Cp4.1LG08g00670 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g00670
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG08 : 4026163 .. 4028163 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATCTTCCTCGTTTTGGTCGAACATGGAACCGTTTCTCTTCCCTGCCCCGCCCTGGCACGGCCCCACGGCTTGATGTTCCGCCGCCGGCTGCCGCGTCGGAGCCGGAAGTTTATCCACCGCCTCCGCGCACTGCCAATGTTCTTCAAACTTCTCCTATTAAAGAAAGGTCTCCTCGAATCCCATCTCCGGTTAGGAAATATCCCTCGCCTCCTACTTCTCCCAAATATAGGGCGGCTGCCCCCAGCACTTCGCCCCGCAAGCCACTATCTCCTCCTCCGACGTATAACCGTTACGACGGAGAACGGCGGACCAGTGCTTTAGCTTCTCCTAAAACGTTCAAAACTACCTATACCTCTCCGCCACGATCACCGGCGAAACATAAATATTCCACCTCCACTCTCCAAGCACCACTCTCTCCTCTGGCTCTGCCTAGCTTGGAGAAGAGACATGAACCTGAGCCTATGGTTCGACCCAGGAGCCCACCGGAGGTTAGTTCAATTATAATTTATATTTAATTTATTTTTATATACATTCTTGTCACTTTTCTTAATAAGAATATAATATAACAATTTAACCTTTCACTCAAAAATTTATGTTTCTTAATTAATAATTGAGCTATACTTTTTTTCTGCCAAGACATGGTACATTCTACTTTCTTAATTAATTAATATATATATATATATATATGTATGTATGTATGTATATGCATATAAAAAATGTAAGAGTCTAGTTCTTTTCGATCTTACAATCCACCTTCTTTGTGATCTAGTGTTCTCGCTAACATTCGTTCACTTTTTTAATTGACGTGGGACCCTCCCAATCTATCCCCTTCCATGCTCAACATTCTTTCTGGCACACTGTCTCGTGTCTACCCCCTTCCAATCGATGTGGGACTCCTCCCAATCCACCCCCTTTCAATCTCCCGTGTTTTGCTGGCACATTGCCTTATGTCCAACCCCTTTGGAGTTTAGGGTCCTCGTTGGTACATCACCAAGAGTGTTTTGTTCTCCTACCCAACCGATGTCGGATCTCACAATCCATTCTCTTTCGGGGCCTAGCATCCTCGTTGTCACTCGTTTCCTTCTCTAATCGATGTGGGACCCTCCTAATCCACTCTCTTCAAGGCCCAGCATCCTTGCTAGCACTCATTCCCTTCTCTAATCGATGTGGGACCATCTCAATCCACCCTCCTCAGGGCCCAGCATCCTCGCTGGCACTCGTTCCCTTCTCTAATCAATGTGAGACTCTCTCAATCCACTCCCTACGGGACCTGGTGTCTTTGCTGGCACACCGCCTCGTGTCGACCCCCCTTTAGGATTCAGCCTCCTCGCTAGCACATAGCTCGGTATCTGTCTCTGATACCAACTGCAACAGTTCAAACCCATCGCTAGCAGATACTGTCCTCTTTGAACTTTTTATTTCAAGTTTTCCCTCAAAGTTTTTAAAACGTGTCTACTAACAGAGGTTTCCACACCCTTATAAACAATGTTTTATTCTCCTTCCTAACAGATGCAGGATCTCAAAAAAAAAAAAAAAAAAACGTCTTAGTGTTATGATGTTATATTCTTAAACAGGTCCAGCAGAAATCGGTGCTTTACCAGAAGACGACTAGCGAGAAGCCTGCGAAAACCGACCACCGAGCATCGGAGTACAGCTCAGGCAAACCCCAGCAGAAGCAAACGCATCAGCAGCAAAGTGATGTTATAAACATCAAAGGAGAGAACGTAGGCGCCGTCATGCACATCACTCAATCATCTGATGCCACAGAAACCCACAAGAAAAAGCCAACCGTAAGCTACAGCAGCGAAAACGAGAAAGATTCAAACAAATCAAGCTCCAACATGCCTGGAAAATCGTTCATGAACAGCAATTTTCAAGGTGTCAACAACTCCATTCTCTACAATTCGTCTTTGAGCCACCGTGATCCAGGCCTGCACCTTGCTTTCACCAAGAAGCCCACCCATGCCGATTCTGTTCATGATTCCAGGCACTGA

