Cp4.1LG07g07020 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g07020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG07 : 5931515 .. 5937293 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGTAAAATTTAAATTATTTTTACCATTTTTATATTTACTGGAGTGAAAAAAGTATCCAATTTAAAAAAGGAATGGAAATAAATATCTTAAATAAAAAGGAATTTTAAAAAATAAATAATAAAAGAAAAAGAAAAAGAATCCCTTAATTTAAGGGTGAGAGTGGTGAATAAAATCAAATGGTGAAATATTTGAATCAGAAACGGACGTACAAAATGAATTCCTCTGTTCTCTCTCCCCTTTTCTCTACTGCACCTCTCCTTCTCACGCGCTCATCAATGGCGGTGCTTAAGATCCTCTTCTTCTTTTTCCGTTATGCTTAGCCTTCCGCCTCTGCCTCTCGCCGGAATCCGTCTCCTCCGCCTCCTTCTTTGATTTTTCTTTTGCCGTGATCGGACAATGGAGTTCAGGTTCCGTGCCGGCGATCATCGACCACCGCCACCGACTCCGGCGCTGCAGTATGCTTCTCCTTGCCCGCCGCCGGCTGTTTACTGCTTATCTAAGCAAGGATTTTCAGGTTTGTGTTTAAATCTGTATGGACTCTGTGAAATCAAGCGGAGTTGAAGGAACTGGAGAGGCTCTGGCTTTAATATTTCTTCTGGTTTTGGATGTTTCGGATAGTGAATAGTTTTGTTTCGAATAGAGTAATTTTTTTTTTTTTATTGCATTGGAACTGTGGCCTGTATTTAGCTTTTGCGATGAGTAATTTGATTACGATCTGAAATTTGGAAGGAATTCAAATTTTAGGGAAAGGAGTTCTACTTTCATTTTTTTTGTGACTAATTTTACTCTTTTCGATTACGGAAGAGGAATCGTGAGAATTTAGTTCTGCACGATTTCCCCTTAACCGAATGGATTATCTCATAAGTTCTTTTTTATTTTGGTTGTCTAACCTTTGTACTGTAGATCAAGCATTTGAGAGAGGAATCTCGGACTTCTCTTCGTTTTCTTCACTCTTTCTGTTTTTATTGATTTTTTATTTTCGATTTCTTGATGGATTCAACAGACGCCTGTCTCAGAGGAAGCACGAATATTGTCGCAGACAGAAAGCCGTTCGATACCGACGAAGCGATGCATTGCGAGATGGAGTTGATGCGATTGAGAAAAGAGAAATTACTGGTGGAGATTGAACGACAGCAGTTTCTGAAAGAGGACGCGAGGAGAGAACTAGTGTTGTTCGAACGAGAGATGGCGATTCGAGGCTATATTTTCCACAGACACAACCGATGGGGAGGGCCGTTCAGCGCACCGGCAGCGCCATTGTCATTGCCGTCTTCAGCAACAGTGGTGCAGTCGTCCAATGAATGGCCGAAGGTCGAGCAACTGGAAAGTTCTGATCGCCTTGGGTTTGGTGCAGTGCCGTCACCGCCGCGGGTTCGGCCATTAATGGTGGATGACAAGACGGAGCGTCAGGTACTGCAGGATGATGAAAGAGAACTCATTATACTGGTTTGACTCTCTCTCTCTCTCTCTCTCTATATATATATATAATATTATATCAGTCTGTTACCTTCTTTTTTTCTCTATCAACGGTGATTCCATGTTTTAGGGTTTTTCTTGATTTTAACTTTTTAAAAAATGTTTTTGAAGAATTAAAATCACTTTTTTATGACCATCTTTTCGTTAGAATTATTAATTTAGGGACTATTTGATAATATTTCTATTTTCTTGTTACATTTATTTTAAATTTATATGTAAAAAAACTTATATAAAAACCATAGGAAGAAAGTCCCGCATCCCATAATTTAGGGAATGATATCGAGAAATACTTTCTCCATTGATATAAGCATCCCACATCCCATAATTTAGGGAATGATCATGGGTTTATAATGGAGGAATACTCTCTCCATTGATGTAAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGTCTATGCTCAAAGTGGACAATATCGTATCATTGTCGAGAGTCATGTTCATCTAACATGGTATTAGAGCCACGCCCTAAACGTAGTCATGTCAATAGAATCCTCAAATGTCGAACATAGAACTCCAAAAGAAAAAGTGGTCGAGGCTCCTCGAAGGCATAGTAAAAAATGACGAAGACTCCAAAAGAAAAAGGGGTCAAGCCTCGATTAAGAGGAGGCGTACTTTGTTCGAGGGGAGGTGTTGGATGAAAGTCTCACGTTGGCTAATTTAGGGAATGATCATGGGTTTATAAGCAAGGAATACTCTCCATTGATATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAATTGACAATATCATACTATTGTGGAGAGTCGTGTTCATCTAACATGATATCAAAGCCATGCCTAAACTTAGTCATGTCAGTAGAATCCTCAAATGTCGAACAAAGGACTCCAAAAGAAAAAGGAGTCGAGGCTCCACGAAGGCATAGTATAAAATGACGAAGACTCCAAAAGAAAAAGGAGTCAAGCCTCGGGAAGTGTTGGATGAAAGTTCCACATTGACTAATTTAGGTAATGATCATGGGTTTATAATCAAGGAATACTCTCTCCATTTGTACGAGGGCCTTTTAGGGAAGCCTAAAGCAAACCCAAGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTCCATCTAATATATGGTACATTTTACTAATAAAAAATGATAAATGATATTTTTTAATGTGATTTTAATTTGAGTAAGTGATTTTTTGAAAATTCTATGATGTTTGGTGATTAAAAGAAGTATCTTTATAGGGTTACTTTGAAGTTGTTTTTGGATCTTCTTTAGAAAGAAAATGAAAACTCTTAACTGATATACCCTACACTGTTCGTTTGTTAATAAAGAAGTTTGAATAATTTAAAATCACTTGAAACCTTTGGTATGTGTTTACGTCGACGTTTATTGATCATATAAATCAATAATTGACGTGTGATATTTGATTACCAACTTCTAAATATGCTTATATGATATTTGATTACAATCATTTAAAATAATTATGAACTTTTCTTCAATTTTAGAATTGAAAAAAACATATTTTCTTTTTCATTCTCAAATATTATAGTAGGAGTGATGGTCAGTTTTTAATTCTCAAAACAAGGAGTAAGTTGTCATGAATAATTGCATCTCCTATTGTGTCGTTTATTTGGCTCATAACTCTCGTTTATTTAGTTCATAACTCTCGTTTATTTGGCTCATAACTCTCATTTATTTGGCTCATAACTCTGGTTTGTTTGGCTCATAACTCTGGTTTGTTTGGCTCATAACTCTGGTTTGTTTGGCTCATAACTCTGGTTTGTTTGGCTCATAACTCTCGTTTATTTGGTTTGGTTCATAGCTCTTATTTACTTGGTTCATAATCCTTTTGGTTCATATGATACATGAATCAACTTGATTGTATGACATTAATGCTTCTATGCCTATATAAAGGGGTCTCTACGATAGTTGAGATGTATTGAGTTTGAGTGTTCTTTTGTATTTGTTGAGTGACATTTGGGAGGAACTTTGTTGAGACACTTTGTAGTGTGAGAGTGTGAGGTATACACTTTGTAAATGCTTAGATTATTGAGATTGGTTACTATCCATGGATGTAGAGGAATTTTTTATCTCCGAATCAGGTAAATCTTTGTGTCTCTTTGTTTAATTTTTATTTGTGGGTGTGTGAGTGCGATCGATCTAGCTTCCGTTTTTGTCAACGATTGGTATTAGAGCATTTTGGTTGAGGCATTTAGGGTATTCTAATGAAGTCGTCCACGAGATGTGCTCACACTCACTATCAATTATTGAAGACAAATTTCTCATTATAAGCTTCTCATCAATCGAACCACGCTTGTAATGAGAAACTTGTCTTCGATAATTGATGGTGAGTGTGAGCACGTCTCGTGGTCAATGAAGTTAAATCTTTTAGAAAACCCCGGTTAAATCTTTTAGAAACCCCCAGTTAAATCTTTTAGAAACCCCCAGTTAAATCTTTTAGAAAACCCCAAATACCACAACTAAAATGCTCTAATATCAATTGTTGACGGAAACGGAAGATACATTGATCGCACTCGTACACCCACAAAAAGATGCAAAGATTTACGTGGTTCGGAGATAAGAAATTCCCCTACATCCATGGGTAGCAACCAATCTCAATAATCTAAGTGTTTACAATGTGTAAACCTCACTCTCACGCTACAAAGTCTCTCAATAAAATTTCTCCCAAATGTCACTCAACAAATACAAAATGACACTCAAACTCAATACATCTCAATCATCCTACACAACCCTTTATATAGGCATAGAAGCATTAATGTTGTACATGATGATTCATGTGTCAAAATGAAAGATGAACTAAATAAAGGAAAGTTATGAACCAAATAAATAAAAATACTTGCATACGAAATTCATGAACCTATGAAGATTTGTGACAACTTGCAACAATCTCTACCGAAGATCTCCATACAAATAATCAATTTGGCGGCCACCAAATCAACAAACTACTTCGGTTCTACAATTCTTCCAATAGTGGCATTATTTATAGATGAAAATATATTACGCAAAAAGATATTTGTGGGTGAACTGGCTTCCTTGAAATCGAGTGGTTTTACAATCTGATCTTTGATTTCTTCATTTAGGTGAAATTACGGCACTCCAGAGTTTGATGATGGGGTTTATACATACAAAAAAATAAGCTATTTGTATGCAGTGTGCGAGTGTGTTGAAAGCTGCCTTTCTAATTGCTTCATTTCATGATATTGTAAACGTCATGTTTAGAGGAGTTCATTCCTTATGAATTTGTGAATACTTTGCAGGAAAAACCCGACCCGAATGTATTTAGAGAAAAGAGGAAAGCCGAGACGCCATCGACTTTCACCGACGACGTCCAACCATTCAGTGTGAAGCAAAATCCCAAGGATGAGTGGATTTGTGTACTGTGTCAAGTTACCGTGTTGAGCCAAAGTACTTTTGATCAACACCTTCATGGCAAGAAGCACAAACGCAAAGAAGCAGGTCTGAGGGCTCAAAAGGCGAGCAACGTTGCGCCCGAGCCATTACCGAACAAAAGGAGGAAGCTAGTTGAAGTCGAGGCGACGTCTGGGTCGACATGTGCAGAAGTAAAGGAGTCAAAAGATGGAGAAACTCTTCAATGTGAGAAAACAGGAAGTAGTTCTGATTTGAAATTAGACGAAAACTTTATAACTGAGGATGTTGTTGTGGGGAAAAAGAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTTTTGCTACAGAGGTGATGGTAGATCATCTGAATGGGAAGAAGCACAAGGCAAGTCTTCGATAAGAAGAAAGTTGAGAGTGCAGCAGCTGTAGATACGAGTCGAGTCGAGTCGAGTGGACGGTCTACGACGACAGGTGTTGCCCCATGGTTCGGCAGATGAAAAAGGTCAGTGAGGTGTTTCTCATGTTCTTTAAAGTGTGTCAATAAATAGATAAAGAGCTAGAAAATCTAACCAGATCTGGGTAGGAAGTAGAATTTAGATGAACTTTTAGAATTGTGAAGCTAATTGGAAGTACTATTACAATTGACTTTGTTTATGATTCTAGCTCGTTGTTATGGTCACGGTGGTGATTACTGAAAATTATTTTCATGGCAAGGGTGGGAGCGACGAGTAGGGTAAAGAAGTGGATAGAGAAGTTGGTCATGGGACAACTTCGAGTTTTATGATTTTCTTATTTATTTAAGATGCATTGAATTAATTTTAGTTGTTTGAAATTTGTTAGGCACCCTTAGTTATGGGAACAATGAAATTCAGACCGTT

