Carg23883 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23883
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ankyrin repeat domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_252 : 35213 .. 37016 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATTAAAATAAAGCAAAAAACGAAGCATCCTCGTTACCTTCATCTTCTTCACTCCTTTTGTCTTTTTCCCTCTGAATCTTTGATCCGCCATGGCTGAGCTCTGACACCCATCAGAGCTTTTTCGACCCATTATCGAAGCTGCCTCCCACTTTCCTCTTTCAATTGGTTTATATATATAAATCCATCACTCCCACTCACTTCACTCACTTGAAATCAAATTCAATTCCATTTTCATTTCTTGATTTAGTAATTCCTCTGTTCTTGAAGCTGCTTCTATGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCTCTGTCATTTTCCCCTTTTCATTTGGATGACGCTGCCTCGACCAGAATGCTGAAGGATTTTCTTCAGGAAAGTAATGGAAATGGAGAATCGAAAACGGCGTCGTTTGTTAAGAGGATCTCGTTTCCGTCGCTGAAATTGCGAAGGATTCTTCCGAGAAGCCTTTCGCGGCGGCTGTCGGGGATGAGAGAGAGAGATGAGAGAGAAACCGGCGGCGATTTCGTTGTTAAAGTGAAGGACATTATTCGGTGGAGATCGTTTAGGGATTTGGTCGACGAGACGGCGGAAATGGCGGCTCCGCCGCTTGATTTCGCTGATTCGCCGGGTCGTTATACGGCCGCCGCTACTACTACGACGACCACGACGGCAACTAATAGCAACAGTTCGAGTTGGTGCGAGAGTGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAAAGGTTGCTCCGACGACGATGAGACGGGGAAAGTATATTTCTCTTGTGTCGGTGAAGATTCGTCGGAAACGCCCGTAACAAACTCAGAAAACGACAAAAAGGTGAGCAATAATTGAGTTCTTCGCACTTACGATGAAAAAGGCCTTTTTAACTTTCTTTGACTTTTCATGACCGTCAGATCTATTTTATTTTGCAAGAAATTTGCGAACCGTGTGATTAGATCAAATTTTTCTCGCAATACTAGATTCGTCCGTAGAGTACCACACTGGAACTGAAATTAAATATTTTAAAATAGGGAATTTTATTTTATAATAATAATAAATAATGTATTTATTATTTGATAAAAAATTTACAAATTAATATATTTTATAATAAAATAAATTATGTTTATTTATATTTTTTTTTTCTTATAATAAATAATAAATTTTATTATTTATTATAATTAAAAAAAATTCAATTATTTAACAACATTTTGAATCATTTTCCAGGTAAACTTATTATCCCTTGACAATAAAGGCGAACAAAGTGCTCGACGACTATTAGAACGTATCGACGAAACAATTTCATTATCACGAAGTTACAAGTTAATGGAACTGTTTCAACAAGAACGTCCGTATTATCGAGAAAGTGAAGACGATGAAGAACGGGATAAAAACAATAGCATGGGAAAAGCTAAAGAAGACGGAAATGAGTTGTTTCTACGCGAATTTTCGTACCAGCAAGCAAGTGACAGCGAGGAAGAACGAGATAATAATAATGGGAAAATTAGCACGACGGGAGCTGAAGAAGATGAAAACGAATTGTTTCGACGAGAATTCCCGTGTTATCGAGATAGTAAACACGACGGAGAACGAGATGAATCGAACCGAAATGATTTTGGATGGATTTTGTCACAAAAGGGAAAGGAAAATCTTTGGAGAGAGATGGAGAGAGAAGGGAAATGGGGAGTGTTTGGTAACGAGGAGAGAGAAGAATTAGGATTAGAAATTGAAGGGGGAATTTTTGGATGTTTGGTTGATGAAATTATGCTTGATATTTTCCTATTATCAGTATAA

