CmoCh06G012130 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G012130
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionAcyl carrier protein
LocationCmo_Chr06 : 9237700 .. 9239779 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTGCAGGAAGAAGAGATAAAAAATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTTCGAGTTTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGTTCCGTTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGACCAAGGAGGAGGTTATTGAGAGAGTCCTCTCGGTTGTCAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGATTCGGTCTTATACCTCCATCACTTGTTTTTTCAGCTTATTGAGTTGTTTTTTCAAGACTGTTGAAACGGCTTTTGTTGATTTGGGAATGCGGAATAATAGGTTGAAAGTGTAGAAATTCTGTAATATGCCGATTCAATAGTTTAATGTTCTGATGTGCGATCCTGGTGGATTCCGAATCGTTTTTATGGTTTAATCTCCTATGCTTTATCTGTGCGAATGGAAAATTGGGGCAAACCATAACTCACGACGATATATTCCCTGATCAAGCGTTAATCTAGAATGTGGAACTTGATAATTTTTGCTGAAATGCCATTTGATTTAATATTTGATTCGGCATCTTTTGGAAATTTAACTTCTTGGCTGAAAGTTTGGGTCGATTGCCGTATTGCACACAATATATCTCCCTTCGTTTATGTGGATTGCTTGGCTAGGTTCACTAGGACTAACTATTGACACCTAAATTTCTTGAATTCGCGGAGGTCAACGGTTTCTAATCTTACACATTTTGGGTATAGTCGATGATAGATGACAAATCATTAATTGCCAAAGGGTGGTTATATCAATTTTAAGGATGCATCTTGGCTGGTGTATGCCAAGCAAGCTCACTCAGACAGTGTACGAGTGCATCTTGCTGCTCTTTTTGTGATGTCTATATCATTTTAGTTTGGACACTTCAATGCTGTTCTCCTTCACTTTATTGCACACAGACATAAAATTGTCTCTCTTATCTTGTTCTTCCTCTTTTGCTCCCTTTTGTTCGCCAACATATCATATCTACTTCTTCTTCGTCTTCTTTTGCCTTTTTGTTTTTTCTTTTGTGTCAATTTGTGTATAATCAATCTTATAGATTGTAACCCGTTTACTCAAAAGATGTATTTTCTCATCTCACTTGTCCCAGGCGTTATTTTCATATTGCTCTTAGACTCCAAAGAACTTTTGCTAACATATTCCTTTTGGTCTTTTGATCACTGGATTGTGGTTTACCTCCTTATGACTTGACCTTAACGTGTTGTATTCCTAACGTATCCCCGAGAACCAGGCTATGCTATAGTAGATATTACACACTTTTTTGAGATATTCCCAAGAACTCGGCTATGCCATATAGTGAATATTACACTCATTTTCGAGCCATTTTAAGGTTAGAAACGATCAAAAGCAGCTAAACTATGTCGCCCAGTTTCTACTATTAATTTTTTGTCACTTCCAAGCATCATCTCTTCCCCACTAAACTTCAATCATAGCTTTTGGCTGAAATGTTGCTGCAATTATTGGGTTTTCCGTTATTTATCTGCAGGTGAGCCCTGATGGTCATTTTCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCTTGGAAGAGGAGTTCAAGCTAGAGATCCCAGACAAGGAGGCTGATAAAATAGATTCCTGTAATCTTGCAATTGAGTACGTATACAACCATCCAATGGCTAGTTGACAAAGTACTAGCATCTTTCTCTTTATTTCTTTTTTGGTTTTTTGGAGTATGTTATCGAGCCAATGAATATTCATCTCTACATCGTTGTTTCGAGCCTTCTTGGACGCTTGTCAAGAGTCGTGTTCTTCACACCGTGATGAAAAATAATTGCAACTGCTTGGAACATAAATCATTGTGTCCAGACAAATTTTTAGGGCGTACAATGGTTCTAACTTTAAGCACTTGCTTGCTATGCATCTTAATATCTGTGGCATCTTTTTCATAGGTAATCAGATTGTTTGATTTCAAAGTTTGATCTTCTCTTCTAAATTGCTTCTATACAGAACAGACTGGTTCTACCTTAAGCTGTTGATACTTGGTAGCTTTTTTACTTAGG