mRNA sequence

AGGGTAAAATTTAAATTATTTTTACCATTTTTATATTTACTGGAGTGAAAAAAGTATCCAATTTAAAAAAGGAATGGAAATAAATATCTTAAATAAAAAGGAATTTTAAAAAATAAATAATAAAAGAAAAAGAAAAAGAATCCCTTAATTTAAGGGTGAGAGTGGTGAATAAAATCAAATGGTGAAATATTTGAATCAGAAACGGACGTACAAAATGAATTCCTCTGTTCTCTCTCCCCTTTTCTCTACTGCACCTCTCCTTCTCACGCGCTCATCAATGGCGGTGCTTAAGATCCTCTTCTTCTTTTTCCGTTATGCTTAGCCTTCCGCCTCTGCCTCTCGCCGGAATCCGTCTCCTCCGCCTCCTTCTTTGATTTTTCTTTTGCCGTGATCGGACAATGGAGTTCAGGTTCCGTGCCGGCGATCATCGACCACCGCCACCGACTCCGGCGCTGCAGTATGCTTCTCCTTGCCCGCCGCCGGCTGTTTACTGCTTATCTAAGCAAGGATTTTCAGACGCCTGTCTCAGAGGAAGCACGAATATTGTCGCAGACAGAAAGCCGTTCGATACCGACGAAGCGATGCATTGCGAGATGGAGTTGATGCGATTGAGAAAAGAGAAATTACTGGTGGAGATTGAACGACAGCAGTTTCTGAAAGAGGACGCGAGGAGAGAACTAGTGTTGTTCGAACGAGAGATGGCGATTCGAGGCTATATTTTCCACAGACACAACCGATGGGGAGGGCCGTTCAGCGCACCGGCAGCGCCATTGTCATTGCCGTCTTCAGCAACAGTGGTGCAGTCGTCCAATGAATGGCCGAAGGTCGAGCAACTGGAAAGTTCTGATCGCCTTGGGTTTGGTGCAGAAAAACCCGACCCGAATGTATTTAGAGAAAAGAGGAAAGCCGAGACGCCATCGACTTTCACCGACGACGTCCAACCATTCAGTGTGAAGCAAAATCCCAAGGATGAGTGGATTTGTGTACTGTGTCAAGTTACCGTGTTGAGCCAAAGTACTTTTGATCAACACCTTCATGGCAAGAAGCACAAACGCAAAGAAGCAGGTCTGAGGGCTCAAAAGGCGAGCAACGTTGCGCCCGAGCCATTACCGAACAAAAGGAGGAAGCTAGTTGAAGTCGAGGCGACGTCTGGGTCGACATGTGCAGAAGTAAAGGAGTCAAAAGATGGAGAAACTCTTCAATGTGAGAAAACAGGAAGTAGTTCTGATTTGAAATTAGACGAAAACTTTATAACTGAGGATGTTGTTGTGGGGAAAAAGAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTTTTGCTACAGAGGTGATGGTAGATCATCTGAATGGGAAGAAGCACAAGGCAAGTCTTCGATAAGAAGAAAGTTGAGAGTGCAGCAGCTGTAGATACGAGTCGAGTCGAGTCGAGTGGACGGTCTACGACGACAGGTGTTGCCCCATGGTTCGGCAGATGAAAAAGGTCAGTGAGGTGTTTCTCATGTTCTTTAAAGTGTGTCAATAAATAGATAAAGAGCTAGAAAATCTAACCAGATCTGGGTAGGAAGTAGAATTTAGATGAACTTTTAGAATTGTGAAGCTAATTGGAAGTACTATTACAATTGACTTTGTTTATGATTCTAGCTCGTTGTTATGGTCACGGTGGTGATTACTGAAAATTATTTTCATGGCAAGGGTGGGAGCGACGAGTAGGGTAAAGAAGTGGATAGAGAAGTTGGTCATGGGACAACTTCGAGTTTTATGATTTTCTTATTTATTTAAGATGCATTGAATTAATTTTAGTTGTTTGAAATTTGTTAGGCACCCTTAGTTATGGGAACAATGAAATTCAGACCGTT

Coding sequence (CDS)

ATGGAGTTCAGGTTCCGTGCCGGCGATCATCGACCACCGCCACCGACTCCGGCGCTGCAGTATGCTTCTCCTTGCCCGCCGCCGGCTGTTTACTGCTTATCTAAGCAAGGATTTTCAGACGCCTGTCTCAGAGGAAGCACGAATATTGTCGCAGACAGAAAGCCGTTCGATACCGACGAAGCGATGCATTGCGAGATGGAGTTGATGCGATTGAGAAAAGAGAAATTACTGGTGGAGATTGAACGACAGCAGTTTCTGAAAGAGGACGCGAGGAGAGAACTAGTGTTGTTCGAACGAGAGATGGCGATTCGAGGCTATATTTTCCACAGACACAACCGATGGGGAGGGCCGTTCAGCGCACCGGCAGCGCCATTGTCATTGCCGTCTTCAGCAACAGTGGTGCAGTCGTCCAATGAATGGCCGAAGGTCGAGCAACTGGAAAGTTCTGATCGCCTTGGGTTTGGTGCAGAAAAACCCGACCCGAATGTATTTAGAGAAAAGAGGAAAGCCGAGACGCCATCGACTTTCACCGACGACGTCCAACCATTCAGTGTGAAGCAAAATCCCAAGGATGAGTGGATTTGTGTACTGTGTCAAGTTACCGTGTTGAGCCAAAGTACTTTTGATCAACACCTTCATGGCAAGAAGCACAAACGCAAAGAAGCAGGTCTGAGGGCTCAAAAGGCGAGCAACGTTGCGCCCGAGCCATTACCGAACAAAAGGAGGAAGCTAGTTGAAGTCGAGGCGACGTCTGGGTCGACATGTGCAGAAGTAAAGGAGTCAAAAGATGGAGAAACTCTTCAATGTGAGAAAACAGGAAGTAGTTCTGATTTGAAATTAGACGAAAACTTTATAACTGAGGATGTTGTTGTGGGGAAAAAGAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTTTTGCTACAGAGGTGATGGTAGATCATCTGAATGGGAAGAAGCACAAGGCAAGTCTTCGATAA