mRNA sequence

TGGATTAAAATAAAGCAAAAAACGAAGCATCCTCGTTACCTTCATCTTCTTCACTCCTTTTGTCTTTTTCCCTCTGAATCTTTGATCCGCCATGGCTGAGCTCTGACACCCATCAGAGCTTTTTCGACCCATTATCGAAGCTGCCTCCCACTTTCCTCTTTCAATTGGTTTATATATATAAATCCATCACTCCCACTCACTTCACTCACTTGAAATCAAATTCAATTCCATTTTCATTTCTTGATTTAGTAATTCCTCTGTTCTTGAAGCTGCTTCTATGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCTCTGTCATTTTCCCCTTTTCATTTGGATGACGCTGCCTCGACCAGAATGCTGAAGGATTTTCTTCAGGAAAGTAATGGAAATGGAGAATCGAAAACGGCGTCGTTTGTTAAGAGGATCTCGTTTCCGTCGCTGAAATTGCGAAGGATTCTTCCGAGAAGCCTTTCGCGGCGGCTGTCGGGGATGAGAGAGAGAGATGAGAGAGAAACCGGCGGCGATTTCGTTGTTAAAGTGAAGGACATTATTCGGTGGAGATCGTTTAGGGATTTGGTCGACGAGACGGCGGAAATGGCGGCTCCGCCGCTTGATTTCGCTGATTCGCCGGGTCGTTATACGGCCGCCGCTACTACTACGACGACCACGACGGCAACTAATAGCAACAGTTCGAGTTGGTGCGAGAGTGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAAAGGTTGCTCCGACGACGATGAGACGGGGAAAGTATATTTCTCTTGTGTCGGTGAAGATTCGTCGGAAACGCCCGTAACAAACTCAGAAAACGACAAAAAGGTAAACTTATTATCCCTTGACAATAAAGGCGAACAAAGTGCTCGACGACTATTAGAACGTATCGACGAAACAATTTCATTATCACGAAGTTACAAGTTAATGGAACTGTTTCAACAAGAACGTCCGTATTATCGAGAAAGTGAAGACGATGAAGAACGGGATAAAAACAATAGCATGGGAAAAGCTAAAGAAGACGGAAATGAGTTGTTTCTACGCGAATTTTCGTACCAGCAAGCAAGTGACAGCGAGGAAGAACGAGATAATAATAATGGGAAAATTAGCACGACGGGAGCTGAAGAAGATGAAAACGAATTGTTTCGACGAGAATTCCCGTGTTATCGAGATAGTAAACACGACGGAGAACGAGATGAATCGAACCGAAATGATTTTGGATGGATTTTGTCACAAAAGGGAAAGGAAAATCTTTGGAGAGAGATGGAGAGAGAAGGGAAATGGGGAGTGTTTGGTAACGAGGAGAGAGAAGAATTAGGATTAGAAATTGAAGGGGGAATTTTTGGATGTTTGGTTGATGAAATTATGCTTGATATTTTCCTATTATCAGTATAA

Coding sequence (CDS)

ATGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCTCTGTCATTTTCCCCTTTTCATTTGGATGACGCTGCCTCGACCAGAATGCTGAAGGATTTTCTTCAGGAAAGTAATGGAAATGGAGAATCGAAAACGGCGTCGTTTGTTAAGAGGATCTCGTTTCCGTCGCTGAAATTGCGAAGGATTCTTCCGAGAAGCCTTTCGCGGCGGCTGTCGGGGATGAGAGAGAGAGATGAGAGAGAAACCGGCGGCGATTTCGTTGTTAAAGTGAAGGACATTATTCGGTGGAGATCGTTTAGGGATTTGGTCGACGAGACGGCGGAAATGGCGGCTCCGCCGCTTGATTTCGCTGATTCGCCGGGTCGTTATACGGCCGCCGCTACTACTACGACGACCACGACGGCAACTAATAGCAACAGTTCGAGTTGGTGCGAGAGTGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAAAGGTTGCTCCGACGACGATGAGACGGGGAAAGTATATTTCTCTTGTGTCGGTGAAGATTCGTCGGAAACGCCCGTAACAAACTCAGAAAACGACAAAAAGGTAAACTTATTATCCCTTGACAATAAAGGCGAACAAAGTGCTCGACGACTATTAGAACGTATCGACGAAACAATTTCATTATCACGAAGTTACAAGTTAATGGAACTGTTTCAACAAGAACGTCCGTATTATCGAGAAAGTGAAGACGATGAAGAACGGGATAAAAACAATAGCATGGGAAAAGCTAAAGAAGACGGAAATGAGTTGTTTCTACGCGAATTTTCGTACCAGCAAGCAAGTGACAGCGAGGAAGAACGAGATAATAATAATGGGAAAATTAGCACGACGGGAGCTGAAGAAGATGAAAACGAATTGTTTCGACGAGAATTCCCGTGTTATCGAGATAGTAAACACGACGGAGAACGAGATGAATCGAACCGAAATGATTTTGGATGGATTTTGTCACAAAAGGGAAAGGAAAATCTTTGGAGAGAGATGGAGAGAGAAGGGAAATGGGGAGTGTTTGGTAACGAGGAGAGAGAAGAATTAGGATTAGAAATTGAAGGGGGAATTTTTGGATGTTTGGTTGATGAAATTATGCTTGATATTTTCCTATTATCAGTATAA

