCCTCTCGGTTGTGAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGAGCCCTGATGGTCATTTCCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCCTGGAAGAGGAGTTCAAGCTAGAGATTCCAGACAAGGAGGCTGATAAAATCGATTCCTGTAATCTTGCAATCGAGTACGTATACAACCATCCAATGGCTAGTTGA

Protein sequence

MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVYNHPMAS
Homology
[Close]
BLAST of CmaCh06G011740 vs. Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-42
Identity = 89/126 (70.63%), Postives = 104/126 (82.54%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALR A+LRH+RVPV+   L + +         ++R FSSHDDHLS+E V++RVL VVK 
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIG----FLGTIRSFSSHDDHLSREAVVDRVLDVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPSKV+P+ HFQ DLGLDSLDTVEIVMA+EEEFKLEIPDKEADKIDSC+LAIEYVY
Sbjct: 61  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 120

Query: 121 NHPMAS 127
           NHPM+S
Sbjct: 121 NHPMSS 122

[Close]
BLAST of CmaCh06G011740 vs. Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.3e-26
Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQ-PASCSAASLRLFSSH--DDHLSKEEVIERVLSV 60
           MA R A+LR++RV V       REC  P S     LR FS       L K EV +RVLSV
Sbjct: 1   MAARGAMLRYLRVNVNPTIQNPRECVLPFSIL---LRRFSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIE 120
           VK   KVDPSKV+P  +FQ DLGLDSLD+VE+VMALEEEF  EIPD EADKI S +LA++
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 YVYNHPMA 126
           ++ +HP A
Sbjct: 121 FIASHPQA 125

[Close]
BLAST of CmaCh06G011740 vs. Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 56/124 (45.16%), Postives = 74/124 (59.68%), Query Frame = 1 

Query: 4   RAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKCHPK 63
           R AV   VR  V   A  +   + A+  A     F S   HL K+EV  R+  V+    K
Sbjct: 14  RPAVASAVRAGVARPAFVQAVPKVAAFQAVR---FYSAGGHLKKDEVFSRIAQVLSGFDK 73

Query: 64  V-DPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVYNH 123
           V DP  ++   HF  DLGLDSLDTVE+VMA+EEEF +EIPDK+AD+I S + A+EY+ + 
Sbjct: 74  VNDPKNITETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQ 133

Query: 124 PMAS 127
           P A+
Sbjct: 134 PDAN 134

[Close]
BLAST of CmaCh06G011740 vs. Swiss-Prot
Match: ACPM_YEAST (Acyl carrier protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACP1 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-15
Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 1 

Query: 12  RVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKCHPKVDPS---- 71
           R+  R    A R     S  + ++     +  +LSK++V +RV+ V+K   K  P+    
Sbjct: 7   RISSRVAPSAYRTIMGRSVMSNTILAQRFYSANLSKDQVSQRVIDVIKAFDKNSPNIANK 66

Query: 72  KVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVYNHPMAS 127
           ++S D  F KDLGLDSLDTVE+++A+EEEF +EIPDK AD++ S    ++Y+ ++P A+
Sbjct: 67  QISSDTQFHKDLGLDSLDTVELLVAIEEEFDIEIPDKVADELRSVGETVDYIASNPDAN 125

[Close]
BLAST of CmaCh06G011740 vs. Swiss-Prot
Match: ACPM_SCHPO (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-15
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 1 

Query: 45  LSKEEVIERVLSVVKCHPKV-DPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPD 104
           +++ +  +R+L VV    K+ DP KV+P   F  DLGLDSLD VE+VMA+EEEF ++IPD
Sbjct: 30  VARPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPD 89

