Cp4.1LG06g05720 (gene) Cucurbita pepo (Zucchini)

BLAST of Cp4.1LG06g05720 vs. Swiss-Prot
Match: PP131_ARATH (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 1.5e-196
Identity = 344/541 (63.59%), Postives = 432/541 (79.85%), Query Frame = 1

Query: 11  SLNKGFSKVSTSAQITISPKDTIFPLP--NWR--IGKG----DQKSRELRLNDAFFHLEF 70
           S++KG ++V  S QIT+SPKD+ F +   +W+  +  G    D +S E  L+D+F HLE 
Sbjct: 37  SVSKGVARVLASTQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLES 96

Query: 71  MIENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGN 130
           ++  G KP+  H+T+LLYDLCKA ++KKA++V+E+ + SGIIPDAS+YT+LV+ LCK+GN
Sbjct: 97  LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156

Query: 131 VGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSF 190
           VGYAMQLVEKME++GYP+NTVTYN+LVRGLCM G+L++SLQ ++RL+QKGL P+A+TYSF
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216

Query: 191 LLEAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQG 250
           LLEAAYKERG D A+KLL+EII KGG+ NLVSYNVLLTG CKEGR  DA+ LFRELP++G
Sbjct: 217 LLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276

Query: 251 FSPNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGH 310
           F  NVVSYNILLR LC +GRW+EAN LLAEM  DG DR+PS VTYNILI SL+ HGR   
Sbjct: 277 FKANVVSYNILLRCLCCDGRWEEANSLLAEM--DGGDRAPSVVTYNILINSLAFHGRTEQ 336

Query: 311 ALEVLEEMIRAG--FKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAI 370
           AL+VL+EM +    F+  A+SYNP+IARLCK+ KVD+VVKCLDEM++R C PNEGTYNAI
Sbjct: 337 ALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 396

Query: 371 ATLCE-EGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGF 430
            +LCE    VQEAF IIQSL NK    T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF
Sbjct: 397 GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 456

Query: 431 TPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-NYKPRTENYNSLVLGCCKSRRTDLAF 490
            PD+ TYS+LIRGLC+EGM   A+E+ S+MEE+ N KP  +N+N+++LG CK RRTDLA 
Sbjct: 457 DPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAM 516

Query: 491 EVFEIMVGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYY 540
           EVFE+MV K  +PNETTY ILVEGI  E E++L  ++L EL+LR VI Q+ V+R+VMQ+ 
Sbjct: 517 EVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFN 575

BLAST of Cp4.1LG06g05720 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.1e-103
Identity = 193/489 (39.47%), Postives = 301/489 (61.55%), Query Frame = 1

Query: 46  QKSRELRLNDAFFHLEFMIENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIP 105
           Q  R   L + F  LE M+ +G  PD    T L+   C+  K +KA K++E+  GSG +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170

Query: 106 DASSYTFLVSSLCKKGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLL 165
           D  +Y  ++S  CK G +  A+ ++++M       + VTYN+++R LC  G L +++++L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 230

Query: 166 DRLIQKGLVPDAYTYSFLLEAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKE 225
           DR++Q+   PD  TY+ L+EA  ++ G   A+KLL+E+  +G   ++V+YNVL+ G+CKE
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290

Query: 226 GRIGDAIQLFRELPSQGFSPNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNV 285
           GR+ +AI+   ++PS G  PNV+++NI+LRS+C  GRW +A  LLA+M   G   SPS V
Sbjct: 291 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG--FSPSVV 350

Query: 286 TYNILIGSLSLHGRIGHALEVLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEM 345
           T+NILI  L   G +G A+++LE+M + G +P + SYNP++   CK++K+D  ++ L+ M
Sbjct: 351 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 410

Query: 346 MHRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNT 405
           + R C P+  TYN + T LC++G V++A  I+  L +K  S     Y  VI  L + G T
Sbjct: 411 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 470

Query: 406 YPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSL 465
             A +LL EM      PD+ TYSSL+ GL  EG ++EAI+ F   E    +P    +NS+
Sbjct: 471 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 530

Query: 466 VLGCCKSRRTDLAFEVFEIMVGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDV 525
           +LG CKSR+TD A +    M+ +G  PNET+YTIL+EG+  E       +LL EL  + +
Sbjct: 531 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 590

Query: 526 ISQSTVERL 534
           + +S+ E++
Sbjct: 591 MKKSSAEQV 594

BLAST of Cp4.1LG06g05720 vs. Swiss-Prot
Match: PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.6e-86
Identity = 172/475 (36.21%), Postives = 269/475 (56.63%), Query Frame = 1

Query: 60  LEFMIENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCK 119
           LE M+  G  PD    T+L+        + KAV+VME+    G  PD  +Y  L++  CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 171

Query: 120 KGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYT 179
              +  A +++++M    +  +TVTYN ++  LC  G L  +L++L++L+     P   T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231

Query: 180 YSFLLEAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELP 239
           Y+ L+EA   E G D A+KL++E++++G K ++ +YN ++ G+CKEG +  A ++ R L 
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291

Query: 240 SQGFSPNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGR 299
            +G  P+V+SYNILLR+L  +G+W+E   L+ +M  +  D  P+ VTY+ILI +L   G+
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PNVVTYSILITTLCRDGK 351

Query: 300 IGHALEVLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNA 359
           I  A+ +L+ M   G  P A SY+P+IA  C++ ++DV ++ L+ M+   C P+   YN 
Sbjct: 352 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 411

Query: 360 I-ATLCEEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYG 419
           + ATLC+ G   +A  I   LG    S     Y  + ++L   G+   A  ++ EM   G
Sbjct: 412 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 471

Query: 420 FTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAF 479
             PD  TY+S+I  LC EGM++EA E+   M    + P    YN ++LG CK+ R + A 
Sbjct: 472 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 531

Query: 480 EVFEIMVGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERL 534
            V E MVG G  PNETTYT+L+EGI          +L  +L   D IS+ + +RL
Sbjct: 532 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583

BLAST of Cp4.1LG06g05720 vs. Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 8.7e-64
Identity = 129/439 (29.38%), Postives = 231/439 (52.62%), Query Frame = 1

