MELO3C010212 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTTCAGGTTCCGAGCTATAGATAACAAATCGCCGGCCACCGCCGCTTCCACCTCCGATCAACCGATTCAAGGTAACTTAAGCTTAATCCAAATGTTAATCTCTGTTTTACCTTCAGATCACATAAACATTCCTCCAGGCTAGGCTCCATTTCGATTATTCAACCAGTTGCTTATAAAGCTTTTTAATCTAATCACTTCAGATGATTCTCTAAACGAGGAGCTCTGGAAACAACGGATCAAAGAAGAGATAACGATGCGAGAAATAGTGAGACGAAGAATGTTGGAGGCAGAGATAAGGAGAGAGCTCCTTGTGGAACGAGAACTGGCTATTCGAAGAGCTAGGGGCCAGACGGAAGGCTTATTATCGTTTGACAATCAGTTTCTCGTGAGATTTATGAATGAAGGAGTGAATCGCATTCTGGATCCGTCATCGTCTACAGCTTTACTGGCGGTTCCAGGTTCCAATTCCTCGCTTAACTTAAAGGAAGAACCGAAGCCTGAAGAGGATGAAATGAACAAGCTAATCACTCTGGTAAGTTAAGAACCAATACTTTTCCTTATGATTATTTTTCTCCTTCATTTTACCTTTTTTGTTAGTGAATTTTTAGCTCTCCAAGAAAAACAAATAGATTTCTAGCTAACATTTTTTATTTTATTTCTCCTTTTTGGTGGTTAAAACTTTTAAAATATTTATTTTATTTACATACTAAAACTATGAACATATTCGAAAATTGTCCAGGGTTTTTTTGGATATTTTATGTGTTATGTAACTACATATGGAATATGGAATGAAGAATGATGTGATTGACCTTATGTTGTTCATGTATGGAATGGAGTCGTATAAACTTGTTTAAGTCTAAAGATAGTTATATAACAAAATATAAAACGACTTGAAAAATTTCCCATAAAAAAGAATATTTTTTGTATTTGAACATAAATATATTTTCATAGGCTCAAACTAAACTTATTTCACACTAAAATGATGTGATTGACCTTATGTTGTTCATGTCTGCACTTGAAAAAGCGTGTTTATGTATTTATACGGTTTATGCCATAAACTGGAAGAAAATTCAACTTCAAGTCTCTCTACATAGTAAGCTATTGAACTAGCAACATCAAATAAGTATAAACTTAAATTTCTGTCTTTCAAGTTTATATCTAGCTAGTAAATTCGTTTGACTTTTTAATTTATGTCTAATAGATTTCTGATTTTTTTTTATAGAAAGAAAATTAAAGTTATATTTAATAGCATCCTGAATAGCACTCAAGATAGATGCCACCTAATGCACAAATTAAATCTGTTTAGAATCTATTAAACACAAAATCAAAAACTCTAGAAATTCGTTAGATGATACTTGTCAAAATTTGGGGACGACGTATTTGAAAGTTCACATGTGGAATGTGGAAACTGCAGGAGAGGCCAGACCCGGGAAAATTTGTAGGGAAGAGGAAAGCAGTGGGAGATCAAGAAGCAGCGGCAGCAATGGGAGGAGGGGGTGAAAGAGATCAACGTCAAACAATAATTCCAACTCCTTGGATCGGTTCAAAGAAATTAGCAAAAGAAGAGTTTGTTTGTAGTATGTGCAATGTTAAGGCCACAAGTGAAATTAGCTTCAATGCACACATAAATGGCAAGAAACACAAGGCCAAAGAGGGCCGTCGCCAAGTACAACAAACAACTCATAAGGAACCCAACCAAGGGGAAGAAGATCTCAAAGAAAAATTAGACCACCCAGTGAAGAACATAGATAAAAATCCAGCCCTTGAGAAGAACAAGAGACTTAAATTCCGGTGTGAAATTTGCAACGTCGGAGTCCCTTGGATGGCTGTTATGGTCTCACATAACAATGGAAGAAAGCATAAGGCTCGCCTTTTGAAACTTTCTCAACAATGCAAATCGGAGGACCAAAAGGACTAG ATGAATTTCAGGTTCCGAGCTATAGATAACAAATCGCCGGCCACCGCCGCTTCCACCTCCGATCAACCGATTCAAGATGATTCTCTAAACGAGGAGCTCTGGAAACAACGGATCAAAGAAGAGATAACGATGCGAGAAATAGTGAGACGAAGAATGTTGGAGGCAGAGATAAGGAGAGAGCTCCTTGTGGAACGAGAACTGGCTATTCGAAGAGCTAGGGGCCAGACGGAAGGCTTATTATCGTTTGACAATCAGTTTCTCGTGAGATTTATGAATGAAGGAGTGAATCGCATTCTGGATCCGTCATCGTCTACAGCTTTACTGGCGGTTCCAGGTTCCAATTCCTCGCTTAACTTAAAGGAAGAACCGAAGCCTGAAGAGGATGAAATGAACAAGCTAATCACTCTGGAGAGGCCAGACCCGGGAAAATTTGTAGGGAAGAGGAAAGCAGTGGGAGATCAAGAAGCAGCGGCAGCAATGGGAGGAGGGGGTGAAAGAGATCAACGTCAAACAATAATTCCAACTCCTTGGATCGGTTCAAAGAAATTAGCAAAAGAAGAGTTTGTTTGTAGTATGTGCAATGTTAAGGCCACAAGTGAAATTAGCTTCAATGCACACATAAATGGCAAGAAACACAAGGCCAAAGAGGGCCGTCGCCAAGTACAACAAACAACTCATAAGGAACCCAACCAAGGGGAAGAAGATCTCAAAGAAAAATTAGACCACCCAGTGAAGAACATAGATAAAAATCCAGCCCTTGAGAAGAACAAGAGACTTAAATTCCGGTGTGAAATTTGCAACGTCGGAGTCCCTTGGATGGCTGTTATGGTCTCACATAACAATGGAAGAAAGCATAAGGCTCGCCTTTTGAAACTTTCTCAACAATGCAAATCGGAGGACCAAAAGGACTAG