Cp4.1LG08g01710 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g01710
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaC03g31920D protein
LocationCp4.1LG08 : 3275543 .. 3278186 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGACACAGTTCATCAGCCCCCTTTCAAGATCTCACAAAATCTCAAATCCCCCACCATTTTTCTCCTCCTACATGGATTAAAATAAAGCAAAAAACGAAGCATCCTCCTTACCTTCATCTTCTTCACTCCTTTTGTCTTTTTCCCTCTGAATCTTTGATCCGCCATGGCCGAGCTCTGACACCCATCAGAGCTTTTTCGACCCATTATCGAAGCTGCCTCCCACTTTCCTCTTTCAATCGATTTATATATAAATCCATCACTCCCACTCACTTCACTCACTTAAAATCAATTCAATTCCATTTTCATTGCTTGATTTAGTAATTCCTCTGTTCTTGAAGCTGCTTCCATGGCGGCGGCGGCGGCAGCGGCAGCGGCGGCTCTGTCATTTTCCCCTTTTCATTTGGATCACGCTGCCTCGACCAGAATGCTGAAGGATTTTCTTCAGGAAAGTAATGGAAATGGAGAATCGAAAACGGCGTCGTTTGTTAAGAGGATCTCGTTTCCGTCGCTGAAATTGCGAAGGATTCTTCCGAGAAGCCTTTCGCGGCGGCTGTCGGGGATGAGAGAGAGAGATGAGAGAGAAACCAGCGGCGATTTCGTTGTTAAAGTAAAGGACATTATTCGGTGGAGATCGTTTAGGGATTTGGTCGACGAGACGGCGGAAATGGCGGCTCCGCCGCTTGATTTCGCTGATTCGCCGGGTCGTTATACGGCCGCCGCTACTACTACGACGACCACGACGGCGACTAATAGCAACAGTTCGAGTTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAAAGGTTGCTCCGACGACGATGAAGCGGGGAAAGTATATTTCTCTTGTGTCGGTGAAGATTCGTCGGAAACGCCCGTAACAAACTCAGTAAACGACAAAAAGGTGAGCAATAATTGAGTTCTTCGCACTTACGATGAAAATGGTCTTTTTAACTTTCTTTGACTTTTCATGACCGTTGGATCTGTTTTATTTTGCAAGCAAATTGTGAACGGTGTGATTAGATAAAATTTTTCTCACAAGACTAGATTCGTCCGTAGAGTATCACACTGGGACTGAAATTAAATATTTAAAAATAGGGTATTTTATTTTTATAATAATAATAAATAATGTATTTATTATTTGATAAAAAATTTACAAATGAATTATTTATATATATATATTTTTTCTTATAATAAATAATAAAATAAATTAATATATTTTATTATTTATTATAATTAAAAAAAATTAAATTATTTAACAACATTTTGAATCATTTTCCAGGTAAACTTATTATCCCGTGACAATAAAGGCGAACAAAGTGCTCGACGACTATTAGAACGTATCGACGAAACAATTTCATTATCACGAAGTTACAAGTTAATGGAACTGTTTCAACAAGAACGTCCGTATTATCGAGAAAGTGAAGACGATGAAGAACGGGATAATAGCACGGGAAAAGCTAAAGAAGACGGAAATGAGTTGTTTCGACGAGAATTCCCGTGTTATCGAGACAGTGAATACGACGGAGAACGAGATAAATCGAACGGAAGTGATTTTGGATGGATTTTGTCACAAAAGGGAAAGGAAAATCTTTGGAGAGAAATGGAGAGAGAAGGGAAATGGGGAGTGTTTGGTAACGAGGAGAGAGAAGAATTGGGATTAGAAATTGAAGGGGGAATTTTTGGATGTTTGGTTGATGAAATTATGCTTGATATTTTCCCATTATCAGTATAATTTTATTTATTATTATTTTTTTTTTTATAGAGTCAATAATTTTTTTTTTAATGCATACGGGATTAAGAGGACTTGACCTTGGCTCTGCTCGGGCCAAGGTCCCTCAATGCAACGTCGCATCTCATCTTGTTATCTCGATTCCCATCGACAGGGTTCATATGTCTTGACGCCATCATAACTCGCTCGATCATGCCACCGAGAATGGGCCCGTGTGTCATTCATCTCATCGGGACTTCCCGAACATCCATCCATCCGGGTTCTATCGAGGCATTGGCCCTCCCGTGTCCATGCCGAGTCGTTTACGGATACCATACCGGATAGTGGGTGTATGTAGCAACCTCCAACACGCGGGCTGGGGCGCAATATCGGCACACACGTGCCATCTGGTACTGTCCTTCAAAAACCAATTTCAAAGGAAGTCGCCCGAGACACTCGTTCCAGCGCGCTCGCTCACATTGTGACACACGTACGTGTCGCAGGGTAGCTCACTTAGTCCACATGGCCCAAGGGTGGCAGAAGGGAAAGCTCAAAGACGACAATATAAATTATTTGCAGTAGAATTTCTTCCCCGACGTTCTAAAAAATGAGAATTTTACAGAGATGGAAAATGAAAAACGAGGCGGGGACAAGATGGAGAAATCTTCTGTATCCTCATCTCGCCCATCGACATCTCAAATTTATGAGTCAGTTTCATGAATCGTGAATTAAATTATTTCACATAAAATAGTTAATTTCTCTAATCGAGCTCAAACTCAACAAATGCATATACAATTATCGAGCTCAATTGAGTAACACCGACAAATAAACGTAGGTTAGAAATTGCAGTAGCCACAAAGGAACAAAACTTAGCAGTCAGTAGTTTAGACACGTACAAAGCATTGTCTTGAAGACAACT