Query: 83  CKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVEKMEEYGYPTNT 142
           C+  K+  A   M   I  G  PD  +++ L++ LC +G V  A++LV++M E G+    
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177

Query: 143 VTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYKERGADAAIKLLEE 202
           +T N+LV GLC++G +S ++ L+DR+++ G  P+  TY  +L+   K      A++LL +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237

Query: 203 IIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVSYNILLRSLCYEGR 262
           +  +  K + V Y++++ GLCK+G + +A  LF E+  +GF  +++ Y  L+R  CY GR
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297

Query: 263 WDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEEMIRAGFKPMASSY 322
           WD+   LL +M       +P  V ++ LI      G++  A E+ +EMI+ G  P   +Y
Sbjct: 298 WDDGAKLLRDM--IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 357

Query: 323 NPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGN 382
             +I   CK+ ++D     LD M+ + C PN  T+N +    C+  ++ +   + + +  
Sbjct: 358 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 417

Query: 383 KHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNE 442
           +   +    Y  +I   C  G    A +L  EM      PD  +Y  L+ GLC  G   +
Sbjct: 418 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 477

Query: 443 AIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGYLPNETTYTILVE 502
           A+EIF  +E++  +     YN ++ G C + + D A+++F  +  KG  P+  TY I++ 
Sbjct: 478 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 537

Query: 503 GIIQEKEIDLGTKLLRELQ 521
           G+ ++  +     L R+++
Sbjct: 538 GLCKKGSLSEADLLFRKME 554

BLAST of Cp4.1LG06g05720 vs. Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-63
Identity = 135/456 (29.61%), Postives = 236/456 (51.75%), Query Frame = 1

Query: 66  NGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGY 125
           NG + D +  T ++   C+  K+  A  V+      G  PD  +++ LV+  C +G V  
Sbjct: 99  NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158

Query: 126 AMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLE 185
           A+ LV++M E     + VT ++L+ GLC+ G +S++L L+DR+++ G  PD  TY  +L 
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218

Query: 186 AAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSP 245
              K   +  A+ L  ++  +  KA++V Y++++  LCK+G   DA+ LF E+  +G   
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278

Query: 246 NVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALE 305
           +VV+Y+ L+  LC +G+WD+   +L EM   G +  P  VT++ LI      G++  A E
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPDVVTFSALIDVFVKEGKLLEAKE 338

Query: 306 VLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYN-AIATLC 365
           +  EMI  G  P   +YN +I   CK+  +    +  D M+ + C P+  TY+  I + C
Sbjct: 339 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 398

Query: 366 EEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSF 425
           +   V +   + + + +K        Y  ++   C+ G    A +L  EM   G  P   
Sbjct: 399 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 458

Query: 426 TYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIM 485
           TY  L+ GLC  G LN+A+EIF  M+++        YN ++ G C + + D A+ +F  +
Sbjct: 459 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 518

Query: 486 VGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQ 521
             KG  P+  TY +++ G+ ++  +     L R+++
Sbjct: 519 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

BLAST of Cp4.1LG06g05720 vs. TrEMBL
Match: E5GBB3_CUCME (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 945.3 bits (2442), Expect = 3.3e-272
Identity = 471/535 (88.04%), Postives = 500/535 (93.46%), Query Frame = 1

Query: 10  LSLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLEFMIENGQK 69
           LSLNKGFSKV  S QITISPKDTIF LPNW+ GK +QKS+ELRL DAFFHLEFM+E GQK
Sbjct: 35  LSLNKGFSKVLASTQITISPKDTIFTLPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQK 94

Query: 70  PDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQL 129
           PD F AT+LLYDLCKACKM+KA+KVMEM IGSGIIPDASSYTFLVSSLC+KGNVGYAMQL
Sbjct: 95  PDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQL 154

Query: 130 VEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYK 189
           V+KMEEYGYPTNTVTYNSLVRGLCMHGNL++SLQLLDRLIQKGLVP+AYTYSFLLEAAYK
Sbjct: 155 VDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYK 214

Query: 190 ERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVS 249
           ERGAD A KLL+EIIAKGG+ NLVSYNVLLTGLCKEGR  DAI+LFRELPS+GFSPNVVS
Sbjct: 215 ERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVS 274

Query: 250 YNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEE 309
           YNILLRSLC EGRW+EANVLLAEM  +GD+RSPS VTYNILIGSL+LHGR  HALEVLEE
Sbjct: 275 YNILLRSLCNEGRWEEANVLLAEM--NGDERSPSTVTYNILIGSLALHGRTEHALEVLEE 334

Query: 310 MIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIATLCEEGMV 369
           MIRA FKP ASSYNPIIA LCKD K+D+VVKCLD+MM+RHCNPNEGTYNAIATLCEEGMV
Sbjct: 335 MIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMV 394

Query: 370 QEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 429
           QEAFSIIQSLGNK HSSTQEFYK VITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL
Sbjct: 395 QEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 454

Query: 430 IRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGY 489
           IRGLCMEGMLNEAIEIFSVMEENN KP TENYNSL+LGCCKSRRTDLA +VFEIMVGKGY
Sbjct: 455 IRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGY 514

Query: 490 LPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKELPL 545
           LPNETTYTILVEGII EKE+DL TK+LRELQLRDVISQST+ERLVMQY L ELPL
Sbjct: 515 LPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLVMQYDLNELPL 566

BLAST of Cp4.1LG06g05720 vs. TrEMBL
Match: A0A0A0L2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G613170 PE=4 SV=1)

HSP 1 Score: 942.6 bits (2435), Expect = 2.2e-271
Identity = 471/535 (88.04%), Postives = 498/535 (93.08%), Query Frame = 1

Query: 10  LSLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLEFMIENGQK 69
           LSLNKGFSKV  S QITISPKDTIF LPNW+IGK DQKS+ELRLNDAFFHLEFM+E GQK
Sbjct: 35  LSLNKGFSKVLASTQITISPKDTIFTLPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQK 94

Query: 70  PDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQL 129
           PD F AT+LLYDLCK CKM+KA+KVMEM IGSGIIPDA+SYTFLVSSLC+KGNVGYAMQL
Sbjct: 95  PDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQL 154