Protein sequence

MEFRFRAGDHRPPPPTPALQYASPCPPPAVYCLSKQGFSDACLRGSTNIVADRKPFDTDEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYIFHRHNRWGGPFSAPAAPLSLPSSATVVQSSNEWPKVEQLESSDRLGFGAEKPDPNVFREKRKAETPSTFTDDVQPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQKASNVAPEPLPNKRRKLVEVEATSGSTCAEVKESKDGETLQCEKTGSSSDLKLDENFITEDVVVGKKKFKFWCEKCKVGAFATEVMVDHLNGKKHKASLR

Homology

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BLAST of Cp4.1LG07g07020 vs. TrEMBL
Match: A0A0A0LJ38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035540 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.9e-77
Identity = 189/408 (46.32%), Postives = 234/408 (57.35%), Query Frame = 1


Query: 1   MEFRFRAGDHR---PPPPTPALQYASPCPPP---------AVYCLSKQGFSDACL----- 60
           MEF+FR  D R   PPPP P + +  P PPP         AVYCLS+QGF D  +     
Sbjct: 1   MEFKFRVDDLRKPPPPPPPPQMHFLPPMPPPMHFLPPASPAVYCLSEQGFPDFFMDSADA 60

Query: 61  -RGSTNIVADRKPFDTDEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMA 120
            R +TNI   R+PF+ +E MH EME MRLR+EKL+ EIER++FLKE+ARREL LFERE+A
Sbjct: 61  FRQTTNIGTLRQPFNLNEEMHLEMEFMRLREEKLIGEIERERFLKEEARRELRLFEREIA 120

Query: 121 IR-------GYIFHRHNRW---------GGPFSAPAAPLSLPSSATVVQSSNEWPKVEQL 180
           IR       GY F +  RW         G P SA A P   PS A VVQS +EW  +EQ+
Sbjct: 121 IRGLTQSAVGYPFQQPQRWVAPPFCPVTGPPSSAVAVPCPSPSQALVVQSYHEWQNMEQV 180

Query: 181 ESSDRLGFGA---------------------------EKPDPNVFREKRKAE-TPSTFTD 240
           ++SDRLGFGA                           EKP PN FRE+RKAE T S    
Sbjct: 181 KTSDRLGFGAVALRPRIQPLMVEDKKEAANERKLIVLEKPVPNAFREERKAETTTSPSIK 240

Query: 241 DVQPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQ---KASNVAPE 300
            + P  VK+  KDEW C LCQVT   + +F+ HL GKKH+RKEA LRA+   K S VA E
Sbjct: 241 HILPSLVKKTSKDEWSCALCQVTTAEEKSFNDHLRGKKHRRKEANLRAEKESKVSRVAHE 300

Query: 301 PLPNKRRKLVEVEATSGSTCAEVKESKDGETLQCEKTGSSSDL--------------KLD 328
           PL  KRRKL +  A +    AE KE+KDGE    EK+  S D+              + +
Sbjct: 301 PLSKKRRKLQKAMAAAAGGGAEGKETKDGEADVGEKSEGSVDMNALIPYFLKKENKQQQE 360

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BLAST of Cp4.1LG07g07020 vs. TrEMBL
Match: B9STT6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0623850 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.6e-27
Identity = 119/386 (30.83%), Postives = 173/386 (44.82%), Query Frame = 1


Query: 1   MEFRFRAGDHRPPPPTPALQYASPCPPPAVYCLSKQGFSDACLRGSTNIVADRKPFDT-- 60
           MEFRFRA D RPP       +  P      Y      FS+   R + +++   +  D   
Sbjct: 1   MEFRFRAADSRPPE-----YFFHPSSSGTAY------FSEHAFRANYHVIDSTQDSDLMR 60

Query: 61  DEAMHCEMELMRLRKEKLLVEIE-RQQFLKEDARRELVLFEREM---------------- 120
           +E +H EME  R+R++ ++ E+  R++ L+ + RRE+++ ERE+                
Sbjct: 61  NEMLHREMEKDRIREQIIMEEMTMRRRILEAEVRREMMI-EREIAMRAVGGYNDDSYEET 120

Query: 121 ---AIRGYIFHRHNRWGGPF--SAPAAPLSLPSSATVVQSSNEW--PKVEQL-ESSDRLG 180
               I    FH  N+         PA P       +  + S  W  P V    E+S    
Sbjct: 121 LEPTILAPQFHFMNQLNNRRVEDRPAFPGRGFLDHSPRRLSEAWAGPDVNAAKENSKGKV 180

Query: 181 FGAEKPDPNVFREKRKAETPSTFTDDVQPFSV-KQNPKDEWICVLCQVTVLSQSTFDQHL 240
               KPDPN+F  KRKA TP        P +V K+ PK+EW C LC+V+  S+   + HL
Sbjct: 181 VVLAKPDPNLFGVKRKAATPPVGGTHELPCTVLKKKPKEEWSCALCRVSATSEQGLNNHL 240

Query: 241 HGKKHKRKEAGLRAQK-ASNVAPEPLPNKRRKLVEVEATSGSTCAEVKESKDGETLQCEK 300
            GKKHK KEA LRA K A      PLP K   L + + T  +   E++   + E++Q +K
Sbjct: 241 RGKKHKAKEARLRANKMAKTPCSRPLPKK--SLRQTKLTVSTADLELEPEAEAESVQVDK 300

Query: 301 TGSSSDLKLD---------------------------ENFITEDVVVG---KKKFKFWCE 328
               +D K+                            +  + E+       KKKFKFWCE
Sbjct: 301 NDDDTDKKMGNKVAENNNDKLQVQKNGSVKSKKKNVVKKVLKEERTAEFRMKKKFKFWCE 360

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BLAST of Cp4.1LG07g07020 vs. TrEMBL
Match: A0A067L3P2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04047 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 6.1e-27
Identity = 132/388 (34.02%), Postives = 184/388 (47.42%), Query Frame = 1


