BLAST of CmoCh01G013560 vs. Swiss-Prot
Match:
PP131_ARATH (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 754.6 bits (1947), Expect = 7.8e-217
Identity = 381/577 (66.03%), Postives = 470/577 (81.46%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPN--LHKLSLSKGFSKVLASTQVTISPKDTI 60
M+TLLN+V + +P + R+ GF SHIP+ LH S+SKG ++VLASTQ+T+SPKD+
Sbjct: 1 MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60
Query: 61 FTLP--NWR--IGKG----DQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKA 120
FT+ +W+ + G D ++ E L+D+F +LE LV G KP+V +TQLLYDLCKA
Sbjct: 61 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120
Query: 121 SKLRRAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTY 180
++L++AI+V+E+M+ SGIIPDAS+YT+LV+ LCKRGNVGYAMQLV+KME++GYP+NTVTY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180
Query: 181 NSLVRGLCMHGNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIA 240
N+LVRGLCM G+L SLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEAVKLLDEII
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240
Query: 241 KGGKPNLVSYNVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEE 300
KGG+PNLVSYNVLLTG CKEGRTDDA+ LFRELP+KGF NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300
Query: 301 ANVLLAEMDGDDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
AN LLAEMDG DRAPS VTYN LI SLAFHGRTE AL+VL+EM + +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360
Query: 361 IARLCRDKKVDLVVKCLDQMIYRHCNPNEGTYNAIATLCE-VGMVQEAFSILQSLGNKQH 420
IARLC++ KVDLVVKCLD+MIYR C PNEGTYNAI +LCE VQEAF I+QSL NKQ
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420
Query: 421 YSTQEFYKSVITSLCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIE 480
T +FYKSVITSLCRKGNT++AFQLLYEMT+ GF PD+ YS+LIRGLC+EGM A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480
Query: 481 IFSVMEEN-NYKPDTENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGI 540
+ S+MEE+ N KP +N+N++I G CK RRTDLA+EVFE MV K +PNETTY LVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540
Query: 541 VHEKQTDLATKVLRELQLKDVISQSTVERLVMQYDLN 564
HE + +LA +VL EL+L+ VI Q+ V+R+VMQ++L+
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576
BLAST of CmoCh01G013560 vs. Swiss-Prot
Match:
PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 382.9 bits (982), Expect = 6.2e-105
Identity = 191/487 (39.22%), Postives = 299/487 (61.40%), Query Frame = 1
Query: 71 QKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVMEMMIGSGIIP 130
Q R L + F LE +V G PD+ T L+ C+ K R+A K++E++ GSG +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 131 DASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTHSLQLL 190
D +Y ++S CK G + A+ ++D+M + VTYN+++R LC G L ++++L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 230
Query: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSYNVLLTGLCKE 250
DR++Q+ P+ TY+ L+EA ++ G A+KLLDE+ +G P++V+YNVL+ G+CKE
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290
Query: 251 GRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRAPSAVTY 310
GR D+AI+ ++PS G PNV+++NI+LRS+C GRW +A LLA+M +PS VT+
Sbjct: 291 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 350
Query: 311 NTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDLVVKCLDQMIY 370
N LI L G A+++LE+M + +P + SYNP++ C++KK+D ++ L++M+
Sbjct: 351 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 410
Query: 371 RHCNPNEGTYNAIAT-LCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITSLCRKGNTYS 430
R C P+ TYN + T LC+ G V++A IL L +K Y +VI L + G T
Sbjct: 411 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 470
Query: 431 AFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIF 490
A +LL EM PD+ YSSL+ GL EG +DEAI+ F E +P+ +NS++
Sbjct: 471 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 530
Query: 491 GCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLRELQLKDVIS 550
G CKSR+TD A++ M+N+G PNET+YT L+EG+ +E A ++L EL K ++
Sbjct: 531 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 590
Query: 551 QSTVERL 557
+S+ E++
Sbjct: 591 KSSAEQV 594
BLAST of CmoCh01G013560 vs. Swiss-Prot
Match:
PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 335.9 bits (860), Expect = 8.7e-91
Identity = 176/479 (36.74%), Postives = 272/479 (56.78%), Query Frame = 1
Query: 85 LEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVMEMMIGSGIIPDASSYTFLVSSLCK 144
LE +V KG PDV T+L+ + +A++VME++ G PD +Y L++ CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 171
Query: 145 RGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTHSLQLLDRLIQKGLVPNAYT 204
+ A +++D+M + +TVTYN ++ LC G L +L++L++L+ P T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231