Query: 130 VEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYK 189
           V+KMEEYGYPTNT TYNSLVRGLCMHGNL++SLQLLDRLIQKGLVP+AYTYSFLLEAAYK
Sbjct: 155 VDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYK 214

Query: 190 ERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVS 249
           ERGAD A KLL+EIIAKGGK NLVSYNVLLTGLCKEGR  DA+QLFRELPS+GFSPNVVS
Sbjct: 215 ERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVS 274

Query: 250 YNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEE 309
           YNILLRSLC EGRW+EANVLLAEM  DGD+RSPS VTYNILIGSL+LHGR  HALEVLEE
Sbjct: 275 YNILLRSLCNEGRWEEANVLLAEM--DGDERSPSTVTYNILIGSLTLHGRTEHALEVLEE 334

Query: 310 MIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIATLCEEGMV 369
           MIRA FKP ASSYNPIIARLCKDRKVD+VVKCLD+MM+RHCNPNEGTYNAIATLCEEGMV
Sbjct: 335 MIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMV 394

Query: 370 QEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 429
           QEAFSIIQSLGNK H STQEFYK VITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL
Sbjct: 395 QEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 454

Query: 430 IRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGY 489
           IRGLCMEGMLNEAIEIFSVMEE N K  TENYNSL+LGCCKSRRTDLA +VFEIMVGKGY
Sbjct: 455 IRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGY 514

Query: 490 LPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKELPL 545
           L NETTYTILVEGII EKE+DL T++LRELQLRDVI+QSTVERLVMQY L ELPL
Sbjct: 515 LANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLVMQYDLNELPL 566

BLAST of Cp4.1LG06g05720 vs. TrEMBL
Match: A5AJ76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00450 PE=4 SV=1)

HSP 1 Score: 810.1 bits (2091), Expect = 1.7e-231
Identity = 395/543 (72.74%), Postives = 467/543 (86.00%), Query Frame = 1

Query: 5   SPYPNL---SLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLE 64
           S  PNL   SLNKGFS+V  S QITISPKD +F LPNWR GK D ++R+LRLNDAF +LE
Sbjct: 27  SQVPNLHTLSLNKGFSRVLASTQITISPKDNVFTLPNWRSGKNDPRTRDLRLNDAFLYLE 86

Query: 65  FMIENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKG 124
           +MI  G KPD   AT+L+Y+LCK+ KM+KA KVME+ IGSG  PD +S TFLV++LCK+G
Sbjct: 87  YMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNNLCKRG 146

Query: 125 NVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYS 184
           NVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLS+SLQ+LD+ ++KGLVP+ +TYS
Sbjct: 147 NVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYS 206

Query: 185 FLLEAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQ 244
           FLLEAAYKERGAD AI+LL+EI+AKGGK NLVSYNVLLTGLCKEGR  +A+Q FR+LPS+
Sbjct: 207 FLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSK 266

Query: 245 GFSPNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIG 304
           GFSPNVVSYNILLRSLCYEGRW++A  LLAEM  DG +RSPS VT+NILIGSL+LHG+  
Sbjct: 267 GFSPNVVSYNILLRSLCYEGRWEKAKELLAEM--DGGERSPSIVTFNILIGSLALHGQTD 326

Query: 305 HALEVLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIA 364
            ALEVL++M RA FK  A+SYNPIIARLCK+ KVD+VVKCLD+MM+R CNPNEGTYNAIA
Sbjct: 327 QALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIA 386

Query: 365 TLCEEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTP 424
            LCEEG VQEAFSIIQSLGNK +SST +FYK VI+SLCRKGNTYPAFQLLYEMTKYGF P
Sbjct: 387 VLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVP 446

Query: 425 DSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVF 484
           DS+TYSSLIRGLC EGML+EA+EIFS+MEEN  +P  +N+N+L+LG CK R+TDL+  VF
Sbjct: 447 DSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVF 506

Query: 485 EIMVGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKE 544
           E+MV KGY+PNETTYTI+VEGI  ++E++L   +L+EL LR  + +ST+ERLVMQY L+ 
Sbjct: 507 EMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLRQAVGRSTLERLVMQYDLEG 566

BLAST of Cp4.1LG06g05720 vs. TrEMBL
Match: A0A061FH66_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_032450 PE=4 SV=1)

HSP 1 Score: 810.1 bits (2091), Expect = 1.7e-231
Identity = 390/538 (72.49%), Postives = 468/538 (86.99%), Query Frame = 1

Query: 8   PNL---SLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLEFMI 67
           PNL   SLNKGF++V  + QITISPKD++F LPNW+ GK D KSRELRLNDAFFH+E+M+
Sbjct: 30  PNLHSFSLNKGFTRVLATTQITISPKDSVFTLPNWKTGKNDTKSRELRLNDAFFHMEYMV 89

Query: 68  ENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVG 127
             GQKPD   AT+LLYDLCKA KMKK+++V+EM + SGIIPDA+SYTFLV+ LCK+GNVG
Sbjct: 90  GKGQKPDVAQATQLLYDLCKANKMKKSIRVLEMMVNSGIIPDAASYTFLVNHLCKRGNVG 149

Query: 128 YAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLL 187
           +AMQLVEKME +GYPTNTVTYNSLVRGLCMHGNL++SLQLLD+LIQ+GLVP+A+TYSFLL
Sbjct: 150 HAMQLVEKMEAHGYPTNTVTYNSLVRGLCMHGNLNQSLQLLDKLIQRGLVPNAFTYSFLL 209

Query: 188 EAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFS 247
           EAAYKE+G + A+KLL++IIAKGGK NLVSYNVLLTGLCKEGR  +AI+ FR LP++GF 
Sbjct: 210 EAAYKEKGVNEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFFRNLPAKGFD 269

Query: 248 PNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHAL 307
           PNVVSYNILLR+LCYEG+W EAN LLAEM  DG+DRSPS VTYNILIGSL+LHGR  HAL
Sbjct: 270 PNVVSYNILLRNLCYEGQWKEANELLAEM--DGEDRSPSVVTYNILIGSLALHGRTEHAL 329