mRNA sequence

ATGGCAAATCTTCCTCGTTTTGGTCGAACATGGAACCGTTTCTCTTCCCTGCCCCGCCCTGGCACGGCCCCACGGCTTGATGTTCCGCCGCCGGCTGCCGCGTCGGAGCCGGAAGTTTATCCACCGCCTCCGCGCACTGCCAATGTTCTTCAAACTTCTCCTATTAAAGAAAGGTCTCCTCGAATCCCATCTCCGGTTAGGAAATATCCCTCGCCTCCTACTTCTCCCAAATATAGGGCGGCTGCCCCCAGCACTTCGCCCCGCAAGCCACTATCTCCTCCTCCGACGTATAACCGTTACGACGGAGAACGGCGGACCAGTGCTTTAGCTTCTCCTAAAACGTTCAAAACTACCTATACCTCTCCGCCACGATCACCGGCGAAACATAAATATTCCACCTCCACTCTCCAAGCACCACTCTCTCCTCTGGCTCTGCCTAGCTTGGAGAAGAGACATGAACCTGAGCCTATGGTTCGACCCAGGAGCCCACCGGAGAAATCGGTGCTTTACCAGAAGACGACTAGCGAGAAGCCTGCGAAAACCGACCACCGAGCATCGGAGTACAGCTCAGGCAAACCCCAGCAGAAGCAAACGCATCAGCAGCAAAGTGATGTTATAAACATCAAAGGAGAGAACGTAGGCGCCGTCATGCACATCACTCAATCATCTGATGCCACAGAAACCCACAAGAAAAAGCCAACCGTAAGCTACAGCAGCGAAAACGAGAAAGATTCAAACAAATCAAGCTCCAACATGCCTGGAAAATCGTTCATGAACAGCAATTTTCAAGGTGTCAACAACTCCATTCTCTACAATTCGTCTTTGAGCCACCGTGATCCAGGCCTGCACCTTGCTTTCACCAAGAAGCCCACCCATGCCGATTCTGTTCATGATTCCAGGCACTGA

Coding sequence (CDS)

ATGGCAAATCTTCCTCGTTTTGGTCGAACATGGAACCGTTTCTCTTCCCTGCCCCGCCCTGGCACGGCCCCACGGCTTGATGTTCCGCCGCCGGCTGCCGCGTCGGAGCCGGAAGTTTATCCACCGCCTCCGCGCACTGCCAATGTTCTTCAAACTTCTCCTATTAAAGAAAGGTCTCCTCGAATCCCATCTCCGGTTAGGAAATATCCCTCGCCTCCTACTTCTCCCAAATATAGGGCGGCTGCCCCCAGCACTTCGCCCCGCAAGCCACTATCTCCTCCTCCGACGTATAACCGTTACGACGGAGAACGGCGGACCAGTGCTTTAGCTTCTCCTAAAACGTTCAAAACTACCTATACCTCTCCGCCACGATCACCGGCGAAACATAAATATTCCACCTCCACTCTCCAAGCACCACTCTCTCCTCTGGCTCTGCCTAGCTTGGAGAAGAGACATGAACCTGAGCCTATGGTTCGACCCAGGAGCCCACCGGAGAAATCGGTGCTTTACCAGAAGACGACTAGCGAGAAGCCTGCGAAAACCGACCACCGAGCATCGGAGTACAGCTCAGGCAAACCCCAGCAGAAGCAAACGCATCAGCAGCAAAGTGATGTTATAAACATCAAAGGAGAGAACGTAGGCGCCGTCATGCACATCACTCAATCATCTGATGCCACAGAAACCCACAAGAAAAAGCCAACCGTAAGCTACAGCAGCGAAAACGAGAAAGATTCAAACAAATCAAGCTCCAACATGCCTGGAAAATCGTTCATGAACAGCAATTTTCAAGGTGTCAACAACTCCATTCTCTACAATTCGTCTTTGAGCCACCGTGATCCAGGCCTGCACCTTGCTTTCACCAAGAAGCCCACCCATGCCGATTCTGTTCATGATTCCAGGCACTGA