Query: 205 YSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDDAIQLFRELP 264
Y+ L+EA E G DEA+KL+DE++++G KP++ +YN ++ G+CKEG D A ++ R L
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291
Query: 265 SKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRAPSAVTYNTLIGSLAFHGRTE 324
KG P+V+SYNILLR+L +G+WEE L+ +M + P+ VTY+ LI +L G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351
Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDLVVKCLDQMIYRHCNPNEGTYNAI- 384
A+ +L+ M P A SY+P+IA CR+ ++D+ ++ L+ MI C P+ YN +
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411
Query: 385 ATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITSLCRKGNTYSAFQLLYEMTKYGFT 444
ATLC+ G +A I LG Y ++ ++L G+ A ++ EM G
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471
Query: 445 PDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIFGCCKSRRTDLALEV 504
PD Y+S+I LC EGM+DEA E+ M + P YN ++ G CK+ R + A+ V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531
Query: 505 FESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLRELQLKDVISQSTVERLVMQYDL 563
ESMV G PNETTYT L+EGI A ++ +L D IS+ + +RL + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589
BLAST of CmoCh01G013560 vs. Swiss-Prot
Match:
PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)
HSP 1 Score: 259.2 bits (661), Expect = 1.0e-67
Identity = 134/454 (29.52%), Postives = 237/454 (52.20%), Query Frame = 1
Query: 91 KGQKPDVFQATQLLYDLCKASKLRRAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGY 150
KG +++ + ++ C+ KL A M +I G PD +++ L++ LC G V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTHSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ +T N+LV GLC++G ++ ++ L+DR+++ G PN TY +L+
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 211 AAYKERGADEAVKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDDAIQLFRELPSKGFNP 270
K A++LL ++ + K + V Y++++ GLCK+G D+A LF E+ KGF
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 271 NVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRAPSAVTYNTLIGSLAFHGRTEHALEVL 330
+++ Y L+R CY GRW++ LL +M P V ++ LI G+ A E+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 331 EEMIRARFKPTASSYNPIIARLCRDKKVDLVVKCLDQMIYRHCNPNEGTYNAIAT-LCEV 390
+EMI+ P +Y +I C++ ++D LD M+ + C PN T+N + C+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 391 GMVQEAFSILQSLGNKQHYSTQEFYKSVITSLCRKGNTYSAFQLLYEMTKYGFTPDSFAY 450
++ + + + + + + Y ++I C G A +L EM PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 451 SSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIFGCCKSRRTDLALEVFESMVN 510
L+ GLC G ++A+EIF +E++ + D YN +I G C + + D A ++F S+
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 511 KGYLPNETTYTTLVEGIVHEKQTDLATKVLRELQ 544
KG P+ TY ++ G+ + A + R+++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
BLAST of CmoCh01G013560 vs. Swiss-Prot
Match:
PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1)
HSP 1 Score: 254.6 bits (649), Expect = 2.5e-66
Identity = 131/442 (29.64%), Postives = 241/442 (54.52%), Query Frame = 1
Query: 103 LLYDLCKASKLRRAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYG 162
L+ C+ S++ A+ ++ M+ G P + + L++ C + A+ LVD+M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 163 YPTNTVTYNSLVRGLCMHGNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAV 222
Y +T+T+ +L+ GL +H + ++ L+DR++Q+G PN TY ++ K D A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 223 KLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSL 282
LL+++ A + ++V +N ++ LCK DDA+ LF+E+ +KG PNVV+Y+ L+ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 283 CYEGRWEEANVLLAEMDGDDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTA 342
C GRW +A+ LL++M P+ VT+N LI + G+ A ++ ++MI+ P
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 343 SSYNPIIARLCRDKKVDLVVKCLDQMIYRHCNPNEGTYNA-IATLCEVGMVQEAFSILQS 402
+YN ++ C ++D + + M+ + C P+ TYN I C+ V++ + +
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 403 LGNKQHYSTQEFYKSVITSLCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGM 462
+ ++ Y ++I L G+ +A ++ +M G PD YS L+ GLC G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 463 LDEAIEIFSVMEENNYKPDTENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTT 522
L++A+E+F M+++ K D Y ++I G CK+ + D ++F S+ KG PN TY T
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 523 LVEGIVHEKQTDLATKVLRELQ 544
++ G+ ++ A +L++++
Sbjct: 546 MISGLCSKRLLQEAYALLKKMK 567
BLAST of CmoCh01G013560 vs. TrEMBL
Match:
A0A0A0L2W8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G613170 PE=4 SV=1)
HSP 1 Score: 1025.8 bits (2651), Expect = 2.0e-296