Query: 308 EVLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIATLC 367
           +VL+EMIR  FK  A+SYNPIIARLC+++KVD+VVKCLD+M++R C PNEGTYNA A LC
Sbjct: 330 DVLDEMIRGRFKATATSYNPIIARLCQEKKVDLVVKCLDQMIYRRCKPNEGTYNATAVLC 389

Query: 368 EEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSF 427
           E+GMVQEAFSIIQSLG+K  S + +FYK VI+SLCRKGNTYPAFQLLYEMTK GF PDS+
Sbjct: 390 EQGMVQEAFSIIQSLGSKQSSPSHDFYKSVISSLCRKGNTYPAFQLLYEMTKSGFNPDSY 449

Query: 428 TYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIM 487
           TYSSLIRGLC+EGML EA+EI  VMEE+NY+P  +N+N+L+LG CKS RTDL+ +VFE++
Sbjct: 450 TYSSLIRGLCLEGMLQEALEIVIVMEESNYRPDVDNFNALILGFCKSHRTDLSLKVFEMI 509

Query: 488 VGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKEL 543
           + KGY+PNETTYTILVEGI  E +I+L  ++L+EL +R+V+SQ  VERLVMQY L  +
Sbjct: 510 IEKGYMPNETTYTILVEGIAHEGKIELAAEVLKELHVREVVSQHAVERLVMQYNLSAI 565

BLAST of Cp4.1LG06g05720 vs. TrEMBL
Match: A0A0D2U0G5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G354800 PE=4 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 5.4e-230
Identity = 385/532 (72.37%), Postives = 462/532 (86.84%), Query Frame = 1

Query: 11  SLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLEFMIENGQKP 70
           SL+KGFSKV  + QITISPKD++F LPNW+ GK D KSRELRL+DA+FH+E+M+  GQKP
Sbjct: 36  SLSKGFSKVLATTQITISPKDSVFTLPNWKTGKSDSKSRELRLSDAYFHMEYMVGKGQKP 95

Query: 71  DEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLV 130
           D   AT+LLYDLCK  KMKK+++VMEM + SGIIPDA+SYTFLV+ LCK+GNVG+AMQLV
Sbjct: 96  DVVQATQLLYDLCKVNKMKKSIRVMEMMVDSGIIPDAASYTFLVNHLCKRGNVGHAMQLV 155

Query: 131 EKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYKE 190
           EKME +GYPTNTVTYNSLVRGLCMHGNL +SLQLLDRLIQKGLVP+ +TYSFLLEAAYKE
Sbjct: 156 EKMEAHGYPTNTVTYNSLVRGLCMHGNLKQSLQLLDRLIQKGLVPNEFTYSFLLEAAYKE 215

Query: 191 RGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVSY 250
           +G + A KLL+EIIAKGGK NLVSYNVLLTGLCKEGR  +AI+ FR+LP++GF+PNVVSY
Sbjct: 216 KGVNEATKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDEAIRFFRDLPAKGFNPNVVSY 275

Query: 251 NILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEEM 310
           NI+LR+LCYEGRW EAN LLAEM  DGDDRSPS VTYNILIGSL+LHGR  HA++VL+EM
Sbjct: 276 NIVLRNLCYEGRWKEANELLAEM--DGDDRSPSVVTYNILIGSLALHGRTYHAMDVLDEM 335

Query: 311 IRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIATLCEEGMVQ 370
           IR  FK  A+SYNPIIA+LC++ KVD+VVKCLD+M++R C PNEGTYNAIA LCE+GMVQ
Sbjct: 336 IRGRFKVSATSYNPIIAQLCQEEKVDLVVKCLDQMIYRRCKPNEGTYNAIAVLCEQGMVQ 395

Query: 371 EAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 430
           EAFSI QSL +K  SS  +FYK VI+SLCRKGNTYPAFQLLYEMTK GFTPDS+TYSSLI
Sbjct: 396 EAFSIFQSLASKQSSSPNDFYKSVISSLCRKGNTYPAFQLLYEMTKSGFTPDSYTYSSLI 455

Query: 431 RGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGYL 490
           RGLC+EGML  A++IF VMEE+N+KP  +N+N+L+LG CKS RTDL+ +VFE+++ KGY+
Sbjct: 456 RGLCLEGMLQAAMQIFIVMEESNFKPDVDNFNALILGFCKSHRTDLSLKVFEMLIEKGYM 515

Query: 491 PNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKEL 543
           PNETTYTILVEGI  E +++L  ++L+EL +R+V+SQ  VERL+MQY L  +
Sbjct: 516 PNETTYTILVEGIAHEGQMELAAQVLKELHMREVVSQHVVERLIMQYNLSAI 565

BLAST of Cp4.1LG06g05720 vs. TAIR10
Match: AT1G79080.1 (AT1G79080.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 687.2 bits (1772), Expect = 8.3e-198
Identity = 344/541 (63.59%), Postives = 432/541 (79.85%), Query Frame = 1

Query: 11  SLNKGFSKVSTSAQITISPKDTIFPLP--NWR--IGKG----DQKSRELRLNDAFFHLEF 70
           S++KG ++V  S QIT+SPKD+ F +   +W+  +  G    D +S E  L+D+F HLE 
Sbjct: 37  SVSKGVARVLASTQITLSPKDSAFTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLES 96

Query: 71  MIENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGN 130
           ++  G KP+  H+T+LLYDLCKA ++KKA++V+E+ + SGIIPDAS+YT+LV+ LCK+GN
Sbjct: 97  LVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156

Query: 131 VGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSF 190
           VGYAMQLVEKME++GYP+NTVTYN+LVRGLCM G+L++SLQ ++RL+QKGL P+A+TYSF
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216

Query: 191 LLEAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQG 250
           LLEAAYKERG D A+KLL+EII KGG+ NLVSYNVLLTG CKEGR  DA+ LFRELP++G
Sbjct: 217 LLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG 276

Query: 251 FSPNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGH 310
           F  NVVSYNILLR LC +GRW+EAN LLAEM  DG DR+PS VTYNILI SL+ HGR   
Sbjct: 277 FKANVVSYNILLRCLCCDGRWEEANSLLAEM--DGGDRAPSVVTYNILINSLAFHGRTEQ 336

