Cp4.1LG05g05270 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g05270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtease inhibitor/seed storage/lipid transfer protein family protein
LocationCp4.1LG05 : 3135461 .. 3136528 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGGTAACGAGTGGTCACAATAAGTGCTAAACCAATCACTACCACCCACTCTCTTTAATTCCCATTCACCATAAAAACCCACTGCCCCTTCTCCCCGCCCACTCCGCCCAATTCCCAGTGCCACCGCTCCCTCCAAAGCAATCATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACACTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGGTAATTGATTCGTTCGTGATTCATATGTCGTATCATTATTAATGTAATCTGTGTGACGTTAATTGTTGGAGTATGTGAACTACAGGGCTTCTCCATCTGCCGCCCAACTCCGCAGAAGCCAAGGATTTTTTGGGGCTAAGCGCCAAGGGAGCAAACGTTACATCTGCTCCCACGGGTAATGATACTTATTAATTTCTTTTAGAGTAAGAACAGTAATTAGATGTATTTCTATTTGATCTTGACATTAATTAATCGTTAACGTACGCTAATTAGTCTAACAAAACATGTTTTAATTTGTTGCAGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAGTGTACCATTTTTAGTTCTCCCAAACTCTCCATAAATAAAATAAATATTTAATTAATTAATCATGTGATAACGGGATTATTATCGATATAGTCCATATTGGTCGCTCGTTTTTTTGATATTGTTATAGAATAAATGTTTTTTAATTTTATCAAAAAATTTGAAGA

mRNA sequence

TGAAGGTAACGAGTGGTCACAATAAGTGCTAAACCAATCACTACCACCCACTCTCTTTAATTCCCATTCACCATAAAAACCCACTGCCCCTTCTCCCCGCCCACTCCGCCCAATTCCCAGTGCCACCGCTCCCTCCAAAGCAATCATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACACTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAGTGTACCATTTTTAGTTCTCCCAAACTCTCCATAAATAAAATAAATATTTAATTAATTAATCATGTGATAACGGGATTATTATCGATATAGTCCATATTGGTCGCTCGTTTTTTTGATATTGTTATAGAATAAATGTTTTTTAATTTTATCAAAAAATTTGAAGA

Coding sequence (CDS)

ATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACACTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAG

Protein sequence

MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSIW
Homology
[Close]
BLAST of Cp4.1LG05g05270 vs. Swiss-Prot
Match: YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-30
Identity = 60/107 (56.07%), Postives = 84/107 (78.50%), Query Frame = 1 

Query: 12  MSCALALLFLGLVT----SNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLV 71
           M+ A+AL+ + +V     ++  +D+ ECT Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V
Sbjct: 9   MATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQV 68

Query: 72  VQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIA 115
           +   MKCLC++I++RNDP LGL+VN++LAL LP+VCH  A+IT C A
Sbjct: 69  INSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPA 115

[Close]
BLAST of Cp4.1LG05g05270 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-06
Identity = 27/74 (36.49%), Postives = 38/74 (51.35%), Query Frame = 1 

Query: 34  ECTDQVVGLATCLPYV----GGEAKAPTPDCCSGLRLVVQKSMKCLCVLIKDRNDPTLGL 93
           +C   ++ +  CL YV    GG A  P   CC  L  +V+ S +CLC L+       LG+
Sbjct: 37  DCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGI 96

Query: 94  KVNLTLALGLPNVC 104
           K++   AL LP VC
Sbjct: 97  KIDKAKALKLPGVC 110

[Close]
BLAST of Cp4.1LG05g05270 vs. TrEMBL
Match: A0A0A0KZ48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280560 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-46
Identity = 102/184 (55.43%), Postives = 121/184 (65.76%), Query Frame = 1 

Query: 5   SPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGL 64
           +PS+   +  ALALL +G V+SN+DQDRAEC DQVVGLATCLPYVGGEAKAPTPDCCSGL
Sbjct: 2   APSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGL 61

Query: 65  RLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI----------- 124
           +LV+ KS KCLCVLIKDR+DP+LGLKVNL+LALGLP+ CH PANI DC+           
Sbjct: 62  KLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPE 121

Query: 125 -----------------------ASSNPTEKPDVKNDGGMRKQRMGVEIFISCIV---LF 152
                                   S + ++  +VKNDG  R Q +GVE+FI  I    LF
Sbjct: 122 AKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLF 181

