Cucsa.153260 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.153260
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Protease inhibitor/seed storage/lipid transfer protein family protein
Location	scaffold01124 : 442648 .. 444743 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCCCCATTTCCCAATACTCCACACACCTCTGATCCTCCTCCTCCTCCCTCTCCCTCTCCCTCATCGTTTCAATGGCTCCCTCATCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTCCTTTCTGTGGGGTTCGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGCCTCGCTACTTGCTTGCCATATGTGGGCGGTGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCTAGCCTTGGACTCAAAGTTAACCTTTCCCTTGCCCTTGGTCTTCCTTCTGCTTGTCACGCCCCTGCCAACATCAAAGATTGCGTCGGTATGCTTTCTTCCTTTTTAGATGATATATATTTAAATTTAGTTAAACTTTTGGATCAATAGATTGTTTAAGACCGTATCACATTATTATCTTGTAATGTTAGATGATATATATTTAAATTTACTTTCACTCACATGTATAAACTTTTAGTTTAACGGGTGATTTAAGACTTTGATTATTGGTAATGAAAAAAATACTTAATATTCAACTTGAGGTTTATCTTTCCTTGTGGATCTTCTTATTTGTTATGTAATTAGTTCTTCTTAGTTTGTGTTGGACTTCATCTATTTTTGTGCAATTCACTCTAAAAAATTTTGATTTTTTTAAAAACATTAAATTGTTATTTTCTTTCCTATGTATAGATGATGCGTCTAATCACTTTTCTTTTAATTCTTATCGTTTCTGCAAGATGAGATATGGTATAGAAATTAGATGTCTGTCACGTCGATGTGCTTTTAAAAATAGAATGAGATACAGAGATATTAACATAGGGTTTAACAGTATTTATAGTATGAAAATATAGAAAGTATTATACTTCTATTTATTGTACCTAAGTATTTTCCCTCAATTAGTTGTTTATACTACACGAGCTATACTAATAAAGAAAAATTGAAATACTGATTTTTCTATTTATTGTACATCATGTCGTGTTTCTAAAAATAAGATGAGACTCACGAATATTAATATAAGAAGTTCATTAATAGCGTGTCGATAAGAAATATATGATACTCTTGATACTAAAAAATTTCTAAAAAGGACGATACACTTAAGTATGGGTCTTTTCATACTTAATTATCGCTATTATTATTTTGTAATGGAGCATGTATATTATTCGTGTGAATATAGGGCTTCTCCATCTCTCGCCAAACTCCCCAGAGGCTAAGGATTTTTTGGGTTCGCCCAACTCCAAGGAAACTAACACTTCTACGCCAGCACATGCTACTCCGGGTATTAGCTCAAAACCCTTCTTCTTTTCAAAAAAAATTATTTAAATTTCTCAACTGCCAAAAACAAATTAATTTCGGACCCGTTTGAATTTACTTGAGAAAACTTGATTTTTCTAAACACTTTTAACAAAAATTGTTTAATAAGTGCACTTTAAAAGATCTCTAAAATATCTTAATACTTACATTCAACACTTGAAAATGTATTCCAATATCACTAAATTAAGATGGGTGATATGTTGTTTTAATAAATGAATACCTTGGCTACAAGTGCATGCATCATGTTCGTGTTGAGGATCGATACTACACTATAATATTTATAATATAGATGAGTTACACCGTTCTCGAATAAAAAAAGAAGATTAACTATGGATTACAACTTAGAAGTGAAGTAAATGTAATTTTTTGTTTGTGTTAAATTGTTGCAGTTAGTGGGAGTTCTTCACAAAACTCAGAAGTGAAGAATGATGGAACGAAGAGGAATCAGTGGTTGGGTGTGGAGATGTTCATTTGGTTCATTACTTCATCGTTTCTATTCACTTGCATTTGGTAAATTAAAAAAAAAAACAGAAAAAAAAAAAGAGAAAATAAAATGTTCCATTAGTTAATTATTATAAAATTATTTCATATATGTTTGCTTAGCTATAATTAATTTTATGATAATTATCTTGAGTGAGATCATGATATAAACTCTTTCAAATTTGTTTCATAACCATTACTTTTAAATGTAGTTTCTAATATTTAATTT