mRNA sequence

CACTGCAGGAAGAAGAGATAAAAAATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTTCGAGTTTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGTTCCGTTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGACCAAGGAGGAGGTTATTGAGAGAGTCCTCTCGGTTGTCAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGAGCCCTGATGGTCATTTTCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCTTGGAAGAGGAGTTCAAGCTAGAGATCCCAGACAAGGAGGCTGATAAAATAGATTCCTGTAATCTTGCAATTGAGTACGTATACAACCATCCAATGGCTAGTTGACAAAGTACTAGCATCTTTCTCTTTATTTCTTTTTTGGTTTTTTGGAGTATGTTATCGAGCCAATGAATATTCATCTCTACATCGTTGTTTCGAGCCTTCTTGGACGCTTGTCAAGAGTCGTGTTCTTCACACCGTGATGAAAAATAATTGCAACTGCTTGGAACATAAATCATTGTGTCCAGACAAATTTTTAGGGCGTACAATGGTTCTAACTTTAAGCACTTGCTTGCTATGCATCTTAATATCTGTGGCATCTTTTTCATAGGTAATCAGATTGTTTGATTTCAAAGTTTGATCTTCTCTTCTAAATTGCTTCTATACAGAACAGACTGGTTCTACCTTAAGCTGTTGATACTTGGTAGCTTTTTTACTTAGG

Coding sequence (CDS)

ATGGCACTGAGGGCAGCCGTTCTTCGCCATGTTCGAGTTCCAGTTCGAGTTTTTGCCCTAGCTCGCCGAGAATGCCAACCGGCGTCGTGTTCCGTTGCGTCGCTCCGGCTATTTTCATCGCACGATGATCACTTGACCAAGGAGGAGGTTATTGAGAGAGTCCTCTCGGTTGTCAAGTGCCATCCGAAAGTCGATCCGTCCAAGGTGAGCCCTGATGGTCATTTTCAGAAAGATTTGGGTTTAGACAGCTTGGACACTGTGGAGATTGTAATGGCCTTGGAAGAGGAGTTCAAGCTAGAGATCCCAGACAAGGAGGCTGATAAAATAGATTCCTGTAATCTTGCAATTGAGTACGTATACAACCATCCAATGGCTAGTTGA
Homology
[Close]
BLAST of CmoCh06G012130 vs. Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 9.7e-43
Identity = 88/126 (69.84%), Postives = 105/126 (83.33%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALR A+LRH+RVPV+   L + +       + ++R FSSHDDHL++E V++RVL VVK 
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIG----FLGTIRSFSSHDDHLSREAVVDRVLDVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPSKV+P+ HFQ DLGLDSLDTVEIVMA+EEEFKLEIPDKEADKIDSC+LAIEYVY
Sbjct: 61  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 120

Query: 121 NHPMAS 127
           NHPM+S
Sbjct: 121 NHPMSS 122

[Close]
BLAST of CmoCh06G012130 vs. Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.8e-26
Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQ-PASCSVASLRLFSSH--DDHLTKEEVIERVLSV 60
           MA R A+LR++RV V       REC  P S     LR FS       L K EV +RVLSV
Sbjct: 1   MAARGAMLRYLRVNVNPTIQNPRECVLPFSIL---LRRFSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIE 120
           VK   KVDPSKV+P  +FQ DLGLDSLD+VE+VMALEEEF  EIPD EADKI S +LA++
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 YVYNHPMA 126
           ++ +HP A
Sbjct: 121 FIASHPQA 125

[Close]
BLAST of CmoCh06G012130 vs. Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18
Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 1 

Query: 4   RAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKCHPK 63
           R AV   VR  V   A    +  P   +  ++R +S+   HL K+EV  R+  V+    K
Sbjct: 14  RPAVASAVRAGVARPAFV--QAVPKVAAFQAVRFYSA-GGHLKKDEVFSRIAQVLSGFDK 73

Query: 64  V-DPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVYNH 123
           V DP  ++   HF  DLGLDSLDTVE+VMA+EEEF +EIPDK+AD+I S + A+EY+ + 
Sbjct: 74  VNDPKNITETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQ 133

Query: 124 PMAS 127
           P A+
Sbjct: 134 PDAN 134

[Close]
BLAST of CmoCh06G012130 vs. Swiss-Prot
Match: ACPM_YEAST (Acyl carrier protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACP1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-15
Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 1 