Protein sequence

MAAAAAAAAAAALSFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGMRERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAAATTTTTTTATNSNSSSWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDSSETPVTNSENDKKVNLLSLDNKGEQSARRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNSMGKAKEDGNELFLREFSYQQASDSEEERDNNNGKISTTGAEEDENELFRREFPCYRDSKHDGERDESNRNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLDIFLLSV

Homology

[Close]

BLAST of Carg23883 vs. NCBI nr
Match: XP_023539353.1 (uncharacterized protein LOC111800011 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.0 bits (1312), Expect = 7.0e-141
Identity = 320/366 (87.43%), Postives = 320/366 (87.43%), Query Frame = 0


Query: 14  SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 73
           SFSPFHLD AASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM
Sbjct: 13  SFSPFHLDHAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 72

Query: 74  RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAXXXXXXXXX 133
           RERDERET GDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAXXXXXXXXX
Sbjct: 73  RERDERETSGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAXXXXXXXXX 132

Query: 134 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDSSETPVTNSENDKKVN 193
           XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDE GKVYFSCVGEDSSETPVTNS NDKKVN
Sbjct: 133 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDEAGKVYFSCVGEDSSETPVTNSVNDKKVN 192

Query: 194 LLSLDNKGEQSARRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNSMGKA 253
           LLS DNKGEQSARRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERD  NS GKA
Sbjct: 193 LLSRDNKGEQSARRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERD--NSTGKA 252

Query: 254 KEDGNXXXXXXXXXXXXXXXXXXXXXXXXKISTTXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           KEDGN                                    XXXXXXXXXXXXXXXXXXX
Sbjct: 253 KEDGN------------------------------------XXXXXXXXXXXXXXXXXXX 312

Query: 314 XXXXXNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLD 373
           XXXXX DFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLD
Sbjct: 313 XXXXXXDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLD 340

Query: 374 IFLLSV 380
           IF LSV
Sbjct: 373 IFPLSV 340

[Close]

BLAST of Carg23883 vs. NCBI nr
Match: XP_022961190.1 (uncharacterized protein LOC111461748 isoform X1 [Cucurbita moschata])

HSP 1 Score: 503.1 bits (1294), Expect = 8.5e-139
Identity = 346/370 (93.51%), Postives = 346/370 (93.51%), Query Frame = 0


Query: 14  SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 73
           SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM
Sbjct: 8   SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 67

Query: 74  RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAXXXXXXXXX 133
           RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSP RYTAXXXXXXXXX
Sbjct: 68  RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPDRYTAXXXXXXXXX 127

Query: 134 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDSSETPVTNSENDKKVN 193
           XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGED SETPVTNSENDKKVN
Sbjct: 128 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDLSETPVTNSENDKKVN 187

Query: 194 LLSLDNKG----EQSARRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNS 253
           LLS DNKG               DETISLSRSYKLMELFQQERPYYRESEDDEERDKNNS
Sbjct: 188 LLSRDNKGXXXXXXXXXXXXXXXDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNS 247

Query: 254 MGKAKEDGNXXXXXXXXXXXXXXXXXXXXXXXXKISTTXXXXXXXXXXXXXXXXXXXXXX 313
            GKAKEDGNXXXXXXXXXXXXXXXXXXXXXXXXKI   XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 248 TGKAKEDGNXXXXXXXXXXXXXXXXXXXXXXXXKIXXXXXXXXXXXXXXXXXXXXXXXXX 307

Query: 314 XXXXXXXXXNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDE 373
           XXXXXXXXX DFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDE
Sbjct: 308 XXXXXXXXXXDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDE 367

Query: 374 IMLDIFLLSV 380
           IMLDIF LSV
Sbjct: 368 IMLDIFPLSV 377

[Close]

BLAST of Carg23883 vs. NCBI nr
Match: XP_022961277.1 (uncharacterized protein LOC111461748 isoform X2 [Cucurbita moschata])

HSP 1 Score: 496.9 bits (1278), Expect = 6.1e-137
Identity = 314/370 (84.86%), Postives = 314/370 (84.86%), Query Frame = 0


Query: 14  SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 73
           SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM
Sbjct: 8   SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 67

Query: 74  RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAXXXXXXXXX 133
           RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSP RYTAXXXXXXXXX
Sbjct: 68  RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPDRYTAXXXXXXXXX 127

Query: 134 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDSSETPVTNSENDKKVN 193
           XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGED SETPVTNSENDKKVN
Sbjct: 128 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDLSETPVTNSENDKKVN 187

Query: 194 LLSLDNKG----EQSARRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNS 253
           LLS DNKG               DETISLSRSYKLMELFQQERPYYRESEDDEERDKNNS
Sbjct: 188 LLSRDNKGXXXXXXXXXXXXXXXDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNS 247

Query: 254 MGKAKEDGNXXXXXXXXXXXXXXXXXXXXXXXXKISTTXXXXXXXXXXXXXXXXXXXXXX 313
            GKAKEDGN                                    XXXXXXXXXXXXXXX
Sbjct: 248 TGKAKEDGN------------------------------------XXXXXXXXXXXXXXX 307

Query: 314 XXXXXXXXXNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDE 373
           XXXXXXXXXNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDE
Sbjct: 308 XXXXXXXXXNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDE 341

Query: 374 IMLDIFLLSV 380
           IMLDIF LSV
Sbjct: 368 IMLDIFPLSV 341

[Close]

BLAST of Carg23883 vs. NCBI nr
Match: XP_022974182.1 (uncharacterized protein LOC111472764 isoform X2 [Cucurbita maxima])

HSP 1 Score: 480.3 bits (1235), Expect = 5.9e-132
Identity = 327/367 (89.10%), Postives = 334/367 (91.01%), Query Frame = 0


Query: 14  SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 73
           SFSPFHLDDAAS RMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM
Sbjct: 9   SFSPFHLDDAASPRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 68

Query: 74  RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAXXXXXXXXX 133
           RERDERETG DFVVKVKDIIRWRSFRDLVDETAEMA  PLDFADSPGRYTAXXXXXXXXX
Sbjct: 69  RERDERETGDDFVVKVKDIIRWRSFRDLVDETAEMAVSPLDFADSPGRYTAXXXXXXXXX 128

Query: 134 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDSSETPVTNSENDKKVN 193
           XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDE GKVYFSCVGEDSSETPVTNSENDKKVN
Sbjct: 129 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDEAGKVYFSCVGEDSSETPVTNSENDKKVN 188

Query: 194 LLSLDNKGEQSAR-RLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNSMGK 253
           LLS+DNK EQS + RL + IDETISLSRSYKLMELFQQERPYYRESEDDE+RD+NNSMGK
Sbjct: 189 LLSIDNKVEQSVKERLFQHIDETISLSRSYKLMELFQQERPYYRESEDDEDRDRNNSMGK 248

Query: 254 AKEDGNXXXXXXXXXXXXXXXXXXXXXXXXKISTTXXXXXXXXXXXXXXXXXXXXXXXXX 313
            KEDGN    XXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXX
Sbjct: 249 VKEDGN----XXXXXXXXXXXXXXXXXXXXXXXXXTIGMXXXXXXXXXXXXXXXXXXXXX 308

Query: 314 XXXXXXNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIML 373
           XXXXXX      LSQKG EN+WREMEREGKWGVFGNEEREELGLEIE GIFGCLVDEIML
Sbjct: 309 XXXXXXXXXXXXLSQKGNENVWREMEREGKWGVFGNEEREELGLEIEEGIFGCLVDEIML 368

Query: 374 DIFLLSV 380
           DIF LS+
Sbjct: 369 DIFQLSL 371

[Close]

BLAST of Carg23883 vs. NCBI nr
Match: XP_022974183.1 (uncharacterized protein LOC111472764 isoform X3 [Cucurbita maxima])

HSP 1 Score: 454.5 bits (1168), Expect = 3.5e-124
Identity = 311/367 (84.74%), Postives = 316/367 (86.10%), Query Frame = 0


Query: 14  SFSPFHLDDAASTRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 73
           SFSPFHLDDAAS RMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM
Sbjct: 9   SFSPFHLDDAASPRMLKDFLQESNGNGESKTASFVKRISFPSLKLRRILPRSLSRRLSGM 68

Query: 74  RERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTAXXXXXXXXX 133
           RERDERETG DFVVKVKDIIRWRSFRDLVDETAEMA  PLDFADSPGRYTAXXXXXXXXX
Sbjct: 69  RERDERETGDDFVVKVKDIIRWRSFRDLVDETAEMAVSPLDFADSPGRYTAXXXXXXXXX 128

Query: 134 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDSSETPVTNSENDKKVN 193
           XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDE GKVYFSCVGEDSSETPVTNSENDKKVN
Sbjct: 129 XXXXXXXXWCESDFTAEDLPSPSWKGCSDDDEAGKVYFSCVGEDSSETPVTNSENDKKVN 188

Query: 194 LLSLDNKGEQSAR-RLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNSMGK 253
           LLS+DNK EQS + RL + IDETISLSRSYKLMELFQQERPYYRESE             
Sbjct: 189 LLSIDNKVEQSVKERLFQHIDETISLSRSYKLMELFQQERPYYRESEXXXXXXXXXXXXX 248

Query: 254 AKEDGNXXXXXXXXXXXXXXXXXXXXXXXXKISTTXXXXXXXXXXXXXXXXXXXXXXXXX 313
                 XXXXXXXXXXXXXXXXXX                  XXXXXXXXXXXXXXXXXX
Sbjct: 249 XXXXXXXXXXXXXXXXXXXXXXXXG----------KVKEDGNXXXXXXXXXXXXXXXXXX 308

Query: 314 XXXXXXNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIML 373
           XXXXX NDFGWILSQKG EN+WREMEREGKWGVFGNEEREELGLEIE GIFGCLVDEIML
Sbjct: 309 XXXXXRNDFGWILSQKGNENVWREMEREGKWGVFGNEEREELGLEIEEGIFGCLVDEIML 365

Query: 374 DIFLLSV 380
           DIF LS+
Sbjct: 369 DIFQLSL 365

[Close]

BLAST of Carg23883 vs. TrEMBL
Match: tr|A0A1S3AVN8|A0A1S3AVN8_CUCME (uncharacterized protein LOC103483313 OS=Cucumis melo OX=3656 GN=LOC103483313 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 9.8e-67
Identity = 195/399 (48.87%), Postives = 232/399 (58.15%), Query Frame = 0


Query: 14  SFSPFHLDDAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISFPSLKL 73
           SF PF L+    TRMLKDFL E+N NG    + K  SF           VKRISFPS+K 
Sbjct: 7   SFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRISFPSVKS 66

Query: 74  RRILPRSLSRRLSGMRERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADS 133
            RI PRSLSRRL    ERDERETGGDFVVK+KDIIRW+SFRDL+DET   AAPPLDFA+S
Sbjct: 67  PRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETT-AAAPPLDFAES 126

Query: 134 PGRYT----AXXXXXXXXXXXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCV 193
           P RYT     XXXXXXXXXXXXXXXXXWCESDFTAEDLPSPSW+  SDD   GK+YF CV
Sbjct: 127 PDRYTYXXXXXXXXXXXXXXXXXXXXXWCESDFTAEDLPSPSWRDWSDDGTIGKMYFRCV 186

Query: 194 GEDSSETPVTNSENDKKVNLLSL---DNKGEQ-----SARRLLERIDETISLSRSYK--- 253
           GEDS+ET   +++NDK+V + +L   ++K EQ     S RRLLE++   ISLS S +   
Sbjct: 187 GEDSTETTAAHAKNDKEVGINALSRREDKEEQEVLDESTRRLLEQVKGVISLSESCRLAE 246

Query: 254 -------LMELFQQERPYYRESEDDEERDKNNSMGKAKEDGNXXXXXXXXXXXXXXXXXX 313
                  L ELF+++   +++ +DD  R KN   G+   D                    
Sbjct: 247 HCGLDGLLRELFRRDLASFQD-DDDRIRMKNGKDGEYVYD-------------------- 306

Query: 314 XXXXXXKISTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFGWILSQKGKENLWRE 373
                                                         W LS KGKE+  RE
Sbjct: 307 ----------------------------------------------WFLSHKGKESYVRE 337