Protein sequence

MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAAASEPEVYPPPPRTANVLQTSPIKERSPRIPSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRYDGERRTSALASPKTFKTTYTSPPRSPAKHKYSTSTLQAPLSPLALPSLEKRHEPEPMVRPRSPPEKSVLYQKTTSEKPAKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVHDSRH
Homology
[Close]
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 4.0e-102
Identity = 216/309 (69.90%), Postives = 245/309 (79.29%), Query Frame = 1 

Query: 1   MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAAASEPEVYPPPPRTANVLQTSPIKERSP 60
           M+NLPRFGR WNRFSSLPRPGTA R +  P  AA+EPEV+P    T N  QTSPIK+R+P
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTP 60

Query: 61  RIPSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRYDGERRTSALASPKTFKTTYT 120
           R+ SPV+K+ SPP+SPKY  A  + SPRKPLSPPP +NRY+GERRTSA  SPKTFK T+ 
Sbjct: 61  RLSSPVKKFSSPPSSPKYSGAG-TVSPRKPLSPPPVHNRYEGERRTSATTSPKTFKPTHI 120

Query: 121 SPPRSPAKHKYST-STLQAPLSPLALPSLEKRHEPEPMVRPRSPPE---KSVLYQKTTSE 180
           SPP SP+K ++ST  T  APLSPLALP  + R EPE  +RPRSPPE   K +LYQ TT+E
Sbjct: 121 SPPPSPSKPRHSTVPTAVAPLSPLALPRSQVRREPEHSLRPRSPPEIEQKKILYQTTTTE 180

Query: 181 KPAKTDH--RASEYSSGKPQQKQTHQQ-QSDVINIKGENVGAVMHITQSSDATETHKKKP 240
           KP KTDH  +  EY + KPQQKQ HQQ QSDVINIKGENVGAVMHITQSSD +E  KKKP
Sbjct: 181 KPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGAVMHITQSSDGSEVIKKKP 240

Query: 241 TVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF-TKKPTH 300
           TV  S ENE+ +NKS+SN PGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF +KK  H
Sbjct: 241 TVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFGSKKSKH 300

Query: 301 ADSVHDSRH 302
            DS+HDSRH
Sbjct: 301 GDSIHDSRH 308

[Close]
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: A0A0A0L320_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.7e-23
Identity = 120/316 (37.97%), Postives = 160/316 (50.63%), Query Frame = 1 

Query: 1   MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAAASEPEVYPPPPRTANVLQTSPIKER-- 60
           MANLPR GRT  R SS+P          PP  AA++P V P         +T P      
Sbjct: 1   MANLPRLGRTRQRLSSVP----------PPVPAAAQPAVEPK-------YETMPYATSIT 60

Query: 61  SPRIPSPVRKYPSPPTSPKYRAAAP-------STSPRKPLSPPPTYNRYDGERRTSALAS 120
           +P   SP R+ P P +SP  +A +P       S + +   SPP +      ERR      
Sbjct: 61  TPAPASPRRESPRPLSSPSKKATSPFASRVDSSPAAKATRSPPDSIGDKYLERRNGE--- 120

Query: 121 PKTFKTTYTSPPRSPAKHKYSTSTLQAPLSPLALPSLEKRHEPEPMVRPRSPPE---KSV 180
                   T+PP +PAK + + ++   PLSPLALP  +         +PR  PE   K +
Sbjct: 121 --------TTPPLTPAKSRPAKTS---PLSPLALPRSQVITGNGTTAQPRVQPEVETKGI 180

Query: 181 LYQKTTSEKPAKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSDAT-- 240
           +Y K   EKP+K++ R SE+ SGK   ++  QQ+  V+ +KG NVGAVM + +SS     
Sbjct: 181 VYNKAADEKPSKSN-RQSEHGSGKSVHQK--QQKPGVMKLKGHNVGAVMEVNKSSAGYRL 240

Query: 241 --ETHKKKPTVS------YSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHR 295
             ET KKK T        Y  E++K   K     P  +FMNSNFQ VNNS+L++SS  HR
Sbjct: 241 GGETLKKKETEDDGDVDGYGHEDKKTGRKKKP--PISAFMNSNFQSVNNSLLFDSSCQHR 277