Query: 311 ALEVLEEMIRAG--FKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAI 370
           AL+VL+EM +    F+  A+SYNP+IARLCK+ KVD+VVKCLDEM++R C PNEGTYNAI
Sbjct: 337 ALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 396

Query: 371 ATLCE-EGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGF 430
            +LCE    VQEAF IIQSL NK    T +FYK VITSLCRKGNT+ AFQLLYEMT+ GF
Sbjct: 397 GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF 456

Query: 431 TPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEEN-NYKPRTENYNSLVLGCCKSRRTDLAF 490
            PD+ TYS+LIRGLC+EGM   A+E+ S+MEE+ N KP  +N+N+++LG CK RRTDLA 
Sbjct: 457 DPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAM 516

Query: 491 EVFEIMVGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYY 540
           EVFE+MV K  +PNETTY ILVEGI  E E++L  ++L EL+LR VI Q+ V+R+VMQ+ 
Sbjct: 517 EVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFN 575

BLAST of Cp4.1LG06g05720 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 378.6 bits (971), Expect = 6.3e-105
Identity = 193/489 (39.47%), Postives = 301/489 (61.55%), Query Frame = 1

Query: 46  QKSRELRLNDAFFHLEFMIENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIP 105
           Q  R   L + F  LE M+ +G  PD    T L+   C+  K +KA K++E+  GSG +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170

Query: 106 DASSYTFLVSSLCKKGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLL 165
           D  +Y  ++S  CK G +  A+ ++++M       + VTYN+++R LC  G L +++++L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 230

Query: 166 DRLIQKGLVPDAYTYSFLLEAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKE 225
           DR++Q+   PD  TY+ L+EA  ++ G   A+KLL+E+  +G   ++V+YNVL+ G+CKE
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290

Query: 226 GRIGDAIQLFRELPSQGFSPNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNV 285
           GR+ +AI+   ++PS G  PNV+++NI+LRS+C  GRW +A  LLA+M   G   SPS V
Sbjct: 291 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG--FSPSVV 350

Query: 286 TYNILIGSLSLHGRIGHALEVLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEM 345
           T+NILI  L   G +G A+++LE+M + G +P + SYNP++   CK++K+D  ++ L+ M
Sbjct: 351 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 410

Query: 346 MHRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNT 405
           + R C P+  TYN + T LC++G V++A  I+  L +K  S     Y  VI  L + G T
Sbjct: 411 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 470

Query: 406 YPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSL 465
             A +LL EM      PD+ TYSSL+ GL  EG ++EAI+ F   E    +P    +NS+
Sbjct: 471 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 530

Query: 466 VLGCCKSRRTDLAFEVFEIMVGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDV 525
           +LG CKSR+TD A +    M+ +G  PNET+YTIL+EG+  E       +LL EL  + +
Sbjct: 531 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 590

Query: 526 ISQSTVERL 534
           + +S+ E++
Sbjct: 591 MKKSSAEQV 594

BLAST of Cp4.1LG06g05720 vs. TAIR10
Match: AT3G04760.1 (AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 321.6 bits (823), Expect = 9.2e-88
Identity = 172/475 (36.21%), Postives = 269/475 (56.63%), Query Frame = 1

Query: 60  LEFMIENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCK 119
           LE M+  G  PD    T+L+        + KAV+VME+    G  PD  +Y  L++  CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 171

Query: 120 KGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYT 179
              +  A +++++M    +  +TVTYN ++  LC  G L  +L++L++L+     P   T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231

Query: 180 YSFLLEAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELP 239
           Y+ L+EA   E G D A+KL++E++++G K ++ +YN ++ G+CKEG +  A ++ R L 
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291

Query: 240 SQGFSPNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGR 299
            +G  P+V+SYNILLR+L  +G+W+E   L+ +M  +  D  P+ VTY+ILI +L   G+
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PNVVTYSILITTLCRDGK 351

Query: 300 IGHALEVLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNA 359
           I  A+ +L+ M   G  P A SY+P+IA  C++ ++DV ++ L+ M+   C P+   YN 
Sbjct: 352 IEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNT 411

Query: 360 I-ATLCEEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYG 419
           + ATLC+ G   +A  I   LG    S     Y  + ++L   G+   A  ++ EM   G
Sbjct: 412 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 471

Query: 420 FTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAF 479
             PD  TY+S+I  LC EGM++EA E+   M    + P    YN ++LG CK+ R + A 
Sbjct: 472 IDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAI 531

Query: 480 EVFEIMVGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERL 534
            V E MVG G  PNETTYT+L+EGI          +L  +L   D IS+ + +RL
Sbjct: 532 NVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRL 583

BLAST of Cp4.1LG06g05720 vs. TAIR10
Match: AT1G12620.1 (AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 246.1 bits (627), Expect = 4.9e-65
Identity = 129/439 (29.38%), Postives = 231/439 (52.62%), Query Frame = 1

Query: 83  CKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVEKMEEYGYPTNT 142
           C+  K+  A   M   I  G  PD  +++ L++ LC +G V  A++LV++M E G+    
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177

Query: 143 VTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYKERGADAAIKLLEE 202
           +T N+LV GLC++G +S ++ L+DR+++ G  P+  TY  +L+   K      A++LL +
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237

Query: 203 IIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVSYNILLRSLCYEGR 262
           +  +  K + V Y++++ GLCK+G + +A  LF E+  +GF  +++ Y  L+R  CY GR
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297

Query: 263 WDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEEMIRAGFKPMASSY 322
           WD+   LL +M       +P  V ++ LI      G++  A E+ +EMI+ G  P   +Y
Sbjct: 298 WDDGAKLLRDM--IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 357

Query: 323 NPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIAT-LCEEGMVQEAFSIIQSLGN 382
             +I   CK+ ++D     LD M+ + C PN  T+N +    C+  ++ +   + + +  
Sbjct: 358 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 417

Query: 383 KHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNE 442
           +   +    Y  +I   C  G    A +L  EM      PD  +Y  L+ GLC  G   +
Sbjct: 418 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 477