Identity = 507/567 (89.42%), Postives = 538/567 (94.89%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MATLLNTVSPITNPSPETTRRG GFFSHIPN+ KLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNW+IGK DQK++E RLNDAF +LE++V KGQKPDVFQATQLLYDLCK K+R+AIKVM
Sbjct: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDA+SYTFLVSSLC++GNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DA+QLFRELPSKGF+PNVVSYNILLRSLC EGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
D+R+PS VTYN LIGSL HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCE GMVQEAFSI+QSLGNKQH+STQEFYK VITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGML+EAIEIFSVMEE N K D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
TENYNSLI GCCKSRRTDLAL+VFE MV KGYL NETTYT LVEGI+HEK+ DLAT+VLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNELPL 568
ELQL+DVI+QSTVERLVMQYDLNELPL
Sbjct: 541 ELQLRDVINQSTVERLVMQYDLNELPL 566
BLAST of CmoCh01G013560 vs. TrEMBL
Match:
E5GBB3_CUCME (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo PE=4 SV=1)
HSP 1 Score: 1024.6 bits (2648), Expect = 4.5e-296
Identity = 508/567 (89.59%), Postives = 538/567 (94.89%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MATLLNTVSPITN SPETTRRG GFFSHIPNL KLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNW+ GK +QK++E RL DAF +LE++V KGQKPDVFQATQLLYDLCKA K+R+AIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLC++GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DAI+LFRELPSKGF+PNVVSYNILLRSLC EGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
D+R+PS VTYN LIGSLA HGRTEHALEVLEEMIRARFKPTASSYNPIIA LC+D K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCE GMVQEAFSI+QSLGNKQH STQEFYK VITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGML+EAIEIFSVMEENN KPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
TENYNSLI GCCKSRRTDLAL+VFE MV KGYLPNETTYT LVEGI+HEK+ DLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNELPL 568
ELQL+DVISQST+ERLVMQYDLNELPL
Sbjct: 541 ELQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of CmoCh01G013560 vs. TrEMBL
Match:
A0A061FH66_THECC (Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_032450 PE=4 SV=1)
HSP 1 Score: 904.0 bits (2335), Expect = 8.9e-260
Identity = 429/565 (75.93%), Postives = 508/565 (89.91%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MATLLN++SP+TNPSPETTR+ GFF IPNLH SL+KGF++VLA+TQ+TISPKD++FT
Sbjct: 1 MATLLNSMSPMTNPSPETTRKTCGFFYQIPNLHSFSLNKGFTRVLATTQITISPKDSVFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNW+ GK D K+RE RLNDAF ++EY+VGKGQKPDV QATQLLYDLCKA+K++++I+V+
Sbjct: 61 LPNWKTGKNDTKSRELRLNDAFFHMEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVL 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMM+ SGIIPDA+SYTFLV+ LCKRGNVG+AMQLV+KME +GYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMVNSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNL SLQLLD+LIQ+GLVPNA+TYSFLLEAAYKE+G +EA+KLLD+IIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDKLIQRGLVPNAFTYSFLLEAAYKEKGVNEAMKLLDDIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTD+AI+ FR LP+KGF+PNVVSYNILLR+LCYEG+W+EAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRNLPAKGFDPNVVSYNILLRNLCYEGQWKEANELLAEMDG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
+DR+PS VTYN LIGSLA HGRTEHAL+VL+EMIR RFK TA+SYNPIIARLC++KKVDL
Sbjct: 301 EDRSPSVVTYNILIGSLALHGRTEHALDVLDEMIRGRFKATATSYNPIIARLCQEKKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQMIYR C PNEGTYNA A LCE GMVQEAFSI+QSLG+KQ + +FYKSVI+S
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNATAVLCEQGMVQEAFSIIQSLGSKQSSPSHDFYKSVISS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTK GF PDS+ YSSLIRGLC+EGML EA+EI VMEE+NY+PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKSGFNPDSYTYSSLIRGLCLEGMLQEALEIVIVMEESNYRPD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
+N+N+LI G CKS RTDL+L+VFE ++ KGY+PNETTYT LVEGI HE + +LA +VL+
Sbjct: 481 VDNFNALILGFCKSHRTDLSLKVFEMIIEKGYMPNETTYTILVEGIAHEGKIELAAEVLK 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNEL 566
EL +++V+SQ VERLVMQY+L+ +
Sbjct: 541 ELHVREVVSQHAVERLVMQYNLSAI 565
BLAST of CmoCh01G013560 vs. TrEMBL
Match:
A0A0D2U0G5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G354800 PE=4 SV=1)
HSP 1 Score: 897.1 bits (2317), Expect = 1.1e-257
Identity = 428/565 (75.75%), Postives = 503/565 (89.03%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MATL+N++S +TNPSPETTRR GFF I NLH SLSKGFSKVLA+TQ+TISPKD++FT
Sbjct: 1 MATLINSISFLTNPSPETTRRPSGFFYQIANLHYFSLSKGFSKVLATTQITISPKDSVFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNW+ GK D K+RE RL+DA+ ++EY+VGKGQKPDV QATQLLYDLCK +K++++I+VM
