Cp4.1LG05g05270.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG05g05270.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protease inhibitor/seed storage/lipid transfer protein family protein
Location	Cp4.1LG05 : 3135461 .. 3136528 (+)
Sequence length	765

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAGGTAACGAGTGGTCACAATAAGTGCTAAACCAATCACTACCACCCACTCTCTTTAATTCCCATTCACCATAAAAACCCACTGCCCCTTCTCCCCGCCCACTCCGCCCAATTCCCAGTGCCACCGCTCCCTCCAAAGCAATCATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACACTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGGTAATTGATTCGTTCGTGATTCATATGTCGTATCATTATTAATGTAATCTGTGTGACGTTAATTGTTGGAGTATGTGAACTACAGGGCTTCTCCATCTGCCGCCCAACTCCGCAGAAGCCAAGGATTTTTTGGGGCTAAGCGCCAAGGGAGCAAACGTTACATCTGCTCCCACGGGTAATGATACTTATTAATTTCTTTTAGAGTAAGAACAGTAATTAGATGTATTTCTATTTGATCTTGACATTAATTAATCGTTAACGTACGCTAATTAGTCTAACAAAACATGTTTTAATTTGTTGCAGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAGTGTACCATTTTTAGTTCTCCCAAACTCTCCATAAATAAAATAAATATTTAATTAATTAATCATGTGATAACGGGATTATTATCGATATAGTCCATATTGGTCGCTCGTTTTTTTGATATTGTTATAGAATAAATGTTTTTTAATTTTATCAAAAAATTTGAAGA

mRNA sequence

TGAAGGTAACGAGTGGTCACAATAAGTGCTAAACCAATCACTACCACCCACTCTCTTTAATTCCCATTCACCATAAAAACCCACTGCCCCTTCTCCCCGCCCACTCCGCCCAATTCCCAGTGCCACCGCTCCCTCCAAAGCAATCATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACACTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAGTGTACCATTTTTAGTTCTCCCAAACTCTCCATAAATAAAATAAATATTTAATTAATTAATCATGTGATAACGGGATTATTATCGATATAGTCCATATTGGTCGCTCGTTTTTTTGATATTGTTATAGAATAAATGTTTTTTAATTTTATCAAAAAATTTGAAGA

Coding sequence (CDS)

ATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACACTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAG

Protein sequence

MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSIW

Homology

[Close]

BLAST of Cp4.1LG05g05270.1 vs. Swiss-Prot
Match: YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-30
Identity = 60/107 (56.07%), Postives = 84/107 (78.50%), Query Frame = 1


Query: 12  MSCALALLFLGLVT----SNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLV 71
           M+ A+AL+ + +V     ++  +D+ ECT Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V
Sbjct: 9   MATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQV 68

Query: 72  VQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIA 115
           +   MKCLC++I++RNDP LGL+VN++LAL LP+VCH  A+IT C A
Sbjct: 69  INSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPA 115

[Close]

BLAST of Cp4.1LG05g05270.1 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-06
Identity = 27/74 (36.49%), Postives = 38/74 (51.35%), Query Frame = 1


Query: 34  ECTDQVVGLATCLPYV----GGEAKAPTPDCCSGLRLVVQKSMKCLCVLIKDRNDPTLGL 93
           +C   ++ +  CL YV    GG A  P   CC  L  +V+ S +CLC L+       LG+
Sbjct: 37  DCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMAAQLGI 96

Query: 94  KVNLTLALGLPNVC 104
           K++   AL LP VC
Sbjct: 97  KIDKAKALKLPGVC 110

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TrEMBL
Match: A0A0A0KZ48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280560 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-46
Identity = 102/184 (55.43%), Postives = 121/184 (65.76%), Query Frame = 1


Query: 5   SPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGL 64
           +PS+   +  ALALL +G V+SN+DQDRAEC DQVVGLATCLPYVGGEAKAPTPDCCSGL
Sbjct: 2   APSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGL 61

Query: 65  RLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI----------- 124
           +LV+ KS KCLCVLIKDR+DP+LGLKVNL+LALGLP+ CH PANI DC+           
Sbjct: 62  KLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPE 121

Query: 125 -----------------------ASSNPTEKPDVKNDGGMRKQRMGVEIFISCIV---LF 152
                                   S + ++  +VKNDG  R Q +GVE+FI  I    LF
Sbjct: 122 AKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLF 181

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TrEMBL
Match: I7J3I4_9ROSA (T4.9 protein OS=Malus x robusta GN=T4.9 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-36
Identity = 78/125 (62.40%), Postives = 97/125 (77.60%), Query Frame = 1