Query: 374 MEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLDIF 376
           MEREGKW +FG +E+ +LGLEIEG + GCLVDEI+LDIF
Sbjct: 367 MEREGKWEIFGVDEKIDLGLEIEGEVLGCLVDEILLDIF 337

[Close]

BLAST of Carg23883 vs. TrEMBL
Match: tr|A0A0A0L6C4|A0A0A0L6C4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124790 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.9e-65
Identity = 195/401 (48.63%), Postives = 233/401 (58.10%), Query Frame = 0


Query: 14  SFSPFHLDDAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISFPSLKL 73
           SF PF L+  A TRMLKDFL E+N NG    + K  SF           VKRIS PS+K 
Sbjct: 7   SFPPFPLNREAPTRMLKDFLHETNPNGLASPKPKPTSFKALAFHAVVAAVKRISLPSVKS 66

Query: 74  RRILPRSLSRRLSGMRERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPLDFADS 133
            RI PRSLSRRL    ERDERETGGDFVVK+KDIIRW+SFRDL+DET   AAPPLDFA+S
Sbjct: 67  PRIFPRSLSRRLLKKTERDERETGGDFVVKIKDIIRWKSFRDLIDETT-AAAPPLDFAES 126

Query: 134 PGRYT------AXXXXXXXXXXXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFS 193
           P RYT       XXXXXXXXXXXXXXXXXWCESDFTAEDL SPSW+  SDD   GK+YF 
Sbjct: 127 PDRYTYXXXXXXXXXXXXXXXXXXXXXXXWCESDFTAEDLASPSWRDWSDDGTMGKMYFP 186

Query: 194 CVGEDSSETPVTNSENDKKVNLLSL--DNKG----EQSARRLLERIDETISLSRSYKLM- 253
           CVGEDS+ET    ++ND++VN L +  DN+     ++S RRLLE++   ISLS+S +L+ 
Sbjct: 187 CVGEDSNETTAAYAQNDEEVNALLIREDNEEQEVLDESTRRLLEQVKGAISLSKSCRLVE 246

Query: 254 ---------ELFQQERPYYRESEDDEERDKNNSMGKAKEDGNXXXXXXXXXXXXXXXXXX 313
                    ELF++E     + +D +ER +N+      ++G                   
Sbjct: 247 RCGLDWLIRELFRRE---LADVQDVDERVRNDDRRIRVKNGKDDEYVC------------ 306

Query: 314 XXXXXXKISTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDFGWILSQKGKENLWRE 373
                                                         W LS KGKE+  RE
Sbjct: 307 ---------------------------------------------DWFLSHKGKESYVRE 346

Query: 374 MEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLDIFLL 378
           MEREGKW +FG +E+ ELGLEIEG I GCLVDEI+LDIF L
Sbjct: 367 MEREGKWEIFGVDEKIELGLEIEGEILGCLVDEILLDIFSL 346

[Close]

BLAST of Carg23883 vs. TrEMBL
Match: tr|A0A2P4LUH5|A0A2P4LUH5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_22798 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.1e-12
Identity = 99/357 (27.73%), Postives = 134/357 (37.54%), Query Frame = 0


Query: 53  FPSLKLRRILPRSLSRRLSGMRERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPP 112
           FP  K   ILPRSLSRRLS      E+ +     ++VKDIIRW SFRDLV+E ++    P
Sbjct: 92  FPLKKSSSILPRSLSRRLS-----KEKPSEVKITIRVKDIIRWTSFRDLVEEKSQ----P 151

Query: 113 LDFADSPGR-YTAXXXXXXXXXXXXXXXXXWCESDFTAEDLPSPSWKGCSDDD-----ET 172
           LDF  SP    T                  WCESDFT+E L  PSW G S D+     E 
Sbjct: 152 LDFNSSPNHCTTTTITTGSTNTMCSSNSSSWCESDFTSEYL--PSWGGNSRDNVVNEVEV 211

Query: 173 GKVYFSCVGEDSSETPV----------------TNSENDKKVNLLSLD-NKGEQ------ 232
           GK Y   VGED  +T                     E    V++L+    +GE+      
Sbjct: 212 GKKYLPRVGEDCLKTTTGTETYADVGPKGELWCDEKEQQSPVSVLNFQVGEGEEPFSSFT 271