mRNA sequence

GCCCCCCATTTCCCAATACTCCACACACCTCTGAtcctcctcctcctccctctccctctccctcATCGTTTCAATGGCTCCCTCATCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTCCTTTCTGTGGGGTTCGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGCCTCGCTACTTGCTTGCCATATGTGGGCGGTGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCTAGCCTTGGACTCAAAGTTAACCTTTCCCTTGCCCTTGGTCTTCCTTCTGCTTGTCACGCCCCTGCCAACATCAAAGATTGCGTCGGGCTTCTCCATCTCTCGCCAAACTCCCCAGAGGCTAAGGATTTTTTGGGTTCGCCCAACTCCAAGGAAACTAACACTTCTACGCCAGCACATGCTACTCCGGTTAGTGGGAGTTCTTCACAAAACTCAGAAGTGAAGAATGATGGAACGAAGAGGAATCAGTGGTTGGGTGTGGAGATGTTCATTTGGTTCATTACTTCATCGTTTCTATTCACTTGCATTTGGTAAATTaaaaaaaaaaacagaaaaaaaaaaagagaaaataaaaTGTTCCATTAGttaattattataaaattatttCATATATGTTTGCTTAGCTATAATTAATTTTATGATAATTATCTTGAGTGAGATCATGATATAAACTCTTTCAAATTTGTTTCATAACCATTACTTTTAAATGTAGTTTCTAATATTTAATTT

Coding sequence (CDS)

ATGGCTCCCTCATCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTCCTTTCTGTGGGGTTCGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGCCTCGCTACTTGCTTGCCATATGTGGGCGGTGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCTAGCCTTGGACTCAAAGTTAACCTTTCCCTTGCCCTTGGTCTTCCTTCTGCTTGTCACGCCCCTGCCAACATCAAAGATTGCGTCGGGCTTCTCCATCTCTCGCCAAACTCCCCAGAGGCTAAGGATTTTTTGGGTTCGCCCAACTCCAAGGAAACTAACACTTCTACGCCAGCACATGCTACTCCGGTTAGTGGGAGTTCTTCACAAAACTCAGAAGTGAAGAATGATGGAACGAAGAGGAATCAGTGGTTGGGTGTGGAGATGTTCATTTGGTTCATTACTTCATCGTTTCTATTCACTTGCATTTGGTAA

Protein sequence

MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLFTCIW*

Homology

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BLAST of Cucsa.153260 vs. Swiss-Prot
Match: YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = 1


Query: 12  ALALLSVGFV----SSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDK 71
           A+AL+ V  V     ++  +D+ EC  Q+VG+ATCLPYV G+AK+PTPDCCSGLK V++ 
Sbjct: 12  AIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINS 71

Query: 72  SRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFL- 131
             KCLC++I++R+DP LGL+VN+SLAL LPS CHA A+I  C  LLHL PNSP+A+ F  
Sbjct: 72  DMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQ 131

Query: 132 ---GSPNSKETNTSTPAHATPVSGSSSQNSEVKND--------GTKR-----NQWLGVEM 185
              G   +   +  T + + P S SS+  S   N+        GT        QWLG+E+
Sbjct: 132 LAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLEV 191

[Close]

BLAST of Cucsa.153260 vs. Swiss-Prot
Match: LTPG1_ARATH (Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LTPG1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.6e-09
Identity = 37/133 (27.82%), Postives = 62/133 (46.62%), Query Frame = 1


Query: 31  ECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCLCVLIKDRDDPSLGLK--- 90
           EC      +  CL +  G+A  P+  CC  ++ + ++  KCLC +I+        LK   
Sbjct: 34  ECNQDFQKVTLCLDFATGKATIPSKKCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLG 93