Sbjct: 61 LPNWKTGKSDSKSRELRLSDAYFHMEYMVGKGQKPDVVQATQLLYDLCKVNKMKKSIRVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMM+ SGIIPDA+SYTFLV+ LCKRGNVG+AMQLV+KME +GYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMVDSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNL SLQLLDRLIQKGLVPN +TYSFLLEAAYKE+G +EA KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLKQSLQLLDRLIQKGLVPNEFTYSFLLEAAYKEKGVNEATKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTD+AI+ FR+LP+KGFNPNVVSYNI+LR+LCYEGRW+EAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRDLPAKGFNPNVVSYNIVLRNLCYEGRWKEANELLAEMDG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
DDR+PS VTYN LIGSLA HGRT HA++VL+EMIR RFK +A+SYNPIIA+LC+++KVDL
Sbjct: 301 DDRSPSVVTYNILIGSLALHGRTYHAMDVLDEMIRGRFKVSATSYNPIIAQLCQEEKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQMIYR C PNEGTYNAIA LCE GMVQEAFSI QSL +KQ S +FYKSVI+S
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNAIAVLCEQGMVQEAFSIFQSLASKQSSSPNDFYKSVISS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTK GFTPDS+ YSSLIRGLC+EGML A++IF VMEE+N+KPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKSGFTPDSYTYSSLIRGLCLEGMLQAAMQIFIVMEESNFKPD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
+N+N+LI G CKS RTDL+L+VFE ++ KGY+PNETTYT LVEGI HE Q +LA +VL+
Sbjct: 481 VDNFNALILGFCKSHRTDLSLKVFEMLIEKGYMPNETTYTILVEGIAHEGQMELAAQVLK 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNEL 566
EL +++V+SQ VERL+MQY+L+ +
Sbjct: 541 ELHMREVVSQHVVERLIMQYNLSAI 565
BLAST of CmoCh01G013560 vs. TrEMBL
Match:
A5AJ76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00450 PE=4 SV=1)
HSP 1 Score: 892.1 bits (2304), Expect = 3.5e-256
Identity = 424/567 (74.78%), Postives = 499/567 (88.01%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MA L+N +SPIT+PSPE R+ GFFS +PNLH LSL+KGFS+VLASTQ+TISPKD +FT
Sbjct: 1 MAILVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNWR GK D + R+ RLNDAFL LEY++GKG KPD QATQL+Y+LCK++K+R+A KVM
Sbjct: 61 LPNWRSGKNDPRTRDLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
E+MIGSG PD +S TFLV++LCKRGNVGYAMQLV+KMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 ELMIGSGTTPDPASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNL+ SLQ+LD+ ++KGLVPN +TYSFLLEAAYKERGADEA++LLDEI+AKGGKPNLVSY
Sbjct: 181 GNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT++A+Q FR+LPSKGF+PNVVSYNILLRSLCYEGRWE+A LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
+R+PS VT+N LIGSLA HG+T+ ALEVL++M RARFK TA+SYNPIIARLC++ KVDL
Sbjct: 301 GERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQM+YR CNPNEGTYNAIA LCE G VQEAFSI+QSLGNKQ+ ST +FYK VI+S
Sbjct: 361 VVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGF PDS+ YSSLIRGLC EGMLDEA+EIFS+MEEN +PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
+N+N+LI G CK R+TDL+L VFE MV KGY+PNETTYT +VEGI H+++ +LA VL+
Sbjct: 481 VDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLK 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNELPL 568
EL L+ + +ST+ERLVMQYDL LP+
Sbjct: 541 ELYLRQAVGRSTLERLVMQYDLEGLPI 567
BLAST of CmoCh01G013560 vs. TAIR10
Match:
AT1G79080.1 (AT1G79080.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 754.6 bits (1947), Expect = 4.4e-218
Identity = 381/577 (66.03%), Postives = 470/577 (81.46%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPN--LHKLSLSKGFSKVLASTQVTISPKDTI 60
M+TLLN+V + +P + R+ GF SHIP+ LH S+SKG ++VLASTQ+T+SPKD+
Sbjct: 1 MSTLLNSVLSMASPE-SSPRKAVGFVSHIPSGFLHFSSVSKGVARVLASTQITLSPKDSA 60
Query: 61 FTLP--NWR--IGKG----DQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKA 120
FT+ +W+ + G D ++ E L+D+F +LE LV G KP+V +TQLLYDLCKA
Sbjct: 61 FTITGSSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKA 120
Query: 121 SKLRRAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTY 180
++L++AI+V+E+M+ SGIIPDAS+YT+LV+ LCKRGNVGYAMQLV+KME++GYP+NTVTY
Sbjct: 121 NRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTY 180
Query: 181 NSLVRGLCMHGNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIA 240
N+LVRGLCM G+L SLQ ++RL+QKGL PNA+TYSFLLEAAYKERG DEAVKLLDEII
Sbjct: 181 NALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 240
Query: 241 KGGKPNLVSYNVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEE 300
KGG+PNLVSYNVLLTG CKEGRTDDA+ LFRELP+KGF NVVSYNILLR LC +GRWEE
Sbjct: 241 KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEE 300
Query: 301 ANVLLAEMDGDDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRA--RFKPTASSYNPI 360
AN LLAEMDG DRAPS VTYN LI SLAFHGRTE AL+VL+EM + +F+ TA+SYNP+
Sbjct: 301 ANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV 360
Query: 361 IARLCRDKKVDLVVKCLDQMIYRHCNPNEGTYNAIATLCE-VGMVQEAFSILQSLGNKQH 420
IARLC++ KVDLVVKCLD+MIYR C PNEGTYNAI +LCE VQEAF I+QSL NKQ
Sbjct: 361 IARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQK 420
Query: 421 YSTQEFYKSVITSLCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIE 480
T +FYKSVITSLCRKGNT++AFQLLYEMT+ GF PD+ YS+LIRGLC+EGM A+E
Sbjct: 421 CCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAME 480
Query: 481 IFSVMEEN-NYKPDTENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGI 540
+ S+MEE+ N KP +N+N++I G CK RRTDLA+EVFE MV K +PNETTY LVEGI
Sbjct: 481 VLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGI 540
Query: 541 VHEKQTDLATKVLRELQLKDVISQSTVERLVMQYDLN 564
HE + +LA +VL EL+L+ VI Q+ V+R+VMQ++L+
Sbjct: 541 AHEDELELAKEVLDELRLRKVIGQNAVDRIVMQFNLD 576
BLAST of CmoCh01G013560 vs. TAIR10
Match:
AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 382.9 bits (982), Expect = 3.5e-106
Identity = 191/487 (39.22%), Postives = 299/487 (61.40%), Query Frame = 1
Query: 71 QKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVMEMMIGSGIIP 130
Q R L + F LE +V G PD+ T L+ C+ K R+A K++E++ GSG +P
Sbjct: 111 QMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVP 170
Query: 131 DASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTHSLQLL 190
D +Y ++S CK G + A+ ++D+M + VTYN+++R LC G L ++++L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 230
Query: 191 DRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSYNVLLTGLCKE 250
DR++Q+ P+ TY+ L+EA ++ G A+KLLDE+ +G P++V+YNVL+ G+CKE
Sbjct: 231 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 290
Query: 251 GRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRAPSAVTY 310
GR D+AI+ ++PS G PNV+++NI+LRS+C GRW +A LLA+M +PS VT+
Sbjct: 291 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 350
Query: 311 NTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDLVVKCLDQMIY 370
N LI L G A+++LE+M + +P + SYNP++ C++KK+D ++ L++M+
Sbjct: 351 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 410
Query: 371 RHCNPNEGTYNAIAT-LCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITSLCRKGNTYS 430
R C P+ TYN + T LC+ G V++A IL L +K Y +VI L + G T
Sbjct: 411 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 470
Query: 431 AFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIF 490
A +LL EM PD+ YSSL+ GL EG +DEAI+ F E +P+ +NS++
Sbjct: 471 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 530
Query: 491 GCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLRELQLKDVIS 550
G CKSR+TD A++ M+N+G PNET+YT L+EG+ +E A ++L EL K ++
Sbjct: 531 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMK 590
Query: 551 QSTVERL 557
+S+ E++
Sbjct: 591 KSSAEQV 594
BLAST of CmoCh01G013560 vs. TAIR10
Match:
AT3G04760.1 (AT3G04760.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 335.9 bits (860), Expect = 4.9e-92
Identity = 176/479 (36.74%), Postives = 272/479 (56.78%), Query Frame = 1
Query: 85 LEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVMEMMIGSGIIPDASSYTFLVSSLCK 144
LE +V KG PDV T+L+ + +A++VME++ G PD +Y L++ CK
Sbjct: 112 LETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVFAYNALINGFCK 171
Query: 145 RGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTHSLQLLDRLIQKGLVPNAYT 204
+ A +++D+M + +TVTYN ++ LC G L +L++L++L+ P T
Sbjct: 172 MNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVIT 231
Query: 205 YSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDDAIQLFRELP 264
Y+ L+EA E G DEA+KL+DE++++G KP++ +YN ++ G+CKEG D A ++ R L
Sbjct: 232 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE 291
Query: 265 SKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRAPSAVTYNTLIGSLAFHGRTE 324
KG P+V+SYNILLR+L +G+WEE L+ +M + P+ VTY+ LI +L G+ E
Sbjct: 292 LKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIE 351
Query: 325 HALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDLVVKCLDQMIYRHCNPNEGTYNAI- 384
A+ +L+ M P A SY+P+IA CR+ ++D+ ++ L+ MI C P+ YN +
Sbjct: 352 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVL 411
Query: 385 ATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITSLCRKGNTYSAFQLLYEMTKYGFT 444
ATLC+ G +A I LG Y ++ ++L G+ A ++ EM G
Sbjct: 412 ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGID 471
Query: 445 PDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIFGCCKSRRTDLALEV 504
PD Y+S+I LC EGM+DEA E+ M + P YN ++ G CK+ R + A+ V
Sbjct: 472 PDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV 531
Query: 505 FESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLRELQLKDVISQSTVERLVMQYDL 563
ESMV G PNETTYT L+EGI A ++ +L D IS+ + +RL + L
Sbjct: 532 LESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTFPL 589
BLAST of CmoCh01G013560 vs. TAIR10
Match:
AT1G12620.1 (AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 259.2 bits (661), Expect = 5.8e-69
Identity = 134/454 (29.52%), Postives = 237/454 (52.20%), Query Frame = 1