Query: 233 ----SARRLLERIDETISLSRSYKLMELFQQERPYYRESEDDEERDKNNSMGKAKEDGNX 292
               +  R  + + + I L  S   +E F QE     E     E +          +   
Sbjct: 272 RSLANMERTRQNLMQKIQLFESLAKLEPFNQEEWMSMEENTKFEEEXXXXXXXXVSELFV 331

Query: 293 XXXXXXXXXXXXXXXXXXXXXXXKISTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 352
                                  +++T                                 
Sbjct: 332 KTISSVDIGNAGVELLLLDFFRDELTTKRCQTKRDDDEFDCEMVSMAKAWVRGEQNGLHE 391

Query: 353 DFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIMLDIFL 377
              W +  K +E    +M+R   W  F  EE+EEL  E E GI G L+DE+++D+FL
Sbjct: 392 ---WGIEHK-REAYISDMDRREGWSNF-KEEQEELAFEFESGILGDLLDEVLVDLFL 432

[Close]

BLAST of Carg23883 vs. TrEMBL
Match: tr|A0A166FGB5|A0A166FGB5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_008585 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.5e-11
Identity = 115/377 (30.50%), Postives = 156/377 (41.38%), Query Frame = 0


Query: 27  RMLKDFLQESNGNGESKTASF------------------VKRISF-PSLKLRRILPRSLS 86
           RMLKDFL +   N  SK  SF                  +K + F  ++K   ILPRS++
Sbjct: 13  RMLKDFLAD---NSHSKRVSFFQDNLNMTFSNSGFSKFLIKYLPFTTNIKPPSILPRSIT 72

Query: 87  RRLSGMRERDERETGGDFV--VKVKDIIRWRSFRDLVDETAEMAAPPLDFADSPGRYTA- 146
           +RLS  R         +    VKVKDI+RWRSFRDL    AE+ + PL+F+ SP   T  
Sbjct: 73  KRLSKSRSVSRNVNMKELTAKVKVKDILRWRSFRDL----AEVESQPLNFSSSPHHCTTX 132

Query: 147 XXXXXXXXXXXXXXXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDSSETPVT 206
           XXXXXXXXX        WC+SDFTAEDL  PSW  CS +  T K  + C  E    +PV+
Sbjct: 133 XXXXXXXXXTSNSGRSSWCDSDFTAEDL--PSW--CS-NSVTPKGKWLCDEEKEQNSPVS 192

Query: 207 -----NSENDKKVNLLSLDNKGEQSARRLLERIDETISLSRSYKLMELFQQERPYYRESE 266
                + E+++  +         Q+ RR            +     ELF  +   + E E
Sbjct: 193 VLDCFSEEDEESFSYF------HQTPRR------------KQAGTTELFVNKTHKHEEPE 252

Query: 267 DDEERDKNNSMGKAKEDGNXXXXXXXXXXXXXXXXXXXXXXXXKISTTXXXXXXXXXXXX 326
           +  E      + + K +                          ++               
Sbjct: 253 NRAEEKAMQLLNQVKTN---------------------ISGYLEVEEEFLLLDFFSEQLT 312

Query: 327 XXXXXXXXXXXXXXXXXXXNDFG---WILSQKGKENLWREMEREGKWGVFGNEEREELGL 374
                               D G   W L  K KE   R+MER  KW  F +E+ +ELGL
Sbjct: 313 ENKKGDYELTKVANEWIKGEDEGCLEWKLVGK-KEFSIRDMERGVKWNKF-DEDEQELGL 336

[Close]

BLAST of Carg23883 vs. TrEMBL
Match: tr|A0A1U8HSF7|A0A1U8HSF7_GOSHI (uncharacterized protein LOC107887223 OS=Gossypium hirsutum OX=3635 GN=LOC107887223 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.0e-10
Identity = 73/171 (42.69%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 33  LQESNGNGESKTAS-------FVKRISFPSLKLRRILPRSLSRRLSGMRERDERETGGDF 92
           LQ S     S T S        +K I F S     +LPR+LSR+ S  +    +E     
Sbjct: 48  LQRSRSKAASATISAFQAMINVIKSIHFASSTPSILLPRTLSRKPSKRKISQNKEAEIKM 107