Query: 12  RVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKCHPKVDPS---- 71
           R+  RV   A R     S    ++     +  +L+K++V +RV+ V+K   K  P+    
Sbjct: 7   RISSRVAPSAYRTIMGRSVMSNTILAQRFYSANLSKDQVSQRVIDVIKAFDKNSPNIANK 66

Query: 72  KVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVYNHPMAS 127
           ++S D  F KDLGLDSLDTVE+++A+EEEF +EIPDK AD++ S    ++Y+ ++P A+
Sbjct: 67  QISSDTQFHKDLGLDSLDTVELLVAIEEEFDIEIPDKVADELRSVGETVDYIASNPDAN 125

[Close]
BLAST of CmoCh06G012130 vs. Swiss-Prot
Match: ACP_SYNY3 (Acyl carrier protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=acpP PE=1 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-15
Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 1 

Query: 48  EEVIERVLSVVKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEAD 107
           +E+ E+V  +V    +VDP KV+PD  F +DLG DSLDTVE+VMALEEEF +EIPD+ A+
Sbjct: 3   QEIFEKVKKIVVEQLEVDPDKVTPDATFAEDLGADSLDTVELVMALEEEFDIEIPDEVAE 62

Query: 108 KIDSCNLAIEYV 120
            ID+   A+E++
Sbjct: 63  TIDTVGKAVEHI 74

[Close]
BLAST of CmoCh06G012130 vs. TrEMBL
Match: A0A0A0L986_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128860 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 9.7e-58
Identity = 114/126 (90.48%), Postives = 120/126 (95.24%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+ +ALARRECQP  CS  SLRLFSSHDDHLTK+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmoCh06G012130 vs. TrEMBL
Match: A0A0A0L3Y9_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128850 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 6.1e-52
Identity = 109/126 (86.51%), Postives = 112/126 (88.89%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPVR  ALARRECQP  CS  SLRLFSS DD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVRFSALARRECQPTPCSGGSLRLFSSQDDQSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVNPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmoCh06G012130 vs. TrEMBL
Match: A0A0A0L6L3_CUCSA (Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128840 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.7e-49
Identity = 104/126 (82.54%), Postives = 110/126 (87.30%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAV+RH+RVPV+  ALARREC    CSV  LRLFSSHDD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVIRHLRVPVQFSALARRECHATQCSVEFLRLFSSHDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           H KVDPSKVSP+ HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKI SC+LAIEYVY
Sbjct: 61  HQKVDPSKVSPNVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIASCDLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmoCh06G012130 vs. TrEMBL
Match: W9R594_9ROSA (Acyl carrier protein OS=Morus notabilis GN=L484_023903 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-47
Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFAL-ARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVK 60
           MALR+A+LRHVRVPV+   L ARR  QP   S   LR  SSHDDHLTKEEVI+RVLSVVK
Sbjct: 1   MALRSALLRHVRVPVQTLTLTARRFDQPLRASTTLLRWMSSHDDHLTKEEVIDRVLSVVK 60

Query: 61  CHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYV 120
             PKVDPSKVSPD HF+KDLGLDSLD+VEIVMALEEEFKLEIPDKEADKIDSCNLAIEY+
Sbjct: 61  SFPKVDPSKVSPDVHFEKDLGLDSLDSVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYI 120

Query: 121 YNHPMAS 127
           YNHPMA+
Sbjct: 121 YNHPMAA 127

[Close]
BLAST of CmoCh06G012130 vs. TrEMBL
Match: A0A0M4BXN3_JATCU (Acyl carrier protein OS=Jatropha curcas PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.8e-46
Identity = 99/126 (78.57%), Postives = 109/126 (86.51%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAA+LRHVR+PV+   LA  + QP S  ++S RL SSHDDHLTKE+VI+RVL VVK 
Sbjct: 1   MALRAALLRHVRIPVQTLTLAGHKSQPWSLCISS-RLMSSHDDHLTKEQVIDRVLDVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPSKVSPD HFQKDLGLDSLD VEI+MALEEEFKLEIPDKEA KIDSCNLAIEYVY
Sbjct: 61  FPKVDPSKVSPDVHFQKDLGLDSLDNVEIIMALEEEFKLEIPDKEAVKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMA+
Sbjct: 121 NHPMAA 125