ATGAATTTCAGGTTCCGAGCTATAGATAACAAATCGCCGGCCACCGCCGCTTCCACCTCCGATCAACCGATTCAAGATGATTCTCTAAACGAGGAGCTCTGGAAACAACGGATCAAAGAAGAGATAACGATGCGAGAAATAGTGAGACGAAGAATGTTGGAGGCAGAGATAAGGAGAGAGCTCCTTGTGGAACGAGAACTGGCTATTCGAAGAGCTAGGGGCCAGACGGAAGGCTTATTATCGTTTGACAATCAGTTTCTCGTGAGATTTATGAATGAAGGAGTGAATCGCATTCTGGATCCGTCATCGTCTACAGCTTTACTGGCGGTTCCAGGTTCCAATTCCTCGCTTAACTTAAAGGAAGAACCGAAGCCTGAAGAGGATGAAATGAACAAGCTAATCACTCTGGAGAGGCCAGACCCGGGAAAATTTGTAGGGAAGAGGAAAGCAGTGGGAGATCAAGAAGCAGCGGCAGCAATGGGAGGAGGGGGTGAAAGAGATCAACGTCAAACAATAATTCCAACTCCTTGGATCGGTTCAAAGAAATTAGCAAAAGAAGAGTTTGTTTGTAGTATGTGCAATGTTAAGGCCACAAGTGAAATTAGCTTCAATGCACACATAAATGGCAAGAAACACAAGGCCAAAGAGGGCCGTCGCCAAGTACAACAAACAACTCATAAGGAACCCAACCAAGGGGAAGAAGATCTCAAAGAAAAATTAGACCACCCAGTGAAGAACATAGATAAAAATCCAGCCCTTGAGAAGAACAAGAGACTTAAATTCCGGTGTGAAATTTGCAACGTCGGAGTCCCTTGGATGGCTGTTATGGTCTCACATAACAATGGAAGAAAGCATAAGGCTCGCCTTTTGAAACTTTCTCAACAATGCAAATCGGAGGACCAAAAGGACTAG MNFRFRAIDNKSPATAASTSDQPIQDDSLNEELWKQRIKEEITMREIVRRRMLEAEIRRELLVERELAIRRARGQTEGLLSFDNQFLVRFMNEGVNRILDPSSSTALLAVPGSNSSLNLKEEPKPEEDEMNKLITLERPDPGKFVGKRKAVGDQEAAAAMGGGGERDQRQTIIPTPWIGSKKLAKEEFVCSMCNVKATSEISFNAHINGKKHKAKEGRRQVQQTTHKEPNQGEEDLKEKLDHPVKNIDKNPALEKNKRLKFRCEICNVGVPWMAVMVSHNNGRKHKARLLKLSQQCKSEDQKD*
BLAST of MELO3C010212 vs. Swiss-Prot
Match: UBA1C_ARATH (UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2) HSP 1 Score: 62.8 bits (151), Expect = 7.6e-09 Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 1
BLAST of MELO3C010212 vs. TrEMBL
Match: A0A059CKW4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00251 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 9.6e-27 Identity = 105/285 (36.84%), Postives = 145/285 (50.88%), Query Frame = 1
BLAST of MELO3C010212 vs. TrEMBL
Match: A0A067L3P2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04047 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22 Identity = 90/253 (35.57%), Postives = 124/253 (49.01%), Query Frame = 1
BLAST of MELO3C010212 vs. TrEMBL
Match: A0A067L3P2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04047 PE=4 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.5e-03 Identity = 29/92 (31.52%), Postives = 46/92 (50.00%), Query Frame = 1
HSP 2 Score: 107.1 bits (266), Expect = 3.9e-20 Identity = 97/344 (28.20%), Postives = 145/344 (42.15%), Query Frame = 1
BLAST of MELO3C010212 vs. TrEMBL
Match: B9STT6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0623850 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 5.1e-20 Identity = 92/297 (30.98%), Postives = 136/297 (45.79%), Query Frame = 1
BLAST of MELO3C010212 vs. TrEMBL
Match: B9STT6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0623850 PE=4 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 1.8e-01 Identity = 24/83 (28.92%), Postives = 39/83 (46.99%), Query Frame = 1
HSP 2 Score: 40.8 bits (94), Expect = 3.4e+00 Identity = 31/127 (24.41%), Postives = 52/127 (40.94%), Query Frame = 1