Query: 105 KEADKIDSCNLAIEYVYNHPMA 126
           K+AD+I S   AI Y+  +P A
Sbjct: 90  KDADEITSVGDAISYITKNPEA 111

[Close]
BLAST of CmaCh06G011740 vs. TrEMBL
Match: A0A0A0L986_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128860 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.0e-58
Identity = 114/126 (90.48%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F+ALARRECQP  CS  SLRLFSSHDDHL+K+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmaCh06G011740 vs. TrEMBL
Match: A0A0A0L3Y9_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128850 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-52
Identity = 109/126 (86.51%), Postives = 113/126 (89.68%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPVRF ALARRECQP  CS  SLRLFSS DD  +KEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVRFSALARRECQPTPCSGGSLRLFSSQDDQSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVNPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmaCh06G011740 vs. TrEMBL
Match: A0A0A0L6L3_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128840 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.8e-49
Identity = 103/126 (81.75%), Postives = 110/126 (87.30%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAV+RH+RVPV+F ALARREC    CS   LRLFSSHDD  +KEEV ERVLSV+K 
Sbjct: 1   MALRAAVIRHLRVPVQFSALARRECHATQCSVEFLRLFSSHDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           H KVDPSKVSP+ HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKI SC+LAIEYVY
Sbjct: 61  HQKVDPSKVSPNVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIASCDLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmaCh06G011740 vs. TrEMBL
Match: W9R594_9ROSA (Acyl carrier protein OS=Morus notabilis GN=L484_023903 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-46
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFAL-ARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVK 60
           MALR+A+LRHVRVPV+   L ARR  QP   S   LR  SSHDDHL+KEEVI+RVLSVVK
Sbjct: 1   MALRSALLRHVRVPVQTLTLTARRFDQPLRASTTLLRWMSSHDDHLTKEEVIDRVLSVVK 60

Query: 61  CHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYV 120
             PKVDPSKVSPD HF+KDLGLDSLD+VEIVMALEEEFKLEIPDKEADKIDSCNLAIEY+
Sbjct: 61  SFPKVDPSKVSPDVHFEKDLGLDSLDSVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYI 120

Query: 121 YNHPMAS 127
           YNHPMA+
Sbjct: 121 YNHPMAA 127

[Close]
BLAST of CmaCh06G011740 vs. TrEMBL
Match: B9GP46_POPTR (Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0002s13660g PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.5e-45
Identity = 95/126 (75.40%), Postives = 108/126 (85.71%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+   L    C P+     S+RL SSHDDHL+KEEV++RV+SVVK 
Sbjct: 1   MALRAAVLRHIRVPVQTLRLKTNPCAPSG----SVRLMSSHDDHLTKEEVVDRVVSVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPS+VSP+ HFQKDLGLDSLD VEIVMALEEEFKLEIPDKEADKIDSCNLAIEY++
Sbjct: 61  FPKVDPSRVSPEVHFQKDLGLDSLDNVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYIH 120

Query: 121 NHPMAS 127
           NHP+AS
Sbjct: 121 NHPLAS 122

[Close]
BLAST of CmaCh06G011740 vs. TAIR10
Match: AT2G44620.1 (AT2G44620.1 mitochondrial acyl carrier protein 1)

HSP 1 Score: 173.7 bits (439), Expect = 7.1e-44
Identity = 89/126 (70.63%), Postives = 104/126 (82.54%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALR A+LRH+RVPV+   L + +         ++R FSSHDDHLS+E V++RVL VVK 
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIG----FLGTIRSFSSHDDHLSREAVVDRVLDVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPSKV+P+ HFQ DLGLDSLDTVEIVMA+EEEFKLEIPDKEADKIDSC+LAIEYVY
Sbjct: 61  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 120

Query: 121 NHPMAS 127
           NHPM+S
Sbjct: 121 NHPMSS 122

[Close]
BLAST of CmaCh06G011740 vs. TAIR10
Match: AT1G65290.1 (AT1G65290.1 mitochondrial acyl carrier protein 2)

HSP 1 Score: 118.2 bits (295), Expect = 3.6e-27
Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQ-PASCSAASLRLFSSH--DDHLSKEEVIERVLSV 60
           MA R A+LR++RV V       REC  P S     LR FS       L K EV +RVLSV
Sbjct: 1   MAARGAMLRYLRVNVNPTIQNPRECVLPFSIL---LRRFSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIE 120
           VK   KVDPSKV+P  +FQ DLGLDSLD+VE+VMALEEEF  EIPD EADKI S +LA++
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 YVYNHPMA 126
           ++ +HP A
Sbjct: 121 FIASHPQA 125

[Close]
BLAST of CmaCh06G011740 vs. TAIR10
Match: AT5G47630.1 (AT5G47630.1 mitochondrial acyl carrier protein 3)

HSP 1 Score: 78.2 bits (191), Expect = 4.1e-15
Identity = 45/119 (37.82%), Postives = 74/119 (62.18%), Query Frame = 1 

Query: 3   LRAAVLRHVR--VPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 62
           +R+++L+H+R  V VR  +L + E    S    +    ++ D    +++++ RV+ +VK 
Sbjct: 4   IRSSILQHLRLRVSVRPTSLLQNENGFKSIGIFNFTSEAAADG--GQDQILSRVIELVKK 63

Query: 63  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYV 120
           + K + S+V+    FQKDL LDSLD  E+VMA+EEEF +EIPD++ADK+  C     Y+
Sbjct: 64  YDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYI 120