[Close]
BLAST of CmoCh06G012130 vs. TAIR10
Match: AT2G44620.1 (AT2G44620.1 mitochondrial acyl carrier protein 1)

HSP 1 Score: 174.1 bits (440), Expect = 5.5e-44
Identity = 88/126 (69.84%), Postives = 105/126 (83.33%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALR A+LRH+RVPV+   L + +       + ++R FSSHDDHL++E V++RVL VVK 
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIG----FLGTIRSFSSHDDHLSREAVVDRVLDVVKS 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
            PKVDPSKV+P+ HFQ DLGLDSLDTVEIVMA+EEEFKLEIPDKEADKIDSC+LAIEYVY
Sbjct: 61  FPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIEYVY 120

Query: 121 NHPMAS 127
           NHPM+S
Sbjct: 121 NHPMSS 122

[Close]
BLAST of CmoCh06G012130 vs. TAIR10
Match: AT1G65290.1 (AT1G65290.1 mitochondrial acyl carrier protein 2)

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 72/128 (56.25%), Postives = 86/128 (67.19%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQ-PASCSVASLRLFSSH--DDHLTKEEVIERVLSV 60
           MA R A+LR++RV V       REC  P S     LR FS       L K EV +RVLSV
Sbjct: 1   MAARGAMLRYLRVNVNPTIQNPRECVLPFSIL---LRRFSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIE 120
           VK   KVDPSKV+P  +FQ DLGLDSLD+VE+VMALEEEF  EIPD EADKI S +LA++
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 YVYNHPMA 126
           ++ +HP A
Sbjct: 121 FIASHPQA 125

[Close]
BLAST of CmoCh06G012130 vs. TAIR10
Match: AT5G47630.1 (AT5G47630.1 mitochondrial acyl carrier protein 3)

HSP 1 Score: 80.5 bits (197), Expect = 8.2e-16
Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 1 

Query: 3   LRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKCHP 62
           +R+++L+H+R+ V V   +  + +    S+      S       +++++ RV+ +VK + 
Sbjct: 4   IRSSILQHLRLRVSVRPTSLLQNENGFKSIGIFNFTSEAAADGGQDQILSRVIELVKKYD 63

Query: 63  KVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYV 120
           K + S+V+    FQKDL LDSLD  E+VMA+EEEF +EIPD++ADK+  C     Y+
Sbjct: 64  KTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYI 120

[Close]
BLAST of CmoCh06G012130 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-09
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1 

Query: 47  KEEVIERVLSVVKCHPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEA 106
           K+E IE+V ++VK    + P K         DLG DSLDTVEIVM LEEEF +++ +++A
Sbjct: 57  KQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEEEFNIQMAEEKA 116

Query: 107 DKIDSCNLAIEYV 120
            KI +   A E +
Sbjct: 117 QKIATVEQAAELI 129

[Close]
BLAST of CmoCh06G012130 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 51.2 bits (121), Expect = 5.3e-07
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1 

Query: 47  KEEVIERVLSVVKCHPKV-DPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKE 106
           K+E +E+V  +VK    + D  KV+    F  +LG DSLDTVEIVM LEEEF + + ++ 
Sbjct: 58  KQETVEKVSEIVKKQLSLTDDQKVTAGTKFT-ELGADSLDTVEIVMGLEEEFGITMAEER 117

Query: 107 ADKIDSCNLAIEYV 120
           A +I +   A E +
Sbjct: 118 AKEIATVQQAAELI 130

[Close]
BLAST of CmoCh06G012130 vs. NCBI nr
Match: gi|778677673|ref|XP_011650836.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 1.4e-57
Identity = 114/126 (90.48%), Postives = 120/126 (95.24%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+ +ALARRECQP  CS  SLRLFSSHDDHLTK+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTLCSGGSLRLFSSHDDHLTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmoCh06G012130 vs. NCBI nr
Match: gi|659075680|ref|XP_008438272.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 230.3 bits (586), Expect = 1.8e-57
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+ +ALARRECQP  CS  SLRLFSSHDDH+TK+EVIERVLSV+KC
Sbjct: 1   MALRAAVLRHLRVPVQFYALARRECQPTPCSGGSLRLFSSHDDHMTKDEVIERVLSVIKC 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKVSPD HF+KDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY
Sbjct: 61  HPKVDPSKVSPDVHFEKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmoCh06G012130 vs. NCBI nr
Match: gi|778677670|ref|XP_011650835.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 8.8e-52
Identity = 109/126 (86.51%), Postives = 112/126 (88.89%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPVR  ALARRECQP  CS  SLRLFSS DD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVRFSALARRECQPTPCSGGSLRLFSSQDDQSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVNPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmoCh06G012130 vs. NCBI nr
Match: gi|659075678|ref|XP_008438270.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 2.5e-51
Identity = 108/126 (85.71%), Postives = 112/126 (88.89%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+  ALARRECQP  CS  SLRLFSS DD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVQFSALARRECQPTPCSGGSLRLFSSQDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           HPKVDPSKV+PD HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSCNLAIEYV 
Sbjct: 61  HPKVDPSKVTPDVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCNLAIEYVC 120