Query: 1   MEFRFRAGDHRPPPPTPALQYASPCPPPAVYCLSKQGFSDACLRGSTNIVADRKPFDTDE 60
           MEF+FRA D RP        Y S       +  S+Q F  A     TNI+        +E
Sbjct: 1   MEFKFRAVDGRP-----RFTYESSSTTAGYF--SEQEFRAAY----TNIL--NPELMRNE 60

Query: 61  AMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYI------------- 120
            +  E++  R+R+E +  EI R++ L+ + RREL++ EREMA+R  I             
Sbjct: 61  MLQREIKKERIREEIITGEIVRRRMLEAEVRRELMM-EREMAMRAGIEGGLSFEERLTMG 120

Query: 121 -------------FHRHNRWGGPFSAPAAP---LSLPSSATVVQSSNEWPKVEQLESSDR 180
                        ++R      PF A       L  P  +  + + +  P  E  +S  R
Sbjct: 121 IRPRVSCSLNDQFYNRRLEMRPPFPARGVFDQWLQPPRLSEALVAPDVKPASEYNQS--R 180

Query: 181 LGFGAEKPDPNVFREKRKAET-PSTFTDDVQPFSVKQNPKDEWICVLCQVTVLSQSTFDQ 240
           L   A KPDPN+ R KRKA T P+    ++    +K+ PK+EW C LCQV+  S++  ++
Sbjct: 181 LIVLA-KPDPNLCRAKRKAATIPAGDAGELCLAGLKKKPKEEWSCALCQVSATSENGLNE 240

Query: 241 HLHGKKHKRKEAGLRAQK-ASNVAPEPLPNKRRKLVEVEATSGSTCAE----VKES---- 300
           HL GKKHK KEA LRA K A N++   LP K  K  E+  T G +C E    V+ES    
Sbjct: 241 HLRGKKHKAKEARLRATKMAKNLSALQLPKKTAKPAEL--TIGVSCTELEAKVEESLQVI 300

Query: 301 -----------------KDGETLQCEKTGSSS-----DLKLDENFITEDVVVGKKKFKFW 328
                            K+ + L+ +  G++S       KL     TE+    KKKFKFW
Sbjct: 301 KSNYTEKKIGNEKDSGKKNEKQLKQKNKGATSVKKDVAAKLQREKRTEEFRK-KKKFKFW 360

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BLAST of Cp4.1LG07g07020 vs. TrEMBL
Match: A0A059CKW4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00251 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.1e-23
Identity = 110/357 (30.81%), Postives = 157/357 (43.98%), Query Frame = 1


Query: 1   MEFRFRAGDH--RPPPPTPALQYASPCPPPAVYCLSKQGFSDACLRGSTNIVADRKPFDT 60
           MEF++RAG    RP P  P    A      A + +   G  +     + +  A R P+  
Sbjct: 1   MEFKYRAGASASRPQPVVPRPSRAGFFSDEA-WRVDYPGTRNLRPHLNCDFNAMRDPYLV 60

Query: 61  DEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVL--------------FEREMAIR 120
            E +  E+E  ++R+E +  E+ R+Q L+E+ RREL+L              FE +  + 
Sbjct: 61  RETIQREIEKQKIREEIIASEVARRQMLEEEVRRELMLERQMVLRRAGDGLPFEGKSTMW 120

Query: 121 -GY-----IFHR--------HNRWGGPFSAPAAPLSLPSSATVVQSSNEWPKVEQLESSD 180
            G+       HR        H  + G  +   +PL     AT  +   E  K       D
Sbjct: 121 FGFNPGHPALHRLESRAMEDHLAFFGHNAVDMSPLIRSPEATPTEIKPELNK-------D 180

Query: 181 RLGFGAEKPDPNVFREKRKAETPSTFTDDVQPFSVKQNPKDEWICVLCQVTVLSQSTFDQ 240
           RL     +PDPN+   KRKA T S   D++  FS K+  K+EW C LCQV+  S+    +
Sbjct: 181 RL-IMLPRPDPNLSSAKRKASTSSVDADELSTFSQKKKTKEEWTCALCQVSATSEKGLKE 240

Query: 241 HLHGKKHKRKEAGLRAQKASNVAPEPLPNKRRKLVEVEATSGSTCAEVKESKDGETLQCE 300
           HL GKKHK KEA L                 RK+ +   T      E+K+SK        
Sbjct: 241 HLEGKKHKTKEASLA----------------RKIGKEGTTESRVNQELKDSK-------- 300

Query: 301 KTGSSSDLKLDENFITEDVVVGKKKFKFWCEKCKVGAFATEVMVDHLNGKKHKASLR 328
                S  K+ +N    +    KK F+FWC  C++GAF+  VM  H  GKKH A L+
Sbjct: 301 ---MLSRPKMVQNLENTEGS-RKKNFQFWCAMCQIGAFSVTVMESHQKGKKHIARLQ 320

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BLAST of Cp4.1LG07g07020 vs. TrEMBL
Match: F6HYK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00400 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.3e-23
Identity = 79/208 (37.98%), Postives = 102/208 (49.04%), Query Frame = 1


Query: 155 GAEKPDPNVFREKRKAETPSTF-TDDVQPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLH 214
           G  KP  N+   KRKA TP T   +++     K+  K+EW C LCQVT  S+   ++HL 
Sbjct: 27  GHPKPGQNLSGAKRKATTPPTVGVNELSSVGSKKKLKEEWSCALCQVTATSERGLNEHLQ 86

Query: 215 GKKHKRKEAGLRAQKASNVAPEPLPNKRRKLVEVEATSGSTCAEVKESKDGETLQCEKTG 274
           GKKHK KEAGL AQ+A    P PL  K RK  ++   + +      E   GETLQ +  G
Sbjct: 87  GKKHKAKEAGLVAQRAGK-NPAPLQKKFRKASKLAEITDAPGTGQVEKIVGETLQTDIVG 146

Query: 275 SSS-----------------DLKLDENFITEDVV-----------------VGKKKFKFW 328
            +S                 +L L +N + ED+                  + KKKFKFW
Sbjct: 147 EASTSILKKHNAEDGDKKNDELLLQKNEVGEDMTKNVEATKPKGQKPVDPKLKKKKFKFW 206