[Close]
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.4e-17
Identity = 85/228 (37.28%), Postives = 121/228 (53.07%), Query Frame = 1 

Query: 77  KYRAAAPSTSPRKPLSPPPTYNRYDGERRTSALASPKTFKTTYTSPPRSPAKHKYSTSTL 136
           +Y ++A  TS     SPP    R D +      ASP       TSPP SP+    +   +
Sbjct: 37  RYPSSARDTSLEPRSSPPRVALRRDDQPLP---ASPTYSIKKATSPPSSPSYRAPAARGI 96

Query: 137 QAPLSPLALPSLEKRHEPEPMVRPRSPP--EKSVLYQKTTSEKPAKTDHRASEYSSGKPQ 196
            +P       ++++  + +P  +PRSP   +K  ++ K+T EK  K+D     + S K  
Sbjct: 97  SSPTK-----TVDEYPKYKPNTQPRSPEAKQKPGIFHKSTVEKVTKSDRY---HESSKTL 156

Query: 197 QKQTHQQQSDVINIKGENVGAVMHITQSSDATETH---KKKPTVS--------YSSENEK 256
                Q Q + INIKGENVGAVM I +SS     H   K K T           + +N +
Sbjct: 157 SSHKGQLQPNAINIKGENVGAVMEIVESSKREGGHMIKKIKETARGILNNNDMANDQNNE 216

Query: 257 DSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPT 292
            S   +S+MP  +F+NSNFQ VNNS+LYN++L+HRDPGLHLAF++ PT
Sbjct: 217 ASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHRDPGLHLAFSRNPT 253

[Close]
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: A0A0A0L8G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.2e-15
Identity = 105/310 (33.87%), Postives = 145/310 (46.77%), Query Frame = 1 

Query: 1   MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAAASEPEVYPPPPRTANVLQTSPIKERSP 60
           MANLPR+GR W R S++ R        V  P    EPE+ P  P T   LQ  P +    
Sbjct: 1   MANLPRYGRRW-RLSTVSRLAPTATQSVQEP----EPEILPLAP-TIQTLQ--PFE---- 60

Query: 61  RIPSPVRKYPSPPTSPKYRAAAPSTSPRKP---LSPPPTYNRYDGERRTSALASPKTFKT 120
                    P+PP +    AA PS++P +P   +SPP    +Y+      A    K  ++
Sbjct: 61  ---------PTPPAA----AAPPSSTPGEPTPRISPPAASPKYEATVIREASPPLKPARS 120

Query: 121 TYTSPPRSPA--KHKYSTSTLQAPLSPLALPSLEKRHEPEPMVRPRSPPE-KSVLYQKTT 180
              SPPR     +H  S ++ Q PL P   PSL     P+       P   K  + QKT 
Sbjct: 121 PPVSPPRKSVDPRHSISPNSYQEPLKPTR-PSLSTLALPKSADVTTVPSAIKPEVEQKTD 180

Query: 181 SEKPAKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSDATE----THK 240
           S K  K+D +    S+  P   Q     +  IN+ G+N+GAVM I Q SD       T K
Sbjct: 181 SFK--KSDRQVDNVSAKPPPSLQ-----AKAINLTGDNIGAVMKINQFSDKISGGEVTRK 240

Query: 241 KKPTVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKP 300
            +       EN+ + ++  +  P     NSNFQ VNNS++YNSS S RDPGLHL F+ + 
Sbjct: 241 IETKTGVQQENDMEKSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLHLDFSGQK 277

[Close]
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match: G7L524_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_7g117980 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.8e-10
Identity = 117/363 (32.23%), Postives = 158/363 (43.53%), Query Frame = 1 

Query: 1   MANLPRFGRTWNRFSSL-------PRPGTAPRLDVPPPAAASEPEVYP----PPPRTANV 60
           MAN P   R W R +S+       P P   P L  PPPA A  PE  P    P  RTA+ 
Sbjct: 1   MANPPPV-RPWFRLTSIRPAPAPTPTPTPTPAL-APPPAPAPAPEPRPTMSLPTFRTASA 60

Query: 61  LQTSPIKERSPRIPSPVRKYPSPPTSPKYRAAAPSTS-PRKPLSPPPTYNRYDGERRTSA 120
              SP  +  P+     +   SPP    +  ++ S+S P  P+     Y+      +T+A
Sbjct: 61  -PPSPHNQTQPQEKKTEQTLSSPPHRGLFPNSSSSSSMPSSPIQKTTQYSSSSSPEKTTA 120

Query: 121 --------LASPKTFKTTYTSPPRSPAKHKYSTSTLQAPLSPLALPSLE-KRHEPEPMVR 180
                     SPKT K    SP  SP     +  +  +P SPL LP  + K  E      
Sbjct: 121 NTSRVPIPTQSPKTIKQNVRSPMHSP-----NARSTNSPPSPLTLPPSQFKTREEHSNKI 180

Query: 181 PRSPPEKSVLYQKTTS-EKPAKTD----HRASE-YSSGK-PQQKQTHQQQSD-------- 240
           P     K+VL QKT    KP   D    HR ++ +S+G+  +Q Q H   S         
Sbjct: 181 PVEAEPKAVLVQKTVDVPKPWHNDKGELHRENQNHSNGEFHRQTQNHSNSSHHGKHITVK 240

Query: 241 -------------------VINIKGENVGAVMHITQSSDATET---HKKKPTV------S 291
                              VI I GEN GA M + QS    +    HKK  T+      S
Sbjct: 241 GRESSKEKKFSDSEDSGMRVITIAGENRGAYMELVQSQKKHQPNYLHKKGNTIKVDGGES 300

[Close]
BLAST of Cp4.1LG08g00670 vs. TAIR10
Match: AT2G46630.1 (AT2G46630.1 unknown protein)

HSP 1 Score: 48.5 bits (114), Expect = 8.3e-06
Identity = 84/295 (28.47%), Postives = 120/295 (40.68%), Query Frame = 1 

Query: 20  PGTAPRLDVPPPAAASEPEVYPPPPRTANVLQTSPIKERSPRIPSPVRKYPSPPTSPKYR 79
           P T P+   PPP         PP P+        P K  SP  PSP     S  TS   +
Sbjct: 103 PPTPPKAATPPPPPPRSSYTSPPSPKEVQEA-LPPRKPNSP--PSPAHSSRST-TSESVK 162

Query: 80  AAAPSTSPRKPLSPPPTY--------NRYDGERRTSA---LASPKTFKTTYTSPPRSPAK 139
             +PS S     +P P          +    ER T+    L + KT +T  T+       
Sbjct: 163 TRSPSESENHRKAPSPRVLSPYSLPASLLHSERETTQKNILTAEKTSQTHETNHHNQNHN 222

Query: 140 HKYSTSTLQAPLSPLALPSLEKRHEPEPMVR-PRSPPEKSVLYQKTTS---EKPAKTDHR 199
           H Y+ +               + + P+ M R P S   ++++  +  +   E        
Sbjct: 223 HDYNQNHNYNQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEI 282

Query: 200 ASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYSSENEKD 259
                  K     TH   S V +  GE  G  +  + SS + E   KK T       +  
Sbjct: 283 LRSPQGNKTGGSGTHS--SRVSHGTGEK-GRRLQSSSSSSSDEGEGKKKTT------KNV 342

Query: 260 SNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVHDS 300
            NK +SN+P K+FMNSN Q +NNSI+YNS+ SH DPG+HL  ++KP   +  H S
Sbjct: 343 PNKGNSNLPMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKISRKPGSDNGFHVS 384

[Close]
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|659074888|ref|XP_008437849.1| (PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis melo])

HSP 1 Score: 384.8 bits (987), Expect = 1.4e-103
Identity = 216/309 (69.90%), Postives = 249/309 (80.58%), Query Frame = 1 

Query: 1   MANLPRFGRTWNRFSSLPRPGTAPRLDVPPP-AAASEPEVYPPPPRTANVLQTSPIKERS 60
           M+NLPRFGRTWNRFSSLPRP TA R +  P   AA+EPEV+P    T N LQTSP+K+R+
Sbjct: 1   MSNLPRFGRTWNRFSSLPRPSTAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRT 60