[Close]
BLAST of Cp4.1LG05g05270 vs. TrEMBL
Match: I7J3I4_9ROSA (T4.9 protein OS=Malus x robusta GN=T4.9 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-36
Identity = 78/125 (62.40%), Postives = 97/125 (77.60%), Query Frame = 1 

Query: 3   SKSPSTNLAMSCALALLFL-GLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCC 62
           SK+ S  + +SC L L+FL G  + N+DQD+AEC DQ+VGLA CLPYVGG+AK+PT DCC
Sbjct: 4   SKNVSVQV-LSCTLVLIFLVGFGSCNIDQDKAECADQLVGLAPCLPYVGGDAKSPTIDCC 63

Query: 63  SGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSN-PTE 122
           SG+++VVQKS KCLCVLIKDR+DP LGLK+N TLAL LP+ CH P NI+ C+   N P+ 
Sbjct: 64  SGIKVVVQKSKKCLCVLIKDRDDPKLGLKINATLALNLPSSCHVPINISRCVDLLNLPSN 123

Query: 123 KPDVK 126
            PD K
Sbjct: 124 SPDAK 127

[Close]
BLAST of Cp4.1LG05g05270 vs. TrEMBL
Match: A0A151QZQ6_CAJCA (Putative GPI-anchored protein At1g27950 family OS=Cajanus cajan GN=KK1_043248 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36
Identity = 68/105 (64.76%), Postives = 88/105 (83.81%), Query Frame = 1 

Query: 9   NLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 68
           NLA+S A+ LLFLG  TS+++QD+AECTD+++GLA CLPY   ++K PTPDCCSGL++V+
Sbjct: 6   NLALSLAMFLLFLGFATSDINQDKAECTDKLLGLAGCLPYATSQSKVPTPDCCSGLKVVI 65

Query: 69  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI 114
            KS +CLC+LI DR+DP LG+K+N+TLAL LP VCHTP NIT CI
Sbjct: 66  DKSKRCLCILINDRDDPNLGIKINVTLALNLPTVCHTPTNITQCI 110

[Close]
BLAST of Cp4.1LG05g05270 vs. TrEMBL
Match: A0A0B2SUN2_GLYSO (Putative GPI-anchored protein OS=Glycine soja GN=glysoja_015427 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35
Identity = 69/105 (65.71%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 9   NLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 68
           NLA+S AL LL +G  TS+++QD+AECTD+++GLA CL YVGGEAK PT DCCSG++ V+
Sbjct: 8   NLALSSALLLLLVGFATSDINQDKAECTDKLLGLAGCLSYVGGEAKVPTMDCCSGIKEVI 67

Query: 69  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI 114
            KS +CLC+LIKDR+DP+LGLK+N+TLAL LP+VC TP NIT C+
Sbjct: 68  DKSKRCLCILIKDRDDPSLGLKINVTLALNLPDVCETPTNITQCV 112

[Close]
BLAST of Cp4.1LG05g05270 vs. TrEMBL
Match: C6SVG8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G112300 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35
Identity = 69/105 (65.71%), Postives = 89/105 (84.76%), Query Frame = 1 

Query: 9   NLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 68
           NLA+S AL LL +G  TS+++QD+AECTD+++GLA CL YVGGEAK PT DCCSG++ V+
Sbjct: 8   NLALSSALLLLLVGFATSDINQDKAECTDKLLGLAGCLSYVGGEAKVPTMDCCSGIKEVI 67

Query: 69  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI 114
            KS +CLC+LIKDR+DP+LGLK+N+TLAL LP+VC TP NIT C+
Sbjct: 68  NKSKRCLCILIKDRDDPSLGLKINVTLALNLPDVCETPTNITQCV 112

[Close]
BLAST of Cp4.1LG05g05270 vs. TAIR10
Match: AT2G44300.1 (AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 1.5e-32
Identity = 60/106 (56.60%), Postives = 85/106 (80.19%), Query Frame = 1 

Query: 12  MSCALALLFLGLVTSNVD---QDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 71
           M+ A+AL+ + +V +  D   +D+ ECT+Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V+
Sbjct: 9   MATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVL 68

Query: 72  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIA 115
             + KCLCV+I+DRNDP LGL++N++LAL LP+VCH  A++T C A
Sbjct: 69  NSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPA 114

[Close]
BLAST of Cp4.1LG05g05270 vs. TAIR10
Match: AT2G44290.1 (AT2G44290.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-31
Identity = 60/107 (56.07%), Postives = 84/107 (78.50%), Query Frame = 1 