[Close]

BLAST of Cp4.1LG07g07020 vs. TAIR10
Match: AT5G61190.1 (AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 43/146 (29.45%), Postives = 65/146 (44.52%), Query Frame = 1


Query: 192 EWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQKASNVAPEPLPNKRRKLVEVEATS 251
           E++C++C V   SQ  F+ HL GKKH    A + +Q  + +    L   + K V  +   
Sbjct: 367 EFVCLMCNVVCQSQIVFNSHLRGKKH----ANMLSQSEALIVSTKL---QEKGVGEKEQP 426

Query: 252 GSTCAEVKESKDGETLQCEKTGSSSDLKLDENFITE--DVVVGKKK---------FKFWC 311
             T AE++       LQ +K      + +D   + E  D V G+ K          K+ C
Sbjct: 427 SETVAELQ-------LQSQK-AQEKQVLVDSKKLPEKGDEVKGQPKEMTALRNASAKYIC 486

Query: 312 EKCKVGAFATEVMVDHLNGKKHKASL 327
             C VG  +  V   HL G+KH A+L
Sbjct: 487 RMCNVGCHSPIVFETHLRGQKHAANL 497

[Close]

BLAST of Cp4.1LG07g07020 vs. NCBI nr
Match: gi|449454103|ref|XP_004144795.1| (PREDICTED: uncharacterized protein LOC101215299 isoform X2 [Cucumis sativus])

HSP 1 Score: 297.0 bits (759), Expect = 4.1e-77
Identity = 189/406 (46.55%), Postives = 234/406 (57.64%), Query Frame = 1


Query: 1   MEFRFRAGDHR---PPPPTPALQYASPCPPP---------AVYCLSKQGFSDACL----- 60
           MEF+FR  D R   PPPP P + +  P PPP         AVYCLS+QGF D  +     
Sbjct: 1   MEFKFRVDDLRKPPPPPPPPQMHFLPPMPPPMHFLPPASPAVYCLSEQGFPDFFMDSADA 60

Query: 61  -RGSTNIVADRKPFDTDEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMA 120
            R +TNI   R+PF+ +E MH EME MRLR+EKL+ EIER++FLKE+ARREL LFERE+A
Sbjct: 61  FRQTTNIGTLRQPFNLNEEMHLEMEFMRLREEKLIGEIERERFLKEEARRELRLFEREIA 120

Query: 121 IR-------GYIFHRHNRW---------GGPFSAPAAPLSLPSSATVVQSSNEWPKVEQL 180
           IR       GY F +  RW         G P SA A P   PS A VVQS +EW  +EQ+
Sbjct: 121 IRGLTQSAVGYPFQQPQRWVAPPFCPVTGPPSSAVAVPCPSPSQALVVQSYHEWQNMEQV 180

Query: 181 ESSDRLGFGA-------------------------EKPDPNVFREKRKAE-TPSTFTDDV 240
           ++SDRLGFGA                         EKP PN FRE+RKAE T S     +
Sbjct: 181 KTSDRLGFGAVALRPRIQPLMVEDKKEAANERKLIEKPVPNAFREERKAETTTSPSIKHI 240

Query: 241 QPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQ---KASNVAPEPL 300
            P  VK+  KDEW C LCQVT   + +F+ HL GKKH+RKEA LRA+   K S VA EPL
Sbjct: 241 LPSLVKKTSKDEWSCALCQVTTAEEKSFNDHLRGKKHRRKEANLRAEKESKVSRVAHEPL 300

Query: 301 PNKRRKLVEVEATSGSTCAEVKESKDGETLQCEKTGSSSDL--------------KLDEN 328
             KRRKL +  A +    AE KE+KDGE    EK+  S D+              + + N
Sbjct: 301 SKKRRKLQKAMAAAAGGGAEGKETKDGEADVGEKSEGSVDMNALIPYFLKKENKQQQENN 360

[Close]

BLAST of Cp4.1LG07g07020 vs. NCBI nr
Match: gi|778667249|ref|XP_011648895.1| (PREDICTED: uncharacterized protein LOC101215299 isoform X1 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 7.0e-77
Identity = 189/408 (46.32%), Postives = 234/408 (57.35%), Query Frame = 1


Query: 1   MEFRFRAGDHR---PPPPTPALQYASPCPPP---------AVYCLSKQGFSDACL----- 60
           MEF+FR  D R   PPPP P + +  P PPP         AVYCLS+QGF D  +     
Sbjct: 1   MEFKFRVDDLRKPPPPPPPPQMHFLPPMPPPMHFLPPASPAVYCLSEQGFPDFFMDSADA 60

Query: 61  -RGSTNIVADRKPFDTDEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMA 120
            R +TNI   R+PF+ +E MH EME MRLR+EKL+ EIER++FLKE+ARREL LFERE+A
Sbjct: 61  FRQTTNIGTLRQPFNLNEEMHLEMEFMRLREEKLIGEIERERFLKEEARRELRLFEREIA 120

Query: 121 IR-------GYIFHRHNRW---------GGPFSAPAAPLSLPSSATVVQSSNEWPKVEQL 180
           IR       GY F +  RW         G P SA A P   PS A VVQS +EW  +EQ+
Sbjct: 121 IRGLTQSAVGYPFQQPQRWVAPPFCPVTGPPSSAVAVPCPSPSQALVVQSYHEWQNMEQV 180

Query: 181 ESSDRLGFGA---------------------------EKPDPNVFREKRKAE-TPSTFTD 240
           ++SDRLGFGA                           EKP PN FRE+RKAE T S    
Sbjct: 181 KTSDRLGFGAVALRPRIQPLMVEDKKEAANERKLIVLEKPVPNAFREERKAETTTSPSIK 240

Query: 241 DVQPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQ---KASNVAPE 300
            + P  VK+  KDEW C LCQVT   + +F+ HL GKKH+RKEA LRA+   K S VA E
Sbjct: 241 HILPSLVKKTSKDEWSCALCQVTTAEEKSFNDHLRGKKHRRKEANLRAEKESKVSRVAHE 300