Query: 121 NHPMAS 127
           NHPMAS
Sbjct: 121 NHPMAS 126

[Close]
BLAST of CmoCh06G012130 vs. NCBI nr
Match: gi|659075676|ref|XP_008438269.1| (PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo])

HSP 1 Score: 208.8 bits (530), Expect = 5.7e-51
Identity = 107/126 (84.92%), Postives = 113/126 (89.68%), Query Frame = 1 

Query: 1   MALRAAVLRHVRVPVRVFALARRECQPASCSVASLRLFSSHDDHLTKEEVIERVLSVVKC 60
           MALRAAVLRH+RVPV+  ALARRECQPA CS   LRLFSSHDD  TKEEV ERVLSV+K 
Sbjct: 1   MALRAAVLRHLRVPVQFSALARRECQPAPCSDGYLRLFSSHDDRSTKEEVTERVLSVIKR 60

Query: 61  HPKVDPSKVSPDGHFQKDLGLDSLDTVEIVMALEEEFKLEIPDKEADKIDSCNLAIEYVY 120
           H KVDPSKVSP+ HFQKDLGLDSLDTVEIVMALEEEFKLEIPD EADKIDSC+LAIEYVY
Sbjct: 61  HTKVDPSKVSPNVHFQKDLGLDSLDTVEIVMALEEEFKLEIPDNEADKIDSCDLAIEYVY 120