Query: 12  MSCALALLFLGLVT----SNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLV 71
           M+ A+AL+ + +V     ++  +D+ ECT Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V
Sbjct: 9   MATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQV 68

Query: 72  VQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIA 115
           +   MKCLC++I++RNDP LGL+VN++LAL LP+VCH  A+IT C A
Sbjct: 69  INSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPA 115

[Close]
BLAST of Cp4.1LG05g05270 vs. TAIR10
Match: AT1G55260.1 (AT1G55260.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 3.7e-31
Identity = 69/180 (38.33%), Postives = 104/180 (57.78%), Query Frame = 1 

Query: 2   TSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCC 61
           T +  +  L ++  +  + LG   S++ QDR ECT+Q++ L+TC+PYVGG+AKAPT DCC
Sbjct: 43  TMEKSTRTLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCC 102

Query: 62  SGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCH-TPANITDCIA------ 121
           +G   V++KS KC+C+L++D++DP LG+K+N TLA  LP+ CH T  NITDCI+      
Sbjct: 103 AGFGQVIRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPR 162

Query: 122 -------------------SSNPTE----------KPDVKNDGGMRKQRMGVEIFISCIV 146
                              S++PT+             VK++G   K  +GVE+ I  +V
Sbjct: 163 NSTLAKEFENLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLIYLLV 222

[Close]
BLAST of Cp4.1LG05g05270 vs. TAIR10
Match: AT3G58550.1 (AT3G58550.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 2.4e-22
Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 1 

Query: 10  LAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 69
           LA+   +A++FLG V S + QD   C D +  L +CLP+V  +AKAP   CCS L++ + 
Sbjct: 14  LALCITVAVMFLG-VRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKID 73

Query: 70  KSM--KCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDC 113
           K    KCLC L+KDR+DP LG KV+   A+ LP+ CH PANI+ C
Sbjct: 74  KGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQC 117

[Close]
BLAST of Cp4.1LG05g05270 vs. TAIR10
Match: AT1G73890.1 (AT1G73890.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 7.8e-13
Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 1 

Query: 10  LAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 69
           + +  +L+  FL +V + V    A C  +++ LA C P+V G A+ P   CC  L  +  
Sbjct: 8   ITLLISLSAFFLRMVLAQVP---ATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYS 67

Query: 70  KSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSNPTEKP 123
           +   CLC+ + + +  +    +N TLAL LP +C+ PAN + C +SS P E P
Sbjct: 68  QEATCLCLFLNNTSTLSPAFPINQTLALQLPPLCNIPANSSTC-SSSFPGEAP 116

[Close]
BLAST of Cp4.1LG05g05270 vs. NCBI nr
Match: gi|778692985|ref|XP_011653558.1| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 3.9e-46
Identity = 102/184 (55.43%), Postives = 121/184 (65.76%), Query Frame = 1 

Query: 5   SPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGL 64
           +PS+   +  ALALL +G V+SN+DQDRAEC DQVVGLATCLPYVGGEAKAPTPDCCSGL
Sbjct: 2   APSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGL 61

Query: 65  RLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI----------- 124
           +LV+ KS KCLCVLIKDR+DP+LGLKVNL+LALGLP+ CH PANI DC+           
Sbjct: 62  KLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPE 121

Query: 125 -----------------------ASSNPTEKPDVKNDGGMRKQRMGVEIFISCIV---LF 152
                                   S + ++  +VKNDG  R Q +GVE+FI  I    LF
Sbjct: 122 AKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLF 181

[Close]
BLAST of Cp4.1LG05g05270 vs. NCBI nr
Match: gi|659097759|ref|XP_008449799.1| (PREDICTED: protein YLS3 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-44
Identity = 103/185 (55.68%), Postives = 120/185 (64.86%), Query Frame = 1 

Query: 5   SPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGL 64
           +PS+   +  ALALL +G V+SN+DQDRAEC DQVVGLATCLPYVGGEAKAPTPDCCSGL
Sbjct: 2   APSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGL 61

Query: 65  RLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI----------- 124
           +LV+ KS KCLCVLIKDR+DP+LGLKVNLTLALGLP+ CH PA+I DCI           
Sbjct: 62  KLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPE 121

Query: 125 -----------------------ASSNPTEKPDVKNDGGMR-KQRMGVEI---FISCIVL 152
                                   S N ++  +VKN G  R  Q +GVEI   FI+   L
Sbjct: 122 AKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSFL 181