Query: 3   SKSPSTNLAMSCALALLFL-GLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCC 62
           SK+ S  + +SC L L+FL G  + N+DQD+AEC DQ+VGLA CLPYVGG+AK+PT DCC
Sbjct: 4   SKNVSVQV-LSCTLVLIFLVGFGSCNIDQDKAECADQLVGLAPCLPYVGGDAKSPTIDCC 63

Query: 63  SGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSN-PTE 122
           SG+++VVQKS KCLCVLIKDR+DP LGLK+N TLAL LP+ CH P NI+ C+   N P+ 
Sbjct: 64  SGIKVVVQKSKKCLCVLIKDRDDPKLGLKINATLALNLPSSCHVPINISRCVDLLNLPSN 123

Query: 123 KPDVK 126
            PD K
Sbjct: 124 SPDAK 127

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TrEMBL
Match: A0A151QZQ6_CAJCA (Putative GPI-anchored protein At1g27950 family OS=Cajanus cajan GN=KK1_043248 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36
Identity = 68/105 (64.76%), Postives = 88/105 (83.81%), Query Frame = 1


Query: 9   NLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 68
           NLA+S A+ LLFLG  TS+++QD+AECTD+++GLA CLPY   ++K PTPDCCSGL++V+
Sbjct: 6   NLALSLAMFLLFLGFATSDINQDKAECTDKLLGLAGCLPYATSQSKVPTPDCCSGLKVVI 65

Query: 69  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI 114
            KS +CLC+LI DR+DP LG+K+N+TLAL LP VCHTP NIT CI
Sbjct: 66  DKSKRCLCILINDRDDPNLGIKINVTLALNLPTVCHTPTNITQCI 110

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TrEMBL
Match: A0A0B2SUN2_GLYSO (Putative GPI-anchored protein OS=Glycine soja GN=glysoja_015427 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35
Identity = 69/105 (65.71%), Postives = 89/105 (84.76%), Query Frame = 1


Query: 9   NLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 68
           NLA+S AL LL +G  TS+++QD+AECTD+++GLA CL YVGGEAK PT DCCSG++ V+
Sbjct: 8   NLALSSALLLLLVGFATSDINQDKAECTDKLLGLAGCLSYVGGEAKVPTMDCCSGIKEVI 67

Query: 69  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI 114
            KS +CLC+LIKDR+DP+LGLK+N+TLAL LP+VC TP NIT C+
Sbjct: 68  DKSKRCLCILIKDRDDPSLGLKINVTLALNLPDVCETPTNITQCV 112

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TrEMBL
Match: C6SVG8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G112300 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-35
Identity = 69/105 (65.71%), Postives = 89/105 (84.76%), Query Frame = 1


Query: 9   NLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 68
           NLA+S AL LL +G  TS+++QD+AECTD+++GLA CL YVGGEAK PT DCCSG++ V+
Sbjct: 8   NLALSSALLLLLVGFATSDINQDKAECTDKLLGLAGCLSYVGGEAKVPTMDCCSGIKEVI 67

Query: 69  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI 114
            KS +CLC+LIKDR+DP+LGLK+N+TLAL LP+VC TP NIT C+
Sbjct: 68  NKSKRCLCILIKDRDDPSLGLKINVTLALNLPDVCETPTNITQCV 112

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TAIR10
Match: AT2G44300.1 (AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 1.5e-32
Identity = 60/106 (56.60%), Postives = 85/106 (80.19%), Query Frame = 1


Query: 12  MSCALALLFLGLVTSNVD---QDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 71
           M+ A+AL+ + +V +  D   +D+ ECT+Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V+
Sbjct: 9   MATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVL 68

Query: 72  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIA 115
             + KCLCV+I+DRNDP LGL++N++LAL LP+VCH  A++T C A
Sbjct: 69  NSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPA 114

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TAIR10
Match: AT2G44290.1 (AT2G44290.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-31
Identity = 60/107 (56.07%), Postives = 84/107 (78.50%), Query Frame = 1


Query: 12  MSCALALLFLGLVT----SNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLV 71
           M+ A+AL+ + +V     ++  +D+ ECT Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V
Sbjct: 9   MATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQV 68

Query: 72  VQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIA 115
           +   MKCLC++I++RNDP LGL+VN++LAL LP+VCH  A+IT C A
Sbjct: 69  INSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPA 115

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TAIR10
Match: AT1G55260.1 (AT1G55260.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 3.7e-31
Identity = 69/180 (38.33%), Postives = 104/180 (57.78%), Query Frame = 1


Query: 2   TSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCC 61
           T +  +  L ++  +  + LG   S++ QDR ECT+Q++ L+TC+PYVGG+AKAPT DCC
Sbjct: 43  TMEKSTRTLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCC 102

Query: 62  SGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCH-TPANITDCIA------ 121
           +G   V++KS KC+C+L++D++DP LG+K+N TLA  LP+ CH T  NITDCI+      
Sbjct: 103 AGFGQVIRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPR 162