Query: 91 KGQKPDVFQATQLLYDLCKASKLRRAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGY 150
KG +++ + ++ C+ KL A M +I G PD +++ L++ LC G V
Sbjct: 101 KGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE 160
Query: 151 AMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTHSLQLLDRLIQKGLVPNAYTYSFLLE 210
A++LVD+M E G+ +T N+LV GLC++G ++ ++ L+DR+++ G PN TY +L+
Sbjct: 161 ALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 211 AAYKERGADEAVKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDDAIQLFRELPSKGFNP 270
K A++LL ++ + K + V Y++++ GLCK+G D+A LF E+ KGF
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 271 NVVSYNILLRSLCYEGRWEEANVLLAEMDGDDRAPSAVTYNTLIGSLAFHGRTEHALEVL 330
+++ Y L+R CY GRW++ LL +M P V ++ LI G+ A E+
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 331 EEMIRARFKPTASSYNPIIARLCRDKKVDLVVKCLDQMIYRHCNPNEGTYNAIAT-LCEV 390
+EMI+ P +Y +I C++ ++D LD M+ + C PN T+N + C+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 391 GMVQEAFSILQSLGNKQHYSTQEFYKSVITSLCRKGNTYSAFQLLYEMTKYGFTPDSFAY 450
++ + + + + + + Y ++I C G A +L EM PD +Y
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 451 SSLIRGLCMEGMLDEAIEIFSVMEENNYKPDTENYNSLIFGCCKSRRTDLALEVFESMVN 510
L+ GLC G ++A+EIF +E++ + D YN +I G C + + D A ++F S+
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 511 KGYLPNETTYTTLVEGIVHEKQTDLATKVLRELQ 544
KG P+ TY ++ G+ + A + R+++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554
BLAST of CmoCh01G013560 vs. TAIR10
Match:
AT1G62590.1 (AT1G62590.1 pentatricopeptide (PPR) repeat-containing protein)
HSP 1 Score: 254.6 bits (649), Expect = 1.4e-67
Identity = 131/442 (29.64%), Postives = 241/442 (54.52%), Query Frame = 1
Query: 103 LLYDLCKASKLRRAIKVMEMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYG 162
L+ C+ S++ A+ ++ M+ G P + + L++ C + A+ LVD+M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 163 YPTNTVTYNSLVRGLCMHGNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAV 222
Y +T+T+ +L+ GL +H + ++ L+DR++Q+G PN TY ++ K D A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 223 KLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSL 282
LL+++ A + ++V +N ++ LCK DDA+ LF+E+ +KG PNVV+Y+ L+ L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 283 CYEGRWEEANVLLAEMDGDDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTA 342
C GRW +A+ LL++M P+ VT+N LI + G+ A ++ ++MI+ P
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 343 SSYNPIIARLCRDKKVDLVVKCLDQMIYRHCNPNEGTYNA-IATLCEVGMVQEAFSILQS 402
+YN ++ C ++D + + M+ + C P+ TYN I C+ V++ + +
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 403 LGNKQHYSTQEFYKSVITSLCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGM 462
+ ++ Y ++I L G+ +A ++ +M G PD YS L+ GLC G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 463 LDEAIEIFSVMEENNYKPDTENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTT 522
L++A+E+F M+++ K D Y ++I G CK+ + D ++F S+ KG PN TY T
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 523 LVEGIVHEKQTDLATKVLRELQ 544
++ G+ ++ A +L++++
Sbjct: 546 MISGLCSKRLLQEAYALLKKMK 567
BLAST of CmoCh01G013560 vs. NCBI nr
Match:
gi|778695367|ref|XP_011653982.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis sativus])
HSP 1 Score: 1025.8 bits (2651), Expect = 2.9e-296
Identity = 507/567 (89.42%), Postives = 538/567 (94.89%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MATLLNTVSPITNPSPETTRRG GFFSHIPN+ KLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNW+IGK DQK++E RLNDAF +LE++V KGQKPDVFQATQLLYDLCK K+R+AIKVM
Sbjct: 61 LPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDA+SYTFLVSSLC++GNVGYAMQLVDKMEEYGYPTNT TYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DA+QLFRELPSKGF+PNVVSYNILLRSLC EGRWEEANVLLAEMDG
Sbjct: 241 NVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
D+R+PS VTYN LIGSL HGRTEHALEVLEEMIRARFKPTASSYNPIIARLC+D+KVDL
Sbjct: 301 DERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCE GMVQEAFSI+QSLGNKQH+STQEFYK VITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGML+EAIEIFSVMEE N K D
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE-NIKLD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
TENYNSLI GCCKSRRTDLAL+VFE MV KGYL NETTYT LVEGI+HEK+ DLAT+VLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLR 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNELPL 568
ELQL+DVI+QSTVERLVMQYDLNELPL
Sbjct: 541 ELQLRDVINQSTVERLVMQYDLNELPL 566
BLAST of CmoCh01G013560 vs. NCBI nr
Match:
gi|659087133|ref|XP_008444287.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Cucumis melo])
HSP 1 Score: 1024.6 bits (2648), Expect = 6.5e-296