mRNA sequence

CACGACACAGTTCATCAGCCCCCTTTCAAGATCTCACAAAATCTCAAATCCCCCACCATTTTTCTCCTCCTACATGGATTAAAATAAAGCAAAAAACGAAGCATCCTCCTTACCTTCATCTTCTTCACTCCTTTTGTCTTTTTCCCTCTGAATCTTTGATCCGCCATGGCCGAGCTCTGACACCCATCAGAGCTTTTTCGACCCATTATCGAAGCTGCCTCCCACTTTCCTCTTTCAATCGATTTATATATAAATCCATCACTCCCACTCACTTCACTCACTTAAAATCAATTCAATTCCATTTTCATTGCTTGATTTAGTAATTCCTCTGTTCTTGAAGCTGCTTCCATGGCGGCGGCGGCGGCAGCGGCAGCGGCGGCTCTGTCATTTTCCCCTTTTCATTTGGATCACGCTGCCTCGACCAGAATGCTGAAGGATTTTCTTCAGGAAAGTAATGGAAATGGAGAATCGAAAACGGCGTCGTTTGTTAAGAGGATCTCGTTTCCGTCGCTGAAATTGCGAAGGATTCTTCCGAGAAGCCTTTCGCGGCGGCTGTCGGGGATGAGAGAGAGAGATGAGAGAGAAACCAGCGGCGATTTCGTTGTTAAAGTAAAGGACATTATTCGGTGGAGATCGTTTAGGGATTTGGTCGACGAGACGGCGGAAATGGCGGCTCCGCCGCTTGATTTCGCTGATTCGCCGGGTCGTTATACGGCCGCCGCTACTACTACGACGACCACGACGGCGACTAATAGCAACAGTTCGAGTTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAAAGGTTGCTCCGACGACGATGAAGCGGGGAAAGTATATTTCTCTTGTGTCGGTGAAGATTCGTCGGAAACGCCCGTAACAAACTCAGTAAACGACAAAAAGGTAAACTTATTATCCCGTGACAATAAAGGCGAACAAAGTGCTCGACGACTATTAGAACGTATCGACGAAACAATTTCATTATCACGAAGTTACAAGTTAATGGAACTGTTTCAACAAGAACGTCCGTATTATCGAGAAAGTGAAGACGATGAAGAACGGGATAATAGCACGGGAAAAGCTAAAGAAGACGGAAATGAGTTGTTTCGACGAGAATTCCCGTGTTATCGAGACAGTGAATACGACGGAGAACGAGATAAATCGAACGGAAGTGATTTTGGATGGATTTTGTCACAAAAGGGAAAGGAAAATCTTTGGAGAGAAATGGAGAGAGAAGGGAAATGGGGAGTGTTTGGTAACGAGGAGAGAGAAGAATTGGGATTAGAAATTGAAGGGGGAATTTTTGGATGTTTGGTTGATGAAATTATGCTTGATATTTTCCCATTATCAGTATAATTTTATTTATTATTATTTTTTTTTTTATAGAGTCAATAATTTTTTTTTTAATGCATACGGGATTAAGAGGACTTGACCTTGGCTCTGCTCGGGCCAAGGTCCCTCAATGCAACGTCGCATCTCATCTTGTTATCTCGATTCCCATCGACAGGGTTCATATGTCTTGACGCCATCATAACTCGCTCGATCATGCCACCGAGAATGGGCCCGTGTGTCATTCATCTCATCGGGACTTCCCGAACATCCATCCATCCGGGTTCTATCGAGGCATTGGCCCTCCCGTGTCCATGCCGAGTCGTTTACGGATACCATACCGGATAGTGGGTGTATGTAGCAACCTCCAACACGCGGGCTGGGGCGCAATATCGGCACACACGTGCCATCTGGTACTGTCCTTCAAAAACCAATTTCAAAGGAAGTCGCCCGAGACACTCGTTCCAGCGCGCTCGCTCACATTGTGACACACGTACGTGTCGCAGGGTAGCTCACTTAGTCCACATGGCCCAAGGGTGGCAGAAGGGAAAGCTCAAAGACGACAATATAAATTATTTGCAGTAGAATTTCTTCCCCGACGTTCTAAAAAATGAGAATTTTACAGAGATGGAAAATGAAAAACGAGGCGGGGACAAGATGGAGAAATCTTCTGTATCCTCATCTCGCCCATCGACATCTCAAATTTATGAGTCAGTTTCATGAATCGTGAATTAAATTATTTCACATAAAATAGTTAATTTCTCTAATCGAGCTCAAACTCAACAAATGCATATACAATTATCGAGCTCAATTGAGTAACACCGACAAATAAACGTAGGTTAGAAATTGCAGTAGCCACAAAGGAACAAAACTTAGCAGTCAGTAGTTTAGACACGTACAAAGCATTGTCTTGAAGACAACT

Coding sequence (CDS)