Query: 91  VNLSLALGLPSACHA-PANIKDCVGLLHLSPNSPEAKDFLGSPNSKETNTSTPAHATPVS 150
           V     + LP++C    A+I +C  LL +SP+SP+A  F  +  +     +  + ATP +
Sbjct: 94  VQEDKLIQLPTSCQLHNASITNCPKLLGISPSSPDAAVFTNNATTTPVAPAGKSPATPAT 153

Query: 151 GSSSQNSEVKNDG 160
            +    S    DG
Sbjct: 154 STDKGGSASAKDG 166

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BLAST of Cucsa.153260 vs. TrEMBL
Match: A0A0A0KZ48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280560 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 8.6e-103
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1


Query: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60
           MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG
Sbjct: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60

Query: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP 120
           LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP
Sbjct: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP 120

Query: 121 EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFL 180
           EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFL
Sbjct: 121 EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFL 180

Query: 181 FTCIW 186
           FTCIW
Sbjct: 181 FTCIW 185

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BLAST of Cucsa.153260 vs. TrEMBL
Match: A0A067FA15_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029705mg PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.8e-51
Identity = 101/176 (57.39%), Postives = 131/176 (74.43%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L L+ +G  SSNIDQD+AECAD+VV LATCLPYVGG+AK PT DCC GLK +LDKS+KCL
Sbjct: 15  LVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCL 74

Query: 73  CVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNSK 132
           C+LIKD+DDPSLGLK+N +LA  LP+ACH+PAN+ +C+ LLHL PNSP+AK F G  N  
Sbjct: 75  CLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLT 134

Query: 133 ETNTSTPAHATPVSGSSSQN----SEVKNDGTKRNQWLGVEMFIWFITSSFLFTCI 185
           + +  TPA A    GS+S+N    ++ K+DG K ++ LG+EM +W  +  FL   +
Sbjct: 135 QGHGGTPATAV---GSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTL 187

[Close]

BLAST of Cucsa.153260 vs. TrEMBL
Match: V4U4P0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016842mg PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.8e-51
Identity = 101/176 (57.39%), Postives = 131/176 (74.43%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L L+ +G  SSNIDQD+AECAD+VV LATCLPYVGG+AK PT DCC GLK +LDKS+KCL
Sbjct: 15  LVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCL 74

Query: 73  CVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNSK 132
           C+LIKD+DDPSLGLK+N +LA  LP+ACH+PAN+ +C+ LLHL PNSP+AK F G  N  
Sbjct: 75  CLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLT 134

Query: 133 ETNTSTPAHATPVSGSSSQN----SEVKNDGTKRNQWLGVEMFIWFITSSFLFTCI 185
           + +  TPA A    GS+S+N    ++ K+DG K ++ LG+EM +W  +  FL   +
Sbjct: 135 QGHGGTPATAV---GSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTL 187

[Close]

BLAST of Cucsa.153260 vs. TrEMBL
Match: A0A061GSH0_THECC (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative OS=Theobroma cacao GN=TCM_040200 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.9e-49
Identity = 102/170 (60.00%), Postives = 128/170 (75.29%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L L+ +GF SS+++QD+ ECA+Q+VGLA+CLPYVGG++K PT DCCSGLK VLDKSRKCL
Sbjct: 14  LLLMLLGFASSDVNQDKTECANQLVGLASCLPYVGGQSKTPTIDCCSGLKQVLDKSRKCL 73

Query: 73  CVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNSK 132
           CVLIKDRDDPSLGLK+N +LA  LPS CHAP N+ +C+ LLHL+PNS EAK F G     
Sbjct: 74  CVLIKDRDDPSLGLKINATLAATLPSTCHAPVNMTECISLLHLAPNSQEAKAFEGYEKLT 133

Query: 133 ETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLFT 183
           E + +TPA A   S SS+  +  K+DG K  +W+GVEM   F  S ++FT
Sbjct: 134 EGHANTPA-ANGNSTSSASTAAEKSDGGKGKRWVGVEMA--FGVSLWIFT 180

[Close]