Query: 93  VVKVKDIIRWRSFRDLVDETAEMAAPPLDFADS--------PGRYTAXXXXXXXXXXXXX 152
            V VKDIIRW+SFRDL++E ++    P D A S              XXXXXXXXXXXXX
Sbjct: 108 TVTVKDIIRWKSFRDLLEEKSQ----PSDLAPSXXXXXXXXXXXXXXXXXXXXXXXXXXX 167

Query: 153 XXXXWCESDFTAEDLPSPSWKGCSDDDETGKVYFSCVGEDSSETPVTNSEN 189
           XXX WC+SDFT+E LPS  +     D+  GK++  CVGED+ ET    + N
Sbjct: 168 XXXSWCDSDFTSEYLPSDEYGENEVDNMVGKIFSPCVGEDTMETTTRTAAN 214

The following BLAST results are available for this feature:

BLAST of Carg23883 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539353.1	7.0e-141	87.43	uncharacterized protein LOC111800011 [Cucurbita pepo subsp. pepo]	[more]
XP_022961190.1	8.5e-139	93.51	uncharacterized protein LOC111461748 isoform X1 [Cucurbita moschata]	[more]
XP_022961277.1	6.1e-137	84.86	uncharacterized protein LOC111461748 isoform X2 [Cucurbita moschata]	[more]
XP_022974182.1	5.9e-132	89.10	uncharacterized protein LOC111472764 isoform X2 [Cucurbita maxima]	[more]
XP_022974183.1	3.5e-124	84.74	uncharacterized protein LOC111472764 isoform X3 [Cucurbita maxima]	[more]

BLAST of Carg23883 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg23883 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg23883 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVN8\|A0A1S3AVN8_CUCME	9.8e-67	48.87	uncharacterized protein LOC103483313 OS=Cucumis melo OX=3656 GN=LOC103483313 PE=...	[more]
tr\|A0A0A0L6C4\|A0A0A0L6C4_CUCSA	1.9e-65	48.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124790 PE=4 SV=1	[more]
tr\|A0A2P4LUH5\|A0A2P4LUH5_QUESU	3.1e-12	27.73	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_22798 PE=4 SV=1	[more]
tr\|A0A166FGB5\|A0A166FGB5_DAUCA	4.5e-11	30.50	Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_008585 ...	[more]
tr\|A0A1U8HSF7\|A0A1U8HSF7_GOSHI	1.0e-10	42.69	uncharacterized protein LOC107887223 OS=Gossypium hirsutum OX=3635 GN=LOC1078872...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23883-RA	Carg23883-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..261
None	No IPR available	PANTHER	PTHR33623:SF4	SUBFAMILY NOT NAMED	coord: 46..375
None	No IPR available	PANTHER	PTHR33623	FAMILY NOT NAMED	coord: 46..375

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23883	Cla021273	Watermelon (97103) v1	carwmB0483
Carg23883	Csa3G124790	Cucumber (Chinese Long) v2	carcuB0518
Carg23883	MELO3C006152	Melon (DHL92) v3.5.1	carmeB0494
Carg23883	ClCG05G001920	Watermelon (Charleston Gray)	carwcgB0472
Carg23883	CSPI03G09200	Wild cucumber (PI 183967)	carcpiB0525
Carg23883	Cucsa.257990	Cucumber (Gy14) v1	carcgyB0559
Carg23883	CmaCh06G011110	Cucurbita maxima (Rimu)	carcmaB0679
Carg23883	Lsi05G019990	Bottle gourd (USVL1VR-Ls)	carlsiB442
Carg23883	Cp4.1LG08g01710	Cucurbita pepo (Zucchini)	carcpeB0687
Carg23883	CsGy3G009280	Cucumber (Gy14) v2	carcgybB0495
Carg23883	MELO3C006152.2	Melon (DHL92) v3.6.1	carmedB0500
Carg23883	CsaV3_3G009320	Cucumber (Chinese Long) v3	carcucB0524
Carg23883	Cla97C05G082360	Watermelon (97103) v2	carwmbB0511
Carg23883	Bhi01G000225	Wax gourd	carwgoB0591

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23883	Silver-seed gourd	carcarB474
Carg23883	Cucurbita maxima (Rimu)	carcmaB0678
Carg23883	Cucurbita moschata (Rifu)	carcmoB0659
Carg23883	Cucurbita moschata (Rifu)	carcmoB0661
Carg23883	Cucurbita pepo (Zucchini)	carcpeB0685