Cp4.1LG07g07020.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGGTAAAATTTAAATTATTTTTACCATTTTTATATTTACTGGAGTGAAAAAAGTATCCAATTTAAAAAAGGAATGGAAATAAATATCTTAAATAAAAAGGAATTTTAAAAAATAAATAATAAAAGAAAAAGAAAAAGAATCCCTTAATTTAAGGGTGAGAGTGGTGAATAAAATCAAATGGTGAAATATTTGAATCAGAAACGGACGTACAAAATGAATTCCTCTGTTCTCTCTCCCCTTTTCTCTACTGCACCTCTCCTTCTCACGCGCTCATCAATGGCGGTGCTTAAGATCCTCTTCTTCTTTTTCCGTTATGCTTAGCCTTCCGCCTCTGCCTCTCGCCGGAATCCGTCTCCTCCGCCTCCTTCTTTGATTTTTCTTTTGCCGTGATCGGACAATGGAGTTCAGGTTCCGTGCCGGCGATCATCGACCACCGCCACCGACTCCGGCGCTGCAGTATGCTTCTCCTTGCCCGCCGCCGGCTGTTTACTGCTTATCTAAGCAAGGATTTTCAGGTTTGTGTTTAAATCTGTATGGACTCTGTGAAATCAAGCGGAGTTGAAGGAACTGGAGAGGCTCTGGCTTTAATATTTCTTCTGGTTTTGGATGTTTCGGATAGTGAATAGTTTTGTTTCGAATAGAGTAATTTTTTTTTTTTTATTGCATTGGAACTGTGGCCTGTATTTAGCTTTTGCGATGAGTAATTTGATTACGATCTGAAATTTGGAAGGAATTCAAATTTTAGGGAAAGGAGTTCTACTTTCATTTTTTTTGTGACTAATTTTACTCTTTTCGATTACGGAAGAGGAATCGTGAGAATTTAGTTCTGCACGATTTCCCCTTAACCGAATGGATTATCTCATAAGTTCTTTTTTATTTTGGTTGTCTAACCTTTGTACTGTAGATCAAGCATTTGAGAGAGGAATCTCGGACTTCTCTTCGTTTTCTTCACTCTTTCTGTTTTTATTGATTTTTTATTTTCGATTTCTTGATGGATTCAACAGACGCCTGTCTCAGAGGAAGCACGAATATTGTCGCAGACAGAAAGCCGTTCGATACCGACGAAGCGATGCATTGCGAGATGGAGTTGATGCGATTGAGAAAAGAGAAATTACTGGTGGAGATTGAACGACAGCAGTTTCTGAAAGAGGACGCGAGGAGAGAACTAGTGTTGTTCGAACGAGAGATGGCGATTCGAGGCTATATTTTCCACAGACACAACCGATGGGGAGGGCCGTTCAGCGCACCGGCAGCGCCATTGTCATTGCCGTCTTCAGCAACAGTGGTGCAGTCGTCCAATGAATGGCCGAAGGTCGAGCAACTGGAAAGTTCTGATCGCCTTGGGTTTGGTGCAGTGCCGTCACCGCCGCGGGTTCGGCCATTAATGGTGGATGACAAGACGGAGCGTCAGGTACTGCAGGATGATGAAAGAGAACTCATTATACTGGTTTGACTCTCTCTCTCTCTCTCTCTCTATATATATATATAATATTATATCAGTCTGTTACCTTCTTTTTTTCTCTATCAACGGTGATTCCATGTTTTAGGGTTTTTCTTGATTTTAACTTTTTAAAAAATGTTTTTGAAGAATTAAAATCACTTTTTTATGACCATCTTTTCGTTAGAATTATTAATTTAGGGACTATTTGATAATATTTCTATTTTCTTGTTACATTTATTTTAAATTTATATGTAAAAAAACTTATATAAAAACCATAGGAAGAAAGTCCCGCATCCCATAATTTAGGGAATGATATCGAGAAATACTTTCTCCATTGATATAAGCATCCCACATCCCATAATTTAGGGAATGATCATGGGTTTATAATGGAGGAATACTCTCTCCATTGATGTAAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGTCTATGCTCAAAGTGGACAATATCGTATCATTGTCGAGAGTCATGTTCATCTAACATGGTATTAGAGCCACGCCCTAAACGTAGTCATGTCAATAGAATCCTCAAATGTCGAACATAGAACTCCAAAAGAAAAAGTGGTCGAGGCTCCTCGAAGGCATAGTAAAAAATGACGAAGACTCCAAAAGAAAAAGGGGTCAAGCCTCGATTAAGAGGAGGCGTACTTTGTTCGAGGGGAGGTGTTGGATGAAAGTCTCACGTTGGCTAATTTAGGGAATGATCATGGGTTTATAAGCAAGGAATACTCTCCATTGATATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAATTGACAATATCATACTATTGTGGAGAGTCGTGTTCATCTAACATGATATCAAAGCCATGCCTAAACTTAGTCATGTCAGTAGAATCCTCAAATGTCGAACAAAGGACTCCAAAAGAAAAAGGAGTCGAGGCTCCACGAAGGCATAGTATAAAATGACGAAGACTCCAAAAGAAAAAGGAGTCAAGCCTCGGGAAGTGTTGGATGAAAGTTCCACATTGACTAATTTAGGTAATGATCATGGGTTTATAATCAAGGAATACTCTCTCCATTTGTACGAGGGCCTTTTAGGGAAGCCTAAAGCAAACCCAAGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTCCATCTAATATATGGTACATTTTACTAATAAAAAATGATAAATGATATTTTTTAATGTGATTTTAATTTGAGTAAGTGATTTTTTGAAAATTCTATGATGTTTGGTGATTAAAAGAAGTATCTTTATAGGGTTACTTTGAAGTTGTTTTTGGATCTTCTTTAGAAAGAAAATGAAAACTCTTAACTGATATACCCTACACTGTTCGTTTGTTAATAAAGAAGTTTGAATAATTTAAAATCACTTGAAACCTTTGGTATGTGTTTACGTCGACGTTTATTGATCATATAAATCAATAATTGACGTGTGATATTTGATTACCAACTTCTAAATATGCTTATATGATATTTGATTACAATCATTTAAAATAATTATGAACTTTTCTTCAATTTTAGAATTGAAAAAAACATATTTTCTTTTTCATTCTCAAATATTATAGTAGGAGTGATGGTCAGTTTTTAATTCTCAAAACAAGGAGTAAGTTGTCATGAATAATTGCATCTCCTATTGTGTCGTTTATTTGGCTCATAACTCTCGTTTATTTAGTTCATAACTCTCGTTTATTTGGCTCATAACTCTCATTTATTTGGCTCATAACTCTGGTTTGTTTGGCTCATAACTCTGGTTTGTTTGGCTCATAACTCTGGTTTGTTTGGCTCATAACTCTGGTTTGTTTGGCTCATAACTCTCGTTTATTTGGTTTGGTTCATAGCTCTTATTTACTTGGTTCATAATCCTTTTGGTTCATATGATACATGAATCAACTTGATTGTATGACATTAATGCTTCTATGCCTATATAAAGGGGTCTCTACGATAGTTGAGATGTATTGAGTTTGAGTGTTCTTTTGTATTTGTTGAGTGACATTTGGGAGGAACTTTGTTGAGACACTTTGTAGTGTGAGAGTGTGAGGTATACACTTTGTAAATGCTTAGATTATTGAGATTGGTTACTATCCATGGATGTAGAGGAATTTTTTATCTCCGAATCAGGTAAATCTTTGTGTCTCTTTGTTTAATTTTTATTTGTGGGTGTGTGAGTGCGATCGATCTAGCTTCCGTTTTTGTCAACGATTGGTATTAGAGCATTTTGGTTGAGGCATTTAGGGTATTCTAATGAAGTCGTCCACGAGATGTGCTCACACTCACTATCAATTATTGAAGACAAATTTCTCATTATAAGCTTCTCATCAATCGAACCACGCTTGTAATGAGAAACTTGTCTTCGATAATTGATGGTGAGTGTGAGCACGTCTCGTGGTCAATGAAGTTAAATCTTTTAGAAAACCCCGGTTAAATCTTTTAGAAACCCCCAGTTAAATCTTTTAGAAACCCCCAGTTAAATCTTTTAGAAAACCCCAAATACCACAACTAAAATGCTCTAATATCAATTGTTGACGGAAACGGAAGATACATTGATCGCACTCGTACACCCACAAAAAGATGCAAAGATTTACGTGGTTCGGAGATAAGAAATTCCCCTACATCCATGGGTAGCAACCAATCTCAATAATCTAAGTGTTTACAATGTGTAAACCTCACTCTCACGCTACAAAGTCTCTCAATAAAATTTCTCCCAAATGTCACTCAACAAATACAAAATGACACTCAAACTCAATACATCTCAATCATCCTACACAACCCTTTATATAGGCATAGAAGCATTAATGTTGTACATGATGATTCATGTGTCAAAATGAAAGATGAACTAAATAAAGGAAAGTTATGAACCAAATAAATAAAAATACTTGCATACGAAATTCATGAACCTATGAAGATTTGTGACAACTTGCAACAATCTCTACCGAAGATCTCCATACAAATAATCAATTTGGCGGCCACCAAATCAACAAACTACTTCGGTTCTACAATTCTTCCAATAGTGGCATTATTTATAGATGAAAATATATTACGCAAAAAGATATTTGTGGGTGAACTGGCTTCCTTGAAATCGAGTGGTTTTACAATCTGATCTTTGATTTCTTCATTTAGGTGAAATTACGGCACTCCAGAGTTTGATGATGGGGTTTATACATACAAAAAAATAAGCTATTTGTATGCAGTGTGCGAGTGTGTTGAAAGCTGCCTTTCTAATTGCTTCATTTCATGATATTGTAAACGTCATGTTTAGAGGAGTTCATTCCTTATGAATTTGTGAATACTTTGCAGGAAAAACCCGACCCGAATGTATTTAGAGAAAAGAGGAAAGCCGAGACGCCATCGACTTTCACCGACGACGTCCAACCATTCAGTGTGAAGCAAAATCCCAAGGATGAGTGGATTTGTGTACTGTGTCAAGTTACCGTGTTGAGCCAAAGTACTTTTGATCAACACCTTCATGGCAAGAAGCACAAACGCAAAGAAGCAGGTCTGAGGGCTCAAAAGGCGAGCAACGTTGCGCCCGAGCCATTACCGAACAAAAGGAGGAAGCTAGTTGAAGTCGAGGCGACGTCTGGGTCGACATGTGCAGAAGTAAAGGAGTCAAAAGATGGAGAAACTCTTCAATGTGAGAAAACAGGAAGTAGTTCTGATTTGAAATTAGACGAAAACTTTATAACTGAGGATGTTGTTGTGGGGAAAAAGAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTTTTGCTACAGAGGTGATGGTAGATCATCTGAATGGGAAGAAGCACAAGGCAAGTCTTCGATAAGAAGAAAGTTGAGAGTGCAGCAGCTGTAGATACGAGTCGAGTCGAGTCGAGTGGACGGTCTACGACGACAGGTGTTGCCCCATGGTTCGGCAGATGAAAAAGGTCAGTGAGGTGTTTCTCATGTTCTTTAAAGTGTGTCAATAAATAGATAAAGAGCTAGAAAATCTAACCAGATCTGGGTAGGAAGTAGAATTTAGATGAACTTTTAGAATTGTGAAGCTAATTGGAAGTACTATTACAATTGACTTTGTTTATGATTCTAGCTCGTTGTTATGGTCACGGTGGTGATTACTGAAAATTATTTTCATGGCAAGGGTGGGAGCGACGAGTAGGGTAAAGAAGTGGATAGAGAAGTTGGTCATGGGACAACTTCGAGTTTTATGATTTTCTTATTTATTTAAGATGCATTGAATTAATTTTAGTTGTTTGAAATTTGTTAGGCACCCTTAGTTATGGGAACAATGAAATTCAGACCGTT AGGGTAAAATTTAAATTATTTTTACCATTTTTATATTTACTGGAGTGAAAAAAGTATCCAATTTAAAAAAGGAATGGAAATAAATATCTTAAATAAAAAGGAATTTTAAAAAATAAATAATAAAAGAAAAAGAAAAAGAATCCCTTAATTTAAGGGTGAGAGTGGTGAATAAAATCAAATGGTGAAATATTTGAATCAGAAACGGACGTACAAAATGAATTCCTCTGTTCTCTCTCCCCTTTTCTCTACTGCACCTCTCCTTCTCACGCGCTCATCAATGGCGGTGCTTAAGATCCTCTTCTTCTTTTTCCGTTATGCTTAGCCTTCCGCCTCTGCCTCTCGCCGGAATCCGTCTCCTCCGCCTCCTTCTTTGATTTTTCTTTTGCCGTGATCGGACAATGGAGTTCAGGTTCCGTGCCGGCGATCATCGACCACCGCCACCGACTCCGGCGCTGCAGTATGCTTCTCCTTGCCCGCCGCCGGCTGTTTACTGCTTATCTAAGCAAGGATTTTCAGACGCCTGTCTCAGAGGAAGCACGAATATTGTCGCAGACAGAAAGCCGTTCGATACCGACGAAGCGATGCATTGCGAGATGGAGTTGATGCGATTGAGAAAAGAGAAATTACTGGTGGAGATTGAACGACAGCAGTTTCTGAAAGAGGACGCGAGGAGAGAACTAGTGTTGTTCGAACGAGAGATGGCGATTCGAGGCTATATTTTCCACAGACACAACCGATGGGGAGGGCCGTTCAGCGCACCGGCAGCGCCATTGTCATTGCCGTCTTCAGCAACAGTGGTGCAGTCGTCCAATGAATGGCCGAAGGTCGAGCAACTGGAAAGTTCTGATCGCCTTGGGTTTGGTGCAGAAAAACCCGACCCGAATGTATTTAGAGAAAAGAGGAAAGCCGAGACGCCATCGACTTTCACCGACGACGTCCAACCATTCAGTGTGAAGCAAAATCCCAAGGATGAGTGGATTTGTGTACTGTGTCAAGTTACCGTGTTGAGCCAAAGTACTTTTGATCAACACCTTCATGGCAAGAAGCACAAACGCAAAGAAGCAGGTCTGAGGGCTCAAAAGGCGAGCAACGTTGCGCCCGAGCCATTACCGAACAAAAGGAGGAAGCTAGTTGAAGTCGAGGCGACGTCTGGGTCGACATGTGCAGAAGTAAAGGAGTCAAAAGATGGAGAAACTCTTCAATGTGAGAAAACAGGAAGTAGTTCTGATTTGAAATTAGACGAAAACTTTATAACTGAGGATGTTGTTGTGGGGAAAAAGAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTTTTGCTACAGAGGTGATGGTAGATCATCTGAATGGGAAGAAGCACAAGGCAAGTCTTCGATAAGAAGAAAGTTGAGAGTGCAGCAGCTGTAGATACGAGTCGAGTCGAGTCGAGTGGACGGTCTACGACGACAGGTGTTGCCCCATGGTTCGGCAGATGAAAAAGGTCAGTGAGGTGTTTCTCATGTTCTTTAAAGTGTGTCAATAAATAGATAAAGAGCTAGAAAATCTAACCAGATCTGGGTAGGAAGTAGAATTTAGATGAACTTTTAGAATTGTGAAGCTAATTGGAAGTACTATTACAATTGACTTTGTTTATGATTCTAGCTCGTTGTTATGGTCACGGTGGTGATTACTGAAAATTATTTTCATGGCAAGGGTGGGAGCGACGAGTAGGGTAAAGAAGTGGATAGAGAAGTTGGTCATGGGACAACTTCGAGTTTTATGATTTTCTTATTTATTTAAGATGCATTGAATTAATTTTAGTTGTTTGAAATTTGTTAGGCACCCTTAGTTATGGGAACAATGAAATTCAGACCGTT ATGGAGTTCAGGTTCCGTGCCGGCGATCATCGACCACCGCCACCGACTCCGGCGCTGCAGTATGCTTCTCCTTGCCCGCCGCCGGCTGTTTACTGCTTATCTAAGCAAGGATTTTCAGACGCCTGTCTCAGAGGAAGCACGAATATTGTCGCAGACAGAAAGCCGTTCGATACCGACGAAGCGATGCATTGCGAGATGGAGTTGATGCGATTGAGAAAAGAGAAATTACTGGTGGAGATTGAACGACAGCAGTTTCTGAAAGAGGACGCGAGGAGAGAACTAGTGTTGTTCGAACGAGAGATGGCGATTCGAGGCTATATTTTCCACAGACACAACCGATGGGGAGGGCCGTTCAGCGCACCGGCAGCGCCATTGTCATTGCCGTCTTCAGCAACAGTGGTGCAGTCGTCCAATGAATGGCCGAAGGTCGAGCAACTGGAAAGTTCTGATCGCCTTGGGTTTGGTGCAGAAAAACCCGACCCGAATGTATTTAGAGAAAAGAGGAAAGCCGAGACGCCATCGACTTTCACCGACGACGTCCAACCATTCAGTGTGAAGCAAAATCCCAAGGATGAGTGGATTTGTGTACTGTGTCAAGTTACCGTGTTGAGCCAAAGTACTTTTGATCAACACCTTCATGGCAAGAAGCACAAACGCAAAGAAGCAGGTCTGAGGGCTCAAAAGGCGAGCAACGTTGCGCCCGAGCCATTACCGAACAAAAGGAGGAAGCTAGTTGAAGTCGAGGCGACGTCTGGGTCGACATGTGCAGAAGTAAAGGAGTCAAAAGATGGAGAAACTCTTCAATGTGAGAAAACAGGAAGTAGTTCTGATTTGAAATTAGACGAAAACTTTATAACTGAGGATGTTGTTGTGGGGAAAAAGAAGTTCAAGTTTTGGTGTGAAAAGTGCAAAGTTGGTGCTTTTGCTACAGAGGTGATGGTAGATCATCTGAATGGGAAGAAGCACAAGGCAAGTCTTCGATAA MEFRFRAGDHRPPPPTPALQYASPCPPPAVYCLSKQGFSDACLRGSTNIVADRKPFDTDEAMHCEMELMRLRKEKLLVEIERQQFLKEDARRELVLFEREMAIRGYIFHRHNRWGGPFSAPAAPLSLPSSATVVQSSNEWPKVEQLESSDRLGFGAEKPDPNVFREKRKAETPSTFTDDVQPFSVKQNPKDEWICVLCQVTVLSQSTFDQHLHGKKHKRKEAGLRAQKASNVAPEPLPNKRRKLVEVEATSGSTCAEVKESKDGETLQCEKTGSSSDLKLDENFITEDVVVGKKKFKFWCEKCKVGAFATEVMVDHLNGKKHKASLR
BLAST of Cp4.1LG07g07020.1 vs. TrEMBL
Match: A0A0A0LJ38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G035540 PE=4 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 4.9e-77 Identity = 189/408 (46.32%), Postives = 234/408 (57.35%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. TrEMBL
Match: B9STT6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0623850 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.6e-27 Identity = 119/386 (30.83%), Postives = 173/386 (44.82%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. TrEMBL