Query: 301 PLPNKRRKLVEVEATSGSTCAEVKESKDGETLQCEKTGSSSDL--------------KLD 328
           PL  KRRKL +  A +    AE KE+KDGE    EK+  S D+              + +
Sbjct: 301 PLSKKRRKLQKAMAAAAGGGAEGKETKDGEADVGEKSEGSVDMNALIPYFLKKENKQQQE 360

[Close]

BLAST of Cp4.1LG07g07020 vs. NCBI nr
Match: gi|659069985|ref|XP_008452753.1| (PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X3 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 8.9e-64
Identity = 177/405 (43.70%), Postives = 221/405 (54.57%), Query Frame = 1


Query: 1   MEFRFRAGDHRPPPPTPA-------------LQYASPCPPPAVYCLSKQGFSDACLRGST 60
           MEF FRAGDHRPPPP P              +Q+  P PPPA YCLS+QGFS++  R +T
Sbjct: 1   MEFNFRAGDHRPPPPPPPPPAMQLLPPRPPPMQFLPPGPPPA-YCLSEQGFSES-FRQTT 60

Query: 61  NIVADRKPFDTDEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRG-- 120
           NIV  R+PF  +E  H EMELMRLR+EKL+ EIER++FLKE+ARREL LFERE+AIRG  
Sbjct: 61  NIVTLRQPFVPNEERHWEMELMRLREEKLMGEIERERFLKEEARRELRLFEREIAIRGLT 120

Query: 121 -----YIFHRHNRW-GGPFSAPAAPLSLPSSATVVQS----------------------- 180
                Y F +  +W G P SA AAP   P  A  V +                       
Sbjct: 121 PSAVGYPFQQPQQWVGPPSSAVAAPCPSPLPAVPVHAYHEWHRMEQVKTSGRLGFGAVSL 180

Query: 181 ----------SNEWPKVEQLESSDRLGFGAEKPDPNVFREKRKAETPSTFTDDVQPFSVK 240
                       + PKV +  +S+R     EKP  N  REKRKAET S  T  ++   VK
Sbjct: 181 RPRIQPLMVEDKKEPKVTKEAASERELIVLEKPVRNALREKRKAETTSPSTKVIKLSLVK 240

Query: 241 QNPKDEWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQKASNV---APEPLPNKRRK 300
           +  + EW C LC+V+  ++  F++HL GKKH RKEA LRA+K S V   A EPLP KRRK
Sbjct: 241 KTSQAEWSCALCKVSTANEIGFNEHLRGKKHMRKEASLRARKESKVSQAAAEPLPKKRRK 300

Query: 301 LVEVEATSGSTCAEVKE---SKDGETLQCEKTGSSSDLKL-----------DEN------ 328
             +  A +    AE KE   +KDGET   EKT  S D+             +EN      
Sbjct: 301 PWQAMAAAAGGGAEGKEKETTKDGETHVGEKTEGSVDMNALIPYFPKVGDKEENKQENNS 360

[Close]

BLAST of Cp4.1LG07g07020 vs. NCBI nr
Match: gi|659069981|ref|XP_008452738.1| (PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63
Identity = 178/411 (43.31%), Postives = 221/411 (53.77%), Query Frame = 1


Query: 1   MEFRFRAGDHRPPPPTPA-------------LQYASPCPPPAVYCLSKQGFSDACL---- 60
           MEF FRAGDHRPPPP P              +Q+  P PPPA YCLS+QGFSD  +    
Sbjct: 1   MEFNFRAGDHRPPPPPPPPPAMQLLPPRPPPMQFLPPGPPPA-YCLSEQGFSDFFMDSTE 60

Query: 61  --RGSTNIVADRKPFDTDEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREM 120
             R +TNIV  R+PF  +E  H EMELMRLR+EKL+ EIER++FLKE+ARREL LFERE+
Sbjct: 61  SFRQTTNIVTLRQPFVPNEERHWEMELMRLREEKLMGEIERERFLKEEARRELRLFEREI 120

Query: 121 AIRG-------YIFHRHNRW-GGPFSAPAAPLSLPSSATVVQS----------------- 180
           AIRG       Y F +  +W G P SA AAP   P  A  V +                 
Sbjct: 121 AIRGLTPSAVGYPFQQPQQWVGPPSSAVAAPCPSPLPAVPVHAYHEWHRMEQVKTSGRLG 180

Query: 181 ----------------SNEWPKVEQLESSDRLGFGAEKPDPNVFREKRKAETPSTFTDDV 240
                             + PKV +  +S+R     EKP  N  REKRKAET S  T  +
Sbjct: 181 FGAVSLRPRIQPLMVEDKKEPKVTKEAASERELIVLEKPVRNALREKRKAETTSPSTKVI 240

Query: 241 QPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQKASNV---APEPL 300
           +   VK+  + EW C LC+V+  ++  F++HL GKKH RKEA LRA+K S V   A EPL
Sbjct: 241 KLSLVKKTSQAEWSCALCKVSTANEIGFNEHLRGKKHMRKEASLRARKESKVSQAAAEPL 300

Query: 301 PNKRRKLVEVEATSGSTCAEVKE---SKDGETLQCEKTGSSSDLKL-----------DEN 328
           P KRRK  +  A +    AE KE   +KDGET   EKT  S D+             +EN
Sbjct: 301 PKKRRKPWQAMAAAAGGGAEGKEKETTKDGETHVGEKTEGSVDMNALIPYFPKVGDKEEN 360

[Close]

BLAST of Cp4.1LG07g07020 vs. NCBI nr
Match: gi|659069983|ref|XP_008452745.1| (PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 3.7e-62
Identity = 178/411 (43.31%), Postives = 221/411 (53.77%), Query Frame = 1


Query: 1   MEFRFRAGDHRPPPPTPA-------------LQYASPCPPPAVYCLSKQGFSDACL---- 60
           MEF FRAGDHRPPPP P              +Q+  P PPPA YCLS+QGFSD  +    
Sbjct: 1   MEFNFRAGDHRPPPPPPPPPAMQLLPPRPPPMQFLPPGPPPA-YCLSEQGFSDFFMDSTE 60