[Close]
BLAST of CmaCh06G011740 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 58.5 bits (140), Expect = 3.3e-09
Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 1 

Query: 46  SKEEVIERVLSVVKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKE 105
           +K+E IE+V ++VK    + P K         DLG DSLDTVEIVM LEEEF +++ +++
Sbjct: 56  AKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEK 115

Query: 106 ADKIDSCNLAIEYV 120
           A KI +   A E +
Sbjct: 116 AQKIATVEQAAELI 129

[Close]
BLAST of CmaCh06G011740 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 51.2 bits (121), Expect = 5.3e-07
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1 

Query: 47  KEEVIERVLSVVKCHPKV-DPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKE 106
           K+E +E+V  +VK    + D  KV+    F  +LG DSLDTVEIVM LEEEF + + ++ 
Sbjct: 58  KQETVEKVSEIVKKQLSLTDDQKVTAGTKFT-ELGADSLDTVEIVMGLEEEFGITMAEER 117

Query: 107 ADKIDSCNLAIEYV 120
           A +I +   A E +
Sbjct: 118 AKEIATVQQAAELI 130

[Close]
BLAST of CmaCh06G011740 vs. NCBI nr
Match: gi|778677673|ref|XP_011650836.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 2.8e-58
Identity = 114/126 (90.48%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F+ALARRECQP  CS  SLRLFSSHDDHL+K+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmaCh06G011740 vs. NCBI nr
Match: gi|659075680|ref|XP_008438272.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 232.6 bits (592), Expect = 3.7e-58
Identity = 113/126 (89.68%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F+ALARRECQP  CS  SLRLFSSHDDH++K+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTPCSGGSLRLFSSHDDHMTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmaCh06G011740 vs. NCBI nr
Match: gi|778677670|ref|XP_011650835.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.8e-52
Identity = 109/126 (86.51%), Postives = 113/126 (89.68%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPVRF ALARRECQP  CS  SLRLFSS DD  +KEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVRFSALARRECQPTPCSGGSLRLFSSQDDQSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVNPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmaCh06G011740 vs. NCBI nr
Match: gi|659075678|ref|XP_008438270.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 5.1e-52
Identity = 108/126 (85.71%), Postives = 113/126 (89.68%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F ALARRECQP  CS  SLRLFSS DD  +KEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVQFSALARRECQPTPCSGGSLRLFSSQDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVTPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmaCh06G011740 vs. NCBI nr
Match: gi|659075676|ref|XP_008438269.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 2.0e-51
Identity = 107/126 (84.92%), Postives = 114/126 (90.48%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRFFALARRECQPASCSAASLRLFSSHDDHLSKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+F ALARRECQPA CS   LRLFSSHDD  +KEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVQFSALARRECQPAPCSDGYLRLFSSHDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           H KVDPSKVSP+ HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSC+LAIEYVY
Sbjct: 61  HTKVDPSKVSPNVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCDLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMA+
Sbjct: 121 NHPMAN 126