BLAST of Cucsa.153260 vs. TrEMBL
Match: V7D2S1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G268300g PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.1e-48
Identity = 97/153 (63.40%), Postives = 119/153 (77.78%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L LL VGF +S++ +DR ECAD++VGLA+C+PYVGGEAK PT DCCSGLK+VLDKS+KC+
Sbjct: 33  LLLLLVGFANSDLGKDREECADKLVGLASCVPYVGGEAKTPTIDCCSGLKVVLDKSKKCI 92

Query: 73  CVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNSK 132
           C+LIKDRDDP+LG+K+N +LA+ LPSACHAPANI  CV LLHL+PNSP+AK F G  NS 
Sbjct: 93  CILIKDRDDPNLGIKINATLAIQLPSACHAPANISHCVDLLHLAPNSPDAKVFEGFQNSA 152

Query: 133 ETNTSTP---AHATPVSGSSSQNSEVKNDGTKR 163
           +TN+STP   A      GS+S   E     TKR
Sbjct: 153 KTNSSTPVSSAAGGAEKGSNSSGQEKSGVSTKR 185

[Close]

BLAST of Cucsa.153260 vs. TAIR10
Match: AT2G44300.1 (AT2G44300.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 167.5 bits (423), Expect = 7.6e-42
Identity = 90/204 (44.12%), Postives = 124/204 (60.78%), Query Frame = 1


Query: 1   MAPSSAHFLFAALALLSVGFVSSNID---QDRAECADQVVGLATCLPYVGGEAKAPTPDC 60
           M     + +  A+AL+ V  V +  D   +D+ EC +Q+VG+ATCLPYV G+AK+PTPDC
Sbjct: 1   MESRKINLMATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDC 60

Query: 61  CSGLKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSP 120
           CSGLK VL+ ++KCLCV+I+DR+DP LGL++N+SLAL LPS CHA A++  C  LLHL P
Sbjct: 61  CSGLKQVLNSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDP 120

Query: 121 NSPEAKDFL--------GSPNSKETNTST-PAHATPVSGSSSQNSEVKNDGTK-RN---- 180
           NSP+A+ F           P S  T +S  P   +P SGS   N+  +      RN    
Sbjct: 121 NSPDAQVFYQLAKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQS 180

Query: 181 ---QWLGVEMFIWFITSSFLFTCI 185
              QWLG+E+   F    ++F  +
Sbjct: 181 FYKQWLGLEVVFHFFVIFYIFILV 204

[Close]

BLAST of Cucsa.153260 vs. TAIR10
Match: AT1G55260.1 (AT1G55260.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-41
Identity = 82/178 (46.07%), Postives = 116/178 (65.17%), Query Frame = 1


Query: 8   FLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDK 67
           F+   +  + +GF +S++ QDR EC +Q++ L+TC+PYVGG+AKAPT DCC+G   V+ K
Sbjct: 52  FITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRK 111

Query: 68  SRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPA-NIKDCVGLLHLSPNSPEAKDF- 127
           S KC+C+L++D+DDP LG+K+N +LA  LPSACH  A NI DC+ +LHL  NS  AK+F 
Sbjct: 112 SEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFE 171

Query: 128 -LGSPNSKETNTS-TPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLF 182
            LG       +TS T  H     G  ++   VK++G K   WLGVE+ I+ + S   F
Sbjct: 172 NLGRIEDNYNSTSPTQIHKDGTGGGKAE--PVKSNGWKEKSWLGVELLIYLLVSLIFF 227

[Close]

BLAST of Cucsa.153260 vs. TAIR10
Match: AT2G44290.1 (AT2G44290.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 7.8e-39
Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = 1


Query: 12  ALALLSVGFV----SSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDK 71
           A+AL+ V  V     ++  +D+ EC  Q+VG+ATCLPYV G+AK+PTPDCCSGLK V++ 
Sbjct: 12  AIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINS 71

Query: 72  SRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFL- 131
             KCLC++I++R+DP LGL+VN+SLAL LPS CHA A+I  C  LLHL PNSP+A+ F  
Sbjct: 72  DMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQ 131