Query: 61  --RGSTNIVADRKPFDTDEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREM 120
             R +TNIV  R+PF  +E  H EMELMRLR+EKL+ EIER++FLKE+ARREL LFERE+
Sbjct: 61  SFRQTTNIVTLRQPFVPNEERHWEMELMRLREEKLMGEIERERFLKEEARRELRLFEREI 120

Query: 121 AIRG-------YIFHRHNRW-GGPFSAPAAPLSLPSSATVVQS----------------- 180
           AIRG       Y F +  +W G P SA AAP   P  A  V +                 
Sbjct: 121 AIRGLTPSAVGYPFQQPQQWVGPPSSAVAAPCPSPLPAVPVHAYHEWHRMEQVKTSGRLG 180

Query: 181 ----------------SNEWPKVEQLESSDRLGFGAEKPDPNVFREKRKAETPSTFTDDV 240
                             + PKV +  +S+R     EKP  N  REKRKAET S  T  +
Sbjct: 181 FGAVSLRPRIQPLMVEDKKEPKVTKEAASERELI--EKPVRNALREKRKAETTSPSTKVI 240

Query: 241 QPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQKASNV---APEPL 300
           +   VK+  + EW C LC+V+  ++  F++HL GKKH RKEA LRA+K S V   A EPL
Sbjct: 241 KLSLVKKTSQAEWSCALCKVSTANEIGFNEHLRGKKHMRKEASLRARKESKVSQAAAEPL 300

Query: 301 PNKRRKLVEVEATSGSTCAEVKE---SKDGETLQCEKTGSSSDLKL-----------DEN 328
           P KRRK  +  A +    AE KE   +KDGET   EKT  S D+             +EN
Sbjct: 301 PKKRRKPWQAMAAAAGGGAEGKEKETTKDGETHVGEKTEGSVDMNALIPYFPKVGDKEEN 360

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g07020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g07020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ38_CUCSA	4.9e-77	46.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035540 PE=4 SV=1	[more]
B9STT6_RICCO	4.6e-27	30.83	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0623850 PE=4 SV=1	[more]
A0A067L3P2_JATCU	6.1e-27	34.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04047 PE=4 SV=1	[more]
A0A059CKW4_EUCGR	4.1e-23	30.81	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00251 PE=4 SV=1	[more]
F6HYK2_VITVI	5.3e-23	37.98	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00400 PE=4 SV=...	[more]

BLAST of Cp4.1LG07g07020 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61190.1	1.4e-06	29.45	putative endonuclease or glycosyl hydrolase with C2H2-type zinc fing...	[more]

BLAST of Cp4.1LG07g07020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454103\|ref\|XP_004144795.1\|	4.1e-77	46.55	PREDICTED: uncharacterized protein LOC101215299 isoform X2 [Cucumis sativus]	[more]
gi\|778667249\|ref\|XP_011648895.1\|	7.0e-77	46.32	PREDICTED: uncharacterized protein LOC101215299 isoform X1 [Cucumis sativus]	[more]
gi\|659069985\|ref\|XP_008452753.1\|	8.9e-64	43.70	PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X3 [Cuc...	[more]
gi\|659069981\|ref\|XP_008452738.1\|	2.6e-63	43.31	PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X1 [Cuc...	[more]
gi\|659069983\|ref\|XP_008452745.1\|	3.7e-62	43.31	PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X2 [Cuc...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR003604	Matrin/U1-like-C_Znf_C2H2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g07020.1	Cp4.1LG07g07020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Zinc finger, U1-type	SMART	SM00451	ZnF_U1_5	coord: 295..327 score: 6.2coord: 190..224 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 73..100 scor
None	No IPR available	PANTHER	PTHR23067	DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN	coord: 244..327 score: 3.1E-25coord: 157..223 score: 3.1
None	No IPR available	PANTHER	PTHR23067:SF43	SUBFAMILY NOT NAMED	coord: 157..223 score: 3.1E-25coord: 244..327 score: 3.1
None	No IPR available	PFAM	PF12874	zf-met	coord: 193..217 score: 1.
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 183..226 score: 3.09

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g07020	Cucsa.090130	Cucumber (Gy14) v1	cgycpeB0178
Cp4.1LG07g07020	CmaCh12G008540	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g07020	CmaCh05G010320	Cucurbita maxima (Rimu)	cmacpeB795
Cp4.1LG07g07020	CmoCh12G008580	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g07020	CmoCh05G010440	Cucurbita moschata (Rifu)	cmocpeB748
Cp4.1LG07g07020	Cla020018	Watermelon (97103) v1	cpewmB807
Cp4.1LG07g07020	Csa2G035540	Cucumber (Chinese Long) v2	cpecuB823
Cp4.1LG07g07020	MELO3C004128	Melon (DHL92) v3.5.1	cpemeB773
Cp4.1LG07g07020	MELO3C010212	Melon (DHL92) v3.5.1	cpemeB752
Cp4.1LG07g07020	ClCG02G014420	Watermelon (Charleston Gray)	cpewcgB734
Cp4.1LG07g07020	CSPI02G05230	Wild cucumber (PI 183967)	cpecpiB824
Cp4.1LG07g07020	Lsi11G006890	Bottle gourd (USVL1VR-Ls)	cpelsiB661
Cp4.1LG07g07020	MELO3C004128.2	Melon (DHL92) v3.6.1	cpemedB909
Cp4.1LG07g07020	CsaV3_2G007580	Cucumber (Chinese Long) v3	cpecucB1017
Cp4.1LG07g07020	Bhi06G001225	Wax gourd	cpewgoB1007
Cp4.1LG07g07020	CsGy2G005370	Cucumber (Gy14) v2	cgybcpeB274
Cp4.1LG07g07020	Carg16432	Silver-seed gourd	carcpeB1263
Cp4.1LG07g07020	Carg11968	Silver-seed gourd	carcpeB0806

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g07020	Cp4.1LG11g08330	Cucurbita pepo (Zucchini)	cpecpeB143

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g07020	Cucurbita pepo (Zucchini)	cpecpeB499
Cp4.1LG07g07020	Cucurbita maxima (Rimu)	cmacpeB163