Identity = 508/567 (89.59%), Postives = 538/567 (94.89%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MATLLNTVSPITN SPETTRRG GFFSHIPNL KLSL+KGFSKVLASTQ+TISPKDTIFT
Sbjct: 1 MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNW+ GK +QK++E RL DAF +LE++V KGQKPDVFQATQLLYDLCKA K+R+AIKVM
Sbjct: 61 LPNWKTGKVEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMMIGSGIIPDASSYTFLVSSLC++GNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNLT SLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA KLLDEIIAKGG+PNLVSY
Sbjct: 181 GNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRT+DAI+LFRELPSKGF+PNVVSYNILLRSLC EGRWEEANVLLAEM+G
Sbjct: 241 NVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
D+R+PS VTYN LIGSLA HGRTEHALEVLEEMIRARFKPTASSYNPIIA LC+D K+DL
Sbjct: 301 DERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQM+YRHCNPNEGTYNAIATLCE GMVQEAFSI+QSLGNKQH STQEFYK VITS
Sbjct: 361 VVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTKYGFTPDSF YSSLIRGLCMEGML+EAIEIFSVMEENN KPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
TENYNSLI GCCKSRRTDLAL+VFE MV KGYLPNETTYT LVEGI+HEK+ DLATKVLR
Sbjct: 481 TENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLR 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNELPL 568
ELQL+DVISQST+ERLVMQYDLNELPL
Sbjct: 541 ELQLRDVISQSTLERLVMQYDLNELPL 566
BLAST of CmoCh01G013560 vs. NCBI nr
Match:
gi|590612064|ref|XP_007022279.1| (Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao])
HSP 1 Score: 904.0 bits (2335), Expect = 1.3e-259
Identity = 429/565 (75.93%), Postives = 508/565 (89.91%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MATLLN++SP+TNPSPETTR+ GFF IPNLH SL+KGF++VLA+TQ+TISPKD++FT
Sbjct: 1 MATLLNSMSPMTNPSPETTRKTCGFFYQIPNLHSFSLNKGFTRVLATTQITISPKDSVFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNW+ GK D K+RE RLNDAF ++EY+VGKGQKPDV QATQLLYDLCKA+K++++I+V+
Sbjct: 61 LPNWKTGKNDTKSRELRLNDAFFHMEYMVGKGQKPDVAQATQLLYDLCKANKMKKSIRVL 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMM+ SGIIPDA+SYTFLV+ LCKRGNVG+AMQLV+KME +GYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMVNSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNL SLQLLD+LIQ+GLVPNA+TYSFLLEAAYKE+G +EA+KLLD+IIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDKLIQRGLVPNAFTYSFLLEAAYKEKGVNEAMKLLDDIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTD+AI+ FR LP+KGF+PNVVSYNILLR+LCYEG+W+EAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRNLPAKGFDPNVVSYNILLRNLCYEGQWKEANELLAEMDG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
+DR+PS VTYN LIGSLA HGRTEHAL+VL+EMIR RFK TA+SYNPIIARLC++KKVDL
Sbjct: 301 EDRSPSVVTYNILIGSLALHGRTEHALDVLDEMIRGRFKATATSYNPIIARLCQEKKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQMIYR C PNEGTYNA A LCE GMVQEAFSI+QSLG+KQ + +FYKSVI+S
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNATAVLCEQGMVQEAFSIIQSLGSKQSSPSHDFYKSVISS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTK GF PDS+ YSSLIRGLC+EGML EA+EI VMEE+NY+PD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKSGFNPDSYTYSSLIRGLCLEGMLQEALEIVIVMEESNYRPD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
+N+N+LI G CKS RTDL+L+VFE ++ KGY+PNETTYT LVEGI HE + +LA +VL+
Sbjct: 481 VDNFNALILGFCKSHRTDLSLKVFEMIIEKGYMPNETTYTILVEGIAHEGKIELAAEVLK 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNEL 566
EL +++V+SQ VERLVMQY+L+ +
Sbjct: 541 ELHVREVVSQHAVERLVMQYNLSAI 565
BLAST of CmoCh01G013560 vs. NCBI nr
Match:
gi|645239785|ref|XP_008226294.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Prunus mume])
HSP 1 Score: 899.4 bits (2323), Expect = 3.1e-258
Identity = 429/567 (75.66%), Postives = 504/567 (88.89%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MA L+N+VSPI +PSPE+TR FFSHI NL L+LSKGFS+VLA+TQ+TISPKDT+FT
Sbjct: 1 MAVLVNSVSPIAHPSPESTRNSCRFFSHIRNLQPLTLSKGFSRVLATTQITISPKDTVFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNWR K ++++RE RL DAFL+LE +VGKGQKPDV QATQLLYDLCKA+K+R+A++V+
Sbjct: 61 LPNWRAAKNNRRSREVRLIDAFLHLESMVGKGQKPDVAQATQLLYDLCKANKMRKAVRVI 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMM+ +GIIPDA+SYTFLV+ LCKRGN+GYAMQLV+KMEEYGYPTNT+TYNSLVRGLC+
Sbjct: 121 EMMVSAGIIPDAASYTFLVNYLCKRGNIGYAMQLVEKMEEYGYPTNTITYNSLVRGLCVR 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNL SLQLLDRLIQKGLVPN YTYSFLLEAAYKERG +EA+KLL EIIAKGGKPNLVSY
Sbjct: 181 GNLNQSLQLLDRLIQKGLVPNVYTYSFLLEAAYKERGVNEAMKLLQEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTD+A++ FR LPS GF+PNVVSYNI+LRSLCYEGRWEEAN LL+EM+G
Sbjct: 241 NVLLTGLCKEGRTDEALRFFRNLPSMGFDPNVVSYNIVLRSLCYEGRWEEANELLSEMEG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
+DR+PS VTYN LIGSLA HGRTEHALEVL+EM+R +FKP+A+SYNPIIA LC+++KVD
Sbjct: 301 EDRSPSIVTYNILIGSLALHGRTEHALEVLDEMVRGQFKPSAASYNPIIAHLCKERKVDS 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
V+KCLDQMI+R CNPNEGT+NAIA LCE GMVQEAFSI+ SL NKQ ST EFYK+VITS
Sbjct: 361 VIKCLDQMIHRRCNPNEGTFNAIAVLCEEGMVQEAFSIIHSLANKQKCSTNEFYKNVITS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNT+ AFQ+LYEMTK GFTPDS+ YSSLIRGLC+EGMLDEA+EIF VMEENN +PD
Sbjct: 421 LCRKGNTFPAFQILYEMTKRGFTPDSYTYSSLIRGLCLEGMLDEAMEIFKVMEENNIRPD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
T+N+N+L+ G CKSRRTDL+L+VFE M+ KG +PNE TYT LVEGI HE + +LA KVL+
Sbjct: 481 TDNFNALVLGFCKSRRTDLSLQVFEMMIKKGRMPNEMTYTILVEGIAHEGELELAAKVLK 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNELPL 568
EL L+ V+S +TVERLVMQYD +LP+
Sbjct: 541 ELHLRHVMSPNTVERLVMQYDFEDLPV 567
BLAST of CmoCh01G013560 vs. NCBI nr
Match:
gi|823216753|ref|XP_012441071.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Gossypium raimondii])
HSP 1 Score: 897.1 bits (2317), Expect = 1.6e-257
Identity = 428/565 (75.75%), Postives = 503/565 (89.03%), Query Frame = 1
Query: 1 MATLLNTVSPITNPSPETTRRGYGFFSHIPNLHKLSLSKGFSKVLASTQVTISPKDTIFT 60
MATL+N++S +TNPSPETTRR GFF I NLH SLSKGFSKVLA+TQ+TISPKD++FT
Sbjct: 1 MATLINSISFLTNPSPETTRRPSGFFYQIANLHYFSLSKGFSKVLATTQITISPKDSVFT 60
Query: 61 LPNWRIGKGDQKNREHRLNDAFLNLEYLVGKGQKPDVFQATQLLYDLCKASKLRRAIKVM 120
LPNW+ GK D K+RE RL+DA+ ++EY+VGKGQKPDV QATQLLYDLCK +K++++I+VM
Sbjct: 61 LPNWKTGKSDSKSRELRLSDAYFHMEYMVGKGQKPDVVQATQLLYDLCKVNKMKKSIRVM 120
Query: 121 EMMIGSGIIPDASSYTFLVSSLCKRGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMH 180
EMM+ SGIIPDA+SYTFLV+ LCKRGNVG+AMQLV+KME +GYPTNTVTYNSLVRGLCMH
Sbjct: 121 EMMVDSGIIPDAASYTFLVNHLCKRGNVGHAMQLVEKMEAHGYPTNTVTYNSLVRGLCMH 180
Query: 181 GNLTHSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEAVKLLDEIIAKGGKPNLVSY 240
GNL SLQLLDRLIQKGLVPN +TYSFLLEAAYKE+G +EA KLLDEIIAKGGKPNLVSY
Sbjct: 181 GNLKQSLQLLDRLIQKGLVPNEFTYSFLLEAAYKEKGVNEATKLLDEIIAKGGKPNLVSY 240
Query: 241 NVLLTGLCKEGRTDDAIQLFRELPSKGFNPNVVSYNILLRSLCYEGRWEEANVLLAEMDG 300
NVLLTGLCKEGRTD+AI+ FR+LP+KGFNPNVVSYNI+LR+LCYEGRW+EAN LLAEMDG
Sbjct: 241 NVLLTGLCKEGRTDEAIRFFRDLPAKGFNPNVVSYNIVLRNLCYEGRWKEANELLAEMDG 300
Query: 301 DDRAPSAVTYNTLIGSLAFHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCRDKKVDL 360
DDR+PS VTYN LIGSLA HGRT HA++VL+EMIR RFK +A+SYNPIIA+LC+++KVDL
Sbjct: 301 DDRSPSVVTYNILIGSLALHGRTYHAMDVLDEMIRGRFKVSATSYNPIIAQLCQEEKVDL 360
Query: 361 VVKCLDQMIYRHCNPNEGTYNAIATLCEVGMVQEAFSILQSLGNKQHYSTQEFYKSVITS 420
VVKCLDQMIYR C PNEGTYNAIA LCE GMVQEAFSI QSL +KQ S +FYKSVI+S
Sbjct: 361 VVKCLDQMIYRRCKPNEGTYNAIAVLCEQGMVQEAFSIFQSLASKQSSSPNDFYKSVISS 420
Query: 421 LCRKGNTYSAFQLLYEMTKYGFTPDSFAYSSLIRGLCMEGMLDEAIEIFSVMEENNYKPD 480
LCRKGNTY AFQLLYEMTK GFTPDS+ YSSLIRGLC+EGML A++IF VMEE+N+KPD
Sbjct: 421 LCRKGNTYPAFQLLYEMTKSGFTPDSYTYSSLIRGLCLEGMLQAAMQIFIVMEESNFKPD 480
Query: 481 TENYNSLIFGCCKSRRTDLALEVFESMVNKGYLPNETTYTTLVEGIVHEKQTDLATKVLR 540
+N+N+LI G CKS RTDL+L+VFE ++ KGY+PNETTYT LVEGI HE Q +LA +VL+
Sbjct: 481 VDNFNALILGFCKSHRTDLSLKVFEMLIEKGYMPNETTYTILVEGIAHEGQMELAAQVLK 540
Query: 541 ELQLKDVISQSTVERLVMQYDLNEL 566
EL +++V+SQ VERL+MQY+L+ +
Sbjct: 541 ELHMREVVSQHVVERLIMQYNLSAI 565
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| PP131_ARATH | 7.8e-217 | 66.03 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
| PPR28_ARATH | 6.2e-105 | 39.22 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... | [more] |
| PP213_ARATH | 8.7e-91 | 36.74 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
| PPR37_ARATH | 1.0e-67 | 29.52 | Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN... | [more] |
| PPR90_ARATH | 2.5e-66 | 29.64 | Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L2W8_CUCSA | 2.0e-296 | 89.42 | Uncharacterized protein OS=Cucumis sativus GN=Csa_4G613170 PE=4 SV=1 | [more] |
| E5GBB3_CUCME | 4.5e-296 | 89.59 | Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo PE=4 SV=... | [more] |
| A0A061FH66_THECC | 8.9e-260 | 75.93 | Pentatricopeptide repeat (PPR) superfamily protein OS=Theobroma cacao GN=TCM_032... | [more] |
| A0A0D2U0G5_GOSRA | 1.1e-257 | 75.75 | Uncharacterized protein OS=Gossypium raimondii GN=B456_009G354800 PE=4 SV=1 | [more] |
| A5AJ76_VITVI | 3.5e-256 | 74.78 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00450 PE=4 SV=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G79080.1 | 4.4e-218 | 66.03 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G09900.1 | 3.5e-106 | 39.22 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT3G04760.1 | 4.9e-92 | 36.74 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT1G12620.1 | 5.8e-69 | 29.52 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G62590.1 | 1.4e-67 | 29.64 | pentatricopeptide (PPR) repeat-containing protein | [more] |