[Close]
BLAST of Cp4.1LG05g05270 vs. NCBI nr
Match: gi|694374350|ref|XP_009364110.1| (PREDICTED: protein YLS3-like [Pyrus x bretschneideri])

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-37
Identity = 77/117 (65.81%), Postives = 93/117 (79.49%), Query Frame = 1 

Query: 11  AMSCALALLFL-GLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 70
           A++CAL L+FL G  + N+DQDRAECTDQ+VGLA C+PYVGG+AK PT DCCSG++ VVQ
Sbjct: 11  ALTCALVLIFLVGFGSCNIDQDRAECTDQLVGLAPCIPYVGGDAKTPTLDCCSGIKEVVQ 70

Query: 71  KSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSN-PTEKPDVK 126
           KS KCLC+LIKDR+DP LGLK+N TLAL LP+ CH P NI+ CI   N P+  PD K
Sbjct: 71  KSKKCLCILIKDRDDPKLGLKINSTLALNLPSSCHVPVNISTCIDLLNLPSNSPDAK 127

[Close]
BLAST of Cp4.1LG05g05270 vs. NCBI nr
Match: gi|694315391|ref|XP_009375461.1| (PREDICTED: protein YLS3-like [Pyrus x bretschneideri])

HSP 1 Score: 161.8 bits (408), Expect = 9.5e-37
Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 1 

Query: 11  AMSCALALLFL-GLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 70
           A+SC L L+FL G  + N+DQD+AEC DQ+VGLA CLPYVGG+AK+PT DCCSG+++VVQ
Sbjct: 11  ALSCTLLLIFLVGFGSCNIDQDKAECADQLVGLAPCLPYVGGDAKSPTIDCCSGIKVVVQ 70

Query: 71  KSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSN-PTEKPDVK 126
           KS KCLCVLIKDR+DP LGLK+N TLAL LP+ CH P NI+ C+   N P+  PD K
Sbjct: 71  KSKKCLCVLIKDRDDPKLGLKINATLALNLPSSCHVPINISRCVDLLNLPSNSPDAK 127

[Close]
BLAST of Cp4.1LG05g05270 vs. NCBI nr
Match: gi|400131570|emb|CCH50970.1| (T4.9 [Malus x robusta])

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-36
Identity = 78/125 (62.40%), Postives = 97/125 (77.60%), Query Frame = 1 

Query: 3   SKSPSTNLAMSCALALLFL-GLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCC 62
           SK+ S  + +SC L L+FL G  + N+DQD+AEC DQ+VGLA CLPYVGG+AK+PT DCC
Sbjct: 4   SKNVSVQV-LSCTLVLIFLVGFGSCNIDQDKAECADQLVGLAPCLPYVGGDAKSPTIDCC 63

Query: 63  SGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSN-PTE 122
           SG+++VVQKS KCLCVLIKDR+DP LGLK+N TLAL LP+ CH P NI+ C+   N P+ 
Sbjct: 64  SGIKVVVQKSKKCLCVLIKDRDDPKLGLKINATLALNLPSSCHVPINISRCVDLLNLPSN 123