Match: A0A067L3P2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04047 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 6.1e-27 Identity = 132/388 (34.02%), Postives = 184/388 (47.42%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. TrEMBL
Match: A0A059CKW4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00251 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.1e-23 Identity = 110/357 (30.81%), Postives = 157/357 (43.98%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. TrEMBL
Match: F6HYK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00400 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 5.3e-23 Identity = 79/208 (37.98%), Postives = 102/208 (49.04%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. TAIR10
Match: AT5G61190.1 (AT5G61190.1 putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain) HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06 Identity = 43/146 (29.45%), Postives = 65/146 (44.52%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. NCBI nr
Match: gi|449454103|ref|XP_004144795.1| (PREDICTED: uncharacterized protein LOC101215299 isoform X2 [Cucumis sativus]) HSP 1 Score: 297.0 bits (759), Expect = 4.1e-77 Identity = 189/406 (46.55%), Postives = 234/406 (57.64%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. NCBI nr
Match: gi|778667249|ref|XP_011648895.1| (PREDICTED: uncharacterized protein LOC101215299 isoform X1 [Cucumis sativus]) HSP 1 Score: 296.2 bits (757), Expect = 7.0e-77 Identity = 189/408 (46.32%), Postives = 234/408 (57.35%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. NCBI nr
Match: gi|659069985|ref|XP_008452753.1| (PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X3 [Cucumis melo]) HSP 1 Score: 252.7 bits (644), Expect = 8.9e-64 Identity = 177/405 (43.70%), Postives = 221/405 (54.57%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. NCBI nr
Match: gi|659069981|ref|XP_008452738.1| (PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X1 [Cucumis melo]) HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63 Identity = 178/411 (43.31%), Postives = 221/411 (53.77%), Query Frame = 1
BLAST of Cp4.1LG07g07020.1 vs. NCBI nr
Match: gi|659069983|ref|XP_008452745.1| (PREDICTED: hepatoma-derived growth factor-related protein 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 247.3 bits (630), Expect = 3.7e-62 Identity = 178/411 (43.31%), Postives = 221/411 (53.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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