Query: 132 ---GSPNSKETNTSTPAHATPVSGSSSQNSEVKND--------GTKR-----NQWLGVEM 185
              G   +   +  T + + P S SS+  S   N+        GT        QWLG+E+
Sbjct: 132 LAKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWLGLEV 191

[Close]

BLAST of Cucsa.153260 vs. TAIR10
Match: AT3G58550.1 (AT3G58550.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29
Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 1


Query: 9   LFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDK- 68
           L   +A++ +G V S + QD   C D +  L +CLP+V  +AKAP   CCS LK+ +DK 
Sbjct: 16  LCITVAVMFLG-VRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKG 75

Query: 69  -SRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFL 128
            +RKCLC L+KDRDDP LG KV+ + A+ LPSACH PANI  C  LLHL P+SP ++ F 
Sbjct: 76  QTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIF- 135

Query: 129 GSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFI 176
                 E+++ T  H    + SS +  + K  G      +   + IW+I
Sbjct: 136 --KQFTESSSQTVGHKAVSTSSSIKGRDNKQFGL----MMAGALSIWYI 176

[Close]

BLAST of Cucsa.153260 vs. TAIR10
Match: AT1G03103.1 (AT1G03103.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 42/140 (30.00%), Postives = 65/140 (46.43%), Query Frame = 1


Query: 9   LFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKS 68
           + A LAL+   F+       +A C D +  L+ CL Y+ G + +P+  CC     V+  S
Sbjct: 2   ILAILALVIATFLYGGATTVQAGCRDTLTSLSPCLYYLNGGSSSPSWSCCRQFSTVVQSS 61

Query: 69  RKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGS 128
            +CLC ++   +    G K N +LAL LP+AC+               P +  A   +GS
Sbjct: 62  PECLCSVVNSNESSFYGFKFNRTLALNLPTACNVQTPSPSLCNTGGNVPTTLPANTPVGS 121

Query: 129 PNSKETNTSTPAHATPVSGS 149
           P S  + + T + A   SGS
Sbjct: 122 PRSAPSPSGTTSPANTPSGS 141

[Close]

BLAST of Cucsa.153260 vs. NCBI nr
Match: gi|778692985|ref|XP_011653558.1| (PREDICTED: protein YLS3 [Cucumis sativus])

HSP 1 Score: 380.9 bits (977), Expect = 1.2e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1


Query: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60
           MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG
Sbjct: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60

Query: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP 120
           LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP
Sbjct: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP 120

Query: 121 EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFL 180
           EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFL
Sbjct: 121 EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFL 180

Query: 181 FTCIW 186
           FTCIW
Sbjct: 181 FTCIW 185

[Close]

BLAST of Cucsa.153260 vs. NCBI nr
Match: gi|659097759|ref|XP_008449799.1| (PREDICTED: protein YLS3 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 1.0e-93
Identity = 173/186 (93.01%), Postives = 180/186 (96.77%), Query Frame = 1


Query: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60
           MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG
Sbjct: 1   MAPSSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSG 60

Query: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSP 120
           LKLVLDKSRKCLCVLIKDRDDPSLGLKVNL+LALGLPSACHAPA+IKDC+GLLHLSPNSP
Sbjct: 61  LKLVLDKSRKCLCVLIKDRDDPSLGLKVNLTLALGLPSACHAPADIKDCIGLLHLSPNSP 120

Query: 121 EAKDFLGSPNSKETNTSTPAHATPVSGSSSQNSEVKNDGTKR-NQWLGVEMFIWFITSSF 180
           EAKDFLGS NSKETNTS+ AHATPVSG+SSQN+EVKN GTKR NQWLGVE+ I FITSSF
Sbjct: 121 EAKDFLGSSNSKETNTSSSAHATPVSGNSSQNTEVKNGGTKRNNQWLGVEILICFITSSF 180

Query: 181 LFTCIW 186
           LFTCIW
Sbjct: 181 LFTCIW 186

[Close]