Query: 123 KPDVK 126
            PD K
Sbjct: 124 SPDAK 127

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g05270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YLS3_ARATH3.0e-3056.07Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1[more]
LTPG2_ARATH3.9e-0636.49Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LT... [more]
BLAST of Cp4.1LG05g05270 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ48_CUCSA2.7e-4655.43Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280560 PE=4 SV=1[more]
I7J3I4_9ROSA1.5e-3662.40T4.9 protein OS=Malus x robusta GN=T4.9 PE=3 SV=1[more]
A0A151QZQ6_CAJCA3.3e-3664.76Putative GPI-anchored protein At1g27950 family OS=Cajanus cajan GN=KK1_043248 PE... [more]
A0A0B2SUN2_GLYSO1.3e-3565.71Putative GPI-anchored protein OS=Glycine soja GN=glysoja_015427 PE=4 SV=1[more]
C6SVG8_SOYBN1.3e-3565.71Uncharacterized protein OS=Glycine max GN=GLYMA_08G112300 PE=2 SV=1[more]
BLAST of Cp4.1LG05g05270 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44300.11.5e-3256.60 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G44290.11.7e-3156.07 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G55260.13.7e-3138.33 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT3G58550.12.4e-2247.62 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G73890.17.8e-1333.63 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Cp4.1LG05g05270 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778692985|ref|XP_011653558.1|3.9e-4655.43PREDICTED: protein YLS3 [Cucumis sativus][more]
gi|659097759|ref|XP_008449799.1|1.2e-4455.68PREDICTED: protein YLS3 [Cucumis melo][more]
gi|694374350|ref|XP_009364110.1|3.3e-3765.81PREDICTED: protein YLS3-like [Pyrus x bretschneideri][more]
gi|694315391|ref|XP_009375461.1|9.5e-3764.96PREDICTED: protein YLS3-like [Pyrus x bretschneideri][more]
gi|400131570|emb|CCH50970.1|2.1e-3662.40T4.9 [Malus x robusta][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006869 lipid transport
biological_process GO:0071840 cellular component organization or biogenesis
biological_process GO:0071554 cell wall organization or biogenesis
biological_process GO:0044699 single-organism process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005773 vacuole
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0008289 lipid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g05270.1Cp4.1LG05g05270.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 25..112
score: 4.7
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 35..112
score: 3.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 34..112
score: 6.03
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 34..110
score: 3.1
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 2..113
score: 2.3
NoneNo IPR availablePANTHERPTHR33044:SF28BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEINcoord: 2..113
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g05270Cucsa.142800Cucumber (Gy14) v1cgycpeB0386
Cp4.1LG05g05270Cucsa.153260Cucumber (Gy14) v1cgycpeB0410
Cp4.1LG05g05270CmaCh10G009700Cucurbita maxima (Rimu)cmacpeB098
Cp4.1LG05g05270CmaCh20G000380Cucurbita maxima (Rimu)cmacpeB586
Cp4.1LG05g05270CmaCh02G012080Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g05270CmoCh10G010220Cucurbita moschata (Rifu)cmocpeB074
Cp4.1LG05g05270CmoCh02G012420Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g05270CmoCh20G000390Cucurbita moschata (Rifu)cmocpeB535
Cp4.1LG05g05270Cla003174Watermelon (97103) v1cpewmB723
Cp4.1LG05g05270Csa4G280560Cucumber (Chinese Long) v2cpecuB728
Cp4.1LG05g05270Csa1G602030Cucumber (Chinese Long) v2cpecuB703
Cp4.1LG05g05270Csa7G430130Cucumber (Chinese Long) v2cpecuB768
Cp4.1LG05g05270MELO3C014672Melon (DHL92) v3.5.1cpemeB696
Cp4.1LG05g05270ClCG02G023920Watermelon (Charleston Gray)cpewcgB644
Cp4.1LG05g05270CSPI04G13080Wild cucumber (PI 183967)cpecpiB730
Cp4.1LG05g05270CSPI01G29730Wild cucumber (PI 183967)cpecpiB705
Cp4.1LG05g05270Lsi10G009760Bottle gourd (USVL1VR-Ls)cpelsiB598
Cp4.1LG05g05270MELO3C014672.2Melon (DHL92) v3.6.1cpemedB829
Cp4.1LG05g05270MELO3C023502.2Melon (DHL92) v3.6.1cpemedB813
Cp4.1LG05g05270CsaV3_7G031530Cucumber (Chinese Long) v3cpecucB0948
Cp4.1LG05g05270CsaV3_1G042180Cucumber (Chinese Long) v3cpecucB0877
Cp4.1LG05g05270CsaV3_4G023430Cucumber (Chinese Long) v3cpecucB0908
Cp4.1LG05g05270Bhi09G000475Wax gourdcpewgoB0970
Cp4.1LG05g05270Bhi10G000340Wax gourdcpewgoB0944
Cp4.1LG05g05270CsGy7G018020Cucumber (Gy14) v2cgybcpeB975
Cp4.1LG05g05270CsGy4G012650Cucumber (Gy14) v2cgybcpeB561
Cp4.1LG05g05270CsGy1G029070Cucumber (Gy14) v2cgybcpeB137
Cp4.1LG05g05270Carg06943Silver-seed gourdcarcpeB0741
Cp4.1LG05g05270Carg16971Silver-seed gourdcarcpeB0658
Cp4.1LG05g05270Carg02749Silver-seed gourdcarcpeB1283
Cp4.1LG05g05270Carg13478Silver-seed gourdcarcpeB0635
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g05270Cp4.1LG16g09240Cucurbita pepo (Zucchini)cpecpeB310
Cp4.1LG05g05270Cp4.1LG17g08370Cucurbita pepo (Zucchini)cpecpeB341
Cp4.1LG05g05270Cp4.1LG18g01320Cucurbita pepo (Zucchini)cpecpeB369
The following block(s) are covering this gene:

None