Query: 122 -------------------SSNPTE----------KPDVKNDGGMRKQRMGVEIFISCIV 146
                              S++PT+             VK++G   K  +GVE+ I  +V
Sbjct: 163 NSTLAKEFENLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLIYLLV 222

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TAIR10
Match: AT3G58550.1 (AT3G58550.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 2.4e-22
Identity = 50/105 (47.62%), Postives = 68/105 (64.76%), Query Frame = 1


Query: 10  LAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 69
           LA+   +A++FLG V S + QD   C D +  L +CLP+V  +AKAP   CCS L++ + 
Sbjct: 14  LALCITVAVMFLG-VRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKID 73

Query: 70  KSM--KCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDC 113
           K    KCLC L+KDR+DP LG KV+   A+ LP+ CH PANI+ C
Sbjct: 74  KGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQC 117

[Close]

BLAST of Cp4.1LG05g05270.1 vs. TAIR10
Match: AT1G73890.1 (AT1G73890.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 7.8e-13
Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 1


Query: 10  LAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 69
           + +  +L+  FL +V + V    A C  +++ LA C P+V G A+ P   CC  L  +  
Sbjct: 8   ITLLISLSAFFLRMVLAQVP---ATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYS 67

Query: 70  KSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSNPTEKP 123
           +   CLC+ + + +  +    +N TLAL LP +C+ PAN + C +SS P E P
Sbjct: 68  QEATCLCLFLNNTSTLSPAFPINQTLALQLPPLCNIPANSSTC-SSSFPGEAP 116

[Close]

BLAST of Cp4.1LG05g05270.1 vs. NCBI nr
Match: gi|778692985|ref|XP_011653558.1| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 3.9e-46
Identity = 102/184 (55.43%), Postives = 121/184 (65.76%), Query Frame = 1


Query: 5   SPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGL 64
           +PS+   +  ALALL +G V+SN+DQDRAEC DQVVGLATCLPYVGGEAKAPTPDCCSGL
Sbjct: 2   APSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGL 61

Query: 65  RLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI----------- 124
           +LV+ KS KCLCVLIKDR+DP+LGLKVNL+LALGLP+ CH PANI DC+           
Sbjct: 62  KLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPE 121

Query: 125 -----------------------ASSNPTEKPDVKNDGGMRKQRMGVEIFISCIV---LF 152
                                   S + ++  +VKNDG  R Q +GVE+FI  I    LF
Sbjct: 122 AKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLF 181

[Close]

BLAST of Cp4.1LG05g05270.1 vs. NCBI nr
Match: gi|659097759|ref|XP_008449799.1| (PREDICTED: protein YLS3 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-44
Identity = 103/185 (55.68%), Postives = 120/185 (64.86%), Query Frame = 1


Query: 5   SPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGL 64
           +PS+   +  ALALL +G V+SN+DQDRAEC DQVVGLATCLPYVGGEAKAPTPDCCSGL
Sbjct: 2   APSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGL 61

Query: 65  RLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCI----------- 124
           +LV+ KS KCLCVLIKDR+DP+LGLKVNLTLALGLP+ CH PA+I DCI           
Sbjct: 62  KLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPE 121

Query: 125 -----------------------ASSNPTEKPDVKNDGGMR-KQRMGVEI---FISCIVL 152
                                   S N ++  +VKN G  R  Q +GVEI   FI+   L
Sbjct: 122 AKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSFL 181

[Close]

BLAST of Cp4.1LG05g05270.1 vs. NCBI nr
Match: gi|694374350|ref|XP_009364110.1| (PREDICTED: protein YLS3-like [Pyrus x bretschneideri])

HSP 1 Score: 163.3 bits (412), Expect = 3.3e-37
Identity = 77/117 (65.81%), Postives = 93/117 (79.49%), Query Frame = 1


Query: 11  AMSCALALLFL-GLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 70
           A++CAL L+FL G  + N+DQDRAECTDQ+VGLA C+PYVGG+AK PT DCCSG++ VVQ
Sbjct: 11  ALTCALVLIFLVGFGSCNIDQDRAECTDQLVGLAPCIPYVGGDAKTPTLDCCSGIKEVVQ 70

Query: 71  KSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSN-PTEKPDVK 126
           KS KCLC+LIKDR+DP LGLK+N TLAL LP+ CH P NI+ CI   N P+  PD K
Sbjct: 71  KSKKCLCILIKDRDDPKLGLKINSTLALNLPSSCHVPVNISTCIDLLNLPSNSPDAK 127

[Close]

BLAST of Cp4.1LG05g05270.1 vs. NCBI nr
Match: gi|694315391|ref|XP_009375461.1| (PREDICTED: protein YLS3-like [Pyrus x bretschneideri])