Query: 443 AIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGYLPNETTYTILVE 502
           A+EIF  +E++  +     YN ++ G C + + D A+++F  +  KG  P+  TY I++ 
Sbjct: 478 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 537

Query: 503 GIIQEKEIDLGTKLLRELQ 521
           G+ ++  +     L R+++
Sbjct: 538 GLCKKGSLSEADLLFRKME 554

BLAST of Cp4.1LG06g05720 vs. TAIR10
Match: AT3G22470.1 (AT3G22470.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 245.7 bits (626), Expect = 6.4e-65
Identity = 135/456 (29.61%), Postives = 236/456 (51.75%), Query Frame = 1

Query: 66  NGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGY 125
           NG + D +  T ++   C+  K+  A  V+      G  PD  +++ LV+  C +G V  
Sbjct: 99  NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158

Query: 126 AMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLE 185
           A+ LV++M E     + VT ++L+ GLC+ G +S++L L+DR+++ G  PD  TY  +L 
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218

Query: 186 AAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSP 245
              K   +  A+ L  ++  +  KA++V Y++++  LCK+G   DA+ LF E+  +G   
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278

Query: 246 NVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALE 305
           +VV+Y+ L+  LC +G+WD+   +L EM   G +  P  VT++ LI      G++  A E
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPDVVTFSALIDVFVKEGKLLEAKE 338

Query: 306 VLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYN-AIATLC 365
           +  EMI  G  P   +YN +I   CK+  +    +  D M+ + C P+  TY+  I + C
Sbjct: 339 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 398

Query: 366 EEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSF 425
           +   V +   + + + +K        Y  ++   C+ G    A +L  EM   G  P   
Sbjct: 399 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 458

Query: 426 TYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIM 485
           TY  L+ GLC  G LN+A+EIF  M+++        YN ++ G C + + D A+ +F  +
Sbjct: 459 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 518

Query: 486 VGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQ 521
             KG  P+  TY +++ G+ ++  +     L R+++
Sbjct: 519 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

BLAST of Cp4.1LG06g05720 vs. NCBI nr
Match: gi|659087133|ref|XP_008444287.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis melo])

HSP 1 Score: 945.3 bits (2442), Expect = 4.8e-272
Identity = 471/535 (88.04%), Postives = 500/535 (93.46%), Query Frame = 1

Query: 10  LSLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLEFMIENGQK 69
           LSLNKGFSKV  S QITISPKDTIF LPNW+ GK +QKS+ELRL DAFFHLEFM+E GQK
Sbjct: 35  LSLNKGFSKVLASTQITISPKDTIFTLPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQK 94

Query: 70  PDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQL 129
           PD F AT+LLYDLCKACKM+KA+KVMEM IGSGIIPDASSYTFLVSSLC+KGNVGYAMQL
Sbjct: 95  PDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQL 154

Query: 130 VEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYK 189
           V+KMEEYGYPTNTVTYNSLVRGLCMHGNL++SLQLLDRLIQKGLVP+AYTYSFLLEAAYK
Sbjct: 155 VDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYK 214

Query: 190 ERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVS 249
           ERGAD A KLL+EIIAKGG+ NLVSYNVLLTGLCKEGR  DAI+LFRELPS+GFSPNVVS
Sbjct: 215 ERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVS 274

Query: 250 YNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEE 309
           YNILLRSLC EGRW+EANVLLAEM  +GD+RSPS VTYNILIGSL+LHGR  HALEVLEE
Sbjct: 275 YNILLRSLCNEGRWEEANVLLAEM--NGDERSPSTVTYNILIGSLALHGRTEHALEVLEE 334

Query: 310 MIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIATLCEEGMV 369
           MIRA FKP ASSYNPIIA LCKD K+D+VVKCLD+MM+RHCNPNEGTYNAIATLCEEGMV
Sbjct: 335 MIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMV 394

Query: 370 QEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 429
           QEAFSIIQSLGNK HSSTQEFYK VITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL
Sbjct: 395 QEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 454

Query: 430 IRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGY 489
           IRGLCMEGMLNEAIEIFSVMEENN KP TENYNSL+LGCCKSRRTDLA +VFEIMVGKGY
Sbjct: 455 IRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGY 514

Query: 490 LPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKELPL 545
           LPNETTYTILVEGII EKE+DL TK+LRELQLRDVISQST+ERLVMQY L ELPL
Sbjct: 515 LPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQSTLERLVMQYDLNELPL 566

BLAST of Cp4.1LG06g05720 vs. NCBI nr
Match: gi|778695367|ref|XP_011653982.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sativus])

HSP 1 Score: 942.6 bits (2435), Expect = 3.1e-271
Identity = 471/535 (88.04%), Postives = 498/535 (93.08%), Query Frame = 1

Query: 10  LSLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLEFMIENGQK 69
           LSLNKGFSKV  S QITISPKDTIF LPNW+IGK DQKS+ELRLNDAFFHLEFM+E GQK
Sbjct: 35  LSLNKGFSKVLASTQITISPKDTIFTLPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQK 94

Query: 70  PDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQL 129
           PD F AT+LLYDLCK CKM+KA+KVMEM IGSGIIPDA+SYTFLVSSLC+KGNVGYAMQL
Sbjct: 95  PDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQL 154

Query: 130 VEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYK 189
           V+KMEEYGYPTNT TYNSLVRGLCMHGNL++SLQLLDRLIQKGLVP+AYTYSFLLEAAYK
Sbjct: 155 VDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYK 214

Query: 190 ERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVS 249
           ERGAD A KLL+EIIAKGGK NLVSYNVLLTGLCKEGR  DA+QLFRELPS+GFSPNVVS
Sbjct: 215 ERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVS 274

Query: 250 YNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEE 309
           YNILLRSLC EGRW+EANVLLAEM  DGD+RSPS VTYNILIGSL+LHGR  HALEVLEE
Sbjct: 275 YNILLRSLCNEGRWEEANVLLAEM--DGDERSPSTVTYNILIGSLTLHGRTEHALEVLEE 334

