Cp4.1LG04g13180 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g13180
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionhydroxyproline-rich glycoprotein family protein
LocationCp4.1LG04 : 10773136 .. 10776297 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGATCGGAAGTTATAGTGAAATAGGAGGGGTAAATGAGGAAAAAAGTGAGAAGAAAGACAAAGATCCAATGAGTTTACCCATTGAACTCGGGTTGCGTGTGACGTGTTCACCAGTGTTTGAAGACTGAGTTTTTGAGTGGGCAAAAATCAAGACACCCTCTCAAAAATTAAAGCTAAGGTAAAGCAAAATTCCCACTCCCAATTTTCTCTGCAACTCCTTAAAGCTTCTTCTTCTTTCTTCAAAATCTTCGCCCTCACGATCTCCCTTTCTTTTCTTTTTTCCAATCACAACAATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCCCCCGCCTCTCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCCCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGCTGGTGTGGGTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGTAATTCTTATTATTTGAACTTAATGTTGCGATATTGAAGGTCCAGGAGACGGAATTTAGAGTATGATTTTTATGTTTTTGCTTGAATGATGAAATTTCGTGATTTCAGCAGTGTTTTTAGCCCTATTGCTTCATGTGTTGCCATTGTTCCTTGTCTTTTTTGTTGTTGCCATTATTGGTAACAAGGGGAGACATGTTTATGAATCTTAGTACTCTCACTGTCTTGTCTTGTCTTGTGAATTTCTTCTCTAATATAATGTTCTTCTGTATTTGCTTCTTCAAACTTGGTTTTCTTGTCAAATTTGTCAAATTTGACGACGATCTCTATAACAGTCCACTGCTAGCAAATATTGTCTTGTCCTCTTTGAACTTTCCCTTCCAGGCTTCCCCTCGAGGTTTTTAAACGCGTATACTAGGAAGAGGTTTCTACACCCTCGTAAAAAATGCTTCGGGACTTTCCCTTCCAAGCTTATTGTCTTCTTTGAGATTTCCTTTCCAGGCTTCCCCTCAAGATTCTAAAACACGTCTGCTAGGGAGAGGTCTACACCCTTATAAGAAATGTTGTGTTCCCCTCTCTGACCGATGTTGGACCTCACAATTCTGCTAGAGAGAGATTTCTACACCCTTATAAGAAATGCTTCGTTTCCCTCCCCAACTGATGTGGGATCTCACAATCCCCATCTTGGGGGCCAGCGTCCTCGTTAGCACACCTTTCAGTGTCTGGCTCTATACCATTTGTAACAGTTTGAGGCTACTCCATTTTTATTAGGGAGTCTTATAAGAAATGCTCCATTCCCCTCTTCAACCATTCAACCAATGTGGGGTCTCATAATCTCTTTTGTAGGCTCTCATATGAATATGTGCAAAATGTATACTCATTTGTTAGTGAGAATTGTGTTCTTGGTTGGGACATCGAGGGAAAGAACAGAACAAAATTAGTGGCAAACCTTTGCTTCATAGCTTAAATATTTCTTCCGTGCAGCTTTTTTTTTTGTGTAAACAATCAAAACATAAAGTTTTTGGTGCAATTTTGCAGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGTATGCATCTGCTCAAATTCATTAGTACTTCAATTTCATATTCTTGTGTATTCTTTTCTGAAATTTAGTGTTATTTCCCCAAATGTTAACAATGATTGTTCATTTCACTTATCCTTGCTCATCCATAGTCTATTGTTTTGGCCTTTTCATAATTGAAACAACCATAATAATTTATTGAAACTGCACACGAAGTAACTTTGAAGCGAACTTTCACCACCATTACATGAAGTAACTTTGAAGTCAAGTGTCTTTGTAACAGCCCAAGTTCACGCTAGCAGATAATTTTTAAAACGCGTCTATTAGGGAGAGGTTTCTACACCCTTGTAAAGAATGTTTTGTTTCCTTCTCCAACCGATGTGGAATCTGAGAGTCTCTTTTAACTTGTTCACTTTTATCATTGAGTACATTTATTTTCAGCGAATACATAGGGTTAACTTGTGGAACCAGTCTGTTGAGAAAGAAAAGTAGGATGAAGAGGCTAACTGTGCTGCGGATGTGTGATCGAAGTTAGCCCTTATGCTTCTATAGAGTAAAGTGAAACAATAATATATACATTTCTTGCTTGCCTTTGCTGAATTCTATGATTTAGTCCTTGAACAAGAACCGTACAGTTTTTGCTTGGAGAGGGGAACGAAGTATTCTTTATAAGAGTGTGGAAATCTCTCCCTAGCAGATACGTTTTTAAACTTTTAGAGGAAGCCCAAAAGGACAATATCTATTAGCAGTGGGCGTGGGCTGTTACAAATGGTATTAGAGCCAGATACCTGGCGGTGTGCCAGCGAGAATGTTGGACTCTCAAGGGGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGAGAATGAAGCATTCTTTAAAAAGATGTGGAAACCTCTCCCTAACAGAAACGTTTTAAAACCGTGAGGAGAAGCCCAAATGAAATGAATTCAACTATGTGTATATGAGATGTTGAATCATAGCATTCTTCTGTTACTGCAGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACATGTTTGGTTTTGTTTTGATATCACCTTTTGTTTGCTTCCAGAATCAAAATTATTATATGTTTGTAGGAACTCCTCATCTTTGGACAGTATAGAAACTATTTATACCTATCTATGCAATGGCTGAACTGGATCTCATTGCTTATGAAACGCTGATGAAGAGGTCGGCCATTATACGAAAATCGACAGAATTCAGTCATGTTGTAGTTGTTAACCCGTGTAATGTTATGTATTGTCGTTGTCGTCGTCGTCTTCTTCTTTTTCCCGAGTTGATTCATCTTTTGTTCTTTTGAAGCTGAACCTATGGCTTATGTATTTTGAGCTACCTTTTTTTGGTTATTTGTGGCATTGTAATGAAGGCAATGTTTGTCTAAAGTTGTTATAGTTTATAGAAATGATGAACATACATTGACTTTGAATCATGACATAAT