HSP 1 Score: 161.8 bits (408), Expect = 9.5e-37
Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 1


Query: 11  AMSCALALLFL-GLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 70
           A+SC L L+FL G  + N+DQD+AEC DQ+VGLA CLPYVGG+AK+PT DCCSG+++VVQ
Sbjct: 11  ALSCTLLLIFLVGFGSCNIDQDKAECADQLVGLAPCLPYVGGDAKSPTIDCCSGIKVVVQ 70

Query: 71  KSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSN-PTEKPDVK 126
           KS KCLCVLIKDR+DP LGLK+N TLAL LP+ CH P NI+ C+   N P+  PD K
Sbjct: 71  KSKKCLCVLIKDRDDPKLGLKINATLALNLPSSCHVPINISRCVDLLNLPSNSPDAK 127

[Close]

BLAST of Cp4.1LG05g05270.1 vs. NCBI nr
Match: gi|400131570|emb|CCH50970.1| (T4.9 [Malus x robusta])

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-36
Identity = 78/125 (62.40%), Postives = 97/125 (77.60%), Query Frame = 1


Query: 3   SKSPSTNLAMSCALALLFL-GLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCC 62
           SK+ S  + +SC L L+FL G  + N+DQD+AEC DQ+VGLA CLPYVGG+AK+PT DCC
Sbjct: 4   SKNVSVQV-LSCTLVLIFLVGFGSCNIDQDKAECADQLVGLAPCLPYVGGDAKSPTIDCC 63

Query: 63  SGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIASSN-PTE 122
           SG+++VVQKS KCLCVLIKDR+DP LGLK+N TLAL LP+ CH P NI+ C+   N P+ 
Sbjct: 64  SGIKVVVQKSKKCLCVLIKDRDDPKLGLKINATLALNLPSSCHVPINISRCVDLLNLPSN 123

Query: 123 KPDVK 126
            PD K
Sbjct: 124 SPDAK 127

The following BLAST results are available for this feature:

BLAST of Cp4.1LG05g05270.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YLS3_ARATH	3.0e-30	56.07	Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1	[more]
LTPG2_ARATH	3.9e-06	36.49	Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LT...	[more]

BLAST of Cp4.1LG05g05270.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ48_CUCSA	2.7e-46	55.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280560 PE=4 SV=1	[more]
I7J3I4_9ROSA	1.5e-36	62.40	T4.9 protein OS=Malus x robusta GN=T4.9 PE=3 SV=1	[more]
A0A151QZQ6_CAJCA	3.3e-36	64.76	Putative GPI-anchored protein At1g27950 family OS=Cajanus cajan GN=KK1_043248 PE...	[more]
A0A0B2SUN2_GLYSO	1.3e-35	65.71	Putative GPI-anchored protein OS=Glycine soja GN=glysoja_015427 PE=4 SV=1	[more]
C6SVG8_SOYBN	1.3e-35	65.71	Uncharacterized protein OS=Glycine max GN=GLYMA_08G112300 PE=2 SV=1	[more]

BLAST of Cp4.1LG05g05270.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44300.1	1.5e-32	56.60	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G44290.1	1.7e-31	56.07	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G55260.1	3.7e-31	38.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G58550.1	2.4e-22	47.62	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G73890.1	7.8e-13	33.63	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Cp4.1LG05g05270.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778692985\|ref\|XP_011653558.1\|	3.9e-46	55.43	PREDICTED: protein YLS3 [Cucumis sativus]	[more]
gi\|659097759\|ref\|XP_008449799.1\|	1.2e-44	55.68	PREDICTED: protein YLS3 [Cucumis melo]	[more]
gi\|694374350\|ref\|XP_009364110.1\|	3.3e-37	65.81	PREDICTED: protein YLS3-like [Pyrus x bretschneideri]	[more]
gi\|694315391\|ref\|XP_009375461.1\|	9.5e-37	64.96	PREDICTED: protein YLS3-like [Pyrus x bretschneideri]	[more]
gi\|400131570\|emb\|CCH50970.1\|	2.1e-36	62.40	T4.9 [Malus x robusta]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG05g05270	Cp4.1LG05g05270	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG05g05270.1:five_prime_utr:001	Cp4.1LG05g05270.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG05g05270.1:cds:001	Cp4.1LG05g05270.1:cds:001	CDS
Cp4.1LG05g05270.1:cds:002	Cp4.1LG05g05270.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG05g05270.1:three_prime_utr:001	Cp4.1LG05g05270.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG05g05270.1	Cp4.1LG05g05270.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 25..112 score: 4.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 35..112 score: 3.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 34..112 score: 6.03
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 34..110 score: 3.1
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 2..113 score: 2.3
None	No IPR available	PANTHER	PTHR33044:SF28	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 2..113 score: 2.3