The following BLAST results are available for this feature:
BLAST of CmaCh06G011740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACPM1_ARATH1.3e-4270.63Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=... [more]
ACPM2_ARATH6.3e-2656.25Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=... [more]
ACPM_NEUCR1.3e-1845.16Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74... [more]
ACPM_YEAST1.7e-1538.66Acyl carrier protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204... [more]
ACPM_SCHPO2.3e-1550.00Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strai... [more]
BLAST of CmaCh06G011740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L986_CUCSA2.0e-5890.48Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128860 PE=3 SV=1[more]
A0A0A0L3Y9_CUCSA1.2e-5286.51Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128850 PE=3 SV=1[more]
A0A0A0L6L3_CUCSA4.8e-4981.75Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128840 PE=3 SV=1[more]
W9R594_9ROSA1.7e-4679.53Acyl carrier protein OS=Morus notabilis GN=L484_023903 PE=3 SV=1[more]
B9GP46_POPTR5.5e-4575.40Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0002s13660g PE=3 SV=1[more]
BLAST of CmaCh06G011740 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44620.17.1e-4470.63 mitochondrial acyl carrier protein 1[more]
AT1G65290.13.6e-2756.25 mitochondrial acyl carrier protein 2[more]
AT5G47630.14.1e-1537.82 mitochondrial acyl carrier protein 3[more]
AT3G05020.13.3e-0943.24 acyl carrier protein 1[more]
AT5G27200.15.3e-0741.89 acyl carrier protein 5[more]
BLAST of CmaCh06G011740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778677673|ref|XP_011650836.1|2.8e-5890.48PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus][more]
gi|659075680|ref|XP_008438272.1|3.7e-5889.68PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
gi|778677670|ref|XP_011650835.1|1.8e-5286.51PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus][more]
gi|659075678|ref|XP_008438270.1|5.1e-5285.71PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
gi|659075676|ref|XP_008438269.1|2.0e-5184.92PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003231Acyl_carrier
IPR006162Ppantetheine_attach_site
IPR009081PP-bd_ACP
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0051607 defense response to virus
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G011740.1CmaCh06G011740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 87..122
score: 5.0
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 49..123
score: 17
IPR003231Acyl carrier protein (ACP)TIGRFAMsTIGR00517TIGR00517coord: 48..122
score: 9.6
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 78..93
scor
IPR009081Phosphopantetheine binding ACP domainGENE3DG3DSA:1.10.1200.10coord: 38..125
score: 8.4
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 63..107
score: 6.5
IPR009081Phosphopantetheine binding ACP domainPROFILEPS50075ACP_DOMAINcoord: 78..120
score: 1
IPR009081Phosphopantetheine binding ACP domainunknownSSF47336ACP-likecoord: 47..121
score: 1.16
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..125
score: 4.9
NoneNo IPR availablePANTHERPTHR20863:SF30SUBFAMILY NOT NAMEDcoord: 1..125
score: 4.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G011740Cucsa.256950Cucumber (Gy14) v1cgycmaB0727
CmaCh06G011740Cla021373Watermelon (97103) v1cmawmB798
CmaCh06G011740Csa3G128840Cucumber (Chinese Long) v2cmacuB814
CmaCh06G011740MELO3C006263Melon (DHL92) v3.5.1cmameB763
CmaCh06G011740ClCG05G002860Watermelon (Charleston Gray)cmawcgB737
CmaCh06G011740CSPI03G10250Wild cucumber (PI 183967)cmacpiB826
CmaCh06G011740CmoCh06G012130Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G011740CmoCh14G019910Cucurbita moschata (Rifu)cmacmoB797
CmaCh06G011740Lsi05G018950Bottle gourd (USVL1VR-Ls)cmalsiB764
CmaCh06G011740Cp4.1LG03g17590Cucurbita pepo (Zucchini)cmacpeB837
CmaCh06G011740Cp4.1LG08g02430Cucurbita pepo (Zucchini)cmacpeB854
CmaCh06G011740MELO3C006263.2Melon (DHL92) v3.6.1cmamedB863
CmaCh06G011740CsaV3_3G010390Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G011740Cla97C05G083450Watermelon (97103) v2cmawmbB856
CmaCh06G011740Bhi01G000112Wax gourdcmawgoB1007
CmaCh06G011740CsGy3G010360Cucumber (Gy14) v2cgybcmaB427
CmaCh06G011740Carg06333Silver-seed gourdcarcmaB1325
CmaCh06G011740Carg14887Silver-seed gourdcarcmaB0877
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh06G011740CmaCh00G004630Cucurbita maxima (Rimu)cmacmaB021
CmaCh06G011740CmaCh14G019350Cucurbita maxima (Rimu)cmacmaB285
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G011740Cucumber (Chinese Long) v3cmacucB0996
CmaCh06G011740Watermelon (97103) v2cmawmbB864
CmaCh06G011740Wax gourdcmawgoB1004
CmaCh06G011740Cucurbita maxima (Rimu)cmacmaB370
CmaCh06G011740Cucumber (Gy14) v1cgycmaB1007
CmaCh06G011740Cucurbita moschata (Rifu)cmacmoB811
CmaCh06G011740Cucurbita moschata (Rifu)cmacmoB837
CmaCh06G011740Wild cucumber (PI 183967)cmacpiB856
CmaCh06G011740Cucumber (Chinese Long) v2cmacuB841
CmaCh06G011740Melon (DHL92) v3.5.1cmameB748
CmaCh06G011740Watermelon (Charleston Gray)cmawcgB744
CmaCh06G011740Watermelon (97103) v1cmawmB810
CmaCh06G011740Cucurbita pepo (Zucchini)cmacpeB811
CmaCh06G011740Bottle gourd (USVL1VR-Ls)cmalsiB743
CmaCh06G011740Cucumber (Gy14) v2cgybcmaB853
CmaCh06G011740Melon (DHL92) v3.6.1cmamedB848
CmaCh06G011740Silver-seed gourdcarcmaB0317
CmaCh06G011740Silver-seed gourdcarcmaB1494