Query: 310 MIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIATLCEEGMV 369
           MIRA FKP ASSYNPIIARLCKDRKVD+VVKCLD+MM+RHCNPNEGTYNAIATLCEEGMV
Sbjct: 335 MIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMV 394

Query: 370 QEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 429
           QEAFSIIQSLGNK H STQEFYK VITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL
Sbjct: 395 QEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 454

Query: 430 IRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGY 489
           IRGLCMEGMLNEAIEIFSVMEE N K  TENYNSL+LGCCKSRRTDLA +VFEIMVGKGY
Sbjct: 455 IRGLCMEGMLNEAIEIFSVMEE-NIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGY 514

Query: 490 LPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKELPL 545
           L NETTYTILVEGII EKE+DL T++LRELQLRDVI+QSTVERLVMQY L ELPL
Sbjct: 515 LANETTYTILVEGIIHEKEMDLATEVLRELQLRDVINQSTVERLVMQYDLNELPL 566

BLAST of Cp4.1LG06g05720 vs. NCBI nr
Match: gi|645239785|ref|XP_008226294.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Prunus mume])

HSP 1 Score: 820.8 bits (2119), Expect = 1.4e-234
Identity = 397/535 (74.21%), Postives = 466/535 (87.10%), Query Frame = 1

Query: 10  LSLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLEFMIENGQK 69
           L+L+KGFS+V  + QITISPKDT+F LPNWR  K +++SRE+RL DAF HLE M+  GQK
Sbjct: 35  LTLSKGFSRVLATTQITISPKDTVFTLPNWRAAKNNRRSREVRLIDAFLHLESMVGKGQK 94

Query: 70  PDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQL 129
           PD   AT+LLYDLCKA KM+KAV+V+EM + +GIIPDA+SYTFLV+ LCK+GN+GYAMQL
Sbjct: 95  PDVAQATQLLYDLCKANKMRKAVRVIEMMVSAGIIPDAASYTFLVNYLCKRGNIGYAMQL 154

Query: 130 VEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYK 189
           VEKMEEYGYPTNT+TYNSLVRGLC+ GNL++SLQLLDRLIQKGLVP+ YTYSFLLEAAYK
Sbjct: 155 VEKMEEYGYPTNTITYNSLVRGLCVRGNLNQSLQLLDRLIQKGLVPNVYTYSFLLEAAYK 214

Query: 190 ERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVS 249
           ERG + A+KLL+EIIAKGGK NLVSYNVLLTGLCKEGR  +A++ FR LPS GF PNVVS
Sbjct: 215 ERGVNEAMKLLQEIIAKGGKPNLVSYNVLLTGLCKEGRTDEALRFFRNLPSMGFDPNVVS 274

Query: 250 YNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEE 309
           YNI+LRSLCYEGRW+EAN LL+EM  +G+DRSPS VTYNILIGSL+LHGR  HALEVL+E
Sbjct: 275 YNIVLRSLCYEGRWEEANELLSEM--EGEDRSPSIVTYNILIGSLALHGRTEHALEVLDE 334

Query: 310 MIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIATLCEEGMV 369
           M+R  FKP A+SYNPIIA LCK+RKVD V+KCLD+M+HR CNPNEGT+NAIA LCEEGMV
Sbjct: 335 MVRGQFKPSAASYNPIIAHLCKERKVDSVIKCLDQMIHRRCNPNEGTFNAIAVLCEEGMV 394

Query: 370 QEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSL 429
           QEAFSII SL NK   ST EFYK VITSLCRKGNT+PAFQ+LYEMTK GFTPDS+TYSSL
Sbjct: 395 QEAFSIIHSLANKQKCSTNEFYKNVITSLCRKGNTFPAFQILYEMTKRGFTPDSYTYSSL 454

Query: 430 IRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGY 489
           IRGLC+EGML+EA+EIF VMEENN +P T+N+N+LVLG CKSRRTDL+ +VFE+M+ KG 
Sbjct: 455 IRGLCLEGMLDEAMEIFKVMEENNIRPDTDNFNALVLGFCKSRRTDLSLQVFEMMIKKGR 514

Query: 490 LPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKELPL 545
           +PNE TYTILVEGI  E E++L  K+L+EL LR V+S +TVERLVMQY  ++LP+
Sbjct: 515 MPNEMTYTILVEGIAHEGELELAAKVLKELHLRHVMSPNTVERLVMQYDFEDLPV 567

BLAST of Cp4.1LG06g05720 vs. NCBI nr
Match: gi|1009141884|ref|XP_015888425.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 814.3 bits (2102), Expect = 1.3e-232
Identity = 397/543 (73.11%), Postives = 465/543 (85.64%), Query Frame = 1

Query: 5   SPYPNL---SLNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLE 64
           S  PNL   S+NKGF++V  S  ITISPKDT+F +PNWR GK D +S+E RLNDAF H E
Sbjct: 27  SHVPNLHTFSVNKGFARVLASTPITISPKDTVFTVPNWRTGKNDTRSKEFRLNDAFLHFE 86

Query: 65  FMIENGQKPDEFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKG 124
            M+E GQKPD   AT+LLYDLCK  K KKAV+VMEM +GS IIPDA+SYTFLV+ LCK+G
Sbjct: 87  RMVEKGQKPDVAQATQLLYDLCKVNKAKKAVRVMEMMVGSCIIPDAASYTFLVNYLCKRG 146

Query: 125 NVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYS 184
           ++GYAMQLV+KMEEYGYPTNT TYNSL+RG C+ GNL++SLQLLDRL QKGLVP+A+TYS
Sbjct: 147 SIGYAMQLVDKMEEYGYPTNTATYNSLIRGTCLRGNLNQSLQLLDRLKQKGLVPNAFTYS 206

Query: 185 FLLEAAYKERGADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQ 244
            LLEAAYKERG + A+KLL+EIIA GGK NLVSYNVLLTGLCKEGR  +AI  FR LPS 
Sbjct: 207 SLLEAAYKERGVNEAMKLLDEIIANGGKPNLVSYNVLLTGLCKEGRTDEAIHFFRNLPSM 266

