MELO3C014672 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014672
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Lipid transfer protein
Location	chr5 : 519465 .. 521009 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCTCATCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTGCTTTCTGTGGGGTTTGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGGCTCGCTACTTGCTTGCCATACGTTGGCGGCGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCCAGCCTTGGACTCAAAGTTAATCTTACCCTTGCTCTTGGTCTTCCTTCTGCTTGTCACGCCCCAGCAGACATCAAAGATTGCATCGGTATGTCTTCCTCTCAAGTTTAAGGTTTTAGGTCAATCGGTTATTTATTCATACCGAAAAAAATTAGGTTAAAAATAGATCTTCTTAAACTATCTAATTATAATTTGTTGTATAGCAAGTTTTTTTAATTCTTTTGATCATTTTGAAATATTTTAATTCATAAAACATAGATAGTATTGGACTTCATCCATTTTTGTTTCACTCATCAATTCTCTAATTAAAAATTAGATGAGATATATGGATATTAACATGGGTTTAATAGTATTTATAGCGTGAACATATAAAAATTAAAGTATTTTTCTATTTGTTGTACCTAATTATTTTCACGTTTATACTATAGGAGTTATAGTAATAAAGAAAAATTGAAATATTGACCTTTCTATTTATTGTACATCATGTTAACGTGTTTCTAAAAATAAGATGAGACCCACGAACATTAATATGAGAGGTCCATGAATGGCGTGAACATAGGAAGTATACGATCATACTCTTAGTATTGGAAAATTTCTCAATAAAAATAAATGCATCAGGAGAACTATGCATGCAATTAAGTATGTTTGGCCTTTTCATAATATATTTCTCTTAACTTTATTAATTGTTCAAAAGAAAATTATTGTTATCATTATTTTGTAATGGAGTATATATATGTGTGTGTGTGTGTGTGAATATAGGGCTTCTCCATTTGTCGCCAAACTCCCCAGAGGCTAAGGATTTCTTGGGTTCGTCCAACTCCAAGGAAACTAACACTTCTTCATCAGCACATGCTACTCCTGGTATTATAAAGCTCAAAACCCTTTTTCTAATTTCTCAACTACCAAAAACGAGTTAATTAGGGATCCGTTTGGATTAATTTGGGAAAACTTATCTTTTTCTAAACACTTCTAATAAAAATTGTTTGAAAATACACTTCAAAACTATTTTGAATAATGGTCGTCAGACATTCTACTAATCGTCTCTAAAATATCTTAATAAATGGATACCTTGGCTACAAGTACATGCATTGTGTGTATGTTGAAGATGCTACGATGAGTTAACACCATTTCTCGAAGTTAATGTAATTTTTTGTTTTGCGTAAAATTGTTGCAGTTAGTGGGAATTCTTCACAAAACACAGAAGTGAAGAATGGTGGAACGAAGAGGAATAATCAGTGGTTGGGTGTGGAGATACTCATTTGCTTTATTACTTCATCTTTTCTATTCACTTGTATTTGGTAG

mRNA sequence

ATGGCTCCCTCATCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTGCTTTCTGTGGGGTTTGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGGCTCGCTACTTGCTTGCCATACGTTGGCGGCGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCCAGCCTTGGACTCAAAGTTAATCTTACCCTTGCTCTTGGTCTTCCTTCTGCTTGTCACGCCCCAGCAGACATCAAAGATTGCATCGGGCTTCTCCATTTGTCGCCAAACTCCCCAGAGGCTAAGGATTTCTTGGGTTCGTCCAACTCCAAGGAAACTAACACTTCTTCATCAGCACATGCTACTCCTGTTAGTGGGAATTCTTCACAAAACACAGAAGTGAAGAATGGTGGAACGAAGAGGAATAATCAGTGGTTGGGTGTGGAGATACTCATTTGCTTTATTACTTCATCTTTTCTATTCACTTGTATTTGGTAG

Coding sequence (CDS)

ATGGCTCCCTCATCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTGCTTTCTGTGGGGTTTGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGGCTCGCTACTTGCTTGCCATACGTTGGCGGCGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCCAGCCTTGGACTCAAAGTTAATCTTACCCTTGCTCTTGGTCTTCCTTCTGCTTGTCACGCCCCAGCAGACATCAAAGATTGCATCGGGCTTCTCCATTTGTCGCCAAACTCCCCAGAGGCTAAGGATTTCTTGGGTTCGTCCAACTCCAAGGAAACTAACACTTCTTCATCAGCACATGCTACTCCTGTTAGTGGGAATTCTTCACAAAACACAGAAGTGAAGAATGGTGGAACGAAGAGGAATAATCAGTGGTTGGGTGTGGAGATACTCATTTGCTTTATTACTTCATCTTTTCTATTCACTTGTATTTGGTAG

Protein sequence

MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSFLFTCIW*

Homology

[Close]

BLAST of MELO3C014672 vs. Swiss-Prot
Match: YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-38
Identity = 86/194 (44.33%), Postives = 118/194 (60.82%), Query Frame = 1


Query: 12  ALALLSVGFV----SSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDK 71
           A+AL+ V  V     ++  +D+ EC  Q+VG+ATCLPYV G+AK+PTPDCCSGLK V++ 
Sbjct: 12  AIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINS 71

Query: 72  SRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDF-- 131
             KCLC++I++R+DP LGL+VN++LAL LPS CHA ADI  C  LLHL PNSP+A+ F  
Sbjct: 72  DMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQ 131

Query: 132 ----LGSSNSKETNTSSSAHATPVS--------GNSSQNTEV--KNGGTKRNNQWLGVEI 186
               L  + S    T S++  T +S         NS + T V   N     + QWLG+E+
Sbjct: 132 LAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLEV 191

[Close]

BLAST of MELO3C014672 vs. Swiss-Prot
Match: LTPG1_ARATH (Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LTPG1 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.7e-09
Identity = 40/157 (25.48%), Postives = 67/157 (42.68%), Query Frame = 1


Query: 31  ECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCLCVLIKDRDDPSLGLK--- 90
           EC      +  CL +  G+A  P+  CC  ++ + ++  KCLC +I+        LK   
Sbjct: 34  ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLG 93

Query: 91  VNLTLALGLPSACHA-PADIKDCIGLLHLSPNSPEAKDFLGSSNSKETNTSSSAHATPVS 150
           V     + LP++C    A I +C  LL +SP+SP+A  F  ++ +     +  + ATP +
Sbjct: 94  VQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATTTPVAPAGKSPATPAT 153

Query: 151 GNSSQNTEVKNGGTKRNNQWLGVEILICFITSSFLFT 184
                    K G     +    V + +  +  SF+ T
Sbjct: 154 STD------KGGSASAKDGHAVVALAVALMAVSFVLT 184

[Close]

BLAST of MELO3C014672 vs. TrEMBL
Match: A0A0A0KZ48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280560 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 7.3e-94
Identity = 173/186 (93.01%), Postives = 180/186 (96.77%), Query Frame = 1


Query: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60
           MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG
Sbjct: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60

Query: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSP 120
           LKLVLDKSRKCLCVLIKDRDDPSLGLKVNL+LALGLPSACHAPA+IKDC+GLLHLSPNSP
Sbjct: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP 120

Query: 121 EAKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSF 180
           EAKDFLGS NSKETNTS+ AHATPVSG+SSQN+EVKN GTKR NQWLGVE+ I FITSSF
Sbjct: 121 EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKR-NQWLGVEMFIWFITSSF 180

Query: 181 LFTCIW 187
           LFTCIW
Sbjct: 181 LFTCIW 185

[Close]

BLAST of MELO3C014672 vs. TrEMBL
Match: V7D2S1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G268300g PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47
Identity = 95/153 (62.09%), Postives = 119/153 (77.78%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L LL VGF +S++ +DR ECAD++VGLA+C+PYVGGEAK PT DCCSGLK+VLDKS+KC+
Sbjct: 33  LLLLLVGFANSDLGKDREECADKLVGLASCVPYVGGEAKTPTIDCCSGLKVVLDKSKKCI 92

Query: 73  CVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFLGSSNSK 132
           C+LIKDRDDP+LG+K+N TLA+ LPSACHAPA+I  C+ LLHL+PNSP+AK F G  NS 
Sbjct: 93  CILIKDRDDPNLGIKINATLAIQLPSACHAPANISHCVDLLHLAPNSPDAKVFEGFQNSA 152

Query: 133 ETNTS---SSAHATPVSGNSSQNTEVKNGGTKR 163
           +TN+S   SSA      G++S   E     TKR
Sbjct: 153 KTNSSTPVSSAAGGAEKGSNSSGQEKSGVSTKR 185

[Close]

BLAST of MELO3C014672 vs. TrEMBL
Match: A0A067FA15_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029705mg PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.6e-46
Identity = 97/174 (55.75%), Postives = 126/174 (72.41%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L L+ +G  SSNIDQD+AECAD+VV LATCLPYVGG+AK PT DCC GLK +LDKS+KCL
Sbjct: 15  LVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCL 74

Query: 73  CVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFLGSSNSK 132
           C+LIKD+DDPSLGLK+N TLA  LP+ACH+PA++ +CI LLHL PNSP+AK F G SN  
Sbjct: 75  CLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLT 134

Query: 133 ETNTSSSAHAT-PVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSFLFTCI 186
           + +  + A A    S N S + + K+ G K  ++ LG+E+ +   +  FL   +
Sbjct: 135 QGHGGTPATAVGSNSKNGSPSADQKSDGGKA-SRLLGLEMAVWGFSLHFLLVTL 187

[Close]

BLAST of MELO3C014672 vs. TrEMBL
Match: V4U4P0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016842mg PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.6e-46
Identity = 97/174 (55.75%), Postives = 126/174 (72.41%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L L+ +G  SSNIDQD+AECAD+VV LATCLPYVGG+AK PT DCC GLK +LDKS+KCL
Sbjct: 15  LVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCL 74

Query: 73  CVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFLGSSNSK 132
           C+LIKD+DDPSLGLK+N TLA  LP+ACH+PA++ +CI LLHL PNSP+AK F G SN  
Sbjct: 75  CLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLT 134

Query: 133 ETNTSSSAHAT-PVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSFLFTCI 186
           + +  + A A    S N S + + K+ G K  ++ LG+E+ +   +  FL   +
Sbjct: 135 QGHGGTPATAVGSNSKNGSPSADQKSDGGKA-SRLLGLEMAVWGFSLHFLLVTL 187

[Close]

BLAST of MELO3C014672 vs. TrEMBL
Match: A0A059D932_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03623 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.3e-46
Identity = 103/179 (57.54%), Postives = 131/179 (73.18%), Query Frame = 1


Query: 11  AALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRK 70
           AA A++  G   S++DQDRAECADQ+VGLA+CLPYVGG+AK+PT DCC+GLK VL KS+K
Sbjct: 23  AAAAVMGSG--RSDMDQDRAECADQLVGLASCLPYVGGDAKSPTIDCCTGLKGVLQKSKK 82

Query: 71  CLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFLGSSN 130
           CLC+LIKDRDDP+LGLK+N TLALGLP+ACHAPA+I  C+ LLHL  NS +AK F G++N
Sbjct: 83  CLCILIKDRDDPNLGLKINATLALGLPTACHAPANISACVDLLHLPANSTDAKLFRGAAN 142

Query: 131 SKETNTSSSAHATPVSGNSSQNT-----EVK-NGGTKRNNQWLGVEILICFITSSFLFT 184
           S    T SSA ATP +  +S +T     E K +GG +   +W  +EI +C +    L T
Sbjct: 143 S---TTVSSATATPAASANSTSTGGGSAEAKSHGGDRTTKRWWALEI-VCGVLMMALLT 195

[Close]

BLAST of MELO3C014672 vs. TAIR10
Match: AT2G44300.1 (AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 168.3 bits (425), Expect = 4.5e-42
Identity = 87/204 (42.65%), Postives = 124/204 (60.78%), Query Frame = 1


Query: 1   MAPSSAHFLFAALALLSVGFVSSNID---QDRAECADQVVGLATCLPYVGGEAKAPTPDC 60
           M     + +  A+AL+ V  V +  D   +D+ EC +Q+VG+ATCLPYV G+AK+PTPDC
Sbjct: 1   MESRKINLMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDC 60

Query: 61  CSGLKLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSP 120
           CSGLK VL+ ++KCLCV+I+DR+DP LGL++N++LAL LPS CHA AD+  C  LLHL P
Sbjct: 61  CSGLKQVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDP 120

Query: 121 NSPEAKDF---------LGSSNSKETNTSSSAHATPVSG-----NSSQNTEV--KNGGTK 180
           NSP+A+ F          G +++   ++      +P SG     NS + T V  +N    
Sbjct: 121 NSPDAQVFYQLAKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQS 180

Query: 181 RNNQWLGVEILICFITSSFLFTCI 186
              QWLG+E++  F    ++F  +
Sbjct: 181 FYKQWLGLEVVFHFFVIFYIFILV 204

[Close]

BLAST of MELO3C014672 vs. TAIR10
Match: AT1G55260.1 (AT1G55260.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 161.4 bits (407), Expect = 5.4e-40
Identity = 81/177 (45.76%), Postives = 111/177 (62.71%), Query Frame = 1


Query: 8   FLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDK 67
           F+   +  + +GF +S++ QDR EC +Q++ L+TC+PYVGG+AKAPT DCC+G   V+ K
Sbjct: 52  FITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRK 111

Query: 68  SRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPA-DIKDCIGLLHLSPNSPEAKDFL 127
           S KC+C+L++D+DDP LG+K+N TLA  LPSACH  A +I DCI +LHL  NS  AK+F 
Sbjct: 112 SEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFE 171

Query: 128 GSSNSKETNTSSSAHATPVSGNSSQNTE-VKNGGTKRNNQWLGVEILICFITSSFLF 183
                ++   S+S       G      E VK+ G K  + WLGVE+LI  + S   F
Sbjct: 172 NLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKS-WLGVELLIYLLVSLIFF 227

[Close]

BLAST of MELO3C014672 vs. TAIR10
Match: AT2G44290.1 (AT2G44290.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 161.0 bits (406), Expect = 7.1e-40
Identity = 86/194 (44.33%), Postives = 118/194 (60.82%), Query Frame = 1


Query: 12  ALALLSVGFV----SSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDK 71
           A+AL+ V  V     ++  +D+ EC  Q+VG+ATCLPYV G+AK+PTPDCCSGLK V++ 
Sbjct: 12  AIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINS 71

Query: 72  SRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDF-- 131
             KCLC++I++R+DP LGL+VN++LAL LPS CHA ADI  C  LLHL PNSP+A+ F  
Sbjct: 72  DMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQ 131

Query: 132 ----LGSSNSKETNTSSSAHATPVS--------GNSSQNTEV--KNGGTKRNNQWLGVEI 186
               L  + S    T S++  T +S         NS + T V   N     + QWLG+E+
Sbjct: 132 LAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLEV 191

[Close]

BLAST of MELO3C014672 vs. TAIR10
Match: AT3G58550.1 (AT3G58550.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 121.7 bits (304), Expect = 4.8e-28
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 1


Query: 9   LFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDK- 68
           L   +A++ +G V S + QD   C D +  L +CLP+V  +AKAP   CCS LK+ +DK 
Sbjct: 16  LCITVAVMFLG-VRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKG 75

Query: 69  -SRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFL 128
            +RKCLC L+KDRDDP LG KV+   A+ LPSACH PA+I  C  LLHL P+SP ++ F 
Sbjct: 76  QTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFK 135

Query: 129 GSSNSKETNTSSSAHATPVSGNSSQNTE 155
             + S        A +T  S     N +
Sbjct: 136 QFTESSSQTVGHKAVSTSSSIKGRDNKQ 162

[Close]

BLAST of MELO3C014672 vs. TAIR10
Match: AT1G73890.1 (AT1G73890.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 75.5 bits (184), Expect = 3.9e-14
Identity = 51/175 (29.14%), Postives = 76/175 (43.43%), Query Frame = 1


Query: 4   SSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKL 63
           +S+  L   L  LS  F+   + Q  A CA +++ LA C P+V G A+ P   CC  L  
Sbjct: 2   ASSTLLITLLISLSAFFLRMVLAQVPATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQ 61

Query: 64  VLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLL------HLSP 123
           +  +   CLC+ + +    S    +N TLAL LP  C+ PA+   C            S 
Sbjct: 62  IYSQEATCLCLFLNNTSTLSPAFPINQTLALQLPPLCNIPANSSTCSSSFPGEAPSDSSS 121

Query: 124 NSPEAKDFLGSSNSKETNTSSSAHATPVSGNSSQNTE-------VKNGGTKRNNQ 166
            +P      GS  S+    +S   ATPV+  + + T        +K+ G+K   Q
Sbjct: 122 VAPPPSSSTGSQISQGAKNNSRVAATPVAQMAPRPTSFMGLGYGLKSSGSKSEIQ 176

[Close]

BLAST of MELO3C014672 vs. NCBI nr
Match: gi|659097759|ref|XP_008449799.1| (PREDICTED: protein YLS3 [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 2.1e-102
Identity = 186/186 (100.00%), Postives = 186/186 (100.00%), Query Frame = 1


Query: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60
           MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG
Sbjct: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60

Query: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSP 120
           LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSP
Sbjct: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSP 120

Query: 121 EAKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSF 180
           EAKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSF
Sbjct: 121 EAKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSF 180

Query: 181 LFTCIW 187
           LFTCIW
Sbjct: 181 LFTCIW 186

[Close]

BLAST of MELO3C014672 vs. NCBI nr
Match: gi|778692985|ref|XP_011653558.1| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 173/186 (93.01%), Postives = 180/186 (96.77%), Query Frame = 1


Query: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60
           MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG
Sbjct: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60

Query: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSP 120
           LKLVLDKSRKCLCVLIKDRDDPSLGLKVNL+LALGLPSACHAPA+IKDC+GLLHLSPNSP
Sbjct: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP 120

Query: 121 EAKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSF 180
           EAKDFLGS NSKETNTS+ AHATPVSG+SSQN+EVKN GTKR NQWLGVE+ I FITSSF
Sbjct: 121 EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKR-NQWLGVEMFIWFITSSF 180

Query: 181 LFTCIW 187
           LFTCIW
Sbjct: 181 LFTCIW 185

[Close]

BLAST of MELO3C014672 vs. NCBI nr
Match: gi|593801598|ref|XP_007163836.1| (hypothetical protein PHAVU_001G268300g [Phaseolus vulgaris])

HSP 1 Score: 196.8 bits (499), Expect = 3.3e-47
Identity = 95/153 (62.09%), Postives = 119/153 (77.78%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L LL VGF +S++ +DR ECAD++VGLA+C+PYVGGEAK PT DCCSGLK+VLDKS+KC+
Sbjct: 33  LLLLLVGFANSDLGKDREECADKLVGLASCVPYVGGEAKTPTIDCCSGLKVVLDKSKKCI 92

Query: 73  CVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFLGSSNSK 132
           C+LIKDRDDP+LG+K+N TLA+ LPSACHAPA+I  C+ LLHL+PNSP+AK F G  NS 
Sbjct: 93  CILIKDRDDPNLGIKINATLAIQLPSACHAPANISHCVDLLHLAPNSPDAKVFEGFQNSA 152

Query: 133 ETNTS---SSAHATPVSGNSSQNTEVKNGGTKR 163
           +TN+S   SSA      G++S   E     TKR
Sbjct: 153 KTNSSTPVSSAAGGAEKGSNSSGQEKSGVSTKR 185

[Close]

BLAST of MELO3C014672 vs. NCBI nr
Match: gi|567907033|ref|XP_006445830.1| (hypothetical protein CICLE_v10016842mg [Citrus clementina])

HSP 1 Score: 193.4 bits (490), Expect = 3.7e-46
Identity = 97/174 (55.75%), Postives = 126/174 (72.41%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L L+ +G  SSNIDQD+AECAD+VV LATCLPYVGG+AK PT DCC GLK +LDKS+KCL
Sbjct: 15  LVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCL 74

Query: 73  CVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFLGSSNSK 132
           C+LIKD+DDPSLGLK+N TLA  LP+ACH+PA++ +CI LLHL PNSP+AK F G SN  
Sbjct: 75  CLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLT 134

Query: 133 ETNTSSSAHAT-PVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSFLFTCI 186
           + +  + A A    S N S + + K+ G K  ++ LG+E+ +   +  FL   +
Sbjct: 135 QGHGGTPATAVGSNSKNGSPSADQKSDGGKA-SRLLGLEMAVWGFSLHFLLVTL 187

[Close]

BLAST of MELO3C014672 vs. NCBI nr
Match: gi|702278791|ref|XP_010044958.1| (PREDICTED: protein YLS3-like [Eucalyptus grandis])

HSP 1 Score: 193.0 bits (489), Expect = 4.8e-46
Identity = 103/179 (57.54%), Postives = 131/179 (73.18%), Query Frame = 1


Query: 11  AALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRK 70
           AA A++  G   S++DQDRAECADQ+VGLA+CLPYVGG+AK+PT DCC+GLK VL KS+K
Sbjct: 23  AAAAVMGSG--RSDMDQDRAECADQLVGLASCLPYVGGDAKSPTIDCCTGLKGVLQKSKK 82

Query: 71  CLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSPEAKDFLGSSN 130
           CLC+LIKDRDDP+LGLK+N TLALGLP+ACHAPA+I  C+ LLHL  NS +AK F G++N
Sbjct: 83  CLCILIKDRDDPNLGLKINATLALGLPTACHAPANISACVDLLHLPANSTDAKLFRGAAN 142

Query: 131 SKETNTSSSAHATPVSGNSSQNT-----EVK-NGGTKRNNQWLGVEILICFITSSFLFT 184
           S    T SSA ATP +  +S +T     E K +GG +   +W  +EI +C +    L T
Sbjct: 143 S---TTVSSATATPAASANSTSTGGGSAEAKSHGGDRTTKRWWALEI-VCGVLMMALLT 195

The following BLAST results are available for this feature:

BLAST of MELO3C014672 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YLS3_ARATH	1.3e-38	44.33	Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1	[more]
LTPG1_ARATH	4.7e-09	25.48	Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LT...	[more]

BLAST of MELO3C014672 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ48_CUCSA	7.3e-94	93.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280560 PE=4 SV=1	[more]
V7D2S1_PHAVU	2.3e-47	62.09	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G268300g PE=4 SV=1	[more]
A0A067FA15_CITSI	2.6e-46	55.75	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029705mg PE=4 SV=1	[more]
V4U4P0_9ROSI	2.6e-46	55.75	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016842mg PE=4 SV=1	[more]
A0A059D932_EUCGR	3.3e-46	57.54	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03623 PE=4 SV=1	[more]

BLAST of MELO3C014672 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44300.1	4.5e-42	42.65	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G55260.1	5.4e-40	45.76	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G44290.1	7.1e-40	44.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G58550.1	4.8e-28	43.92	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G73890.1	3.9e-14	29.14	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of MELO3C014672 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097759\|ref\|XP_008449799.1\|	2.1e-102	100.00	PREDICTED: protein YLS3 [Cucumis melo]	[more]
gi\|778692985\|ref\|XP_011653558.1\|	1.1e-93	93.01	PREDICTED: protein YLS3 [Cucumis sativus]	[more]
gi\|593801598\|ref\|XP_007163836.1\|	3.3e-47	62.09	hypothetical protein PHAVU_001G268300g [Phaseolus vulgaris]	[more]
gi\|567907033\|ref\|XP_006445830.1\|	3.7e-46	55.75	hypothetical protein CICLE_v10016842mg [Citrus clementina]	[more]
gi\|702278791\|ref\|XP_010044958.1\|	4.8e-46	57.54	PREDICTED: protein YLS3-like [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006869	lipid transport
biological_process	GO:0006508	proteolysis
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0071554	cell wall organization or biogenesis
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0008233	peptidase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU50934	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014672T1	MELO3C014672T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU50934	MU50934	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 23..109 score: 5.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..109 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..109 score: 3.23
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 31..107 score: 1.7
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 8..186 score: 1.4
None	No IPR available	PANTHER	PTHR33044:SF28	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 8..186 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C014672	Csa4G280560	Cucumber (Chinese Long) v2	cumeB295
MELO3C014672	Cla003174	Watermelon (97103) v1	mewmB419
MELO3C014672	ClCG02G023920	Watermelon (Charleston Gray)	mewcgB376
MELO3C014672	Cla97C02G050090	Watermelon (97103) v2	mewmbB377
MELO3C014672	Bhi10G000340	Wax gourd	mewgoB484
MELO3C014672	CSPI04G13080	Wild cucumber (PI 183967)	cpimeB289
MELO3C014672	Cucsa.153260	Cucumber (Gy14) v1	cgymeB257
MELO3C014672	CmaCh02G012080	Cucurbita maxima (Rimu)	cmameB572
MELO3C014672	CmaCh20G000380	Cucurbita maxima (Rimu)	cmameB521
MELO3C014672	CmoCh20G000390	Cucurbita moschata (Rifu)	cmomeB509
MELO3C014672	Lsi10G009760	Bottle gourd (USVL1VR-Ls)	lsimeB072
MELO3C014672	Cp4.1LG16g09240	Cucurbita pepo (Zucchini)	cpemeB278
MELO3C014672	Cp4.1LG05g05270	Cucurbita pepo (Zucchini)	cpemeB696
MELO3C014672	CsGy4G012650	Cucumber (Gy14) v2	cgybmeB249
MELO3C014672	Carg02749	Silver-seed gourd	carmeB0910
MELO3C014672	Carg06943	Silver-seed gourd	carmeB0528
MELO3C014672	CsaV3_4G023430	Cucumber (Chinese Long) v3	cucmeB294

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
MELO3C014672	MELO3C023502	Melon (DHL92) v3.5.1	memeB089

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C014672	Cucumber (Gy14) v1	cgymeB413
MELO3C014672	Cucurbita moschata (Rifu)	cmomeB561