Query: 61  PRIPSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRYDGERRTSALASPKTFKTTY 120
           PR+ SPV+K+PSPP+SPKY  A  + SPRKPLSPP TYNR+DGERRTSA  SPKTFK TY
Sbjct: 61  PRLSSPVKKFPSPPSSPKYSGATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTY 120

Query: 121 TSPPRSPAKHKYSTS-TLQAPLSPLALPSLEKRHEPEPMVRPRSPPE---KSVLYQKTTS 180
            SPP SP K K+ST+ T+ APLSPLALP  E R EPE  +RPRSPPE   K +LYQ TT+
Sbjct: 121 ISPPPSPPKPKHSTAATVVAPLSPLALPRSEVRREPERSIRPRSPPEIEQKKILYQTTTT 180

Query: 181 EKPAKTDHRASE-YSSGKPQQKQTHQQ-QSDVINIKGENVGAVMHITQSSDATETHKKKP 240
           EKP KTD+R ++ Y + KPQQKQ HQQ QSDVINIKG+NVGAVMHITQSSD +E  KKKP
Sbjct: 181 EKPTKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKKP 240

Query: 241 TVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF-TKKPTH 300
           +V  S ENE+ +NKS+SN PGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLA+ +K P H
Sbjct: 241 SVGQSKENEEKTNKSNSNFPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAYSSKNPKH 300

Query: 301 ADSVHDSRH 302
            DS+H+SRH
Sbjct: 301 GDSIHESRH 309

[Close]
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|449432016|ref|XP_004133796.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 5.8e-102
Identity = 216/309 (69.90%), Postives = 245/309 (79.29%), Query Frame = 1 

Query: 1   MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAAASEPEVYPPPPRTANVLQTSPIKERSP 60
           M+NLPRFGR WNRFSSLPRPGTA R +  P  AA+EPEV+P    T N  QTSPIK+R+P
Sbjct: 1   MSNLPRFGRQWNRFSSLPRPGTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTP 60

Query: 61  RIPSPVRKYPSPPTSPKYRAAAPSTSPRKPLSPPPTYNRYDGERRTSALASPKTFKTTYT 120
           R+ SPV+K+ SPP+SPKY  A  + SPRKPLSPPP +NRY+GERRTSA  SPKTFK T+ 
Sbjct: 61  RLSSPVKKFSSPPSSPKYSGAG-TVSPRKPLSPPPVHNRYEGERRTSATTSPKTFKPTHI 120

Query: 121 SPPRSPAKHKYST-STLQAPLSPLALPSLEKRHEPEPMVRPRSPPE---KSVLYQKTTSE 180
           SPP SP+K ++ST  T  APLSPLALP  + R EPE  +RPRSPPE   K +LYQ TT+E
Sbjct: 121 SPPPSPSKPRHSTVPTAVAPLSPLALPRSQVRREPEHSLRPRSPPEIEQKKILYQTTTTE 180

Query: 181 KPAKTDH--RASEYSSGKPQQKQTHQQ-QSDVINIKGENVGAVMHITQSSDATETHKKKP 240
           KP KTDH  +  EY + KPQQKQ HQQ QSDVINIKGENVGAVMHITQSSD +E  KKKP
Sbjct: 181 KPTKTDHYRQNDEYGASKPQQKQQHQQLQSDVINIKGENVGAVMHITQSSDGSEVIKKKP 240

Query: 241 TVSYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF-TKKPTH 300
           TV  S ENE+ +NKS+SN PGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAF +KK  H
Sbjct: 241 TVGQSKENEEKTNKSNSNYPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFGSKKSKH 300

Query: 301 ADSVHDSRH 302
            DS+HDSRH
Sbjct: 301 GDSIHDSRH 308

[Close]
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|659074890|ref|XP_008437851.1| (PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo])

HSP 1 Score: 119.8 bits (299), Expect = 8.3e-24
Identity = 121/309 (39.16%), Postives = 158/309 (51.13%), Query Frame = 1 

Query: 1   MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAAASEPEVYPPP---PRTANVLQTSPIKE 60
           MANLPRFGR   R  ++P          PP  AA++P V P     P    +   +P   
Sbjct: 1   MANLPRFGRARQRLPAVP----------PPVPAAAQPAVEPRYQILPFATTITTPAPASP 60