Query: 245 GFSPNVVSYNILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIG 304
           GF+PNVVSYNILLR+LCYEGRW+EAN+LLAEMDG   +R+PS VTYNILIGSLSLHGRI 
Sbjct: 267 GFNPNVVSYNILLRNLCYEGRWEEANMLLAEMDGG--ERTPSIVTYNILIGSLSLHGRIE 326

Query: 305 HALEVLEEMIRAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIA 364
           HA  V++EMIR  FKP A+SYNPIIA LCK+ KVD+VVKCLD+MM+R C+PNEGTYNAIA
Sbjct: 327 HAFGVMDEMIRRRFKPTAASYNPIIASLCKEGKVDLVVKCLDQMMYRRCSPNEGTYNAIA 386

Query: 365 TLCEEGMVQEAFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTP 424
            LCEEGM+QEAFSIIQSLGNK  SST +F K VI+SLCRKGNTY AFQLLYEMTKYGFTP
Sbjct: 387 VLCEEGMIQEAFSIIQSLGNKQKSSTHDFSKNVISSLCRKGNTYAAFQLLYEMTKYGFTP 446

Query: 425 DSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVF 484
           DS+TYSSL+RGLCMEGML+EA+EIFSVMEENNY+P TEN+N+L+LG CKS+RTDLA +V+
Sbjct: 447 DSYTYSSLLRGLCMEGMLDEAMEIFSVMEENNYRPNTENFNALILGFCKSQRTDLAVDVY 506

Query: 485 EIMVGKGYLPNETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKE 544
           E+M+ KGY+PNETTY I+VEGI  E E+ +  ++L+ELQ R VI QS+VERL MQY L++
Sbjct: 507 EMMIEKGYMPNETTYIIIVEGIASEGEMGIAARVLKELQQRQVIDQSSVERLAMQYDLED 566

BLAST of Cp4.1LG06g05720 vs. NCBI nr
Match: gi|764558163|ref|XP_011460866.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 811.2 bits (2094), Expect = 1.1e-231
Identity = 398/533 (74.67%), Postives = 460/533 (86.30%), Query Frame = 1

Query: 12  LNKGFSKVSTSAQITISPKDTIFPLPNWRIGKGDQKSRELRLNDAFFHLEFMIENGQKPD 71
           LNKGFS+V  S QITISPKDT+F LPNWR  K D++SRE+RL DAF HLE M   GQKPD
Sbjct: 36  LNKGFSRVLASTQITISPKDTVFTLPNWRNPKNDRRSREVRLIDAFQHLESMTGKGQKPD 95

Query: 72  EFHATRLLYDLCKACKMKKAVKVMEMTIGSGIIPDASSYTFLVSSLCKKGNVGYAMQLVE 131
              AT+LLYDLCKA KM+KA++VMEM + SGIIPDA+SYTFLV+ LCK+GN+GYAMQLVE
Sbjct: 96  VGQATQLLYDLCKASKMRKAMRVMEMMVASGIIPDAASYTFLVNYLCKRGNIGYAMQLVE 155

Query: 132 KMEEYGYPTNTVTYNSLVRGLCMHGNLSKSLQLLDRLIQKGLVPDAYTYSFLLEAAYKER 191
           KMEEYGYPTNT+TYNSLVRGLC+ GNL+KSLQLLD+LI KGLVP+ YTYSFL+EAAYKER
Sbjct: 156 KMEEYGYPTNTITYNSLVRGLCVRGNLNKSLQLLDKLIHKGLVPNVYTYSFLIEAAYKER 215

Query: 192 GADAAIKLLEEIIAKGGKANLVSYNVLLTGLCKEGRIGDAIQLFRELPSQGFSPNVVSYN 251
           G + A+KLLEEIIAKGGK NLVSYNVLLTGLCKEGR  +A++ FR LPS G  PNVVSYN
Sbjct: 216 GVNEAMKLLEEIIAKGGKPNLVSYNVLLTGLCKEGRSDEAMKFFRSLPSMGLRPNVVSYN 275

Query: 252 ILLRSLCYEGRWDEANVLLAEMDGDGDDRSPSNVTYNILIGSLSLHGRIGHALEVLEEMI 311
           I+LRSLCYEGRW+EANVLLAEM  DG+DR PS  TYNILIGSLSLHGR  HALEVL+EM 
Sbjct: 276 IVLRSLCYEGRWEEANVLLAEM--DGEDRIPSVATYNILIGSLSLHGRTEHALEVLDEMA 335

Query: 312 RAGFKPMASSYNPIIARLCKDRKVDVVVKCLDEMMHRHCNPNEGTYNAIATLCEEGMVQE 371
           ++ FKP A+SYNPIIARLCK+ KVD VVKCLD+M+ + CN NEGT+NAIA LCE+G VQ+
Sbjct: 336 KSRFKPTAASYNPIIARLCKEGKVDHVVKCLDQMIFQRCNRNEGTFNAIAVLCEQGKVQQ 395

Query: 372 AFSIIQSLGNKHHSSTQEFYKFVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIR 431
           A+SIIQSLGNK   ST EFY+ VITSLCRKGNTYPA Q+LYEMTKY FTPDS+TYSSLIR
Sbjct: 396 AYSIIQSLGNKQKCSTTEFYRNVITSLCRKGNTYPALQILYEMTKYRFTPDSYTYSSLIR 455

Query: 432 GLCMEGMLNEAIEIFSVMEENNYKPRTENYNSLVLGCCKSRRTDLAFEVFEIMVGKGYLP 491
           GLC+EGMLNEA+EIF VMEENN +P TEN+N+L+LG CK RRTDLA +VFE+M+ KG +P
Sbjct: 456 GLCLEGMLNEAVEIFKVMEENNQRPDTENFNALLLGICKCRRTDLALQVFEMMIEKGRMP 515

Query: 492 NETTYTILVEGIIQEKEIDLGTKLLRELQLRDVISQSTVERLVMQYYLKELPL 545
           NE TYTILVEG+  EKE++L T++LRELQ R V+S +TVERLVMQY L+E+PL
Sbjct: 516 NEMTYTILVEGLAHEKEMELATEVLRELQGRRVMSPNTVERLVMQYDLEEIPL 566