ATGGCGGCGGCGGCGGCAGCGGCAGCGGCGGCTCTGTCATTTTCCCCTTTTCATTTGGATCACGCTGCCTCGACCAGAATGCTGAAGGATTTTCTTCAGGAAAGTAATGGAAATGGAGAATCGAAAACGGCGTCGTTTGTTAAGAGGATCTCGTTTCCGTCGCTGAAATTGCGAAGGATTCTTCCGAGAAGCCTTTCGCGGCGGCTGTCGGGGATGAGAGAGAGAGATGAGAGAGAAACCAGCGGCGATTTCGTTGTTAAAGTAAAGGACATTATTCGGTGGAGATCGTTTAGGGATTTGGTCGACGAGACGGCGGAAATGGCGGCTCCGCCGCTTGATTTCGCTGATTCGCCGGGTCGTTATACGGCCGCCGCTACTACTACGACGACCACGACGGCGACTAATAGCAACAGTTCGAGTTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAAAGGTTGCTCCGACGACGATGAAGCGGGGAAAGTATATTTCTCTTGTGTCGGTGAAGATTCGTCGGAAACGCCCGTAACAAACTCAGTAAACGACAAAAAGGTAAACTTATTATCCCGTGACAATAAAGGCGAACAAAGTGCTCGACGACTATTAGAACGTATCGACGAAACAATTTCATTATCACGAAGTTACAAGTTAATGGAACTGTTTCAACAAGAACGTCCGTATTATCGAGAAAGTGAAGACGATGAAGAACGGGATAATAGCACGGGAAAAGCTAAAGAAGACGGAAATGAGTTGTTTCGACGAGAATTCCCGTGTTATCGAGACAGTGAATACGACGGAGAACGAGATAAATCGAACGGAAGTGATTTTGGATGGATTTTGTCACAAAAGGGAAAGGAAAATCTTTGGAGAGAAATGGAGAGAGAAGGGAAATGGGGAGTGTTTGGTAACGAGGAGAGAGAAGAATTGGGATTAGAAATTGAAGGGGGAATTTTTGGATGTTTGGTTGATGAAATTATGCTTGATATTTTCCCATTATCAGTATAA

Protein sequence

MAAAAAAAAAALSFSPFHLDHAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGMRERDERETSGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAAATTTTTTTATNSNSSSWCESDFTAEDLPSPSWKGCSDDDEAGKVYFSCVGEDSSETPVTNSVNDKKVNLLSRDNKGEQSARRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDNSTGKAKEDGNELFRREFPCYRDSEYDGERDKSNGSDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLDIFPLSV
Homology
[Close]
BLAST of Cp4.1LG08g01710 vs. TrEMBL
Match: A0A0A0L6C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124790 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.3e-77
Identity = 203/367 (55.31%), Postives = 232/367 (63.22%), Query Frame = 1 

Query: 8   AAAALSFSPFHLDHAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISF 67
           AA  LSF PF L+  A TRMLKDFL E+N NG    + K  SF           VKRIS 
Sbjct: 2   AAPTLSFPPFPLNREAPTRMLKDFLHETNPNGLASPKPKPTSFKALAFHAVVAAVKRISL 61

Query: 68  PSLKLRRILPRSLSRRLSGMRERDERETSGDFVVKVKDIIRWRSFRDLVDETAEMAAPPL 127
           PS+K  RI PRSLSRRL    ERDERET GDFVVK+KDIIRW+SFRDL+DET   AAPPL
Sbjct: 62  PSVKSPRIFPRSLSRRLLKKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTA-AAPPL 121

Query: 128 DFADSPGRYT--AAATTTTTTTAT----NSNSSSWCESDFTAEDLPSPSWKGCSDDDEAG 187
           DFA+SP RYT  AAATTTTTTT T    +S SSSWCESDFTAEDL SPSW+  SDD   G
Sbjct: 122 DFAESPDRYTYTAAATTTTTTTTTTTTSSSKSSSWCESDFTAEDLASPSWRDWSDDGTMG 181

Query: 188 KVYFSCVGEDSSETPVTNSVNDKKVN-LLSRDNKGEQ-----SARRLLERIDETISLSRS 247
           K+YF CVGEDS+ET    + ND++VN LL R++  EQ     S RRLLE++   ISLS+S
Sbjct: 182 KMYFPCVGEDSNETTAAYAQNDEEVNALLIREDNEEQEVLDESTRRLLEQVKGAISLSKS 241

Query: 248 YKLMELFQQERPYYRESEDDEERDNSTGKAKEDGNELFRREFPCYRDSEYDGERDK---- 307
            +L+E         R   D   R            ELFRRE    +D +     D     
Sbjct: 242 CRLVE---------RCGLDWLIR------------ELFRRELADVQDVDERVRNDDRRIR 301

Query: 308 -SNGSD----FGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEI 339
             NG D      W LS KGKE+  REMEREGKW +FG +E+ ELGLEIEG I GCLVDEI
Sbjct: 302 VKNGKDDEYVCDWFLSHKGKESYVREMEREGKWEIFGVDEKIELGLEIEGEILGCLVDEI 346

[Close]
BLAST of Cp4.1LG08g01710 vs. TrEMBL
Match: A0A067K104_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14469 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 9.4e-23
Identity = 105/339 (30.97%), Postives = 160/339 (47.20%), Query Frame = 1 

Query: 47  VKRISFPSLKLRRILPRSLSRRLSGMRERDERETSG----------DFVVKVKDIIRWRS 106
           +K   F S+K   I PRS+SRRLS       R+T               V +KDIIRW+S
Sbjct: 11  LKNFQFTSVKAPSIFPRSISRRLSKKSSASSRDTERASESKLESEVKITVTIKDIIRWKS 70

Query: 107 FRDLVDETAEMAAPPLDFADSPGRYTAAATTTTTTTATNSNSSSWCESDFTAEDLPSPSW 166
           FRDL++E +    PPLD A SP   T  +T + TTT  +SN SSWC+SDFT+E L  P W
Sbjct: 71  FRDLMEEKS----PPLDLASSPHHCTTTSTASATTTPCSSNGSSWCDSDFTSEYL--PFW 130

Query: 167 KGCSDD------DEAGKVYFSCVGEDS--SETPVTNSVNDKK----VNLLSRDNKGEQSA 226
            G S++       E GK    CVGE +  +E  V     +K+    ++++  + +G++ +
Sbjct: 131 NGNSEEYGENEAMEVGKKDLPCVGEATIEAEKIVGPKAEEKQLSSPISVIDIEFEGDEDS 190

Query: 227 RRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDNSTGKAKEDGNEL------- 286
             + +  +  +     + L +           SE++ E +   G+ +E    L       
Sbjct: 191 SSIYDESNANVESKYPFNLEKWMAVNE--NTSSEEETETNTINGEEEEAWQLLNYFKQTS 250

Query: 287 ----------FRREFPCYRDSEYDGE-----------RDKSNGSDFGWILSQKGKENLWR 336
                     F RE  C +  E   E           ++  NG D  W+   + KE   R
Sbjct: 251 SMKEERLVFDFFREELCRKTYETKNEGFECEMLISRVKEWINGEDRMWV-GGENKEACIR 310

[Close]
BLAST of Cp4.1LG08g01710 vs. TrEMBL
Match: A0A166FGB5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008585 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.4e-21
Identity = 122/365 (33.42%), Postives = 164/365 (44.93%), Query Frame = 1 

Query: 26  RMLKDFLQESNGNGESKTASF------------------VKRISFPS-LKLRRILPRSLS 85
           RMLKDFL +   N  SK  SF                  +K + F + +K   ILPRS++
Sbjct: 13  RMLKDFLAD---NSHSKRVSFFQDNLNMTFSNSGFSKFLIKYLPFTTNIKPPSILPRSIT 72

Query: 86  RRLSGMRERDERETSGDFV--VKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAA 145
           +RLS  R         +    VKVKDI+RWRSFRDL    AE+ + PL+F+ SP   T  
Sbjct: 73  KRLSKSRSVSRNVNMKELTAKVKVKDILRWRSFRDL----AEVESQPLNFSSSPHHCTTV 132

Query: 146 ATTTTTTTAT-NSNSSSWCESDFTAEDLPS-------PSWKGCSDDDEAGKVYFS---CV 205
            TTT +T+ T NS  SSWC+SDFTAEDLPS       P  K   D+++      S   C 
Sbjct: 133 TTTTGSTSMTSNSGRSSWCDSDFTAEDLPSWCSNSVTPKGKWLCDEEKEQNSPVSVLDCF 192

Query: 206 GEDSSE-------TP------VTNSVNDKKVNLLSRDNKGEQSARRLLERIDETIS---- 265
            E+  E       TP       T    +K       +N+ E+ A +LL ++   IS    
Sbjct: 193 SEEDEESFSYFHQTPRRKQAGTTELFVNKTHKHEEPENRAEEKAMQLLNQVKTNISGYLE 252

Query: 266 LSRSYKLMELFQQERPYYRESEDDEERDNSTGKAKEDGNELFRREFPCYRDSEYDGERDK 325
           +   + L++ F         SE   E      +  +  NE  +                 
Sbjct: 253 VEEEFLLLDFF---------SEQLTENKKGDYELTKVANEWIK----------------- 312

Query: 326 SNGSDFG---WILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIML 339
             G D G   W L  K KE   R+MER  KW  F +E+ +ELGLEIE  +  CLVDE++ 
Sbjct: 313 --GEDEGCLEWKLVGK-KEFSIRDMERGVKWNKF-DEDEQELGLEIEKQLLNCLVDEVLF 340

[Close]
BLAST of Cp4.1LG08g01710 vs. TrEMBL
Match: M5XHR6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026717mg PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.4e-20
Identity = 108/331 (32.63%), Postives = 158/331 (47.73%), Query Frame = 1 

Query: 47  VKRISFPSLKLRRILPRSLSRRLSGMR----ERDERETSGDFVVKVKDIIRWRSFRDLVD 106
           VK I F ++K    LPRSLSRRL   +     R + +      V+VKDIIRW SFRD   
Sbjct: 99  VKNIPFTTVKSPSFLPRSLSRRLLQSKFQSSSRKQSQNQVQITVRVKDIIRWTSFRD--- 158

Query: 107 ETAEMAAPP--LDFADSP------GRYTAAATTTTTTTATNSNSSSWCESDFTAEDLPS- 166
              EM  PP  LD+A SP         T + TTT TT +++SN SSWC+SDFTAE LPS 
Sbjct: 159 ---EMLPPPPPLDYASSPLHCTTSTTITGSTTTTCTTCSSSSNGSSWCDSDFTAEFLPSL 218