Query: 121 NHPMAS 127
           NHPMA+
Sbjct: 121 NHPMAN 126

The following BLAST results are available for this feature:
BLAST of CmoCh06G012130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACPM1_ARATH9.7e-4369.84Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=... [more]
ACPM2_ARATH4.8e-2656.25Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=... [more]
ACPM_NEUCR1.3e-1844.35Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74... [more]
ACPM_YEAST2.3e-1538.66Acyl carrier protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204... [more]
ACP_SYNY32.9e-1554.17Acyl carrier protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=acpP PE=... [more]
BLAST of CmoCh06G012130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L986_CUCSA9.7e-5890.48Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128860 PE=3 SV=1[more]
A0A0A0L3Y9_CUCSA6.1e-5286.51Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128850 PE=3 SV=1[more]
A0A0A0L6L3_CUCSA3.7e-4982.54Acyl carrier protein OS=Cucumis sativus GN=Csa_3G128840 PE=3 SV=1[more]
W9R594_9ROSA3.5e-4780.31Acyl carrier protein OS=Morus notabilis GN=L484_023903 PE=3 SV=1[more]
A0A0M4BXN3_JATCU3.8e-4678.57Acyl carrier protein OS=Jatropha curcas PE=2 SV=1[more]
BLAST of CmoCh06G012130 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44620.15.5e-4469.84 mitochondrial acyl carrier protein 1[more]
AT1G65290.12.7e-2756.25 mitochondrial acyl carrier protein 2[more]
AT5G47630.18.2e-1635.90 mitochondrial acyl carrier protein 3[more]
AT3G05020.14.4e-0943.84 acyl carrier protein 1[more]
AT5G27200.15.3e-0741.89 acyl carrier protein 5[more]
BLAST of CmoCh06G012130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778677673|ref|XP_011650836.1|1.4e-5790.48PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus][more]
gi|659075680|ref|XP_008438272.1|1.8e-5789.68PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
gi|778677670|ref|XP_011650835.1|8.8e-5286.51PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis sativus][more]
gi|659075678|ref|XP_008438270.1|2.5e-5185.71PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
gi|659075676|ref|XP_008438269.1|5.7e-5184.92PREDICTED: acyl carrier protein 1, mitochondrial-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003231Acyl_carrier
IPR006162Ppantetheine_attach_site
IPR009081PP-bd_ACP
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0051607 defense response to virus
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G012130.1CmoCh06G012130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 87..122
score: 5.0
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 49..123
score: 17
IPR003231Acyl carrier protein (ACP)TIGRFAMsTIGR00517TIGR00517coord: 48..122
score: 9.6
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 78..93
scor
IPR009081Phosphopantetheine binding ACP domainGENE3DG3DSA:1.10.1200.10coord: 38..125
score: 9.5
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 63..107
score: 6.5
IPR009081Phosphopantetheine binding ACP domainPROFILEPS50075ACP_DOMAINcoord: 78..120
score: 1
IPR009081Phosphopantetheine binding ACP domainunknownSSF47336ACP-likecoord: 47..121
score: 1.01
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..125
score: 5.6
NoneNo IPR availablePANTHERPTHR20863:SF30SUBFAMILY NOT NAMEDcoord: 1..125
score: 5.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G012130Cucsa.256950Cucumber (Gy14) v1cgycmoB0718
CmoCh06G012130CmaCh00G004630Cucurbita maxima (Rimu)cmacmoB019
CmoCh06G012130CmaCh14G019350Cucurbita maxima (Rimu)cmacmoB271
CmoCh06G012130CmaCh06G011740Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G012130Cla021373Watermelon (97103) v1cmowmB793
CmoCh06G012130Csa3G128840Cucumber (Chinese Long) v2cmocuB806
CmoCh06G012130MELO3C006263Melon (DHL92) v3.5.1cmomeB755
CmoCh06G012130ClCG05G002860Watermelon (Charleston Gray)cmowcgB743
CmoCh06G012130CSPI03G10250Wild cucumber (PI 183967)cmocpiB814
CmoCh06G012130Lsi05G018950Bottle gourd (USVL1VR-Ls)cmolsiB757
CmoCh06G012130Cp4.1LG03g17590Cucurbita pepo (Zucchini)cmocpeB787
CmoCh06G012130Cp4.1LG08g02430Cucurbita pepo (Zucchini)cmocpeB796
CmoCh06G012130MELO3C006263.2Melon (DHL92) v3.6.1cmomedB857
CmoCh06G012130CsaV3_3G010390Cucumber (Chinese Long) v3cmocucB0953
CmoCh06G012130Cla97C05G083450Watermelon (97103) v2cmowmbB833
CmoCh06G012130Bhi01G000112Wax gourdcmowgoB1006
CmoCh06G012130CsGy3G010360Cucumber (Gy14) v2cgybcmoB401
CmoCh06G012130Carg06333Silver-seed gourdcarcmoB1288
CmoCh06G012130Carg14887Silver-seed gourdcarcmoB0852
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G012130CmoCh14G019910Cucurbita moschata (Rifu)cmocmoB224
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G012130Cucumber (Chinese Long) v3cmocucB0980
CmoCh06G012130Watermelon (97103) v2cmowmbB836
CmoCh06G012130Wax gourdcmowgoB1001
CmoCh06G012130Cucurbita moschata (Rifu)cmocmoB308
CmoCh06G012130Cucurbita moschata (Rifu)cmocmoB484
CmoCh06G012130Cucumber (Gy14) v1cgycmoB1007
CmoCh06G012130Cucurbita maxima (Rimu)cmacmoB362
CmoCh06G012130Wild cucumber (PI 183967)cmocpiB839
CmoCh06G012130Cucumber (Chinese Long) v2cmocuB829
CmoCh06G012130Melon (DHL92) v3.5.1cmomeB740
CmoCh06G012130Watermelon (Charleston Gray)cmowcgB745
CmoCh06G012130Watermelon (97103) v1cmowmB801
CmoCh06G012130Cucurbita pepo (Zucchini)cmocpeB765
CmoCh06G012130Cucurbita pepo (Zucchini)cmocpeB777
CmoCh06G012130Bottle gourd (USVL1VR-Ls)cmolsiB735
CmoCh06G012130Cucumber (Gy14) v2cgybcmoB834
CmoCh06G012130Melon (DHL92) v3.6.1cmomedB842
CmoCh06G012130Silver-seed gourdcarcmoB0322
CmoCh06G012130Silver-seed gourdcarcmoB1451