mRNA sequence

CAGATCGGAAGTTATAGTGAAATAGGAGGGGTAAATGAGGAAAAAAGTGAGAAGAAAGACAAAGATCCAATGAGTTTACCCATTGAACTCGGGTTGCGTGTGACGTGTTCACCAGTGTTTGAAGACTGAGTTTTTGAGTGGGCAAAAATCAAGACACCCTCTCAAAAATTAAAGCTAAGGTAAAGCAAAATTCCCACTCCCAATTTTCTCTGCAACTCCTTAAAGCTTCTTCTTCTTTCTTCAAAATCTTCGCCCTCACGATCTCCCTTTCTTTTCTTTTTTCCAATCACAACAATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCCCCCGCCTCTCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCCCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGCTGGTGTGGGTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGTGTTTTTAGCCCTATTGCTTCATGTGTTGCCATTGTTCCTTGTCTTTTTTGTTGTTGCCATTATTGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGAACTCCTCATCTTTGGACAGTATAGAAACTATTTATACCTATCTATGCAATGGCTGAACTGGATCTCATTGCTTATGAAACGCTGATGAAGAGGTCGGCCATTATACGAAAATCGACAGAATTCAGTCATGTTGTAGTTGTTAACCCGTGTAATGTTATGTATTGTCGTTGTCGTCGTCGTCTTCTTCTTTTTCCCGAGTTGATTCATCTTTTGTTCTTTTGAAGCTGAACCTATGGCTTATGTATTTTGAGCTACCTTTTTTTGGTTATTTGTGGCATTGTAATGAAGGCAATGTTTGTCTAAAGTTGTTATAGTTTATAGAAATGATGAACATACATTGACTTTGAATCATGACATAAT

Coding sequence (CDS)

ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCCCCCGCCTCTCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCCCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGCTGGTGTGGGTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGTGTTTTTAGCCCTATTGCTTCATGTGTTGCCATTGTTCCTTGTCTTTTTTGTTGTTGCCATTATTGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAA

Protein sequence

MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
Homology
[Close]
BLAST of Cp4.1LG04g13180 vs. TrEMBL
Match: A0A0A0LUN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423260 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.2e-59
Identity = 125/159 (78.62%), Postives = 129/159 (81.13%), Query Frame = 1 

Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP TPSP S PQP+FESPKKVIQPPPVQPPP QFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPLFESPKKVIQPPPVQPPPHQFDK 60

Query: 61  SVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDDHLAR 120
           SVS+A V NGNASV+GFFRNAVSKVQN                      AHSSLDDHLAR
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN----------------------AHSSLDDHLAR 120

Query: 121 WFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           WFGLNQSKYQWALDDYYESKGME GDMKAKEP SKAQSV
Sbjct: 121 WFGLNQSKYQWALDDYYESKGMETGDMKAKEPPSKAQSV 137

[Close]
BLAST of Cp4.1LG04g13180 vs. TrEMBL
Match: V4U164_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009829mg PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 9.4e-42
Identity = 105/163 (64.42%), Postives = 115/163 (70.55%), Query Frame = 1 

Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKK--VIQPPPVQPPPQQ 60
           MPIN + +TPPP+IGKIGPYTVFMTPPSTP P  P  PVF SP K  V  PPPVQPPP Q
Sbjct: 1   MPINKDPATPPPMIGKIGPYTVFMTPPSTPKP--PNDPVFNSPHKKVVAPPPPVQPPPHQ 60

Query: 61  FDKSVSVAGVGN-GNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDD 120
           F+KSV+ A  G+  + SV+GFFRNAV+KVQN                      AHSSLDD
Sbjct: 61  FEKSVAAAAAGDIHSGSVSGFFRNAVTKVQN----------------------AHSSLDD 120

Query: 121 HLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           HLARWFGLNQSKYQWALDDYYESKG+E    KAKE SSK QSV
Sbjct: 121 HLARWFGLNQSKYQWALDDYYESKGLEKEVAKAKEMSSKVQSV 139

[Close]
BLAST of Cp4.1LG04g13180 vs. TrEMBL
Match: A0A061GXK7_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_039162 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.6e-41
Identity = 103/167 (61.68%), Postives = 113/167 (67.66%), Query Frame = 1 

Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVI-------QPPPVQ 60
           MPIN + STPPP+IGKIGPYTVF+TPPSTP+P  PP  VFESPKKV         PPPVQ
Sbjct: 1   MPINRDPSTPPPMIGKIGPYTVFVTPPSTPTPTEPP--VFESPKKVAAPPFAAASPPPVQ 60

Query: 61  PPPQQFDKSVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHS 120
           PPPQQFDKS   +   N + S+ GFF+NA SKV N                      AHS
Sbjct: 61  PPPQQFDKSFVAS---NSDGSLLGFFKNAASKVHN----------------------AHS 120

Query: 121 SLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           SLDDHLARWFGLNQSKYQWALDDYYESKG+E   +K KE SSK QSV
Sbjct: 121 SLDDHLARWFGLNQSKYQWALDDYYESKGLEKEGVKVKEMSSKIQSV 140

[Close]
BLAST of Cp4.1LG04g13180 vs. TrEMBL
Match: A0A0B0PD50_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_30240 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.0e-40
Identity = 99/165 (60.00%), Postives = 114/165 (69.09%), Query Frame = 1 

Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPP-----PVQPP 60
           MPIN + STPPP+IGKIGPYTVF+TPPSTP+P  PP  VF+SP+K + PP     PV+PP
Sbjct: 1   MPINRDPSTPPPMIGKIGPYTVFVTPPSTPTPTEPP--VFQSPQKAVAPPASAPPPVRPP 60

Query: 61  PQQFDKSVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSL 120
           PQQFDKS   +   + + S+ GFFRNA+ KVQN                      AHSSL
Sbjct: 61  PQQFDKSFIAS---DSDGSILGFFRNAIFKVQN----------------------AHSSL 120

Query: 121 DDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           DDHLARWFGLNQSKYQWALDDYYESKG+E   +K KE SSK QSV
Sbjct: 121 DDHLARWFGLNQSKYQWALDDYYESKGLEKEGVKVKEISSKMQSV 138