Query: 167 -PSWKGCSDDDEAGKVYFSCVGEDSSE----TPVTNSVN---DKKVNLLSRDNKGEQSAR 226
             S      D+E GK Y  CVG+D  E    T  T S N     +V +L  D   + S  
Sbjct: 219 VGSNSDPHADEEVGKKYLPCVGKDFMEEEASTTGTGSCNIALGPQVEILLGDEDEQHSPV 278

Query: 227 RLL-----ERIDETISLSRSYKLMELFQQERPYYRESEDDEERDNSTGKAKEDGN----- 286
            +L     E  D++ + +    L  +  ++     E  +  +  +S+  + E+G+     
Sbjct: 279 SVLDCQFGEDEDDSFTSTFDQSLANVGDEDEEMAMELLNYVKATSSSPDSCEEGHLEDKL 338

Query: 287 --ELFRREFPCYRDSEYDGERDKSNGSDFGWILSQKG---------KENLWREMEREGKW 336
             + FR E    R+   DG + +       W+  +           KE   R+M + G+W
Sbjct: 339 LLDFFREEMSVQRNQTDDGFQWEMVSKAKAWVSGEHNELEWGLEHKKEACVRDMHKGGRW 398

[Close]
BLAST of Cp4.1LG08g01710 vs. TrEMBL
Match: A0A166E443_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_006904 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.3e-19
Identity = 120/362 (33.15%), Postives = 167/362 (46.13%), Query Frame = 1 

Query: 26  RMLKDFLQESNGNGESKTASF------------------VKRISFPS-LKLRRILPRSLS 85
           +MLKDFL +   N  SK  SF                  +K + F S +K   ILPRS++
Sbjct: 14  KMLKDFLAD---NSHSKRVSFFEDNLNMTFSNKAFSKFLIKYLPFTSNIKPPSILPRSIT 73

Query: 86  RRLSGMRERDERETSGDFVVKVK--DIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAA 145
           RRLS  R    +  + D  VKVK  DI+RWRSFRDL  E +     PLDF+ SP   T  
Sbjct: 74  RRLSKSRAVQPKLNAKDLAVKVKVKDILRWRSFRDLAAEQST----PLDFSSSPQHCTTV 133

Query: 146 ATTT-TTTTATNSNSSSWCESDFTAEDLPSPSW----------KGCSDDDEAGKV----- 205
            TTT +T+T ++S  SSWC+SDFTAEDL  PSW            C +D E         
Sbjct: 134 TTTTGSTSTRSSSGRSSWCDSDFTAEDL--PSWCSNSIEQLGENVCDEDKEQNSPVCVLD 193

Query: 206 YFSCVGEDS----SETPVTNSV-NDKKVNLLSRDNKGEQSARRLLERID-------ETIS 265
           Y S   +DS     +TP  +    +   N +  D   E+ A +LL  +        E + 
Sbjct: 194 YASQEDKDSFSYFHQTPARSQTRTELSANKIITD---EEEAMQLLNVVKTSMSSSAECLE 253

Query: 266 LSRSYKLMELFQQERPYYRESEDDEERDNSTGKAKEDGNELFRREFPCYRDSEYDGERDK 325
           +   + L++ F Q+      S+D +  D     AKE            +   E DG  + 
Sbjct: 254 IDEEFLLLDFFMQQL-----SDDKKGGDELIEVAKE------------WIRGENDGCLE- 313

Query: 326 SNGSDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLDIF 339
                  W    K KE   ++MER  KW  F +E+++ELGLE+E  +   LVDE++ D+ 
Sbjct: 314 -------WSTVGK-KEFSIKDMERGVKWDKF-DEDQKELGLELENQMLNQLVDELLSDLL 336

[Close]
BLAST of Cp4.1LG08g01710 vs. TAIR10
Match: AT4G00770.1 (AT4G00770.1 unknown protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-07
Identity = 78/272 (28.68%), Postives = 122/272 (44.85%), Query Frame = 1 

Query: 60  ILPRSLSRRLSGMRERDERETSGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPG 119
           ILPRSLSRRL+   + + + +    V++VKDI+RW S +DL ++ +            P 
Sbjct: 70  ILPRSLSRRLATKNKAENQASIT--VIRVKDIVRWHSSKDLHEDISHF---------EPH 129

Query: 120 RYTAAATTTTTTTATNSNS--SSWCESDFTAEDLPSPSWKGCSDDDEAG-----KVYFSC 179
           +YT   TTTTT ++T S +  SSW + DFT+E LPS SW   S+ +E G     K    C
Sbjct: 130 QYTTKNTTTTTGSSTTSGTSCSSWSDLDFTSEFLPS-SWG--SNVEECGEKQSVKNNLHC 189

Query: 180 VGEDS------SETPV------------TNSVNDKKVNLLSRDNKGEQSARRLLERIDET 239
           VGEDS      ++T V             + V+  ++     D   + S  + L+ ++ T
Sbjct: 190 VGEDSCTAVILADTEVGPEENLQCEKEHNSPVSVFEIQHEEYDETSDSSFSQCLDNVERT 249