Query: 61  R--SPR-IPSPVRKYPSPPTSPKYRAAAP----STSPRKPLSPPPTYNRYDGERRTSALA 120
           R  SPR + SP +K  SP  SPKY  +      S + +  +SPP +      ERR     
Sbjct: 61  RRESPRPLSSPPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGE-- 120

Query: 121 SPKTFKTTYTSPPRSPAKHKYSTSTLQAPLSPLALPSLEKRHEPEPMVRPRSPPE---KS 180
                    T+PP SPAK + + +    PLSPLALP  +         +PR  PE   K 
Sbjct: 121 ---------TTPPLSPAKSRRAKTP---PLSPLALPRNQVFTGNGTTAQPRVQPEVETKG 180

Query: 181 VLYQKTTSEKPAKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSD--- 240
           ++Y KT  EKP+K++  + EY S K  QK+   Q+ +VI +KG NVGAVM I +SS    
Sbjct: 181 IVYNKTV-EKPSKSNRSSGEYGSSKSHQKK---QKPEVIKLKGHNVGAVMEINKSSTGYR 240

Query: 241 -ATETHKKKPTV------SYSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSH 287
              ET KK  T        Y  E++K   K     P  +FMNSNFQ VNNS+L++SS +H
Sbjct: 241 LGGETLKKNETEDVGDVHGYGHEDKKTETK-KKEPPITAFMNSNFQSVNNSLLFDSSCNH 280

[Close]
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|449432018|ref|XP_004133797.1| (PREDICTED: atherin-like [Cucumis sativus])

HSP 1 Score: 117.1 bits (292), Expect = 5.4e-23
Identity = 120/316 (37.97%), Postives = 160/316 (50.63%), Query Frame = 1 

Query: 1   MANLPRFGRTWNRFSSLPRPGTAPRLDVPPPAAASEPEVYPPPPRTANVLQTSPIKER-- 60
           MANLPR GRT  R SS+P          PP  AA++P V P         +T P      
Sbjct: 1   MANLPRLGRTRQRLSSVP----------PPVPAAAQPAVEPK-------YETMPYATSIT 60

Query: 61  SPRIPSPVRKYPSPPTSPKYRAAAP-------STSPRKPLSPPPTYNRYDGERRTSALAS 120
           +P   SP R+ P P +SP  +A +P       S + +   SPP +      ERR      
Sbjct: 61  TPAPASPRRESPRPLSSPSKKATSPFASRVDSSPAAKATRSPPDSIGDKYLERRNGE--- 120

Query: 121 PKTFKTTYTSPPRSPAKHKYSTSTLQAPLSPLALPSLEKRHEPEPMVRPRSPPE---KSV 180
                   T+PP +PAK + + ++   PLSPLALP  +         +PR  PE   K +
Sbjct: 121 --------TTPPLTPAKSRPAKTS---PLSPLALPRSQVITGNGTTAQPRVQPEVETKGI 180

Query: 181 LYQKTTSEKPAKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSDAT-- 240
           +Y K   EKP+K++ R SE+ SGK   ++  QQ+  V+ +KG NVGAVM + +SS     
Sbjct: 181 VYNKAADEKPSKSN-RQSEHGSGKSVHQK--QQKPGVMKLKGHNVGAVMEVNKSSAGYRL 240

Query: 241 --ETHKKKPTVS------YSSENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHR 295
             ET KKK T        Y  E++K   K     P  +FMNSNFQ VNNS+L++SS  HR
Sbjct: 241 GGETLKKKETEDDGDVDGYGHEDKKTGRKKKP--PISAFMNSNFQSVNNSLLFDSSCQHR 277

[Close]
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match: gi|449432014|ref|XP_004133795.1| (PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 3.4e-17
Identity = 85/228 (37.28%), Postives = 121/228 (53.07%), Query Frame = 1 

Query: 77  KYRAAAPSTSPRKPLSPPPTYNRYDGERRTSALASPKTFKTTYTSPPRSPAKHKYSTSTL 136
           +Y ++A  TS     SPP    R D +      ASP       TSPP SP+    +   +
Sbjct: 37  RYPSSARDTSLEPRSSPPRVALRRDDQPLP---ASPTYSIKKATSPPSSPSYRAPAARGI 96