[Close]
BLAST of Cp4.1LG04g13180 vs. TrEMBL
Match: A0A059CJV6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00145 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.6e-39
Identity = 95/159 (59.75%), Postives = 106/159 (66.67%), Query Frame = 1 

Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60
           M +N ES PPP+IGKIGPYTVFMTPPSTP P  P  PVFE PKKV  PPPVQPPPQQF+K
Sbjct: 1   MAVNKESVPPPVIGKIGPYTVFMTPPSTPKPTEPAPPVFEPPKKVA-PPPVQPPPQQFEK 60

Query: 61  SVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDDHLAR 120
                     N S  GFF+NAV +VQ+                      AHSSLDDH+AR
Sbjct: 61  P-------GQNGSFLGFFKNAVDRVQD----------------------AHSSLDDHVAR 120

Query: 121 WFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           WFGLNQSKYQWALDDYYE+KG+E   +K KE SSK Q+V
Sbjct: 121 WFGLNQSKYQWALDDYYENKGLEKDGIKTKEFSSKQQNV 129

[Close]
BLAST of Cp4.1LG04g13180 vs. TAIR10
Match: AT2G18910.1 (AT2G18910.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-35
Identity = 89/160 (55.62%), Postives = 104/160 (65.00%), Query Frame = 1 

Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFD 60
           MPIN + STPPP+IGKIGPYTVFMTPP+TP P   P  V + P   +  PPV PPPQQF 
Sbjct: 1   MPINKDPSTPPPVIGKIGPYTVFMTPPATPKPPESPSAVSQKP---VMAPPVLPPPQQF- 60

Query: 61  KSVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDDHLA 120
           KSV+ +   + + SV GFF+NAV+KVQN                      AHSS+DDHL 
Sbjct: 61  KSVASS---DQDGSVLGFFKNAVTKVQN----------------------AHSSVDDHLV 120

Query: 121 RWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           RWFGLNQSKYQWALD+YYESK  +   +KAKE   K QSV
Sbjct: 121 RWFGLNQSKYQWALDEYYESKESDMKTVKAKEMPGKVQSV 131

[Close]
BLAST of Cp4.1LG04g13180 vs. NCBI nr
Match: gi|659107262|ref|XP_008453592.1| (PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 126/159 (79.25%), Postives = 129/159 (81.13%), Query Frame = 1 

Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP TPSP S PQPVFESPKKVIQPPPVQPPP QFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPVFESPKKVIQPPPVQPPPHQFDK 60

Query: 61  SVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDDHLAR 120
           SVS+A V NGNASV+GFFRNAVSKVQN                      AHS LDDHLAR
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN----------------------AHSRLDDHLAR 120

Query: 121 WFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           WFGLNQSKYQWALDDYYESKGME GDMKAKEPSSKAQSV
Sbjct: 121 WFGLNQSKYQWALDDYYESKGMETGDMKAKEPSSKAQSV 137

[Close]
BLAST of Cp4.1LG04g13180 vs. NCBI nr
Match: gi|449457179|ref|XP_004146326.1| (PREDICTED: wiskott-Aldrich syndrome protein family member 2 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 3.2e-59
Identity = 125/159 (78.62%), Postives = 129/159 (81.13%), Query Frame = 1 

Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP TPSP S PQP+FESPKKVIQPPPVQPPP QFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPLFESPKKVIQPPPVQPPPHQFDK 60

Query: 61  SVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDDHLAR 120
           SVS+A V NGNASV+GFFRNAVSKVQN                      AHSSLDDHLAR
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN----------------------AHSSLDDHLAR 120

Query: 121 WFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           WFGLNQSKYQWALDDYYESKGME GDMKAKEP SKAQSV
Sbjct: 121 WFGLNQSKYQWALDDYYESKGMETGDMKAKEPPSKAQSV 137

[Close]
BLAST of Cp4.1LG04g13180 vs. NCBI nr
Match: gi|1009105372|ref|XP_015877557.1| (PREDICTED: uncharacterized protein LOC107413704 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-45
Identity = 108/160 (67.50%), Postives = 120/160 (75.00%), Query Frame = 1 

Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDK 60
           MPIN  STPPP+IGKIGPYTVFMTPPSTP PA+  QPVF+SPKKV+ PPPVQPPPQQFDK
Sbjct: 1   MPINGNSTPPPVIGKIGPYTVFMTPPSTPKPAA--QPVFDSPKKVV-PPPVQPPPQQFDK 60

Query: 61  SVSVA-GVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDDHLA 120
           S++V+  V +G  SV GFF+NAV+KVQN                      AHSSLDDHLA
Sbjct: 61  SIAVSDSVADG--SVLGFFKNAVNKVQN----------------------AHSSLDDHLA 120

Query: 121 RWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           RWFGLNQSKYQWALDDYYESKG+E G  K KE S+K QSV
Sbjct: 121 RWFGLNQSKYQWALDDYYESKGLEKGGTKTKEMSTKMQSV 133

[Close]
BLAST of Cp4.1LG04g13180 vs. NCBI nr
Match: gi|802615304|ref|XP_012075117.1| (PREDICTED: uncharacterized protein LOC105636452 [Jatropha curcas])

HSP 1 Score: 184.1 bits (466), Expect = 1.9e-43
Identity = 104/160 (65.00%), Postives = 115/160 (71.88%), Query Frame = 1 

Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFD 60
           MPIN + STPPP+IGKIGPYTVFMTPPSTP PA   QPVF SPKKV+ PPPVQPPP Q +
Sbjct: 1   MPINKDPSTPPPMIGKIGPYTVFMTPPSTPKPAEMDQPVFHSPKKVVSPPPVQPPPPQIE 60

Query: 61  KSVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAHSSLDDHLA 120
           KSVSV  + +G  SV+ FFRNAV+KVQN                      AHSSLD+HLA
Sbjct: 61  KSVSVHSLSDG--SVSEFFRNAVTKVQN----------------------AHSSLDEHLA 120

Query: 121 RWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           RWFGLNQSKYQWALDDYYE+K +   D KAKE SSK QSV
Sbjct: 121 RWFGLNQSKYQWALDDYYENKELGKEDAKAKEMSSKVQSV 136

[Close]
BLAST of Cp4.1LG04g13180 vs. NCBI nr
Match: gi|743930342|ref|XP_011009417.1| (PREDICTED: uncharacterized protein LOC105114548 [Populus euphratica])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 106/168 (63.10%), Postives = 116/168 (69.05%), Query Frame = 1 

Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSPASPPQ--------PVFESPKKVIQPPPV 60
           MPIN + STPPP+IGKIGPYTVF+TPPSTPSP S           PVF+SPKKV+ PPPV
Sbjct: 1   MPINKDPSTPPPMIGKIGPYTVFVTPPSTPSPKSTATAAANESTFPVFDSPKKVVSPPPV 60

Query: 61  QPPPQQFDKSVSVAGVGNGNASVAGFFRNAVSKVQNVFLALLLHVLPLFLVFFVVAIIAH 120
           QPPPQQ DKSV    V +G  SV G F+NAV+KVQN                      AH
Sbjct: 61  QPPPQQIDKSVYSHQVSDG--SVLGLFKNAVNKVQN----------------------AH 120

Query: 121 SSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV 160
           SSLDDHLARWFGLNQSKYQWALDDYYE+KG+E G  KAKE SSK QSV
Sbjct: 121 SSLDDHLARWFGLNQSKYQWALDDYYETKGLEKGGAKAKEISSKVQSV 144