Query: 240 ISLSRSYKLMELFQQERPYYRESEDDEERDNSTGKAK--EDGNELFRREFPCYRDSEYDG 299
                  KLM+  Q+       S  + +   S  +A   E G E   +    Y D E   
Sbjct: 250 -----KQKLMQTIQRFESLANISPFNLDEWGSMDEASCMEGGQETDTK----YDDDENCD 309

Query: 300 ERDKSNGSDFGWILSQKGKENLWREMEREGKW 305
             D+ +  ++   + +K  +   R  ER   W
Sbjct: 310 TVDRESEDEYNDEVEEKAAQLWNRVKERHAIW 318

[Close]
BLAST of Cp4.1LG08g01710 vs. NCBI nr
Match: gi|659075370|ref|XP_008438109.1| (PREDICTED: uncharacterized protein LOC103483313 isoform X2 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 1.4e-80
Identity = 200/359 (55.71%), Postives = 234/359 (65.18%), Query Frame = 1 

Query: 8   AAAALSFSPFHLDHAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISF 67
           AA +LSF PF L+    TRMLKDFL E+N NG    + K  SF           VKRISF
Sbjct: 2   AAPSLSFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRISF 61

Query: 68  PSLKLRRILPRSLSRRLSGMRERDERETSGDFVVKVKDIIRWRSFRDLVDETAEMAAPPL 127
           PS+K  RI PRSLSRRL    ERDERET GDFVVK+KDIIRW+SFRDL+DET   AAPPL
Sbjct: 62  PSVKSPRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTA-AAPPL 121

Query: 128 DFADSPGRYT--AAATTTTTTTAT--NSNSSSWCESDFTAEDLPSPSWKGCSDDDEAGKV 187
           DFA+SP RYT  AAATTTTTTT T  +S SSSWCESDFTAEDLPSPSW+  SDD   GK+
Sbjct: 122 DFAESPDRYTYTAAATTTTTTTTTTSSSKSSSWCESDFTAEDLPSPSWRDWSDDGTIGKM 181

Query: 188 YFSCVGEDSSETPVTNSVNDKKVNLLS-RDNKGEQ-----SARRLLERIDETISLSRSYK 247
           YF CVGEDS+ET   ++ NDK+VN LS R++K EQ     S RRLLE++   ISLS S +
Sbjct: 182 YFRCVGEDSTETTAAHAKNDKEVNALSRREDKEEQEVLDESTRRLLEQVKGVISLSESCR 241

Query: 248 LMELFQQERPYYRESEDDEERDNSTGKAKEDG--NELFRREFPCYRDSEYDGERDKSNGS 307
           L E                           DG   ELFRR+   ++D + D  R K+   
Sbjct: 242 LAE-----------------------HCGLDGLLRELFRRDLASFQDDD-DRIRMKNGKD 301

Query: 308 D---FGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLDIF 337
               + W LS KGKE+  REMEREGKW +FG +E+ +LGLEIEG + GCLVDEI+LDIF
Sbjct: 302 GEYVYDWFLSHKGKESYVREMEREGKWEIFGVDEKIDLGLEIEGEVLGCLVDEILLDIF 335

[Close]
BLAST of Cp4.1LG08g01710 vs. NCBI nr
Match: gi|659075368|ref|XP_008438108.1| (PREDICTED: uncharacterized protein LOC103483313 isoform X1 [Cucumis melo])

HSP 1 Score: 303.5 bits (776), Expect = 4.6e-79
Identity = 200/361 (55.40%), Postives = 234/361 (64.82%), Query Frame = 1 

Query: 8   AAAALSFSPFHLDHAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISF 67
           AA +LSF PF L+    TRMLKDFL E+N NG    + K  SF           VKRISF
Sbjct: 2   AAPSLSFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRISF 61

Query: 68  PSLKLRRILPRSLSRRLSGMRERDERETSGDFVVKVKDIIRWRSFRDLVDETAEMAAPPL 127
           PS+K  RI PRSLSRRL    ERDERET GDFVVK+KDIIRW+SFRDL+DET   AAPPL
Sbjct: 62  PSVKSPRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTA-AAPPL 121

Query: 128 DFADSPGRYT--AAATTTTTTTAT--NSNSSSWCESDFTAEDLPSPSWKGCSDDDEAGKV 187
           DFA+SP RYT  AAATTTTTTT T  +S SSSWCESDFTAEDLPSPSW+  SDD   GK+
Sbjct: 122 DFAESPDRYTYTAAATTTTTTTTTTSSSKSSSWCESDFTAEDLPSPSWRDWSDDGTIGKM 181

Query: 188 YFSCVGEDSSETPVTNSVNDKKV--NLLS-RDNKGEQ-----SARRLLERIDETISLSRS 247
           YF CVGEDS+ET   ++ NDK+V  N LS R++K EQ     S RRLLE++   ISLS S
Sbjct: 182 YFRCVGEDSTETTAAHAKNDKEVGINALSRREDKEEQEVLDESTRRLLEQVKGVISLSES 241

Query: 248 YKLMELFQQERPYYRESEDDEERDNSTGKAKEDG--NELFRREFPCYRDSEYDGERDKSN 307
            +L E                           DG   ELFRR+   ++D + D  R K+ 
Sbjct: 242 CRLAE-----------------------HCGLDGLLRELFRRDLASFQDDD-DRIRMKNG 301

Query: 308 GSD---FGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLDI 337
                 + W LS KGKE+  REMEREGKW +FG +E+ +LGLEIEG + GCLVDEI+LDI
Sbjct: 302 KDGEYVYDWFLSHKGKESYVREMEREGKWEIFGVDEKIDLGLEIEGEVLGCLVDEILLDI 337

[Close]
BLAST of Cp4.1LG08g01710 vs. NCBI nr
Match: gi|449432203|ref|XP_004133889.1| (PREDICTED: uncharacterized protein LOC101208043 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.9e-77
Identity = 203/367 (55.31%), Postives = 232/367 (63.22%), Query Frame = 1 

Query: 8   AAAALSFSPFHLDHAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISF 67
           AA  LSF PF L+  A TRMLKDFL E+N NG    + K  SF           VKRIS 
Sbjct: 2   AAPTLSFPPFPLNREAPTRMLKDFLHETNPNGLASPKPKPTSFKALAFHAVVAAVKRISL 61

Query: 68  PSLKLRRILPRSLSRRLSGMRERDERETSGDFVVKVKDIIRWRSFRDLVDETAEMAAPPL 127
           PS+K  RI PRSLSRRL    ERDERET GDFVVK+KDIIRW+SFRDL+DET   AAPPL
Sbjct: 62  PSVKSPRIFPRSLSRRLLKKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTA-AAPPL 121

Query: 128 DFADSPGRYT--AAATTTTTTTAT----NSNSSSWCESDFTAEDLPSPSWKGCSDDDEAG 187
           DFA+SP RYT  AAATTTTTTT T    +S SSSWCESDFTAEDL SPSW+  SDD   G
Sbjct: 122 DFAESPDRYTYTAAATTTTTTTTTTTTSSSKSSSWCESDFTAEDLASPSWRDWSDDGTMG 181

Query: 188 KVYFSCVGEDSSETPVTNSVNDKKVN-LLSRDNKGEQ-----SARRLLERIDETISLSRS 247
           K+YF CVGEDS+ET    + ND++VN LL R++  EQ     S RRLLE++   ISLS+S
Sbjct: 182 KMYFPCVGEDSNETTAAYAQNDEEVNALLIREDNEEQEVLDESTRRLLEQVKGAISLSKS 241

Query: 248 YKLMELFQQERPYYRESEDDEERDNSTGKAKEDGNELFRREFPCYRDSEYDGERDK---- 307
            +L+E         R   D   R            ELFRRE    +D +     D     
Sbjct: 242 CRLVE---------RCGLDWLIR------------ELFRRELADVQDVDERVRNDDRRIR 301

Query: 308 -SNGSD----FGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEI 339
             NG D      W LS KGKE+  REMEREGKW +FG +E+ ELGLEIEG I GCLVDEI
Sbjct: 302 VKNGKDDEYVCDWFLSHKGKESYVREMEREGKWEIFGVDEKIELGLEIEGEILGCLVDEI 346

[Close]
BLAST of Cp4.1LG08g01710 vs. NCBI nr
Match: gi|643717072|gb|KDP28698.1| (hypothetical protein JCGZ_14469 [Jatropha curcas])

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-22
Identity = 105/339 (30.97%), Postives = 160/339 (47.20%), Query Frame = 1 

Query: 47  VKRISFPSLKLRRILPRSLSRRLSGMRERDERETSG----------DFVVKVKDIIRWRS 106
           +K   F S+K   I PRS+SRRLS       R+T               V +KDIIRW+S
Sbjct: 11  LKNFQFTSVKAPSIFPRSISRRLSKKSSASSRDTERASESKLESEVKITVTIKDIIRWKS 70

Query: 107 FRDLVDETAEMAAPPLDFADSPGRYTAAATTTTTTTATNSNSSSWCESDFTAEDLPSPSW 166
           FRDL++E +    PPLD A SP   T  +T + TTT  +SN SSWC+SDFT+E L  P W
Sbjct: 71  FRDLMEEKS----PPLDLASSPHHCTTTSTASATTTPCSSNGSSWCDSDFTSEYL--PFW 130

Query: 167 KGCSDD------DEAGKVYFSCVGEDS--SETPVTNSVNDKK----VNLLSRDNKGEQSA 226
            G S++       E GK    CVGE +  +E  V     +K+    ++++  + +G++ +
Sbjct: 131 NGNSEEYGENEAMEVGKKDLPCVGEATIEAEKIVGPKAEEKQLSSPISVIDIEFEGDEDS 190

Query: 227 RRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDNSTGKAKEDGNEL------- 286
             + +  +  +     + L +           SE++ E +   G+ +E    L       
Sbjct: 191 SSIYDESNANVESKYPFNLEKWMAVNE--NTSSEEETETNTINGEEEEAWQLLNYFKQTS 250

Query: 287 ----------FRREFPCYRDSEYDGE-----------RDKSNGSDFGWILSQKGKENLWR 336
                     F RE  C +  E   E           ++  NG D  W+   + KE   R
Sbjct: 251 SMKEERLVFDFFREELCRKTYETKNEGFECEMLISRVKEWINGEDRMWV-GGENKEACIR 310

[Close]
BLAST of Cp4.1LG08g01710 vs. NCBI nr
Match: gi|802697667|ref|XP_012083497.1| (PREDICTED: uncharacterized protein LOC105643062 [Jatropha curcas])