BLAST of Cucsa.153260 vs. NCBI nr
Match: gi|567907033|ref|XP_006445830.1| (hypothetical protein CICLE_v10016842mg [Citrus clementina])

HSP 1 Score: 208.8 bits (530), Expect = 8.4e-51
Identity = 101/176 (57.39%), Postives = 131/176 (74.43%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L L+ +G  SSNIDQD+AECAD+VV LATCLPYVGG+AK PT DCC GLK +LDKS+KCL
Sbjct: 15  LVLMLLGLASSNIDQDKAECADKVVALATCLPYVGGDAKTPTVDCCGGLKQLLDKSKKCL 74

Query: 73  CVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNSK 132
           C+LIKD+DDPSLGLK+N +LA  LP+ACH+PAN+ +C+ LLHL PNSP+AK F G  N  
Sbjct: 75  CLLIKDKDDPSLGLKINSTLAANLPTACHSPANVSECINLLHLPPNSPDAKVFQGFSNLT 134

Query: 133 ETNTSTPAHATPVSGSSSQN----SEVKNDGTKRNQWLGVEMFIWFITSSFLFTCI 185
           + +  TPA A    GS+S+N    ++ K+DG K ++ LG+EM +W  +  FL   +
Sbjct: 135 QGHGGTPATAV---GSNSKNGSPSADQKSDGGKASRLLGLEMAVWGFSLHFLLVTL 187

[Close]

BLAST of Cucsa.153260 vs. NCBI nr
Match: gi|590582837|ref|XP_007014734.1| (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 203.8 bits (517), Expect = 2.7e-49
Identity = 102/170 (60.00%), Postives = 128/170 (75.29%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L L+ +GF SS+++QD+ ECA+Q+VGLA+CLPYVGG++K PT DCCSGLK VLDKSRKCL
Sbjct: 14  LLLMLLGFASSDVNQDKTECANQLVGLASCLPYVGGQSKTPTIDCCSGLKQVLDKSRKCL 73

Query: 73  CVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNSK 132
           CVLIKDRDDPSLGLK+N +LA  LPS CHAP N+ +C+ LLHL+PNS EAK F G     
Sbjct: 74  CVLIKDRDDPSLGLKINATLAATLPSTCHAPVNMTECISLLHLAPNSQEAKAFEGYEKLT 133

Query: 133 ETNTSTPAHATPVSGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLFT 183
           E + +TPA A   S SS+  +  K+DG K  +W+GVEM   F  S ++FT
Sbjct: 134 EGHANTPA-ANGNSTSSASTAAEKSDGGKGKRWVGVEMA--FGVSLWIFT 180

[Close]

BLAST of Cucsa.153260 vs. NCBI nr
Match: gi|593801598|ref|XP_007163836.1| (hypothetical protein PHAVU_001G268300g [Phaseolus vulgaris])

HSP 1 Score: 200.3 bits (508), Expect = 3.0e-48
Identity = 97/153 (63.40%), Postives = 119/153 (77.78%), Query Frame = 1


Query: 13  LALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCL 72
           L LL VGF +S++ +DR ECAD++VGLA+C+PYVGGEAK PT DCCSGLK+VLDKS+KC+
Sbjct: 33  LLLLLVGFANSDLGKDREECADKLVGLASCVPYVGGEAKTPTIDCCSGLKVVLDKSKKCI 92

Query: 73  CVLIKDRDDPSLGLKVNLSLALGLPSACHAPANIKDCVGLLHLSPNSPEAKDFLGSPNSK 132
           C+LIKDRDDP+LG+K+N +LA+ LPSACHAPANI  CV LLHL+PNSP+AK F G  NS 
Sbjct: 93  CILIKDRDDPNLGIKINATLAIQLPSACHAPANISHCVDLLHLAPNSPDAKVFEGFQNSA 152

Query: 133 ETNTSTP---AHATPVSGSSSQNSEVKNDGTKR 163
           +TN+STP   A      GS+S   E     TKR
Sbjct: 153 KTNSSTPVSSAAGGAEKGSNSSGQEKSGVSTKR 185