Query: 137 QAPLSPLALPSLEKRHEPEPMVRPRSPP--EKSVLYQKTTSEKPAKTDHRASEYSSGKPQ 196
            +P       ++++  + +P  +PRSP   +K  ++ K+T EK  K+D     + S K  
Sbjct: 97  SSPTK-----TVDEYPKYKPNTQPRSPEAKQKPGIFHKSTVEKVTKSDRY---HESSKTL 156

Query: 197 QKQTHQQQSDVINIKGENVGAVMHITQSSDATETH---KKKPTVS--------YSSENEK 256
                Q Q + INIKGENVGAVM I +SS     H   K K T           + +N +
Sbjct: 157 SSHKGQLQPNAINIKGENVGAVMEIVESSKREGGHMIKKIKETARGILNNNDMANDQNNE 216

Query: 257 DSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPT 292
            S   +S+MP  +F+NSNFQ VNNS+LYN++L+HRDPGLHLAF++ PT
Sbjct: 217 ASKAPNSSMPTNTFLNSNFQSVNNSLLYNANLTHRDPGLHLAFSRNPT 253

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g00670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g00670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5T3_CUCSA4.0e-10269.90Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119290 PE=4 SV=1[more]
A0A0A0L320_CUCSA3.7e-2337.97Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119300 PE=4 SV=1[more]
A0A0A0L3R5_CUCSA2.4e-1737.28Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119280 PE=4 SV=1[more]
A0A0A0L8G8_CUCSA2.2e-1533.87Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119310 PE=4 SV=1[more]
G7L524_MEDTR2.8e-1032.23Uncharacterized protein OS=Medicago truncatula GN=MTR_7g117980 PE=4 SV=1[more]
BLAST of Cp4.1LG08g00670 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46630.18.3e-0628.47 unknown protein[more]
BLAST of Cp4.1LG08g00670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074888|ref|XP_008437849.1|1.4e-10369.90PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis me... [more]
gi|449432016|ref|XP_004133796.1|5.8e-10269.90PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus][more]
gi|659074890|ref|XP_008437851.1|8.3e-2439.16PREDICTED: serine/arginine repetitive matrix protein 1-like [Cucumis melo][more]
gi|449432018|ref|XP_004133797.1|5.4e-2337.97PREDICTED: atherin-like [Cucumis sativus][more]
gi|449432014|ref|XP_004133795.1|3.4e-1737.28PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g00670.1Cp4.1LG08g00670.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33472FAMILY NOT NAMEDcoord: 1..290
score: 6.5
NoneNo IPR availablePANTHERPTHR33472:SF1EXTENSIN-RELATEDcoord: 1..290
score: 6.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g00670CmaCh06G009840Cucurbita maxima (Rimu)cmacpeB848
Cp4.1LG08g00670CmoCh14G021910Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g00670CmoCh06G010180Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g00670CsGy3G007800Cucumber (Gy14) v2cgybcpeB454
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g00670Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g00670Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g00670Cucurbita maxima (Rimu)cmacpeB014
Cp4.1LG08g00670Cucurbita maxima (Rimu)cmacpeB015
Cp4.1LG08g00670Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g00670Wild cucumber (PI 183967)cpecpiB864
Cp4.1LG08g00670Cucumber (Chinese Long) v2cpecuB862
Cp4.1LG08g00670Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g00670Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g00670Watermelon (97103) v1cpewmB845
Cp4.1LG08g00670Melon (DHL92) v3.5.1cpemeB815
Cp4.1LG08g00670Melon (DHL92) v3.6.1cpemedB929
Cp4.1LG08g00670Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g00670Silver-seed gourdcarcpeB0180
Cp4.1LG08g00670Silver-seed gourdcarcpeB1380
Cp4.1LG08g00670Cucumber (Chinese Long) v3cpecucB1058
Cp4.1LG08g00670Cucumber (Chinese Long) v3cpecucB1071
Cp4.1LG08g00670Wax gourdcpewgoB1098
Cp4.1LG08g00670Wax gourdcpewgoB1105