HSP 3 Score: 100.9 bits (250), Expect = 2.8e-18 Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 1
BLAST of MELO3C010212 vs. TAIR10
Match: AT2G24030.1 (AT2G24030.1 zinc ion binding;nucleic acid binding) HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13 Identity = 90/344 (26.16%), Postives = 134/344 (38.95%), Query Frame = 1
BLAST of MELO3C010212 vs. TAIR10
Match: AT5G61190.1 (AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10 Identity = 47/154 (30.52%), Postives = 62/154 (40.26%), Query Frame = 1
HSP 2 Score: 37.4 bits (85), Expect = 1.9e-02 Identity = 23/80 (28.75%), Postives = 37/80 (46.25%), Query Frame = 1
BLAST of MELO3C010212 vs. TAIR10
Match: AT2G19380.1 (AT2G19380.1 RNA recognition motif (RRM)-containing protein) HSP 1 Score: 62.8 bits (151), Expect = 4.3e-10 Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 1
BLAST of MELO3C010212 vs. TAIR10
Match: AT2G19385.1 (AT2G19385.1 zinc ion binding) HSP 1 Score: 52.0 bits (123), Expect = 7.6e-07 Identity = 46/171 (26.90%), Postives = 76/171 (44.44%), Query Frame = 1
BLAST of MELO3C010212 vs. NCBI nr
Match: gi|659086276|ref|XP_008443847.1| (PREDICTED: uncharacterized protein LOC103487343 [Cucumis melo]) HSP 1 Score: 607.4 bits (1565), Expect = 1.3e-170 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1
BLAST of MELO3C010212 vs. NCBI nr
Match: gi|702289768|ref|XP_010047067.1| (PREDICTED: uncharacterized protein LOC104436029 [Eucalyptus grandis]) HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26 Identity = 105/285 (36.84%), Postives = 145/285 (50.88%), Query Frame = 1
BLAST of MELO3C010212 vs. NCBI nr
Match: gi|743869820|ref|XP_011033392.1| (PREDICTED: uncharacterized protein LOC105131897 isoform X1 [Populus euphratica]) HSP 1 Score: 117.1 bits (292), Expect = 5.4e-23 Identity = 89/260 (34.23%), Postives = 130/260 (50.00%), Query Frame = 1
BLAST of MELO3C010212 vs. NCBI nr
Match: gi|743869820|ref|XP_011033392.1| (PREDICTED: uncharacterized protein LOC105131897 isoform X1 [Populus euphratica]) HSP 1 Score: 61.2 bits (147), Expect = 3.5e-06 Identity = 31/95 (32.63%), Postives = 52/95 (54.74%), Query Frame = 1
HSP 2 Score: 36.6 bits (83), Expect = 9.3e+01 Identity = 20/41 (48.78%), Postives = 24/41 (58.54%), Query Frame = 1
HSP 3 Score: 115.2 bits (287), Expect = 2.1e-22 Identity = 90/253 (35.57%), Postives = 124/253 (49.01%), Query Frame = 1
BLAST of MELO3C010212 vs. NCBI nr
Match: gi|802592523|ref|XP_012071630.1| (PREDICTED: uncharacterized protein LOC105633612 [Jatropha curcas]) HSP 1 Score: 52.0 bits (123), Expect = 2.1e-03 Identity = 29/92 (31.52%), Postives = 46/92 (50.00%), Query Frame = 1
HSP 2 Score: 51.6 bits (122), Expect = 2.8e-03 Identity = 31/110 (28.18%), Postives = 54/110 (49.09%), Query Frame = 1
HSP 3 Score: 115.2 bits (287), Expect = 2.1e-22 Identity = 90/253 (35.57%), Postives = 124/253 (49.01%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |