Cla021273 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021273
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr5 : 1743435 .. 1744100 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTACTCTCTCATTTCCCCCTCTTCCTTTGAATCGTGAAGGATCCACCAGAATGCTCAAGGATTTTCTTCAGGAAACCAATGCAAATGGAATCGCATCTTCTAAACCTAAACCGGCGTCGTTTAAGACTCTGGCTATCCACGCCGTCGTCGCCGCCGTCAAGAGGATCTCGTTTCCGTCTGTGAAATCGCCAAGGATTTTCCCCAGAAGCTTTTCGCGGAGGCTGTTGAGGAAAAAAGAGAGAGATGAGAGAGAAATCGGAGGCGATTTCGTTGTTAAGATTAAGGACATCATACGGTGGAAATCGTTCAGGGATTTAGTCGACGAGACGGCGGCTCCGCCGCTTGGTTTCGCTGATTCACCGGATCGTTATACGGCCGTTGCCACGACTACGACGACGACGACGACGACTAGCAGTAATAGTTCGAGCTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAGAGATTGGTCCGACGGCGCAGTGGGAAAAATGTGTTTCTCATGTGTCGGTGAAGATTCGAGGGGAACGAGATCAGCACACGCAGAAAACGACAAAAAGGTGAGAAATAATTCAGTACTTCGCGTTGTAACTTTGGTCAGTTTTTGCCACCCTAGGATCCGGTTTATTTGGTTTGAGATTTAA

mRNA sequence

ATGGCGGCTACTCTCTCATTTCCCCCTCTTCCTTTGAATCGTGAAGGATCCACCAGAATGCTCAAGGATTTTCTTCAGGAAACCAATGCAAATGGAATCGCATCTTCTAAACCTAAACCGGCGTCGTTTAAGACTCTGGCTATCCACGCCGTCGTCGCCGCCGTCAAGAGGATCTCGTTTCCGTCTGTGAAATCGCCAAGGATTTTCCCCAGAAGCTTTTCGCGGAGGCTGTTGAGGAAAAAAGAGAGAGATGAGAGAGAAATCGGAGGCGATTTCGTTGTTAAGATTAAGGACATCATACGGTGGAAATCGTTCAGGGATTTAGTCGACGAGACGGCGGCTCCGCCGCTTGGTTTCGCTGATTCACCGGATCGTTATACGGCCGTTGCCACGACTACGACGACGACGACGACGACTAGCAGTAATAGTTCGAGCTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAGAGATTGGTCCGACGGCGCAGTGGGAAAAATGTGTTTCTCATGTGTCGGTGAAGATTCGAGGGGAACGAGATCAGCACACGCAGAAAACGACAAAAAGGTGAGAAATAATTCAGTACTTCGCGTTGTAACTTTGGTCAGTTTTTGCCACCCTAGGATCCGGTTTATTTGGTTTGAGATTTAA

Coding sequence (CDS)

ATGGCGGCTACTCTCTCATTTCCCCCTCTTCCTTTGAATCGTGAAGGATCCACCAGAATGCTCAAGGATTTTCTTCAGGAAACCAATGCAAATGGAATCGCATCTTCTAAACCTAAACCGGCGTCGTTTAAGACTCTGGCTATCCACGCCGTCGTCGCCGCCGTCAAGAGGATCTCGTTTCCGTCTGTGAAATCGCCAAGGATTTTCCCCAGAAGCTTTTCGCGGAGGCTGTTGAGGAAAAAAGAGAGAGATGAGAGAGAAATCGGAGGCGATTTCGTTGTTAAGATTAAGGACATCATACGGTGGAAATCGTTCAGGGATTTAGTCGACGAGACGGCGGCTCCGCCGCTTGGTTTCGCTGATTCACCGGATCGTTATACGGCCGTTGCCACGACTACGACGACGACGACGACGACTAGCAGTAATAGTTCGAGCTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAGAGATTGGTCCGACGGCGCAGTGGGAAAAATGTGTTTCTCATGTGTCGGTGAAGATTCGAGGGGAACGAGATCAGCACACGCAGAAAACGACAAAAAGGTGAGAAATAATTCAGTACTTCGCGTTGTAACTTTGGTCAGTTTTTGCCACCCTAGGATCCGGTTTATTTGGTTTGAGATTTAA

Protein sequence

MAATLSFPPLPLNREGSTRMLKDFLQETNANGIASSKPKPASFKTLAIHAVVAAVKRISFPSVKSPRIFPRSFSRRLLRKKERDEREIGGDFVVKIKDIIRWKSFRDLVDETAAPPLGFADSPDRYTAVATTTTTTTTTSSNSSSWCESDFTAEDLPSPSWRDWSDGAVGKMCFSCVGEDSRGTRSAHAENDKKVRNNSVLRVVTLVSFCHPRIRFIWFEI

Homology

[Close]

BLAST of Cla021273 vs. TrEMBL
Match: A0A0A0L6C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124790 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80
Identity = 158/203 (77.83%), Postives = 169/203 (83.25%), Query Frame = 1


Query: 2   AATLSFPPLPLNREGSTRMLKDFLQETNANGIASSKPKPASFKTLAIHAVVAAVKRISFP 61
           A TLSFPP PLNRE  TRMLKDFL ETN NG+AS KPKP SFK LA HAVVAAVKRIS P
Sbjct: 3   APTLSFPPFPLNREAPTRMLKDFLHETNPNGLASPKPKPTSFKALAFHAVVAAVKRISLP 62

Query: 62  SVKSPRIFPRSFSRRLLRKKERDEREIGGDFVVKIKDIIRWKSFRDLVDET--AAPPLGF 121
           SVKSPRIFPRS SRRLL+K ERDERE GGDFVVKIKDIIRWKSFRDL+DET  AAPPL F
Sbjct: 63  SVKSPRIFPRSLSRRLLKKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPLDF 122

Query: 122 ADSPDRYTAVA------TTTTTTTTTSSNSSSWCESDFTAEDLPSPSWRDWS-DGAVGKM 181
           A+SPDRYT  A      TTTTTTTT+SS SSSWCESDFTAEDL SPSWRDWS DG +GKM
Sbjct: 123 AESPDRYTYTAAATTTTTTTTTTTTSSSKSSSWCESDFTAEDLASPSWRDWSDDGTMGKM 182

Query: 182 CFSCVGEDSRGTRSAHAENDKKV 196
            F CVGEDS  T +A+A+ND++V
Sbjct: 183 YFPCVGEDSNETTAAYAQNDEEV 205

[Close]

BLAST of Cla021273 vs. TrEMBL
Match: A0A061DUN2_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_005434 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 80/167 (47.90%), Postives = 100/167 (59.88%), Query Frame = 1


Query: 30  ANGIASSKPKPASFKTLAIHAVVAAVKRISFPSVKSPRIFPRSFSRRLLRKKERDEREIG 89
           A  +  S+ K AS       A++ AV+ I F SVKSP I PRS SR+L +K  + E E  
Sbjct: 67  AQQLQRSRSKAASTTISTFQAMIKAVRNIHFTSVKSPSILPRSLSRKLSKKNSQKETET- 126

Query: 90  GDFVVKIKDIIRWKSFRDLVDETAAPPLGFADSPDRYTAVATTTTTTTTT-----SSNSS 149
               V++KDIIRWKS RDLV+E   PP  FA SP   T  +TTTTTTT +     SSNSS
Sbjct: 127 -RTTVRVKDIIRWKSSRDLVEE-KFPPADFASSPHHCTTRSTTTTTTTGSKSTPCSSNSS 186

Query: 150 SWCESDFTAEDLPSPSWRDWSDGAVGKMCFSCVGEDSRGTRSAHAEN 192
           SWC+SDFT+E LPS  + + S+  VGK    CVG+D   T +  A N
Sbjct: 187 SWCDSDFTSEYLPSEEYHE-SEVDVGKKFLPCVGKDPMETTTGLAAN 229

[Close]

BLAST of Cla021273 vs. TrEMBL
Match: A0A061E1G2_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_005434 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 80/167 (47.90%), Postives = 100/167 (59.88%), Query Frame = 1


Query: 30  ANGIASSKPKPASFKTLAIHAVVAAVKRISFPSVKSPRIFPRSFSRRLLRKKERDEREIG 89
           A  +  S+ K AS       A++ AV+ I F SVKSP I PRS SR+L +K  + E E  
Sbjct: 67  AQQLQRSRSKAASTTISTFQAMIKAVRNIHFTSVKSPSILPRSLSRKLSKKNSQKETET- 126

Query: 90  GDFVVKIKDIIRWKSFRDLVDETAAPPLGFADSPDRYTAVATTTTTTTTT-----SSNSS 149
               V++KDIIRWKS RDLV+E   PP  FA SP   T  +TTTTTTT +     SSNSS
Sbjct: 127 -RTTVRVKDIIRWKSSRDLVEE-KFPPADFASSPHHCTTRSTTTTTTTGSKSTPCSSNSS 186

Query: 150 SWCESDFTAEDLPSPSWRDWSDGAVGKMCFSCVGEDSRGTRSAHAEN 192
           SWC+SDFT+E LPS  + + S+  VGK    CVG+D   T +  A N
Sbjct: 187 SWCDSDFTSEYLPSEEYHE-SEVDVGKKFLPCVGKDPMETTTGLAAN 229

[Close]

BLAST of Cla021273 vs. TrEMBL
Match: A0A067K104_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14469 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.4e-24
Identity = 70/148 (47.30%), Postives = 84/148 (56.76%), Query Frame = 1


Query: 47  AIHAVVAAVKRISFPSVKSPRIFPRSFSRRLLRKKERDER----------EIGGDFVVKI 106
           A H+V+ A+K   F SVK+P IFPRS SRRL +K     R          E      V I
Sbjct: 3   AFHSVINALKNFQFTSVKAPSIFPRSISRRLSKKSSASSRDTERASESKLESEVKITVTI 62

Query: 107 KDIIRWKSFRDLVDETAAPPLGFADSPDRYTAVATTTTTTTTTSSNSSSWCESDFTAEDL 166
           KDIIRWKSFRDL++E + PPL  A SP   T  +T + TTT  SSN SSWC+SDFT+E L
Sbjct: 63  KDIIRWKSFRDLMEEKS-PPLDLASSPHHCTTTSTASATTTPCSSNGSSWCDSDFTSEYL 122

Query: 167 P-----SPSWRDWSDGAVGKMCFSCVGE 180
           P     S  + +     VGK    CVGE
Sbjct: 123 PFWNGNSEEYGENEAMEVGKKDLPCVGE 149

[Close]

BLAST of Cla021273 vs. TrEMBL
Match: B9GPU1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15410g PE=4 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 6.1e-23
Identity = 73/165 (44.24%), Postives = 97/165 (58.79%), Query Frame = 1


Query: 30  ANGIAS-----SKPKPASFKTL-AIHAVVAAVKRISFPSVKSPRIFPRSFSRRLLRKK-E 89
           +N IAS     S+ K A+  T+ A  A++ AVK + F ++KSP + PRS SRRL +KK +
Sbjct: 74  SNNIASYKLLKSRSKAAASTTISAFQAMMNAVKNVHFIAIKSPSLLPRSLSRRLSKKKCQ 133

Query: 90  RDEREIGGDFVVKIKDIIRWKSFRDLVDETAAPPLGFADSPDRYTAVATTTTTTTTTSSN 149
             E E+     + +KDIIRWKSFRD+V++  APP     SP   T   TTT +T+TT  +
Sbjct: 134 NKENEV--KMTITVKDIIRWKSFRDIVEDDKAPPSDLPPSPHHCT--TTTTRSTSTTPRS 193

Query: 150 SSSWCESDFTAEDLPSPSWRDWSDGAV------GKMCFSCVGEDS 182
            SSWC+SDF ++ L  PSW    D  V      GK    CVGEDS
Sbjct: 194 GSSWCDSDFNSDYL--PSWNGNFDECVENEVGAGKKFLPCVGEDS 232

[Close]

BLAST of Cla021273 vs. NCBI nr
Match: gi|659075368|ref|XP_008438108.1| (PREDICTED: uncharacterized protein LOC103483313 isoform X1 [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 7.3e-86
Identity = 167/208 (80.29%), Postives = 177/208 (85.10%), Query Frame = 1


Query: 2   AATLSFPPLPLNREGSTRMLKDFLQETNANGIASSKPKPASFKTLAIHAVVAAVKRISFP 61
           A +LSFPP PLNREG TRMLKDFL ETN NGIASSKPKP SFK LA HAVVAAVKRISFP
Sbjct: 3   APSLSFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRISFP 62

Query: 62  SVKSPRIFPRSFSRRLLRKKERDEREIGGDFVVKIKDIIRWKSFRDLVDET--AAPPLGF 121
           SVKSPRIFPRS SRRLLRK ERDERE GGDFVVKIKDIIRWKSFRDL+DET  AAPPL F
Sbjct: 63  SVKSPRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPLDF 122

Query: 122 ADSPDRYT----AVATTTTTTTTTSSNSSSWCESDFTAEDLPSPSWRDWS-DGAVGKMCF 181
           A+SPDRYT    A  TTTTTTTT+SS SSSWCESDFTAEDLPSPSWRDWS DG +GKM F
Sbjct: 123 AESPDRYTYTAAATTTTTTTTTTSSSKSSSWCESDFTAEDLPSPSWRDWSDDGTIGKMYF 182

Query: 182 SCVGEDSRGTRSAHAENDKKVRNNSVLR 203
            CVGEDS  T +AHA+NDK+V  N++ R
Sbjct: 183 RCVGEDSTETTAAHAKNDKEVGINALSR 210

[Close]

BLAST of Cla021273 vs. NCBI nr
Match: gi|659075370|ref|XP_008438109.1| (PREDICTED: uncharacterized protein LOC103483313 isoform X2 [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 3.6e-85
Identity = 165/201 (82.09%), Postives = 173/201 (86.07%), Query Frame = 1


Query: 2   AATLSFPPLPLNREGSTRMLKDFLQETNANGIASSKPKPASFKTLAIHAVVAAVKRISFP 61
           A +LSFPP PLNREG TRMLKDFL ETN NGIASSKPKP SFK LA HAVVAAVKRISFP
Sbjct: 3   APSLSFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRISFP 62

Query: 62  SVKSPRIFPRSFSRRLLRKKERDEREIGGDFVVKIKDIIRWKSFRDLVDET--AAPPLGF 121
           SVKSPRIFPRS SRRLLRK ERDERE GGDFVVKIKDIIRWKSFRDL+DET  AAPPL F
Sbjct: 63  SVKSPRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPLDF 122

Query: 122 ADSPDRYT----AVATTTTTTTTTSSNSSSWCESDFTAEDLPSPSWRDWS-DGAVGKMCF 181
           A+SPDRYT    A  TTTTTTTT+SS SSSWCESDFTAEDLPSPSWRDWS DG +GKM F
Sbjct: 123 AESPDRYTYTAAATTTTTTTTTTSSSKSSSWCESDFTAEDLPSPSWRDWSDDGTIGKMYF 182

Query: 182 SCVGEDSRGTRSAHAENDKKV 196
            CVGEDS  T +AHA+NDK+V
Sbjct: 183 RCVGEDSTETTAAHAKNDKEV 203

[Close]

BLAST of Cla021273 vs. NCBI nr
Match: gi|449432203|ref|XP_004133889.1| (PREDICTED: uncharacterized protein LOC101208043 [Cucumis sativus])

HSP 1 Score: 307.8 bits (787), Expect = 1.6e-80
Identity = 158/203 (77.83%), Postives = 169/203 (83.25%), Query Frame = 1


Query: 2   AATLSFPPLPLNREGSTRMLKDFLQETNANGIASSKPKPASFKTLAIHAVVAAVKRISFP 61
           A TLSFPP PLNRE  TRMLKDFL ETN NG+AS KPKP SFK LA HAVVAAVKRIS P
Sbjct: 3   APTLSFPPFPLNREAPTRMLKDFLHETNPNGLASPKPKPTSFKALAFHAVVAAVKRISLP 62

Query: 62  SVKSPRIFPRSFSRRLLRKKERDEREIGGDFVVKIKDIIRWKSFRDLVDET--AAPPLGF 121
           SVKSPRIFPRS SRRLL+K ERDERE GGDFVVKIKDIIRWKSFRDL+DET  AAPPL F
Sbjct: 63  SVKSPRIFPRSLSRRLLKKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPLDF 122

Query: 122 ADSPDRYTAVA------TTTTTTTTTSSNSSSWCESDFTAEDLPSPSWRDWS-DGAVGKM 181
           A+SPDRYT  A      TTTTTTTT+SS SSSWCESDFTAEDL SPSWRDWS DG +GKM
Sbjct: 123 AESPDRYTYTAAATTTTTTTTTTTTSSSKSSSWCESDFTAEDLASPSWRDWSDDGTMGKM 182

Query: 182 CFSCVGEDSRGTRSAHAENDKKV 196
            F CVGEDS  T +A+A+ND++V
Sbjct: 183 YFPCVGEDSNETTAAYAQNDEEV 205

[Close]

BLAST of Cla021273 vs. NCBI nr
Match: gi|590722615|ref|XP_007051945.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 80/167 (47.90%), Postives = 100/167 (59.88%), Query Frame = 1


Query: 30  ANGIASSKPKPASFKTLAIHAVVAAVKRISFPSVKSPRIFPRSFSRRLLRKKERDEREIG 89
           A  +  S+ K AS       A++ AV+ I F SVKSP I PRS SR+L +K  + E E  
Sbjct: 67  AQQLQRSRSKAASTTISTFQAMIKAVRNIHFTSVKSPSILPRSLSRKLSKKNSQKETET- 126

Query: 90  GDFVVKIKDIIRWKSFRDLVDETAAPPLGFADSPDRYTAVATTTTTTTTT-----SSNSS 149
               V++KDIIRWKS RDLV+E   PP  FA SP   T  +TTTTTTT +     SSNSS
Sbjct: 127 -RTTVRVKDIIRWKSSRDLVEE-KFPPADFASSPHHCTTRSTTTTTTTGSKSTPCSSNSS 186

Query: 150 SWCESDFTAEDLPSPSWRDWSDGAVGKMCFSCVGEDSRGTRSAHAEN 192
           SWC+SDFT+E LPS  + + S+  VGK    CVG+D   T +  A N
Sbjct: 187 SWCDSDFTSEYLPSEEYHE-SEVDVGKKFLPCVGKDPMETTTGLAAN 229

[Close]

BLAST of Cla021273 vs. NCBI nr
Match: gi|590722618|ref|XP_007051946.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 131.0 bits (328), Expect = 2.6e-27
Identity = 80/167 (47.90%), Postives = 100/167 (59.88%), Query Frame = 1


Query: 30  ANGIASSKPKPASFKTLAIHAVVAAVKRISFPSVKSPRIFPRSFSRRLLRKKERDEREIG 89
           A  +  S+ K AS       A++ AV+ I F SVKSP I PRS SR+L +K  + E E  
Sbjct: 67  AQQLQRSRSKAASTTISTFQAMIKAVRNIHFTSVKSPSILPRSLSRKLSKKNSQKETET- 126

Query: 90  GDFVVKIKDIIRWKSFRDLVDETAAPPLGFADSPDRYTAVATTTTTTTTT-----SSNSS 149
               V++KDIIRWKS RDLV+E   PP  FA SP   T  +TTTTTTT +     SSNSS
Sbjct: 127 -RTTVRVKDIIRWKSSRDLVEE-KFPPADFASSPHHCTTRSTTTTTTTGSKSTPCSSNSS 186

Query: 150 SWCESDFTAEDLPSPSWRDWSDGAVGKMCFSCVGEDSRGTRSAHAEN 192
           SWC+SDFT+E LPS  + + S+  VGK    CVG+D   T +  A N
Sbjct: 187 SWCDSDFTSEYLPSEEYHE-SEVDVGKKFLPCVGKDPMETTTGLAAN 229

The following BLAST results are available for this feature:

BLAST of Cla021273 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6C4_CUCSA	1.1e-80	77.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G124790 PE=4 SV=1	[more]
A0A061DUN2_THECC	1.8e-27	47.90	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_005434 PE=4 SV=1	[more]
A0A061E1G2_THECC	1.8e-27	47.90	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_005434 PE=4 SV=1	[more]
A0A067K104_JATCU	9.4e-24	47.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14469 PE=4 SV=1	[more]
B9GPU1_POPTR	6.1e-23	44.24	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s15410g PE=4 SV=2	[more]

BLAST of Cla021273 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075368\|ref\|XP_008438108.1\|	7.3e-86	80.29	PREDICTED: uncharacterized protein LOC103483313 isoform X1 [Cucumis melo]	[more]
gi\|659075370\|ref\|XP_008438109.1\|	3.6e-85	82.09	PREDICTED: uncharacterized protein LOC103483313 isoform X2 [Cucumis melo]	[more]
gi\|449432203\|ref\|XP_004133889.1\|	1.6e-80	77.83	PREDICTED: uncharacterized protein LOC101208043 [Cucumis sativus]	[more]
gi\|590722615\|ref\|XP_007051945.1\|	2.6e-27	47.90	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|590722618\|ref\|XP_007051946.1\|	2.6e-27	47.90	Uncharacterized protein isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021273	Cla021273.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33623	FAMILY NOT NAMED	coord: 47..167 score: 1.7
None	No IPR available	PANTHER	PTHR33623:SF4	SUBFAMILY NOT NAMED	coord: 47..167 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla021273	Cla97C05G082360	Watermelon (97103) v2	wmwmbB206
Cla021273	Csa3G124790	Cucumber (Chinese Long) v2	cuwmB233
Cla021273	MELO3C006152	Melon (DHL92) v3.5.1	mewmB461
Cla021273	ClCG05G001920	Watermelon (Charleston Gray)	wcgwmB286
Cla021273	CSPI03G09200	Wild cucumber (PI 183967)	cpiwmB231
Cla021273	Cucsa.257990	Cucumber (Gy14) v1	cgywmB479
Cla021273	CmaCh06G011110	Cucurbita maxima (Rimu)	cmawmB798
Cla021273	Lsi05G019990	Bottle gourd (USVL1VR-Ls)	lsiwmB365
Cla021273	Cp4.1LG08g01710	Cucurbita pepo (Zucchini)	cpewmB845
Cla021273	CsGy3G009280	Cucumber (Gy14) v2	cgybwmB217
Cla021273	MELO3C006152.2	Melon (DHL92) v3.6.1	medwmB447
Cla021273	Carg23883	Silver-seed gourd	carwmB0483
Cla021273	CsaV3_3G009320	Cucumber (Chinese Long) v3	cucwmB239
Cla021273	Bhi01G000225	Wax gourd	wgowmB214

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021273	Cucumber (Gy14) v2	cgybwmB459
Cla021273	Melon (DHL92) v3.6.1	medwmB096
Cla021273	Silver-seed gourd	carwmB0617
Cla021273	Silver-seed gourd	carwmB1076
Cla021273	Cucumber (Chinese Long) v3	cucwmB517
Cla021273	Watermelon (97103) v2	wmwmbB214
Cla021273	Watermelon (97103) v1	wmwmB137
Cla021273	Cucumber (Gy14) v1	cgywmB663
Cla021273	Cucurbita maxima (Rimu)	cmawmB242
Cla021273	Cucurbita maxima (Rimu)	cmawmB870
Cla021273	Cucurbita moschata (Rifu)	cmowmB231
Cla021273	Cucurbita moschata (Rifu)	cmowmB793
Cla021273	Cucurbita moschata (Rifu)	cmowmB857
Cla021273	Melon (DHL92) v3.5.1	mewmB098
Cla021273	Watermelon (Charleston Gray)	wcgwmB327
Cla021273	Cucumber (Chinese Long) v2	cuwmB493
Cla021273	Cucurbita pepo (Zucchini)	cpewmB332
Cla021273	Cucurbita pepo (Zucchini)	cpewmB613
Cla021273	Bottle gourd (USVL1VR-Ls)	lsiwmB022