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g13180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g13180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUN3_CUCSA2.2e-5978.62Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423260 PE=4 SV=1[more]
V4U164_9ROSI9.4e-4264.42Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009829mg PE=4 SV=1[more]
A0A061GXK7_THECC3.6e-4161.68Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_039162... [more]
A0A0B0PD50_GOSAR4.0e-4060.00Uncharacterized protein OS=Gossypium arboreum GN=F383_30240 PE=4 SV=1[more]
A0A059CJV6_EUCGR2.6e-3959.75Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00145 PE=4 SV=1[more]
BLAST of Cp4.1LG04g13180 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18910.12.0e-3555.63 hydroxyproline-rich glycoprotein family protein[more]
BLAST of Cp4.1LG04g13180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107262|ref|XP_008453592.1|1.4e-5979.25PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo][more]
gi|449457179|ref|XP_004146326.1|3.2e-5978.62PREDICTED: wiskott-Aldrich syndrome protein family member 2 [Cucumis sativus][more]
gi|1009105372|ref|XP_015877557.1|1.2e-4567.50PREDICTED: uncharacterized protein LOC107413704 isoform X1 [Ziziphus jujuba][more]
gi|802615304|ref|XP_012075117.1|1.9e-4365.00PREDICTED: uncharacterized protein LOC105636452 [Jatropha curcas][more]
gi|743930342|ref|XP_011009417.1|1.6e-4263.10PREDICTED: uncharacterized protein LOC105114548 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g13180.1Cp4.1LG04g13180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37376FAMILY NOT NAMEDcoord: 109..159
score: 3.2E-45coord: 1..86
score: 3.2
NoneNo IPR availablePANTHERPTHR37376:SF1SUBFAMILY NOT NAMEDcoord: 109..159
score: 3.2E-45coord: 1..86
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g13180Cucsa.081190Cucumber (Gy14) v1cgycpeB0142
Cp4.1LG04g13180CmaCh10G003890Cucurbita maxima (Rimu)cmacpeB092
Cp4.1LG04g13180CmaCh11G003820Cucurbita maxima (Rimu)cmacpeB153
Cp4.1LG04g13180CmoCh11G003790Cucurbita moschata (Rifu)cmocpeB129
Cp4.1LG04g13180CmoCh10G004160Cucurbita moschata (Rifu)cmocpeB068
Cp4.1LG04g13180Cla018841Watermelon (97103) v1cpewmB679
Cp4.1LG04g13180Csa1G423260Cucumber (Chinese Long) v2cpecuB637
Cp4.1LG04g13180MELO3C017451Melon (DHL92) v3.5.1cpemeB615
Cp4.1LG04g13180ClCG06G013460Watermelon (Charleston Gray)cpewcgB616
Cp4.1LG04g13180CSPI01G20390Wild cucumber (PI 183967)cpecpiB641
Cp4.1LG04g13180Lsi06G011880Bottle gourd (USVL1VR-Ls)cpelsiB556
Cp4.1LG04g13180MELO3C017451.2Melon (DHL92) v3.6.1cpemedB727
Cp4.1LG04g13180CsaV3_1G031720Cucumber (Chinese Long) v3cpecucB0797
Cp4.1LG04g13180Bhi02G000557Wax gourdcpewgoB0896
Cp4.1LG04g13180CsGy1G020200Cucumber (Gy14) v2cgybcpeB110
Cp4.1LG04g13180Carg15234Silver-seed gourdcarcpeB1106
Cp4.1LG04g13180Carg09034Silver-seed gourdcarcpeB0847
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g13180Cp4.1LG18g06350Cucurbita pepo (Zucchini)cpecpeB360
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g13180Silver-seed gourdcarcpeB0084
Cp4.1LG04g13180Cucumber (Chinese Long) v3cpecucB0827
Cp4.1LG04g13180Cucumber (Chinese Long) v3cpecucB0830
Cp4.1LG04g13180Cucurbita pepo (Zucchini)cpecpeB129
Cp4.1LG04g13180Cucurbita pepo (Zucchini)cpecpeB499
Cp4.1LG04g13180Cucumber (Gy14) v1cgycpeB0176
Cp4.1LG04g13180Cucurbita maxima (Rimu)cmacpeB195
Cp4.1LG04g13180Cucurbita maxima (Rimu)cmacpeB782
Cp4.1LG04g13180Cucurbita moschata (Rifu)cmocpeB168
Cp4.1LG04g13180Cucurbita moschata (Rifu)cmocpeB736
Cp4.1LG04g13180Wild cucumber (PI 183967)cpecpiB669
Cp4.1LG04g13180Cucumber (Chinese Long) v2cpecuB666
Cp4.1LG04g13180Bottle gourd (USVL1VR-Ls)cpelsiB530
Cp4.1LG04g13180Watermelon (Charleston Gray)cpewcgB587
Cp4.1LG04g13180Watermelon (97103) v1cpewmB677
Cp4.1LG04g13180Cucumber (Gy14) v2cgybcpeB233
Cp4.1LG04g13180Cucumber (Gy14) v2cgybcpeB236