The following BLAST results are available for this feature:

BLAST of Cucsa.153260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YLS3_ARATH	1.4e-37	43.81	Protein YLS3 OS=Arabidopsis thaliana GN=YLS3 PE=2 SV=1	[more]
LTPG1_ARATH	3.6e-09	27.82	Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LT...	[more]

BLAST of Cucsa.153260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ48_CUCSA	8.6e-103	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G280560 PE=4 SV=1	[more]
A0A067FA15_CITSI	5.8e-51	57.39	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029705mg PE=4 SV=1	[more]
V4U4P0_9ROSI	5.8e-51	57.39	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016842mg PE=4 SV=1	[more]
A0A061GSH0_THECC	1.9e-49	60.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
V7D2S1_PHAVU	2.1e-48	63.40	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G268300g PE=4 SV=1	[more]

BLAST of Cucsa.153260 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44300.1	7.6e-42	44.12	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G55260.1	2.2e-41	46.07	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G44290.1	7.8e-39	43.81	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G58550.1	1.5e-29	42.01	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G03103.1	1.1e-13	30.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Cucsa.153260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778692985\|ref\|XP_011653558.1\|	1.2e-102	100.00	PREDICTED: protein YLS3 [Cucumis sativus]	[more]
gi\|659097759\|ref\|XP_008449799.1\|	1.0e-93	93.01	PREDICTED: protein YLS3 [Cucumis melo]	[more]
gi\|567907033\|ref\|XP_006445830.1\|	8.4e-51	57.39	hypothetical protein CICLE_v10016842mg [Citrus clementina]	[more]
gi\|590582837\|ref\|XP_007014734.1\|	2.7e-49	60.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
gi\|593801598\|ref\|XP_007163836.1\|	3.0e-48	63.40	hypothetical protein PHAVU_001G268300g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.153260.1	Cucsa.153260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 23..109 score: 9.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..109 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 31..109 score: 5.67
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 31..107 score: 2.2
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 8..185 score: 4.7
None	No IPR available	PANTHER	PTHR33044:SF28	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 8..185 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.153260	Cla003174	Watermelon (97103) v1	cgywmB272
Cucsa.153260	Csa4G280560	Cucumber (Chinese Long) v2	cgycuB220
Cucsa.153260	MELO3C014672	Melon (DHL92) v3.5.1	cgymeB257
Cucsa.153260	ClCG02G023920	Watermelon (Charleston Gray)	cgywcgB258
Cucsa.153260	CSPI04G13080	Wild cucumber (PI 183967)	cgycpiB225
Cucsa.153260	CmaCh20G000380	Cucurbita maxima (Rimu)	cgycmaB0423
Cucsa.153260	CmaCh02G012080	Cucurbita maxima (Rimu)	cgycmaB0424
Cucsa.153260	CmoCh20G000390	Cucurbita moschata (Rifu)	cgycmoB0423
Cucsa.153260	Lsi10G009760	Bottle gourd (USVL1VR-Ls)	cgylsiB245
Cucsa.153260	Cp4.1LG16g09240	Cucurbita pepo (Zucchini)	cgycpeB0409
Cucsa.153260	Cp4.1LG05g05270	Cucurbita pepo (Zucchini)	cgycpeB0410
Cucsa.153260	MELO3C014672.2	Melon (DHL92) v3.6.1	cgymedB255
Cucsa.153260	CsaV3_4G023430	Cucumber (Chinese Long) v3	cgycucB231
Cucsa.153260	Cla97C02G050090	Watermelon (97103) v2	cgywmbB259
Cucsa.153260	Bhi10G000340	Wax gourd	cgywgoB298
Cucsa.153260	Carg06943	Silver-seed gourd	carcgyB0603
Cucsa.153260	Carg02749	Silver-seed gourd	carcgyB1040

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.153260	Cucumber (Gy14) v1	cgycgyB094
Cucsa.153260	Cucurbita moschata (Rifu)	cgycmoB0424