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-22
Identity = 105/339 (30.97%), Postives = 160/339 (47.20%), Query Frame = 1 

Query: 47  VKRISFPSLKLRRILPRSLSRRLSGMRERDERETSG----------DFVVKVKDIIRWRS 106
           +K   F S+K   I PRS+SRRLS       R+T               V +KDIIRW+S
Sbjct: 78  LKNFQFTSVKAPSIFPRSISRRLSKKSSASSRDTERASESKLESEVKITVTIKDIIRWKS 137

Query: 107 FRDLVDETAEMAAPPLDFADSPGRYTAAATTTTTTTATNSNSSSWCESDFTAEDLPSPSW 166
           FRDL++E +    PPLD A SP   T  +T + TTT  +SN SSWC+SDFT+E L  P W
Sbjct: 138 FRDLMEEKS----PPLDLASSPHHCTTTSTASATTTPCSSNGSSWCDSDFTSEYL--PFW 197

Query: 167 KGCSDD------DEAGKVYFSCVGEDS--SETPVTNSVNDKK----VNLLSRDNKGEQSA 226
            G S++       E GK    CVGE +  +E  V     +K+    ++++  + +G++ +
Sbjct: 198 NGNSEEYGENEAMEVGKKDLPCVGEATIEAEKIVGPKAEEKQLSSPISVIDIEFEGDEDS 257

Query: 227 RRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDNSTGKAKEDGNEL------- 286
             + +  +  +     + L +           SE++ E +   G+ +E    L       
Sbjct: 258 SSIYDESNANVESKYPFNLEKWMAVNE--NTSSEEETETNTINGEEEEAWQLLNYFKQTS 317

Query: 287 ----------FRREFPCYRDSEYDGE-----------RDKSNGSDFGWILSQKGKENLWR 336
                     F RE  C +  E   E           ++  NG D  W+   + KE   R
Sbjct: 318 SMKEERLVFDFFREELCRKTYETKNEGFECEMLISRVKEWINGEDRMWV-GGENKEACIR 377

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g01710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g01710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6C4_CUCSA1.3e-7755.31Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124790 PE=4 SV=1[more]
A0A067K104_JATCU9.4e-2330.97Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14469 PE=4 SV=1[more]
A0A166FGB5_DAUCA1.4e-2133.42Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008585 PE=4 SV=1[more]
M5XHR6_PRUPE4.4e-2032.63Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026717mg PE=4 SV=1[more]
A0A166E443_DAUCA8.3e-1933.15Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_006904 PE=4 SV=1[more]
BLAST of Cp4.1LG08g01710 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00770.11.7e-0728.68 unknown protein[more]
BLAST of Cp4.1LG08g01710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075370|ref|XP_008438109.1|1.4e-8055.71PREDICTED: uncharacterized protein LOC103483313 isoform X2 [Cucumis melo][more]
gi|659075368|ref|XP_008438108.1|4.6e-7955.40PREDICTED: uncharacterized protein LOC103483313 isoform X1 [Cucumis melo][more]
gi|449432203|ref|XP_004133889.1|1.9e-7755.31PREDICTED: uncharacterized protein LOC101208043 [Cucumis sativus][more]
gi|643717072|gb|KDP28698.1|1.4e-2230.97hypothetical protein JCGZ_14469 [Jatropha curcas][more]
gi|802697667|ref|XP_012083497.1|1.4e-2230.97PREDICTED: uncharacterized protein LOC105643062 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0031167 rRNA methylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g01710.1Cp4.1LG08g01710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33623FAMILY NOT NAMEDcoord: 47..178
score: 3.8
NoneNo IPR availablePANTHERPTHR33623:SF4SUBFAMILY NOT NAMEDcoord: 47..178
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g01710Cucsa.257990Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g01710CmaCh06G011110Cucurbita maxima (Rimu)cmacpeB854
Cp4.1LG08g01710CmoCh06G011380Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g01710Cla021273Watermelon (97103) v1cpewmB845
Cp4.1LG08g01710Csa3G124790Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g01710MELO3C006152Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g01710ClCG05G001920Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g01710CSPI03G09200Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g01710Lsi05G019990Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g01710MELO3C006152.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g01710CsaV3_3G009320Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g01710Bhi01G000225Wax gourdcpewgoB1106
Cp4.1LG08g01710CsGy3G009280Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g01710Carg23883Silver-seed gourdcarcpeB0687
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g01710Silver-seed gourdcarcpeB0885
Cp4.1LG08g01710Cucumber (Chinese Long) v3cpecucB1077
Cp4.1LG08g01710Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g01710Cucumber (Gy14) v1cgycpeB0969
Cp4.1LG08g01710Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g01710Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g01710Wild cucumber (PI 183967)cpecpiB879
Cp4.1LG08g01710Cucumber (Chinese Long) v2cpecuB877
Cp4.1LG08g01710Bottle gourd (USVL1VR-Ls)cpelsiB696
Cp4.1LG08g01710Watermelon (Charleston Gray)cpewcgB790
Cp4.1LG08g01710Watermelon (97103) v1cpewmB854
Cp4.1LG08g01710Melon (DHL92) v3.5.1cpemeB791
Cp4.1LG08g01710Cucumber (Gy14) v2cgybcpeB889
Cp4.1LG08g01710Melon (DHL92) v3.6.1cpemedB932